Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
22:00:37 (23946): wrapper (7.7.26015): starting
22:00:37 (23946): wrapper: running run_atlas (--nthreads 8)
[2025-11-21 22:00:37] Arguments: --nthreads 8
[2025-11-21 22:00:37] Threads: 8
[2025-11-21 22:00:37] Checking for CVMFS
[2025-11-21 22:00:38] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-21 22:00:39] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-21 22:00:39] Running cvmfs_config stat atlas.cern.ch
[2025-11-21 22:00:40] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-21 22:00:40] 2.11.2.0 20854 165488 136976 153143 0 62 17523594 25165825 4632 130560 2 56013269 99.883 27457824 2562 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-11-21 22:00:40] CVMFS is ok
[2025-11-21 22:00:40] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-21 22:00:40] Checking for apptainer binary...
[2025-11-21 22:00:40] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-21 22:00:40] Running /usr/bin/apptainer --version
[2025-11-21 22:00:41] apptainer version 1.3.2-1.el7
[2025-11-21 22:00:41] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-21 22:00:46] cg-vwn379.simple-grid.lan
[2025-11-21 22:00:46] apptainer works
[2025-11-21 22:00:46] Set ATHENA_PROC_NUMBER=8
[2025-11-21 22:00:46] Set ATHENA_CORE_NUMBER=8
[2025-11-21 22:00:46] Starting ATLAS job with PandaID=6891577903
[2025-11-21 22:00:46] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-22 23:23:55]  *** The last 200 lines of the pilot log: ***
[2025-11-22 23:23:56] 2025-11-22 22:23:16,322 | INFO     | sum of deviations: 2907410663070.8857
[2025-11-22 23:23:56] 2025-11-22 22:23:16,322 | INFO     | mean x: 1763804549.3181515
[2025-11-22 23:23:56] 2025-11-22 22:23:16,323 | INFO     | mean y: 2869524.5391828534
[2025-11-22 23:23:56] 2025-11-22 22:23:16,323 | INFO     | intersect: -4966478636.225157
[2025-11-22 23:23:56] 2025-11-22 22:23:16,325 | INFO     | chi2: 12.418683265129514
[2025-11-22 23:23:56] 2025-11-22 22:23:16,327 | INFO     | sum of square deviations: 1021614466283.1613
[2025-11-22 23:23:56] 2025-11-22 22:23:16,411 | INFO     | time since job start (91210s) is within the limit (172800.0s)
[2025-11-22 23:23:56] 2025-11-22 22:23:16,415 | INFO     | sum of deviations: 3412509004409.062
[2025-11-22 23:23:56] 2025-11-22 22:23:16,416 | INFO     | mean x: 1763804396.8225806
[2025-11-22 23:23:56] 2025-11-22 22:23:16,416 | INFO     | mean y: 2876978.420698925
[2025-11-22 23:23:56] 2025-11-22 22:23:16,416 | INFO     | intersect: -5888776463.089067
[2025-11-22 23:23:56] 2025-11-22 22:23:16,418 | INFO     | chi2: 9.17073452951901
[2025-11-22 23:23:56] 2025-11-22 22:23:16,418 | INFO     | current chi2=9.17073452951901 (change=26.153728751021752 %)
[2025-11-22 23:23:56] 2025-11-22 22:23:16,420 | INFO     | sum of square deviations: 1011351097324.3846
[2025-11-22 23:23:56] 2025-11-22 22:23:16,486 | INFO     | sum of deviations: 3975025761682.3975
[2025-11-22 23:23:56] 2025-11-22 22:23:16,487 | INFO     | mean x: 1763804244.3270397
[2025-11-22 23:23:56] 2025-11-22 22:23:16,487 | INFO     | mean y: 2885336.0775455157
[2025-11-22 23:23:56] 2025-11-22 22:23:16,487 | INFO     | intersect: -6929590762.789976
