Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
21:23:22 (25018): wrapper (7.7.26015): starting
21:23:22 (25018): wrapper: running run_atlas (--nthreads 8)
[2025-11-19 21:23:22] Arguments: --nthreads 8
[2025-11-19 21:23:22] Threads: 8
[2025-11-19 21:23:22] Checking for CVMFS
[2025-11-19 21:23:22] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-19 21:23:23] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-19 21:23:23] Running cvmfs_config stat atlas.cern.ch
[2025-11-19 21:23:23] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-19 21:23:23] 2.11.2.0 9405 201752 142288 153056 1 180 17620397 25165824 3290 130560 2 87122555 99.885 40448770 2555 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-11-19 21:23:23] CVMFS is ok
[2025-11-19 21:23:23] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-19 21:23:23] Checking for apptainer binary...
[2025-11-19 21:23:23] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-19 21:23:23] Running /usr/bin/apptainer --version
[2025-11-19 21:23:23] apptainer version 1.3.2-1.el7
[2025-11-19 21:23:23] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-19 21:23:25] cg-vwn431.simple-grid.lan
[2025-11-19 21:23:25] apptainer works
[2025-11-19 21:23:25] Set ATHENA_PROC_NUMBER=8
[2025-11-19 21:23:25] Set ATHENA_CORE_NUMBER=8
[2025-11-19 21:23:25] Starting ATLAS job with PandaID=6891565230
[2025-11-19 21:23:25] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/15 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-20 22:48:40]  *** The last 200 lines of the pilot log: ***
[2025-11-20 22:48:40] 2025-11-20 21:47:36,309 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-20 22:48:40] 2025-11-20 21:47:37,251 | INFO     | time since job start (91423s) is within the limit (172800.0s)
[2025-11-20 22:48:40] 2025-11-20 21:47:38,824 | INFO     | monitor loop #6085: job 0:6891565230 is in state 'finished'
[2025-11-20 22:48:40] 2025-11-20 21:47:38,824 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-20 22:48:40] 2025-11-20 21:47:39,267 | INFO     | time since job start (91425s) is within the limit (172800.0s)
[2025-11-20 22:48:40] 2025-11-20 21:47:41,273 | INFO     | time since job start (91427s) is within the limit (172800.0s)
[2025-11-20 22:48:40] 2025-11-20 21:47:41,331 | INFO     | monitor loop #6086: job 0:6891565230 is in state 'finished'
[2025-11-20 22:48:40] 2025-11-20 21:47:41,331 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-20 22:48:40] 2025-11-20 21:47:43,280 | INFO     | time since job start (91429s) is within the limit (172800.0s)
[2025-11-20 22:48:40] 2025-11-20 21:47:43,842 | INFO     | monitor loop #6087: job 0:6891565230 is in state 'finished'
[2025-11-20 22:48:40] 2025-11-20 21:47:43,842 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-20 22:48:40] 2025-11-20 21:47:45,288 | INFO     | time since job start (91431s) is within the limit (172800.0s)
[2025-11-20 22:48:40] 2025-11-20 21:47:46,347 | INFO     | monitor loop #6088: job 0:6891565230 is in state 'finished'
[2025-11-20 22:48:40] 2025-11-20 21:47:46,347 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-20 22:48:40] 2025-11-20 21:47:47,295 | INFO     | time since job start (91433s) is within the limit (172800.0s)
[2025-11-20 22:48:40] 2025-11-20 21:47:47,688 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-20 22:48:40] 2025-11-20 21:47:47,689 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2025-11-20 22:48:40] 2025-11-20 21:47:47,691 | INFO     | using path: /var/lib/boinc/slots/15/PanDA_Pilot-6891565230/memory_monitor_summary.json (trf name=prmon)
