Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
18:34:02 (5506): wrapper (7.7.26015): starting
18:34:02 (5506): wrapper: running run_atlas (--nthreads 8)
[2025-11-19 18:34:02] Arguments: --nthreads 8
[2025-11-19 18:34:02] Threads: 8
[2025-11-19 18:34:02] Checking for CVMFS
[2025-11-19 18:34:02] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-19 18:34:03] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-19 18:34:03] Running cvmfs_config stat atlas.cern.ch
[2025-11-19 18:34:05] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-19 18:34:05] 2.11.2.0 22848 275560 146692 153052 2 221 21509594 25165825 4632 130560 2 141423532 99.885 76284568 3084 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-11-19 18:34:05] CVMFS is ok
[2025-11-19 18:34:05] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-19 18:34:05] Checking for apptainer binary...
[2025-11-19 18:34:05] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-19 18:34:05] Running /usr/bin/apptainer --version
[2025-11-19 18:34:05] apptainer version 1.3.2-1.el7
[2025-11-19 18:34:05] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-19 18:34:13] cg-vwn482.simple-grid.lan
[2025-11-19 18:34:13] apptainer works
[2025-11-19 18:34:13] Set ATHENA_PROC_NUMBER=8
[2025-11-19 18:34:13] Set ATHENA_CORE_NUMBER=8
[2025-11-19 18:34:13] Starting ATLAS job with PandaID=6891577905
[2025-11-19 18:34:13] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-20 17:26:52]  *** The last 200 lines of the pilot log: ***
[2025-11-20 17:26:52] 2025-11-20 16:26:04,072 | INFO     | time since job start (82079s) is within the limit (172800.0s)
[2025-11-20 17:26:52] 2025-11-20 16:26:06,078 | INFO     | time since job start (82081s) is within the limit (172800.0s)
[2025-11-20 17:26:52] 2025-11-20 16:26:06,196 | INFO     | monitor loop #5489: job 0:6891577905 is in state 'finished'
[2025-11-20 17:26:52] 2025-11-20 16:26:06,196 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-20 17:26:52] 2025-11-20 16:26:08,094 | INFO     | time since job start (82083s) is within the limit (172800.0s)
[2025-11-20 17:26:52] 2025-11-20 16:26:08,702 | INFO     | monitor loop #5490: job 0:6891577905 is in state 'finished'
[2025-11-20 17:26:52] 2025-11-20 16:26:08,702 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-20 17:26:52] 2025-11-20 16:26:10,102 | INFO     | time since job start (82085s) is within the limit (172800.0s)
[2025-11-20 17:26:52] 2025-11-20 16:26:11,207 | INFO     | monitor loop #5491: job 0:6891577905 is in state 'finished'
[2025-11-20 17:26:52] 2025-11-20 16:26:11,207 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-20 17:26:52] 2025-11-20 16:26:12,114 | INFO     | time since job start (82087s) is within the limit (172800.0s)
[2025-11-20 17:26:52] 2025-11-20 16:26:13,713 | INFO     | monitor loop #5492: job 0:6891577905 is in state 'finished'
[2025-11-20 17:26:52] 2025-11-20 16:26:13,713 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-20 17:26:52] 2025-11-20 16:26:14,122 | INFO     | time since job start (82089s) is within the limit (172800.0s)
[2025-11-20 17:26:52] 2025-11-20 16:26:14,708 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-20 17:26:52] 2025-11-20 16:26:14,709 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 2249.998
[2025-11-20 17:26:52] 2025-11-20 16:26:14,711 | INFO     | using path: /var/lib/boinc/slots/1/PanDA_Pilot-6891577905/memory_monitor_summary.json (trf name=prmon)