[2025-11-22 23:23:56] 2025-11-22 22:23:16,489 | INFO     | chi2: 5.285396206978481
[2025-11-22 23:23:56] 2025-11-22 22:23:16,489 | INFO     | current chi2=5.285396206978481 (change=42.366708032320595 %)
[2025-11-22 23:23:56] 2025-11-22 22:23:16,491 | INFO     | sum of square deviations: 1001156706403.0518
[2025-11-22 23:23:56] 2025-11-22 22:23:16,559 | INFO     | sum of deviations: 4371849510468.9185
[2025-11-22 23:23:56] 2025-11-22 22:23:16,559 | INFO     | mean x: 1763804091.8315291
[2025-11-22 23:23:56] 2025-11-22 22:23:16,559 | INFO     | mean y: 2891268.152232747
[2025-11-22 23:23:56] 2025-11-22 22:23:16,560 | INFO     | intersect: -7699285629.949041
[2025-11-22 23:23:56] 2025-11-22 22:23:16,561 | INFO     | chi2: 3.029914794036313
[2025-11-22 23:23:56] 2025-11-22 22:23:16,561 | INFO     | current chi2=3.029914794036313 (change=42.67383796060894 %)
[2025-11-22 23:23:56] 2025-11-22 22:23:16,564 | INFO     | sum of square deviations: 991030700575.3334
[2025-11-22 23:23:56] 2025-11-22 22:23:16,622 | INFO     | sum of deviations: 4431619582770.664
[2025-11-22 23:23:56] 2025-11-22 22:23:16,622 | INFO     | mean x: 1763803939.3333333
[2025-11-22 23:23:56] 2025-11-22 22:23:16,622 | INFO     | mean y: 2892167.2980312286
[2025-11-22 23:23:56] 2025-11-22 22:23:16,622 | INFO     | intersect: -7884359028.0280485
[2025-11-22 23:23:56] 2025-11-22 22:23:16,624 | INFO     | chi2: 2.902557932189999
[2025-11-22 23:23:56] 2025-11-22 22:23:16,624 | INFO     | current chi2=2.902557932189999 (change=4.203314961100117 %)
[2025-11-22 23:23:56] 2025-11-22 22:23:16,625 | INFO     | right removable region: 1472
[2025-11-22 23:23:56] 2025-11-22 22:23:16,627 | INFO     | sum of square deviations: 1021613265803.1613
[2025-11-22 23:23:56] 2025-11-22 22:23:16,686 | INFO     | sum of deviations: 2442045910758.4316
[2025-11-22 23:23:56] 2025-11-22 22:23:16,686 | INFO     | mean x: 1763804701.8225806
[2025-11-22 23:23:56] 2025-11-22 22:23:16,686 | INFO     | mean y: 2876389.558467742
[2025-11-22 23:23:56] 2025-11-22 22:23:16,686 | INFO     | intersect: -4213290533.524765
[2025-11-22 23:23:56] 2025-11-22 22:23:16,688 | INFO     | chi2: 9.890135144384704
[2025-11-22 23:23:56] 2025-11-22 22:23:16,688 | INFO     | current chi2=9.890135144384704 (change=20.360839122491626 %)
[2025-11-22 23:23:56] 2025-11-22 22:23:16,689 | INFO     | left removable region: 10
[2025-11-22 23:23:56] 2025-11-22 22:23:16,691 | INFO     | sum of square deviations: 968993346861.257
[2025-11-22 23:23:56] 2025-11-22 22:23:16,751 | INFO     | sum of deviations: 3849412973560.6294
[2025-11-22 23:23:56] 2025-11-22 22:23:16,752 | INFO     | mean x: 1763804213.8372092
[2025-11-22 23:23:56] 2025-11-22 22:23:16,752 | INFO     | mean y: 2900780.5950752394
[2025-11-22 23:23:56] 2025-11-22 22:23:16,752 | INFO     | intersect: -7003969643.808379
[2025-11-22 23:23:56] 2025-11-22 22:23:16,754 | INFO     | chi2: 0.2593535735864065
[2025-11-22 23:23:56] 2025-11-22 22:23:16,754 | INFO     | current memory leak: 3.97 B/s (using 1462 data points, chi2=0.26)
[2025-11-22 23:23:56] 2025-11-22 22:23:16,757 | INFO     | could have reported an average CPU frequency of 1999 MHz (50 samples)
[2025-11-22 23:23:56] 2025-11-22 22:23:16,757 | INFO     | ..............................