[2025-11-20 22:48:40] 2025-11-20 21:47:47,692 | INFO     | extracted standard info from prmon json
[2025-11-20 22:48:40] 2025-11-20 21:47:47,692 | INFO     | extracted standard memory fields from prmon json
[2025-11-20 22:48:40] 2025-11-20 21:47:47,692 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-20 22:48:40] 2025-11-20 21:47:47,721 | INFO     | fitting pss+swap vs Time
[2025-11-20 22:48:40] 2025-11-20 21:47:47,724 | INFO     | sum of square deviations: 1038179132545.99
[2025-11-20 22:48:40] 2025-11-20 21:47:47,804 | INFO     | sum of deviations: 2600200709907.019
[2025-11-20 22:48:40] 2025-11-20 21:47:47,804 | INFO     | mean x: 1763629555.6791444
[2025-11-20 22:48:40] 2025-11-20 21:47:47,804 | INFO     | mean y: 2866019.4104278074
[2025-11-20 22:48:40] 2025-11-20 21:47:47,805 | INFO     | intersect: -4414281926.381833
[2025-11-20 22:48:40] 2025-11-20 21:47:47,807 | INFO     | chi2: 16.93529697813852
[2025-11-20 22:48:40] 2025-11-20 21:47:47,809 | INFO     | sum of square deviations: 1027804852779.0138
[2025-11-20 22:48:40] 2025-11-20 21:47:47,867 | INFO     | sum of deviations: 3102980740453.948
[2025-11-20 22:48:40] 2025-11-20 21:47:47,867 | INFO     | mean x: 1763629403.1830986
[2025-11-20 22:48:40] 2025-11-20 21:47:47,867 | INFO     | mean y: 2873409.4104627767
[2025-11-20 22:48:40] 2025-11-20 21:47:47,867 | INFO     | intersect: -5321588774.805434
[2025-11-20 22:48:40] 2025-11-20 21:47:47,869 | INFO     | chi2: 13.64106917180706
[2025-11-20 22:48:40] 2025-11-20 21:47:47,869 | INFO     | current chi2=13.64106917180706 (change=19.451845518764284 %)
[2025-11-20 22:48:40] 2025-11-20 21:47:47,870 | INFO     | right removable region: 1490
[2025-11-20 22:48:40] 2025-11-20 21:47:47,872 | INFO     | sum of square deviations: 1027803776739.0148
[2025-11-20 22:48:40] 2025-11-20 21:47:47,942 | INFO     | sum of deviations: 2093188743872.662
[2025-11-20 22:48:40] 2025-11-20 21:47:47,942 | INFO     | mean x: 1763629708.1830986
[2025-11-20 22:48:40] 2025-11-20 21:47:47,942 | INFO     | mean y: 2873468.8913480886
[2025-11-20 22:48:40] 2025-11-20 21:47:47,943 | INFO     | intersect: -3588872287.522313
[2025-11-20 22:48:40] 2025-11-20 21:47:47,945 | INFO     | chi2: 13.93949019377742
[2025-11-20 22:48:40] 2025-11-20 21:47:47,945 | INFO     | current chi2=13.93949019377742 (change=17.689720990593404 %)
[2025-11-20 22:48:40] 2025-11-20 21:47:47,945 | INFO     | left removable region: 10
[2025-11-20 22:48:40] 2025-11-20 21:47:47,962 | INFO     | sum of square deviations: 1005223432349.0281
[2025-11-20 22:48:40] 2025-11-20 21:47:48,036 | INFO     | sum of deviations: 2566961490531.866
[2025-11-20 22:48:40] 2025-11-20 21:47:48,037 | INFO     | mean x: 1763629677.6891892
[2025-11-20 22:48:40] 2025-11-20 21:47:48,037 | INFO     | mean y: 2884809.254054054
[2025-11-20 22:48:40] 2025-11-20 21:47:48,037 | INFO     | intersect: -4500760172.049344
[2025-11-20 22:48:40] 2025-11-20 21:47:48,039 | INFO     | chi2: 9.536227944017458
[2025-11-20 22:48:40] 2025-11-20 21:47:48,039 | INFO     | current memory leak: 2.55 B/s (using 1480 data points, chi2=9.54)
[2025-11-20 22:48:40] 2025-11-20 21:47:48,042 | INFO     | could have reported an average CPU frequency of 1999 MHz (50 samples)
[2025-11-20 22:48:40] 2025-11-20 21:47:48,042 | INFO     | ..............................