[2025-11-20 17:26:52] 2025-11-20 16:26:14,712 | INFO     | extracted standard info from prmon json
[2025-11-20 17:26:52] 2025-11-20 16:26:14,712 | INFO     | extracted standard memory fields from prmon json
[2025-11-20 17:26:52] 2025-11-20 16:26:14,712 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-20 17:26:52] 2025-11-20 16:26:14,736 | INFO     | fitting pss+swap vs Time
[2025-11-20 17:26:52] 2025-11-20 16:26:14,738 | INFO     | sum of square deviations: 749438828406.3481
[2025-11-20 17:26:52] 2025-11-20 16:26:14,783 | INFO     | sum of deviations: 1688653277671.0017
[2025-11-20 17:26:52] 2025-11-20 16:26:14,783 | INFO     | mean x: 1763614919.5484352
[2025-11-20 17:26:52] 2025-11-20 16:26:14,783 | INFO     | mean y: 2860337.4538002983
[2025-11-20 17:26:52] 2025-11-20 16:26:14,783 | INFO     | intersect: -3970958474.119959
[2025-11-20 17:26:52] 2025-11-20 16:26:14,785 | INFO     | chi2: 15.716130149732953
[2025-11-20 17:26:52] 2025-11-20 16:26:14,787 | INFO     | sum of square deviations: 741093696408.3354
[2025-11-20 17:26:52] 2025-11-20 16:26:14,833 | INFO     | sum of deviations: 2130108484742.7322
[2025-11-20 17:26:52] 2025-11-20 16:26:14,833 | INFO     | mean x: 1763614767.052356
[2025-11-20 17:26:52] 2025-11-20 16:26:14,833 | INFO     | mean y: 2868403.4038893045
[2025-11-20 17:26:52] 2025-11-20 16:26:14,833 | INFO     | intersect: -5066248763.996629
[2025-11-20 17:26:52] 2025-11-20 16:26:14,835 | INFO     | chi2: 12.538583921421782
[2025-11-20 17:26:52] 2025-11-20 16:26:14,835 | INFO     | current chi2=12.538583921421782 (change=20.218375630881134 %)
[2025-11-20 17:26:52] 2025-11-20 16:26:14,835 | INFO     | right removable region: 1336
[2025-11-20 17:26:52] 2025-11-20 16:26:14,837 | INFO     | sum of square deviations: 741092838138.3345
[2025-11-20 17:26:52] 2025-11-20 16:26:14,883 | INFO     | sum of deviations: 1270498947424.25
[2025-11-20 17:26:52] 2025-11-20 16:26:14,884 | INFO     | mean x: 1763615072.052356
[2025-11-20 17:26:52] 2025-11-20 16:26:14,884 | INFO     | mean y: 2867975.110695587
[2025-11-20 17:26:52] 2025-11-20 16:26:14,884 | INFO     | intersect: -3020600850.1079493
[2025-11-20 17:26:52] 2025-11-20 16:26:14,885 | INFO     | chi2: 13.189852059791582
[2025-11-20 17:26:52] 2025-11-20 16:26:14,886 | INFO     | current chi2=13.189852059791582 (change=16.074428411273352 %)
[2025-11-20 17:26:52] 2025-11-20 16:26:14,886 | INFO     | left removable region: 10
[2025-11-20 17:26:52] 2025-11-20 16:26:14,888 | INFO     | sum of square deviations: 722951585537.0281
[2025-11-20 17:26:52] 2025-11-20 16:26:14,937 | INFO     | sum of deviations: 1699096778658.3835
[2025-11-20 17:26:52] 2025-11-20 16:26:14,938 | INFO     | mean x: 1763615041.5580695
[2025-11-20 17:26:52] 2025-11-20 16:26:14,938 | INFO     | mean y: 2880205.0859728507
[2025-11-20 17:26:52] 2025-11-20 16:26:14,938 | INFO     | intersect: -4142006805.1262894
[2025-11-20 17:26:52] 2025-11-20 16:26:14,940 | INFO     | chi2: 8.971422523064678
[2025-11-20 17:26:52] 2025-11-20 16:26:14,940 | INFO     | current memory leak: 2.35 B/s (using 1326 data points, chi2=8.97)
[2025-11-20 17:26:52] 2025-11-20 16:26:14,942 | INFO     | could have reported an average CPU frequency of 2249 MHz (45 samples)
[2025-11-20 17:26:52] 2025-11-20 16:26:14,942 | INFO     | ..............................