[2025-11-22 23:23:56] 2025-11-22 22:23:16,757 | INFO     | . Timing measurements:
[2025-11-22 23:23:56] 2025-11-22 22:23:16,757 | INFO     | . get job = 0 s
[2025-11-22 23:23:56] 2025-11-22 22:23:16,757 | INFO     | . initial setup = 3 s
[2025-11-22 23:23:56] 2025-11-22 22:23:16,757 | INFO     | . payload setup = 11 s
[2025-11-22 23:23:56] 2025-11-22 22:23:16,757 | INFO     | . stage-in = 0 s
[2025-11-22 23:23:56] 2025-11-22 22:23:16,758 | INFO     | . payload execution = 91067 s
[2025-11-22 23:23:56] 2025-11-22 22:23:16,758 | INFO     | . stage-out = 6 s
[2025-11-22 23:23:56] 2025-11-22 22:23:16,758 | INFO     | . log creation = 2 s
[2025-11-22 23:23:56] 2025-11-22 22:23:16,758 | INFO     | ..............................
[2025-11-22 23:23:56] 2025-11-22 22:23:16,875 | INFO     | 
[2025-11-22 23:23:56] 2025-11-22 22:23:16,875 | INFO     | job summary report
[2025-11-22 23:23:56] 2025-11-22 22:23:16,876 | INFO     | --------------------------------------------------
[2025-11-22 23:23:56] 2025-11-22 22:23:16,876 | INFO     | PanDA job id: 6891577903
[2025-11-22 23:23:56] 2025-11-22 22:23:16,876 | INFO     | task id: 47493068
[2025-11-22 23:23:56] 2025-11-22 22:23:16,876 | INFO     | errors: (none)
[2025-11-22 23:23:56] 2025-11-22 22:23:16,876 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-22 23:23:56] 2025-11-22 22:23:16,876 | INFO     | pilot state: finished 
[2025-11-22 23:23:56] 2025-11-22 22:23:16,876 | INFO     | transexitcode: 0
[2025-11-22 23:23:56] 2025-11-22 22:23:16,876 | INFO     | exeerrorcode: 0
[2025-11-22 23:23:56] 2025-11-22 22:23:16,876 | INFO     | exeerrordiag: 
[2025-11-22 23:23:56] 2025-11-22 22:23:16,876 | INFO     | exitcode: 0
[2025-11-22 23:23:56] 2025-11-22 22:23:16,877 | INFO     | exitmsg: OK
[2025-11-22 23:23:56] 2025-11-22 22:23:16,877 | INFO     | cpuconsumptiontime: 338710 s
[2025-11-22 23:23:56] 2025-11-22 22:23:16,877 | INFO     | nevents: 1000
[2025-11-22 23:23:56] 2025-11-22 22:23:16,877 | INFO     | neventsw: 0
[2025-11-22 23:23:56] 2025-11-22 22:23:16,877 | INFO     | pid: 1933
[2025-11-22 23:23:56] 2025-11-22 22:23:16,877 | INFO     | pgrp: 1933
[2025-11-22 23:23:56] 2025-11-22 22:23:16,877 | INFO     | corecount: 8
[2025-11-22 23:23:56] 2025-11-22 22:23:16,877 | INFO     | event service: False
[2025-11-22 23:23:56] 2025-11-22 22:23:16,877 | INFO     | sizes: {0: 2298625, 1: 2298824, 10: 2299086, 12: 2299114, 91079: 2363038, 91086: 2372216, 91188: 2372406}
[2025-11-22 23:23:56] 2025-11-22 22:23:16,877 | INFO     | --------------------------------------------------
[2025-11-22 23:23:56] 2025-11-22 22:23:16,877 | INFO     | 
[2025-11-22 23:23:56] 2025-11-22 22:23:16,878 | INFO     | executing command: ls -lF /var/lib/boinc/slots/3
[2025-11-22 23:23:56] 2025-11-22 22:23:16,922 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-22 23:23:56] 2025-11-22 22:23:16,922 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-22 23:23:56] 2025-11-22 22:23:16,922 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-22 23:23:56] 2025-11-22 22:23:16,922 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-22 23:23:56] 2025-11-22 22:23:16,922 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-22 23:23:56] 2025-11-22 22:23:16,922 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-22 23:23:56] 2025-11-22 22:23:16,923 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-22 23:23:56] 2025-11-22 22:23:16,923 