[2025-11-20 22:48:40] 2025-11-20 21:47:48,042 | INFO     | . Timing measurements:
[2025-11-20 22:48:40] 2025-11-20 21:47:48,042 | INFO     | . get job = 0 s
[2025-11-20 22:48:40] 2025-11-20 21:47:48,043 | INFO     | . initial setup = 2 s
[2025-11-20 22:48:40] 2025-11-20 21:47:48,043 | INFO     | . payload setup = 30 s
[2025-11-20 22:48:40] 2025-11-20 21:47:48,043 | INFO     | . stage-in = 0 s
[2025-11-20 22:48:40] 2025-11-20 21:47:48,043 | INFO     | . payload execution = 91264 s
[2025-11-20 22:48:40] 2025-11-20 21:47:48,043 | INFO     | . stage-out = 6 s
[2025-11-20 22:48:40] 2025-11-20 21:47:48,043 | INFO     | . log creation = 2 s
[2025-11-20 22:48:40] 2025-11-20 21:47:48,043 | INFO     | ..............................
[2025-11-20 22:48:40] 2025-11-20 21:47:48,360 | INFO     | 
[2025-11-20 22:48:40] 2025-11-20 21:47:48,360 | INFO     | job summary report
[2025-11-20 22:48:40] 2025-11-20 21:47:48,360 | INFO     | --------------------------------------------------
[2025-11-20 22:48:40] 2025-11-20 21:47:48,360 | INFO     | PanDA job id: 6891565230
[2025-11-20 22:48:40] 2025-11-20 21:47:48,360 | INFO     | task id: 47493068
[2025-11-20 22:48:40] 2025-11-20 21:47:48,360 | INFO     | errors: (none)
[2025-11-20 22:48:40] 2025-11-20 21:47:48,361 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-20 22:48:40] 2025-11-20 21:47:48,361 | INFO     | pilot state: finished 
[2025-11-20 22:48:40] 2025-11-20 21:47:48,361 | INFO     | transexitcode: 0
[2025-11-20 22:48:40] 2025-11-20 21:47:48,361 | INFO     | exeerrorcode: 0
[2025-11-20 22:48:40] 2025-11-20 21:47:48,361 | INFO     | exeerrordiag: 
[2025-11-20 22:48:40] 2025-11-20 21:47:48,361 | INFO     | exitcode: 0
[2025-11-20 22:48:40] 2025-11-20 21:47:48,361 | INFO     | exitmsg: OK
[2025-11-20 22:48:40] 2025-11-20 21:47:48,361 | INFO     | cpuconsumptiontime: 338590 s
[2025-11-20 22:48:40] 2025-11-20 21:47:48,361 | INFO     | nevents: 1000
[2025-11-20 22:48:40] 2025-11-20 21:47:48,361 | INFO     | neventsw: 0
[2025-11-20 22:48:40] 2025-11-20 21:47:48,361 | INFO     | pid: 11555
[2025-11-20 22:48:40] 2025-11-20 21:47:48,361 | INFO     | pgrp: 11555
[2025-11-20 22:48:40] 2025-11-20 21:47:48,362 | INFO     | corecount: 8
[2025-11-20 22:48:40] 2025-11-20 21:47:48,362 | INFO     | event service: False
[2025-11-20 22:48:40] 2025-11-20 21:47:48,362 | INFO     | sizes: {0: 2296372, 1: 2297229, 2: 2297229, 12: 2297257, 14: 2297547, 23: 2297575, 91296: 2361685, 91302: 2372277, 91304: 2372333, 91381: 2372579}
[2025-11-20 22:48:40] 2025-11-20 21:47:48,362 | INFO     | --------------------------------------------------
[2025-11-20 22:48:40] 2025-11-20 21:47:48,362 | INFO     | 
[2025-11-20 22:48:40] 2025-11-20 21:47:48,362 | INFO     | executing command: ls -lF /var/lib/boinc/slots/15
[2025-11-20 22:48:40] 2025-11-20 21:47:48,548 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-20 22:48:40] 2025-11-20 21:47:48,548 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-20 22:48:40] 2025-11-20 21:47:48,548 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-20 22:48:40] 2025-11-20 21:47:48,548 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-20 22:48:40] 2025-11-20 21:47:48,549 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-20 22:48:40] 2025-11-20 21:47:48,549 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-20 22:48:40] 2025-11-20 21:47:48,549 