[2025-11-20 17:26:52] 2025-11-20 16:26:14,942 | INFO     | . Timing measurements:
[2025-11-20 17:26:52] 2025-11-20 16:26:14,942 | INFO     | . get job = 0 s
[2025-11-20 17:26:52] 2025-11-20 16:26:14,942 | INFO     | . initial setup = 4 s
[2025-11-20 17:26:52] 2025-11-20 16:26:14,943 | INFO     | . payload setup = 14 s
[2025-11-20 17:26:52] 2025-11-20 16:26:14,943 | INFO     | . stage-in = 0 s
[2025-11-20 17:26:52] 2025-11-20 16:26:14,943 | INFO     | . payload execution = 81867 s
[2025-11-20 17:26:52] 2025-11-20 16:26:14,943 | INFO     | . stage-out = 7 s
[2025-11-20 17:26:52] 2025-11-20 16:26:14,943 | INFO     | . log creation = 2 s
[2025-11-20 17:26:52] 2025-11-20 16:26:14,943 | INFO     | ..............................
[2025-11-20 17:26:52] 2025-11-20 16:26:15,064 | INFO     | 
[2025-11-20 17:26:52] 2025-11-20 16:26:15,064 | INFO     | job summary report
[2025-11-20 17:26:52] 2025-11-20 16:26:15,064 | INFO     | --------------------------------------------------
[2025-11-20 17:26:52] 2025-11-20 16:26:15,064 | INFO     | PanDA job id: 6891577905
[2025-11-20 17:26:52] 2025-11-20 16:26:15,064 | INFO     | task id: 47493068
[2025-11-20 17:26:52] 2025-11-20 16:26:15,064 | INFO     | errors: (none)
[2025-11-20 17:26:52] 2025-11-20 16:26:15,065 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-20 17:26:52] 2025-11-20 16:26:15,065 | INFO     | pilot state: finished 
[2025-11-20 17:26:52] 2025-11-20 16:26:15,065 | INFO     | transexitcode: 0
[2025-11-20 17:26:52] 2025-11-20 16:26:15,065 | INFO     | exeerrorcode: 0
[2025-11-20 17:26:52] 2025-11-20 16:26:15,065 | INFO     | exeerrordiag: 
[2025-11-20 17:26:52] 2025-11-20 16:26:15,065 | INFO     | exitcode: 0
[2025-11-20 17:26:52] 2025-11-20 16:26:15,065 | INFO     | exitmsg: OK
[2025-11-20 17:26:52] 2025-11-20 16:26:15,065 | INFO     | cpuconsumptiontime: 306594 s
[2025-11-20 17:26:52] 2025-11-20 16:26:15,065 | INFO     | nevents: 1000
[2025-11-20 17:26:52] 2025-11-20 16:26:15,065 | INFO     | neventsw: 0
[2025-11-20 17:26:52] 2025-11-20 16:26:15,065 | INFO     | pid: 15918
[2025-11-20 17:26:52] 2025-11-20 16:26:15,065 | INFO     | pgrp: 15918
[2025-11-20 17:26:52] 2025-11-20 16:26:15,065 | INFO     | corecount: 8
[2025-11-20 17:26:52] 2025-11-20 16:26:15,066 | INFO     | event service: False
[2025-11-20 17:26:52] 2025-11-20 16:26:15,066 | INFO     | sizes: {0: 2296973, 1: 2297057, 2: 2297256, 12: 2297256, 23: 2297284, 34: 2297312, 45: 2297468, 55: 2297496, 66: 2297524, 77: 2297552, 86: 2297870, 88: 2298178, 81
[2025-11-20 17:26:52] 2025-11-20 16:26:15,066 | INFO     | --------------------------------------------------
[2025-11-20 17:26:52] 2025-11-20 16:26:15,066 | INFO     | 
[2025-11-20 17:26:52] 2025-11-20 16:26:15,066 | INFO     | executing command: ls -lF /var/lib/boinc/slots/1
[2025-11-20 17:26:52] 2025-11-20 16:26:15,703 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-20 17:26:52] 2025-11-20 16:26:15,703 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-20 17:26:52] 2025-11-20 16:26:15,703 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-20 17:26:52] 2025-11-20 16:26:15,703 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-20 17:26:52] 2025-11-20 16:26:15,703 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-20 17:26:52] 2025-11-20 16:26:15,703 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-20 17:26:52] 2025-11-20 16:26:15,703 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-20 