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-22 23:23:56] 2025-11-22 22:23:16,923 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-22 23:23:56] 2025-11-22 22:23:16,923 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-22 23:23:56] 2025-11-22 22:23:16,923 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-22 23:23:56] 2025-11-22 22:23:16,923 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-22 23:23:56] 2025-11-22 22:23:16,923 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-22 23:23:56] 2025-11-22 22:23:16,923 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-22 23:23:56] 2025-11-22 22:23:16,923 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-22 23:23:56] 2025-11-22 22:23:16,924 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-22 23:23:56] 2025-11-22 22:23:16,924 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-22 23:23:56] 2025-11-22 22:23:16,924 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-22 23:23:56] 2025-11-22 22:23:16,924 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-22 23:23:56] 2025-11-22 22:23:16,924 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-22 23:23:56] 2025-11-22 22:23:16,924 | INFO     | job 6891577903 has completed (purged errors)
[2025-11-22 23:23:56] 2025-11-22 22:23:16,925 | INFO     | overall cleanup function is called
[2025-11-22 23:23:56] 2025-11-22 22:23:17,564 | INFO     | PID=27798 has CPU usage=3.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-22 23:23:56] 2025-11-22 22:23:17,565 | INFO     | .. there are 9 such processes running
[2025-11-22 23:23:56] 2025-11-22 22:23:17,944 | INFO     | --- collectZombieJob: --- 10, [1933]
[2025-11-22 23:23:56] 2025-11-22 22:23:17,945 | INFO     | zombie collector waiting for pid 1933
[2025-11-22 23:23:56] 2025-11-22 22:23:17,945 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-22 23:23:56] 2025-11-22 22:23:17,945 | INFO     | collected zombie processes
[2025-11-22 23:23:56] 2025-11-22 22:23:17,945 | INFO     | will attempt to kill all subprocesses of pid=1933
[2025-11-22 23:23:56] 2025-11-22 22:23:18,063 | INFO     | process IDs to be killed: [1933] (in reverse order)
[2025-11-22 23:23:56] 2025-11-22 22:23:18,894 | WARNING  | found no corresponding commands to process id(s)
[2025-11-22 23:23:56] 2025-11-22 22:23:18,895 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-22 23:23:56] 2025-11-22 22:23:18,898 | INFO     | did not find any defunct processes belonging to 1933
[2025-11-22 23:23:56] 2025-11-22 22:23:18,901 | INFO     | did not find any defunct processes belonging to 1933
[2025-11-22 23:23:56] 2025-11-22 22:23:18,904 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-22 23:23:56] 2025-11-22 22:23:18,905 | INFO     | ready for new job
[2025-11-22 23:23:56] 2025-11-22 22:23:18,905 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-22 23:23:56] 2025-11-22 22:23:18,911 | INFO     | ***************************************
[2025-11-22 23:23:56] 2025-11-22 22:23:18,911 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-22 23:23:56] 2025-11-22 22:23:18,911 | INFO     | ***************************************
[2025-11-22 23:23:56] 2025-11-22 22:23:18,911 | INFO     | 
[2025-11-22 23:23:56] 2025-11-22 22:23:18,912 | INFO     | pilot is running in a VM
[2025-11-22 23:23:56] 2025-11-22 22:23:18,912 | INFO     | architecture information:
[2025-11-22 23:23:56] 2025-11-22 22:23:18,913 | INFO     | executing command: cat /etc/os-release
[2025-11-22 23:23:56] 2025-11-22 22:23:19,004 | INFO     | cat /etc/os-release:
[2025-11-22 23:23:56] NAME="CentOS Linux"
[2025-11-22 23:23:56] VERSION="7 (Core)"
[2025-11-22 23:23:56] ID="centos"
[2025-11-22 23:23:56] ID_LIKE="rhel fedora"
[2025-11-22 23:23:56] VERSION_ID="7"
[2025-11-22 23:23:56] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-22 23:23:56] ANSI_COLOR="0;31"
[2025-11-22 23:23:56] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-22 23:23:56] HOME_URL="https://www.centos.org/"
[2025-11-22 23:23:56] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-22 23:23:56] 
[2025-11-22 23:23:56] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-22 23:23:56] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-22 23:23:56] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-22 23:23:56] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-22 23:23:56] 
[2025-11-22 23:23:56] 2025-11-22 22:23:19,005 | INFO     | ***************************************
[2025-11-22 23:23:56] 2025-11-22 22:23:19,509 | INFO     | executing command: df -mP /var/lib/boinc/slots/3
[2025-11-22 23:23:56] 2025-11-22 22:23:19,749 | INFO     | sufficient remaining disk space (494961426432 B)
[2025-11-22 23:23:56] 2025-11-22 22:23:19,750 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-22 23:23:56] 2025-11-22 22:23:19,750 | INFO     | current server update state: UPDATING_FINAL
[2025-11-22 23:23:56] 2025-11-22 22:23:19,750 | INFO     | update_server=False
[2025-11-22 23:23:56] 2025-11-22 22:23:19,750 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-22 23:23:56] 2025-11-22 22:23:19,751 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-22 23:23:56] 2025-11-22 22:23:19,752 | INFO     | aborting loop
[2025-11-22 23:23:56] 2025-11-22 22:23:19,819 | INFO     | all payload control threads have been joined
[2025-11-22 23:23:56] 2025-11-22 22:23:19,849 | INFO     | all job control threads have been joined
[2025-11-22 23:23:56] 2025-11-22 22:23:20,341 | INFO     | all data control threads have been joined
[2025-11-22 23:23:56] 2025-11-22 22:23:20,391 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-22 23:23:56] 2025-11-22 22:23:20,757 | INFO     | [job] job monitor thread has finished
[2025-11-22 23:23:56] 2025-11-22 22:23:20,757 | INFO     | [job] retrieve thread has finished
[2025-11-22 23:23:56] 2025-11-22 22:23:20,825 | INFO     | [payload] control thread has finished
[2025-11-22 23:23:56] 2025-11-22 22:23:20,826 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-22 23:23:56] 2025-11-22 22:23:20,855 | INFO     | [job] control thread has finished
[2025-11-22 23:23:56] 2025-11-22 22:23:20,888 | INFO     | [payload] validate_pre thread has finished
[2025-11-22 23:23:56] 2025-11-22 22:23:20,954 | INFO     | [job] validate thread has finished
[2025-11-22 23:23:56] 2025-11-22 22:23:21,347 | INFO     | [data] control thread has finished
[2025-11-22 23:23:56] 2025-11-22 22:23:21,644 | INFO     | [payload] validate_post thread has finished
[2025-11-22 23:23:56] 2025-11-22 22:23:21,734 | INFO     | [payload] execute_payloads thread has finished
[2025-11-22 23:23:56] 2025-11-22 22:23:21,886 | INFO     | [payload] failed_post thread has finished
[2025-11-22 23:23:56] 2025-11-22 22:23:21,889 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-22 23:23:56] 2025-11-22 22:23:22,074 | INFO     | [data] copytool_in thread has finished