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-20 22:48:40] 2025-11-20 21:47:48,549 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-20 22:48:40] 2025-11-20 21:47:48,549 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-20 22:48:40] 2025-11-20 21:47:48,549 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-20 22:48:40] 2025-11-20 21:47:48,549 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-20 22:48:40] 2025-11-20 21:47:48,549 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-20 22:48:40] 2025-11-20 21:47:48,549 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-20 22:48:40] 2025-11-20 21:47:48,550 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-20 22:48:40] 2025-11-20 21:47:48,550 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-20 22:48:40] 2025-11-20 21:47:48,550 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-20 22:48:40] 2025-11-20 21:47:48,550 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-20 22:48:40] 2025-11-20 21:47:48,550 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-20 22:48:40] 2025-11-20 21:47:48,550 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-20 22:48:40] 2025-11-20 21:47:48,550 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-20 22:48:40] 2025-11-20 21:47:48,550 | INFO     | job 6891565230 has completed (purged errors)
[2025-11-20 22:48:40] 2025-11-20 21:47:48,551 | INFO     | overall cleanup function is called
[2025-11-20 22:48:40] 2025-11-20 21:47:49,569 | INFO     | --- collectZombieJob: --- 10, [11555]
[2025-11-20 22:48:40] 2025-11-20 21:47:49,569 | INFO     | zombie collector waiting for pid 11555
[2025-11-20 22:48:40] 2025-11-20 21:47:49,569 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-20 22:48:40] 2025-11-20 21:47:49,569 | INFO     | collected zombie processes
[2025-11-20 22:48:40] 2025-11-20 21:47:49,569 | INFO     | will attempt to kill all subprocesses of pid=11555
[2025-11-20 22:48:40] 2025-11-20 21:47:49,675 | INFO     | process IDs to be killed: [11555] (in reverse order)
[2025-11-20 22:48:40] 2025-11-20 21:47:49,809 | WARNING  | found no corresponding commands to process id(s)
[2025-11-20 22:48:40] 2025-11-20 21:47:49,810 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-20 22:48:40] 2025-11-20 21:47:49,813 | INFO     | did not find any defunct processes belonging to 11555
[2025-11-20 22:48:40] 2025-11-20 21:47:49,816 | INFO     | did not find any defunct processes belonging to 11555
[2025-11-20 22:48:40] 2025-11-20 21:47:49,819 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-20 22:48:40] 2025-11-20 21:47:49,820 | INFO     | ready for new job
[2025-11-20 22:48:40] 2025-11-20 21:47:49,820 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-20 22:48:40] 2025-11-20 21:47:49,826 | INFO     | ***************************************
[2025-11-20 22:48:40] 2025-11-20 21:47:49,826 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-20 22:48:40] 2025-11-20 21:47:49,826 | INFO     | ***************************************
[2025-11-20 22:48:40] 2025-11-20 21:47:49,826 | INFO     | 
[2025-11-20 22:48:40] 2025-11-20 21:47:49,827 | INFO     | pilot is running in a VM
[2025-11-20 22:48:40] 2025-11-20 21:47:49,827 | INFO     | architecture information:
[2025-11-20 22:48:40] 2025-11-20 21:47:49,828 | INFO     | executing command: cat /etc/os-release
[2025-11-20 22:48:40] 2025-11-20 21:47:49,935 | INFO     | cat /etc/os-release:
[2025-11-20 22:48:40] NAME="CentOS Linux"
[2025-11-20 22:48:40] VERSION="7 (Core)"
[2025-11-20 22:48:40] ID="centos"
[2025-11-20 22:48:40] ID_LIKE="rhel fedora"
[2025-11-20 22:48:40] VERSION_ID="7"
[2025-11-20 22:48:40] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-20 22:48:40] ANSI_COLOR="0;31"
[2025-11-20 22:48:40] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-20 22:48:40] HOME_URL="https://www.centos.org/"
[2025-11-20 22:48:40] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-20 22:48:40] 
[2025-11-20 22:48:40] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-20 22:48:40] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-20 22:48:40] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-20 22:48:40] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-20 22:48:40] 
[2025-11-20 22:48:40] 2025-11-20 21:47:49,935 | INFO     | ***************************************
[2025-11-20 22:48:40] 2025-11-20 21:47:50,439 | INFO     | executing command: df -mP /var/lib/boinc/slots/15
[2025-11-20 22:48:40] 2025-11-20 21:47:50,464 | INFO     | sufficient remaining disk space (494392049664 B)
[2025-11-20 22:48:40] 2025-11-20 21:47:50,465 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-20 22:48:40] 2025-11-20 21:47:50,465 | INFO     | current server update state: UPDATING_FINAL
[2025-11-20 22:48:40] 2025-11-20 21:47:50,465 | INFO     | update_server=False
[2025-11-20 22:48:40] 2025-11-20 21:47:50,465 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-20 22:48:40] 2025-11-20 21:47:50,466 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-20 22:48:40] 2025-11-20 21:47:50,466 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-20 22:48:40] 2025-11-20 21:47:50,467 | INFO     | aborting loop
[2025-11-20 22:48:40] 2025-11-20 21:47:50,467 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-20 22:48:40] 2025-11-20 21:47:50,617 | INFO     | all data control threads have been joined
[2025-11-20 22:48:40] 2025-11-20 21:47:51,470 | INFO     | [job] retrieve thread has finished
[2025-11-20 22:48:40] 2025-11-20 21:47:51,473 | INFO     | [job] job monitor thread has finished
[2025-11-20 22:48:40] 2025-11-20 21:47:51,595 | INFO     | all payload control threads have been joined
[2025-11-20 22:48:40] 2025-11-20 21:47:51,623 | INFO     | [data] control thread has finished
[2025-11-20 22:48:40] 2025-11-20 21:47:51,923 | INFO     | [data] copytool_in thread has finished
[2025-11-20 22:48:40] 2025-11-20 21:47:51,932 | INFO     | all job control threads have been joined
[2025-11-20 22:48:40] 2025-11-20 21:47:52,143 | INFO     | [payload] validate_pre thread has finished
[2025-11-20 22:48:40] 2025-11-20 21:47:52,204 | INFO     | [job] create_data_payload thread has finished
[2025-11-20 22:48:40] 2025-11-20 21:47:52,473 | INFO     | [data] copytool_out thread has finished
[2025-11-20 22:48:40] 2025-11-20 21:47:52,490 | INFO     | [payload] validate_post thread has finished
[2025-11-20 22:48:40] 2025-11-20 21:47:52,600 | INFO     | [payload] control thread has finished
[2025-11-20 22:48:40] 2025-11-20 21:47:52,687 | INFO     | [payload] execute_payloads thread has finished
[2025-11-20 22:48:40] 2025-11-20 21:47:52,800 | INFO     | [job] validate thread has finished
[2025-11-20 22:48:40] 2025-11-20 21:47:52,842 | INFO     | [payload] failed_post thread has finished