17:26:52] 2025-11-20 16:26:15,703 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-20 17:26:52] 2025-11-20 16:26:15,704 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-20 17:26:52] 2025-11-20 16:26:15,704 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-20 17:26:52] 2025-11-20 16:26:15,704 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-20 17:26:52] 2025-11-20 16:26:15,704 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-20 17:26:52] 2025-11-20 16:26:15,704 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-20 17:26:52] 2025-11-20 16:26:15,704 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-20 17:26:52] 2025-11-20 16:26:15,704 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-20 17:26:52] 2025-11-20 16:26:15,704 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-20 17:26:52] 2025-11-20 16:26:15,704 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-20 17:26:52] 2025-11-20 16:26:15,704 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-20 17:26:52] 2025-11-20 16:26:15,704 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-20 17:26:52] 2025-11-20 16:26:15,704 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-20 17:26:52] 2025-11-20 16:26:15,705 | INFO     | job 6891577905 has completed (purged errors)
[2025-11-20 17:26:52] 2025-11-20 16:26:15,705 | INFO     | overall cleanup function is called
[2025-11-20 17:26:52] 2025-11-20 16:26:16,727 | INFO     | --- collectZombieJob: --- 10, [15918]
[2025-11-20 17:26:52] 2025-11-20 16:26:16,727 | INFO     | zombie collector waiting for pid 15918
[2025-11-20 17:26:52] 2025-11-20 16:26:16,727 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-20 17:26:52] 2025-11-20 16:26:16,727 | INFO     | collected zombie processes
[2025-11-20 17:26:52] 2025-11-20 16:26:16,727 | INFO     | will attempt to kill all subprocesses of pid=15918
[2025-11-20 17:26:52] 2025-11-20 16:26:16,826 | INFO     | process IDs to be killed: [15918] (in reverse order)
[2025-11-20 17:26:52] 2025-11-20 16:26:17,676 | WARNING  | found no corresponding commands to process id(s)
[2025-11-20 17:26:52] 2025-11-20 16:26:17,676 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-20 17:26:52] 2025-11-20 16:26:17,680 | INFO     | did not find any defunct processes belonging to 15918
[2025-11-20 17:26:52] 2025-11-20 16:26:17,683 | INFO     | did not find any defunct processes belonging to 15918
[2025-11-20 17:26:52] 2025-11-20 16:26:17,742 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-20 17:26:52] 2025-11-20 16:26:17,743 | INFO     | ready for new job
[2025-11-20 17:26:52] 2025-11-20 16:26:17,743 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-20 17:26:52] 2025-11-20 16:26:17,749 | INFO     | ***************************************
[2025-11-20 17:26:52] 2025-11-20 16:26:17,749 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-20 17:26:52] 2025-11-20 16:26:17,749 | INFO     | ***************************************
[2025-11-20 17:26:52] 2025-11-20 16:26:17,749 | INFO     | 
[2025-11-20 17:26:52] 2025-11-20 16:26:17,750 | INFO     | pilot is running in a VM
[2025-11-20 17:26:52] 2025-11-20 16:26:17,750 | INFO     | architecture information:
[2025-11-20 17:26:52] 2025-11-20 16:26:17,761 | INFO     | executing command: cat /etc/os-release
[2025-11-20 17:26:52] 2025-11-20 16:26:17,919 | INFO     | cat /etc/os-release:
[2025-11-20 17:26:52] NAME="CentOS Linux"