[2025-11-22 23:23:56] 2025-11-22 22:23:22,076 | INFO     | [job] create_data_payload thread has finished
[2025-11-22 23:23:56] 2025-11-22 22:23:22,234 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-22 23:23:56] 2025-11-22 22:23:22,833 | INFO     | [data] copytool_out thread has finished
[2025-11-22 23:23:56] 2025-11-22 22:23:22,895 | INFO     | [job] queue monitor thread has finished
[2025-11-22 23:23:56] 2025-11-22 22:23:24,400 | INFO     | [data] queue_monitor thread has finished
[2025-11-22 23:23:56] 2025-11-22 22:23:45,606 | INFO     | [monitor] cgroup control has ended
[2025-11-22 23:23:56] 2025-11-22 22:23:46,853 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140551746770752)>', '<ExcThread(monitor, started 140551286400768)>']
[2025-11-22 23:23:56] 2025-11-22 22:23:49,710 | INFO     | PID=27798 has CPU usage=1.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-22 23:23:56] 2025-11-22 22:23:49,710 | INFO     | .. there are 9 such processes running
[2025-11-22 23:23:56] 2025-11-22 22:23:49,711 | INFO     | found 0 job(s) in 20 queues
[2025-11-22 23:23:56] 2025-11-22 22:23:49,711 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-22 23:23:56] 2025-11-22 22:23:49,711 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-22 23:23:56] 2025-11-22 22:23:49,711 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-22 23:23:56] 2025-11-22 22:23:49,712 | INFO     | [monitor] control thread has ended
[2025-11-22 23:23:56] 2025-11-22 22:23:51,879 | INFO     | all workflow threads have been joined
[2025-11-22 23:23:56] 2025-11-22 22:23:51,880 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-22 23:23:56] 2025-11-22 22:23:51,880 | INFO     | traces error code: 0
[2025-11-22 23:23:56] 2025-11-22 22:23:51,880 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-22 23:23:56] 2025-11-22 22:23:52,242 [wrapper] ==== pilot stdout END ====
[2025-11-22 23:23:56] 2025-11-22 22:23:52,305 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-22 23:23:56] 2025-11-22 22:23:52,380 [wrapper] pilotpid: 27798
[2025-11-22 23:23:56] 2025-11-22 22:23:52,441 [wrapper] Pilot exit status: 0
[2025-11-22 23:23:56] 2025-11-22 22:23:52,765 [wrapper] pandaids: 6891577903
[2025-11-22 23:23:56] 2025-11-22 22:23:53,248 [wrapper] cleanup supervisor_pilot 24685 27799
[2025-11-22 23:23:56] 2025-11-22 22:23:53,299 [wrapper] Test setup, not cleaning
[2025-11-22 23:23:56] 2025-11-22 22:23:53,376 [wrapper] apfmon messages muted
[2025-11-22 23:23:56] 2025-11-22 22:23:53,392 [wrapper] ==== wrapper stdout END ====
[2025-11-22 23:23:56] 2025-11-22 22:23:53,456 [wrapper] ==== wrapper stderr END ====
[2025-11-22 23:23:56]  *** Error codes and diagnostics ***
[2025-11-22 23:23:56]     "exeErrorCode": 0,
[2025-11-22 23:23:56]     "exeErrorDiag": "",
[2025-11-22 23:23:56]     "pilotErrorCode": 0,
[2025-11-22 23:23:56]     "pilotErrorDiag": "",
[2025-11-22 23:23:56]  *** Listing of results directory ***
[2025-11-22 23:23:56] total 1335236
[2025-11-22 23:23:56] -rw-r--r--. 1 boinc boinc    576529 Nov 18 17:45 pilot3.tar.gz
[2025-11-22 23:23:56] -rw-r--r--. 1 boinc boinc      5112 Nov 18 17:46 queuedata.json
[2025-11-22 23:23:56] -rwx------. 1 boinc boinc     36292 Nov 18 17:46 runpilot2-wrapper.sh
[2025-11-22 23:23:56] -rw-r--r--. 1 boinc boinc       100 Nov 21 22:00 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-22 23:23:56] -rwxr-xr-x. 1 boinc boinc      7986 Nov 21 22:00 run_atlas
[2025-11-22 23:23:56] -rw-r--r--. 1 boinc boinc       105 Nov 21 22:00 job.xml
[2025-11-22 23:23:56] -rw-r--r--. 2 boinc boinc 410706173 Nov 21 22:00 EVNT.47493065._000386.pool.root.1
[2025-11-22 23:23:56] drwxrwx--x. 2 boinc boinc        68 Nov 21 22:00 shared
[2025-11-22 23:23:56] -rw-r--r--. 2 boinc boinc    590099 Nov 21 22:00 input.tar.gz
[2025-11-22 23:23:56] -rw-r--r--. 1 boinc boinc      6390 Nov 21 22:00 init_data.xml
[2025-11-22 23:23:56] -rw-r--r--. 2 boinc boinc     15120 Nov 21 22:00 start_atlas.sh
[2025-11-22 23:23:56] -rw-r--r--. 1 boinc boinc         0 Nov 21 22:00 boinc_lockfile
[2025-11-22 23:23:56] -rw-r--r--. 1 boinc boinc      2773 Nov 21 22:00 pandaJob.out
[2025-11-22 23:23:56] -rw-------. 1 boinc boinc    989798 Nov 21 22:03 agis_schedconf.cvmfs.json
[2025-11-22 23:23:56] drwx------. 5 boinc boinc      4096 Nov 21 22:03 pilot3
[2025-11-22 23:23:56] -rw-r--r--. 1 boinc boinc       533 Nov 22 23:00 boinc_task_state.xml
[2025-11-22 23:23:56] -rw-------. 1 boinc boinc 923349554 Nov 22 23:20 HITS.47493068._003857.pool.root.1
[2025-11-22 23:23:56] -rw-------. 1 boinc boinc      1031 Nov 22 23:21 memory_monitor_summary.json
[2025-11-22 23:23:56] -rw-------. 1 boinc boinc   1526164 Nov 22 23:21 agis_ddmendpoints.agis.ALL.json
[2025-11-22 23:23:56] -rw-------. 1 boinc boinc   2549043 Nov 22 23:21 log.47493068._003857.job.log.tgz.1
[2025-11-22 23:23:56] -rw-------. 1 boinc boinc      8637 Nov 22 23:23 heartbeat.json
[2025-11-22 23:23:56] -rw-r--r--. 1 boinc boinc      8192 Nov 22 23:23 boinc_mmap_file
[2025-11-22 23:23:56] -rw-r--r--. 1 boinc boinc        29 Nov 22 23:23 wrapper_checkpoint.txt
[2025-11-22 23:23:56] -rw-------. 1 boinc boinc        95 Nov 22 23:23 pilot_heartbeat.json
[2025-11-22 23:23:56] -rw-------. 1 boinc boinc      4884 Nov 22 23:23 pilotlog.txt
[2025-11-22 23:23:56] -rw-------. 1 boinc boinc  12104351 Nov 22 23:23 log.47493068._003857.job.log.1
[2025-11-22 23:23:56] -rw-------. 1 boinc boinc       353 Nov 22 23:23 output.list
[2025-11-22 23:23:56] -rw-r--r--. 1 boinc boinc       620 Nov 22 23:23 runtime_log
[2025-11-22 23:23:56] -rw-------. 1 boinc boinc  14673920 Nov 22 23:23 result.tar.gz
[2025-11-22 23:23:56] -rw-r--r--. 1 boinc boinc      8703 Nov 22 23:23 runtime_log.err
[2025-11-22 23:23:56] -rw-------. 1 boinc boinc       662 Nov 22 23:23 od6MDmf1df8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm5sFKDmojmp9m.diag
[2025-11-22 23:23:56] -rw-r--r--. 1 boinc boinc     20914 Nov 22 23:23 stderr.txt
[2025-11-22 23:23:56] HITS file was successfully produced:
[2025-11-22 23:23:56] -rw-------. 1 boinc boinc 923349554 Nov 22 23:20 shared/HITS.pool.root.1
[2025-11-22 23:23:56]  *** Contents of shared directory: ***
[2025-11-22 23:23:56] total 1317724
[2025-11-22 23:23:56] -rw-r--r--. 2 boinc boinc 410706173 Nov 21 22:00 ATLAS.root_0
[2025-11-22 23:23:56] -rw-r--r--. 2 boinc boinc    590099 Nov 21 22:00 input.tar.gz
[2025-11-22 23:23:56] -rw-r--r--. 2 boinc boinc     15120 Nov 21 22:00 start_atlas.sh
[2025-11-22 23:23:56] -rw-------. 1 boinc boinc 923349554 Nov 22 23:20 HITS.pool.root.1
[2025-11-22 23:23:56] -rw-------. 1 boinc boinc  14673920 Nov 22 23:23 result.tar.gz
23:23:57 (23946): run_atlas exited; CPU time 339209.646519
23:23:57 (23946): called boinc_finish(0)

</stderr_txt>
]]>

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