[2025-11-20 22:48:40] 2025-11-20 21:47:52,938 | INFO     | [job] control thread has finished
[2025-11-20 22:48:40] 2025-11-20 21:47:53,191 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-20 22:48:40] 2025-11-20 21:47:54,197 | INFO     | [job] queue monitor thread has finished
[2025-11-20 22:48:40] 2025-11-20 21:47:54,476 | INFO     | [data] queue_monitor thread has finished
[2025-11-20 22:48:40] 2025-11-20 21:48:01,240 | INFO     | job.realtimelogging is not enabled
[2025-11-20 22:48:40] 2025-11-20 21:48:02,246 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-20 22:48:40] 2025-11-20 21:48:20,535 | INFO     | PID=28784 has CPU usage=1.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-20 22:48:40] 2025-11-20 21:48:20,535 | INFO     | .. there are 9 such processes running
[2025-11-20 22:48:40] 2025-11-20 21:48:20,537 | INFO     | found 0 job(s) in 20 queues
[2025-11-20 22:48:40] 2025-11-20 21:48:20,537 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-20 22:48:40] 2025-11-20 21:48:20,537 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-20 22:48:40] 2025-11-20 21:48:33,680 | INFO     | [monitor] cgroup control has ended
[2025-11-20 22:48:40] 2025-11-20 21:48:34,747 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140445120038720)>', '<ExcThread(monitor, started 140444658808576)>']
[2025-11-20 22:48:40] 2025-11-20 21:48:35,616 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-20 22:48:40] 2025-11-20 21:48:35,616 | INFO     | [monitor] control thread has ended
[2025-11-20 22:48:40] 2025-11-20 21:48:39,772 | INFO     | all workflow threads have been joined
[2025-11-20 22:48:40] 2025-11-20 21:48:39,773 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-20 22:48:40] 2025-11-20 21:48:39,773 | INFO     | traces error code: 0
[2025-11-20 22:48:40] 2025-11-20 21:48:39,773 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-20 22:48:40] 2025-11-20 21:48:40,038 [wrapper] ==== pilot stdout END ====
[2025-11-20 22:48:40] 2025-11-20 21:48:40,046 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-20 22:48:40] 2025-11-20 21:48:40,053 [wrapper] pilotpid: 28784
[2025-11-20 22:48:40] 2025-11-20 21:48:40,058 [wrapper] Pilot exit status: 0
[2025-11-20 22:48:40] 2025-11-20 21:48:40,099 [wrapper] pandaids: 6891565230
[2025-11-20 22:48:40] 2025-11-20 21:48:40,226 [wrapper] cleanup supervisor_pilot 13791 28785
[2025-11-20 22:48:40] 2025-11-20 21:48:40,252 [wrapper] Test setup, not cleaning
[2025-11-20 22:48:40] 2025-11-20 21:48:40,263 [wrapper] apfmon messages muted
[2025-11-20 22:48:40] 2025-11-20 21:48:40,277 [wrapper] ==== wrapper stdout END ====
[2025-11-20 22:48:40] 2025-11-20 21:48:40,282 [wrapper] ==== wrapper stderr END ====
[2025-11-20 22:48:40]  *** Error codes and diagnostics ***
[2025-11-20 22:48:40]     "exeErrorCode": 0,
[2025-11-20 22:48:40]     "exeErrorDiag": "",
[2025-11-20 22:48:40]     "pilotErrorCode": 0,
[2025-11-20 22:48:40]     "pilotErrorDiag": "",
[2025-11-20 22:48:40]  *** Listing of results directory ***
[2025-11-20 22:48:40] total 1340920
[2025-11-20 22:48:40] -rw-r--r--. 1 boinc boinc    576529 Nov 18 16:15 pilot3.tar.gz
[2025-11-20 22:48:40] -rw-r--r--. 1 boinc boinc      5112 Nov 18 16:29 queuedata.json
[2025-11-20 22:48:40] -rwx------. 1 boinc boinc     36292 Nov 18 16:30 runpilot2-wrapper.sh
[2025-11-20 22:48:40] -rw-r--r--. 1 boinc boinc       100 Nov 19 21:23 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-20 22:48:40] -rwxr-xr-x. 1 boinc boinc      7986 Nov 19 21:23 run_atlas