[2025-11-20 17:26:52] VERSION="7 (Core)"
[2025-11-20 17:26:52] ID="centos"
[2025-11-20 17:26:52] ID_LIKE="rhel fedora"
[2025-11-20 17:26:52] VERSION_ID="7"
[2025-11-20 17:26:52] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-20 17:26:52] ANSI_COLOR="0;31"
[2025-11-20 17:26:52] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-20 17:26:52] HOME_URL="https://www.centos.org/"
[2025-11-20 17:26:52] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-20 17:26:52] 
[2025-11-20 17:26:52] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-20 17:26:52] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-20 17:26:52] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-20 17:26:52] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-20 17:26:52] 
[2025-11-20 17:26:52] 2025-11-20 16:26:17,920 | INFO     | ***************************************
[2025-11-20 17:26:52] 2025-11-20 16:26:18,423 | INFO     | executing command: df -mP /var/lib/boinc/slots/1
[2025-11-20 17:26:52] 2025-11-20 16:26:18,719 | INFO     | sufficient remaining disk space (495138635776 B)
[2025-11-20 17:26:52] 2025-11-20 16:26:18,720 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-20 17:26:52] 2025-11-20 16:26:18,720 | INFO     | current server update state: UPDATING_FINAL
[2025-11-20 17:26:52] 2025-11-20 16:26:18,720 | INFO     | update_server=False
[2025-11-20 17:26:52] 2025-11-20 16:26:18,720 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-20 17:26:52] 2025-11-20 16:26:18,783 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-20 17:26:52] 2025-11-20 16:26:18,783 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-20 17:26:52] 2025-11-20 16:26:18,784 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-20 17:26:52] 2025-11-20 16:26:18,784 | INFO     | will abort loop
[2025-11-20 17:26:52] 2025-11-20 16:26:18,924 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-20 17:26:52] 2025-11-20 16:26:19,373 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-20 17:26:52] 2025-11-20 16:26:19,697 | INFO     | all job control threads have been joined
[2025-11-20 17:26:52] 2025-11-20 16:26:19,701 | INFO     | all data control threads have been joined
[2025-11-20 17:26:52] 2025-11-20 16:26:19,726 | INFO     | [job] retrieve thread has finished
[2025-11-20 17:26:52] 2025-11-20 16:26:19,789 | INFO     | [job] job monitor thread has finished
[2025-11-20 17:26:52] 2025-11-20 16:26:20,085 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-20 17:26:52] 2025-11-20 16:26:20,139 | INFO     | all payload control threads have been joined
[2025-11-20 17:26:52] 2025-11-20 16:26:20,175 | INFO     | [job] create_data_payload thread has finished
[2025-11-20 17:26:52] 2025-11-20 16:26:20,219 | INFO     | [data] copytool_in thread has finished
[2025-11-20 17:26:52] 2025-11-20 16:26:20,342 | INFO     | [payload] validate_pre thread has finished
[2025-11-20 17:26:52] 2025-11-20 16:26:20,674 | INFO     | [job] validate thread has finished
[2025-11-20 17:26:52] 2025-11-20 16:26:20,703 | INFO     | [job] control thread has finished
[2025-11-20 17:26:52] 2025-11-20 16:26:20,707 | INFO     | [data] control thread has finished
[2025-11-20 17:26:52] 2025-11-20 16:26:21,091 | INFO     | [job] queue monitor thread has finished
[2025-11-20 17:26:52] 2025-11-20 16:26:21,108 | INFO     | [payload] validate_post thread has finished
[2025-11-20 17:26:52] 2025-11-20 16:26:21,145 | INFO     | [payload] control thread has finished
[2025-11-20 17:26:52] 2025-11-20 16:26:21,152 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-20 17:26:52] 2025-11-20 16:26:21,197 | INFO     | [payload] execute_payloads thread has finished
[2025-11-20 17:26:52] 2025-11-20 16:26:21,233 | INFO     | [payload] failed_post thread has finished
[2025-11-20 17:26:52] 2025-11-20 16:26:21,380 | INFO     | [data] copytool_out thread has finished
[2025-11-20 17:26:52] 2025-11-20 16:26:22,933 | INFO     | [data] queue_monitor thread has finished
[2025-11-20 17:26:52] 2025-11-20 16:26:28,195 | INFO     | [monitor] cgroup control has ended
[2025-11-20 17:26:52] 2025-11-20 16:26:29,006 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140192221783872)>', '<ExcThread(monitor, started 140191801001728)>']
[2025-11-20 17:26:52] 2025-11-20 16:26:34,032 | INFO     | all workflow threads have been joined
[2025-11-20 17:26:52] 2025-11-20 16:26:34,033 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-20 17:26:52] 2025-11-20 16:26:34,033 | INFO     | traces error code: 0
[2025-11-20 17:26:52] 2025-11-20 16:26:34,033 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-20 17:26:52] 2025-11-20 16:26:47,332 | INFO     | PID=9302 has CPU usage=1.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-11-20 17:26:52] 2025-11-20 16:26:47,333 | INFO     | .. there are 9 such processes running
[2025-11-20 17:26:52] 2025-11-20 16:26:47,333 | INFO     | found 0 job(s) in 20 queues
[2025-11-20 17:26:52] 2025-11-20 16:26:47,333 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-20 17:26:52] 2025-11-20 16:26:47,333 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-20 17:26:52] 2025-11-20 16:26:47,333 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-20 17:26:52] 2025-11-20 16:26:47,333 | INFO     | [monitor] control thread has ended
[2025-11-20 17:26:52] 2025-11-20 16:26:47,809 [wrapper] ==== pilot stdout END ====
[2025-11-20 17:26:52] 2025-11-20 16:26:47,913 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-20 17:26:52] 2025-11-20 16:26:48,003 [wrapper] pilotpid: 9302
[2025-11-20 17:26:52] 2025-11-20 16:26:48,098 [wrapper] Pilot exit status: 0
[2025-11-20 17:26:52] 2025-11-20 16:26:48,547 [wrapper] pandaids: 6891577905
[2025-11-20 17:26:52] 2025-11-20 16:26:49,342 [wrapper] cleanup supervisor_pilot 24531 9303
[2025-11-20 17:26:52] 2025-11-20 16:26:49,453 [wrapper] Test setup, not cleaning
[2025-11-20 17:26:52] 2025-11-20 16:26:49,570 [wrapper] apfmon messages muted
[2025-11-20 17:26:52] 2025-11-20 16:26:49,645 [wrapper] ==== wrapper stdout END ====
[2025-11-20 17:26:52] 2025-11-20 16:26:49,770 [wrapper] ==== wrapper stderr END ====
[2025-11-20 17:26:52]  *** Error codes and diagnostics ***
[2025-11-20 17:26:52]     "exeErrorCode": 0,
[2025-11-20 17:26:52]     "exeErrorDiag": "",
[2025-11-20 17:26:52]     "pilotErrorCode": 0,
[2025-11-20 17:26:52]     "pilotErrorDiag": "",
[2025-11-20 17:26:52]  *** Listing of results directory ***
[2025-11-20 17:26:52] total 1337992
[2025-11-20 17:26:52] -rw-r--r--. 1 boinc boinc    576529 Nov 18 17:45 pilot3.tar.gz
[2025-11-20 17:26:52] -rw-r--r--. 1 boinc boinc      5112 Nov 18 17:48 queuedata.json
[2025-11-20 17:26:52] -rwx------. 1 boinc boinc     36292 Nov 18 17:49 runpilot2-wrapper.sh
[2025-11-20 17:26:52] -rw-r--r--. 1 boinc boinc       100 Nov 19 18:34 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-20 17:26:52] -rwxr-xr-x. 1 boinc boinc      7986 Nov 19 18:34 run_atlas
[2025-11-20 17:26:52] -rw-r--r--. 1 boinc boinc       105 Nov 19 18:34 job.xml
[2025-11-20 17:26:52] -rw-r--r--. 1 boinc boinc      6390 Nov 19 18:34 init_data.xml
[2025-11-20 17:26:52] -rw-r--r--. 2 boinc boinc 410706173 Nov 19 18:34 EVNT.47493065._000386.pool.root.1
[2025-11-20 17:26:52] -rw-r--r--. 2 boinc boinc     15120 Nov 19 18:34 start_atlas.sh
[2025-11-20 17:26:52] drwxrwx--x. 2 boinc boinc        68 Nov 19 18:34 shared
[2025-11-20 17:26:52] -rw-r--r--. 2 boinc boinc    590098 Nov 19 18:34 input.tar.gz
[2025-11-20 17:26:52] -rw-r--r--. 1 boinc boinc         0 Nov 19 18:34 boinc_lockfile
[2025-11-20 17:26:52] -rw-r--r--. 1 boinc boinc      2773 Nov 19 18:34 pandaJob.out
[2025-11-20 17:26:52] -rw-------. 1 boinc boinc    989434 Nov 19 18:38 agis_schedconf.cvmfs.json
[2025-11-20 17:26:52] drwx------. 5 boinc boinc      4096 Nov 19 18:38 pilot3
[2025-11-20 17:26:52] -rw-r--r--. 1 boinc boinc       533 Nov 20 16:59 boinc_task_state.xml
[2025-11-20 17:26:52] -rw-------. 1 boinc boinc 928717295 Nov 20 17:23 HITS.47493068._003859.pool.root.1
[2025-11-20 17:26:52] -rw-------. 1 boinc boinc      1032 Nov 20 17:24 memory_monitor_summary.json
[2025-11-20 17:26:52] -rw-------. 1 boinc boinc   1526164 Nov 20 17:24 agis_ddmendpoints.agis.ALL.json
[2025-11-20 17:26:52] -rw-------. 1 boinc boinc   2441873 Nov 20 17:24 log.47493068._003859.job.log.tgz.1
[2025-11-20 17:26:52] -rw-------. 1 boinc boinc        95 Nov 20 17:26 pilot_heartbeat.json
[2025-11-20 17:26:52] -rw-------. 1 boinc boinc      8626 Nov 20 17:26 heartbeat.json
[2025-11-20 17:26:52] -rw-r--r--. 1 boinc boinc      8192 Nov 20 17:26 boinc_mmap_file
[2025-11-20 17:26:52] -rw-r--r--. 1 boinc boinc        29 Nov 20 17:26 wrapper_checkpoint.txt
[2025-11-20 17:26:52] -rw-------. 1 boinc boinc       819 Nov 20 17:26 pilotlog.txt
[2025-11-20 17:26:52] -rw-------. 1 boinc boinc  10941577 Nov 20 17:26 log.47493068._003859.job.log.1
[2025-11-20 17:26:52] -rw-------. 1 boinc boinc       353 Nov 20 17:26 output.list
[2025-11-20 17:26:52] -rw-r--r--. 1 boinc boinc       620 Nov 20 17:26 runtime_log
[2025-11-20 17:26:52] -rw-------. 1 boinc boinc  13404160 Nov 20 17:26 result.tar.gz
[2025-11-20 17:26:52] -rw-------. 1 boinc boinc       662 Nov 20 17:26 xQQLDmd4df8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm8tFKDmza3Jjn.diag
[2025-11-20 17:26:52] -rw-r--r--. 1 boinc boinc      8703 Nov 20 17:26 runtime_log.err
[2025-11-20 17:26:52] -rw-r--r--. 1 boinc boinc     21412 Nov 20 17:26 stderr.txt
[2025-11-20 17:26:52] HITS file was successfully produced:
[2025-11-20 17:26:52] -rw-------. 1 boinc boinc 928717295 Nov 20 17:23 shared/HITS.pool.root.1
[2025-11-20 17:26:52]  *** Contents of shared directory: ***
[2025-11-20 17:26:52] total 1321724
[2025-11-20 17:26:52] -rw-r--r--. 2 boinc boinc 410706173 Nov 19 18:34 ATLAS.root_0
[2025-11-20 17:26:52] -rw-r--r--. 2 boinc boinc     15120 Nov 19 18:34 start_atlas.sh
[2025-11-20 17:26:52] -rw-r--r--. 2 boinc boinc    590098 Nov 19 18:34 input.tar.gz
[2025-11-20 17:26:52] -rw-------. 1 boinc boinc 928717295 Nov 20 17:23 HITS.pool.root.1
[2025-11-20 17:26:52] -rw-------. 1 boinc boinc  13404160 Nov 20 17:26 result.tar.gz
17:26:53 (5506): run_atlas exited; CPU time 307112.850297
17:26:53 (5506): called boinc_finish(0)

</stderr_txt>
]]>

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