[2025-11-20 22:48:40] -rw-r--r--. 1 boinc boinc       105 Nov 19 21:23 job.xml
[2025-11-20 22:48:40] -rw-r--r--. 1 boinc boinc      6393 Nov 19 21:23 init_data.xml
[2025-11-20 22:48:40] -rw-r--r--. 2 boinc boinc 409831024 Nov 19 21:23 EVNT.47493065._000138.pool.root.1
[2025-11-20 22:48:40] -rw-r--r--. 2 boinc boinc     15120 Nov 19 21:23 start_atlas.sh
[2025-11-20 22:48:40] drwxrwx--x. 2 boinc boinc        68 Nov 19 21:23 shared
[2025-11-20 22:48:40] -rw-r--r--. 2 boinc boinc    590100 Nov 19 21:23 input.tar.gz
[2025-11-20 22:48:40] -rw-r--r--. 1 boinc boinc         0 Nov 19 21:23 boinc_lockfile
[2025-11-20 22:48:40] -rw-r--r--. 1 boinc boinc      2773 Nov 19 21:23 pandaJob.out
[2025-11-20 22:48:40] -rw-------. 1 boinc boinc    989443 Nov 19 21:23 agis_schedconf.cvmfs.json
[2025-11-20 22:48:40] drwx------. 5 boinc boinc      4096 Nov 19 21:23 pilot3
[2025-11-20 22:48:40] -rw-r--r--. 1 boinc boinc       533 Nov 20 22:22 boinc_task_state.xml
[2025-11-20 22:48:40] -rw-------. 1 boinc boinc 929960479 Nov 20 22:45 HITS.47493068._001376.pool.root.1
[2025-11-20 22:48:40] -rw-------. 1 boinc boinc      1032 Nov 20 22:46 memory_monitor_summary.json
[2025-11-20 22:48:40] -rw-------. 1 boinc boinc   1526164 Nov 20 22:46 agis_ddmendpoints.agis.ALL.json
[2025-11-20 22:48:40] -rw-------. 1 boinc boinc   2543940 Nov 20 22:46 log.47493068._001376.job.log.tgz.1
[2025-11-20 22:48:40] -rw-------. 1 boinc boinc      8636 Nov 20 22:47 heartbeat.json
[2025-11-20 22:48:40] -rw-------. 1 boinc boinc        95 Nov 20 22:48 pilot_heartbeat.json
[2025-11-20 22:48:40] -rw-r--r--. 1 boinc boinc      8192 Nov 20 22:48 boinc_mmap_file
[2025-11-20 22:48:40] -rw-r--r--. 1 boinc boinc        29 Nov 20 22:48 wrapper_checkpoint.txt
[2025-11-20 22:48:40] -rw-------. 1 boinc boinc      4957 Nov 20 22:48 pilotlog.txt
[2025-11-20 22:48:40] -rw-------. 1 boinc boinc  12154812 Nov 20 22:48 log.47493068._001376.job.log.1
[2025-11-20 22:48:40] -rw-------. 1 boinc boinc       353 Nov 20 22:48 output.list
[2025-11-20 22:48:40] -rw-r--r--. 1 boinc boinc       620 Nov 20 22:48 runtime_log
[2025-11-20 22:48:40] -rw-------. 1 boinc boinc  14714880 Nov 20 22:48 result.tar.gz
[2025-11-20 22:48:40] -rw-r--r--. 1 boinc boinc      8717 Nov 20 22:48 runtime_log.err
[2025-11-20 22:48:40] -rw-------. 1 boinc boinc       662 Nov 20 22:48 gQyNDmcqcf8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmLIFKDmj6DOTo.diag
[2025-11-20 22:48:40] -rw-r--r--. 1 boinc boinc     21399 Nov 20 22:48 stderr.txt
[2025-11-20 22:48:40] HITS file was successfully produced:
[2025-11-20 22:48:40] -rw-------. 1 boinc boinc 929960479 Nov 20 22:45 shared/HITS.pool.root.1
[2025-11-20 22:48:40]  *** Contents of shared directory: ***
[2025-11-20 22:48:40] total 1323364
[2025-11-20 22:48:40] -rw-r--r--. 2 boinc boinc 409831024 Nov 19 21:23 ATLAS.root_0
[2025-11-20 22:48:40] -rw-r--r--. 2 boinc boinc     15120 Nov 19 21:23 start_atlas.sh
[2025-11-20 22:48:40] -rw-r--r--. 2 boinc boinc    590100 Nov 19 21:23 input.tar.gz
[2025-11-20 22:48:40] -rw-------. 1 boinc boinc 929960479 Nov 20 22:45 HITS.pool.root.1
[2025-11-20 22:48:40] -rw-------. 1 boinc boinc  14714880 Nov 20 22:48 result.tar.gz
22:48:42 (25018): run_atlas exited; CPU time 339180.990907
22:48:42 (25018): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN