Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
22:33:20 (22075): wrapper (7.7.26015): starting
22:33:20 (22075): wrapper: running run_atlas (--nthreads 8)
[2025-11-21 22:33:20] Arguments: --nthreads 8
[2025-11-21 22:33:20] Threads: 8
[2025-11-21 22:33:20] Checking for CVMFS
[2025-11-21 22:33:20] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-21 22:33:20] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-21 22:33:20] Running cvmfs_config stat atlas.cern.ch
[2025-11-21 22:33:21] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-21 22:33:21] 2.11.2.0 18458 278552 146128 153143 3 128 20076393 25165825 3959 130560 2 124146300 99.877 76701504 3061 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-11-21 22:33:21] CVMFS is ok
[2025-11-21 22:33:21] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-21 22:33:21] Checking for apptainer binary...
[2025-11-21 22:33:22] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-21 22:33:22] Running /usr/bin/apptainer --version
[2025-11-21 22:33:22] apptainer version 1.3.2-1.el7
[2025-11-21 22:33:22] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-21 22:33:24] cg-vwn434.simple-grid.lan
[2025-11-21 22:33:24] apptainer works
[2025-11-21 22:33:24] Set ATHENA_PROC_NUMBER=8
[2025-11-21 22:33:24] Set ATHENA_CORE_NUMBER=8
[2025-11-21 22:33:24] Starting ATLAS job with PandaID=6891577326
[2025-11-21 22:33:24] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-22 23:43:27]  *** The last 200 lines of the pilot log: ***
[2025-11-22 23:43:27] 2025-11-22 22:42:32,661 | INFO     | fitting pss+swap vs Time
[2025-11-22 23:43:27] 2025-11-22 22:42:32,664 | INFO     | sum of square deviations: 999121350608.2748
[2025-11-22 23:43:27] 2025-11-22 22:42:32,678 | INFO     | time since job start (90414s) is within the limit (172800.0s)
[2025-11-22 23:43:27] 2025-11-22 22:42:32,777 | INFO     | sum of deviations: 3633309271958.0786
[2025-11-22 23:43:27] 2025-11-22 22:42:32,778 | INFO     | mean x: 1763806214.4312797
[2025-11-22 23:43:27] 2025-11-22 22:42:32,778 | INFO     | mean y: 2857920.3703452945
[2025-11-22 23:43:27] 2025-11-22 22:42:32,778 | INFO     | intersect: -6411231288.041545
[2025-11-22 23:43:27] 2025-11-22 22:42:32,780 | INFO     | chi2: 11.153695231958398
[2025-11-22 23:43:27] 2025-11-22 22:42:32,782 | INFO     | sum of square deviations: 989009470877.9982
[2025-11-22 23:43:27] 2025-11-22 22:42:32,859 | INFO     | sum of deviations: 4116078792079.7734
[2025-11-22 23:43:27] 2025-11-22 22:42:32,859 | INFO     | mean x: 1763806061.9361413
[2025-11-22 23:43:27] 2025-11-22 22:42:32,859 | INFO     | mean y: 2865202.231657609
[2025-11-22 23:43:27] 2025-11-22 22:42:32,860 | INFO     | intersect: -7337777065.260507
[2025-11-22 23:43:27] 2025-11-22 22:42:32,861 | INFO     | chi2: 8.097752219903063
[2025-11-22 23:43:27] 2025-11-22 22:42:32,862 | INFO     | current chi2=8.097752219903063 (change=27.398480490117926 %)
[2025-11-22 23:43:27] 2025-11-22 22:42:32,864 | INFO     | sum of square deviations: 978966057547.6532
[2025-11-22 23:43:27] 2025-11-22 22:42:32,936 | INFO     | sum of deviations: 4648317419806.145
[2025-11-22 23:43:27] 2025-11-22 22:42:32,936 | INFO     | mean x: 1763805909.4410362
[2025-11-22 23:43:27] 2025-11-22 22:42:32,937 | INFO     | mean y: 2873284.8513974096
[2025-11-22 23:43:27] 2025-11-22 22:42:32,937 | INFO     | intersect: -8372013332.310707
[2025-11-22 23:43:27] 2025-11-22 22:42:32,938 | INFO     | chi2: 4.521600936271776
[2025-11-22 23:43:27] 2025-11-22 22:42:32,939 | INFO     | current chi2=4.521600936271776 (change=44.16227104160637 %)
[2025-11-22 23:43:27] 2025-11-22 22:42:32,941 | INFO     | sum of square deviations: 968990699206.5126
[2025-11-22 23:43:27] 2025-11-22 22:42:33,029 | INFO     | sum of deviations: 4778388520333.266
[2025-11-22 23:43:27] 2025-11-22 22:42:33,030 | INFO     | mean x: 1763805756.9445965
[2025-11-22 23:43:27] 2025-11-22 22:42:33,030 | INFO     | mean y: 2875271.7688098494
[2025-11-22 23:43:27] 2025-11-22 22:42:33,030 | INFO     | intersect: -8694988585.93739
[2025-11-22 23:43:27] 2025-11-22 22:42:33,035 | INFO     | chi2: 4.150636054640166
[2025-11-22 23:43:27] 2025-11-22 22:42:33,036 | INFO     | current chi2=4.150636054640166 (change=8.204281776743532 %)
[2025-11-22 23:43:27] 2025-11-22 22:42:33,036 | INFO     | right removable region: 1461
[2025-11-22 23:43:27] 2025-11-22 22:42:33,038 | INFO     | sum of square deviations: 989008181337.9979
[2025-11-22 23:43:27] 2025-11-22 22:42:33,102 | INFO     | sum of deviations: 3116852846147.3496
[2025-11-22 23:43:27] 2025-11-22 22:42:33,103 | INFO     | mean x: 1763806366.9361413
[2025-11-22 23:43:27] 2025-11-22 22:42:33,103 | INFO     | mean y: 2865705.5251358696
[2025-11-22 23:43:27] 2025-11-22 22:42:33,103 | INFO     | intersect: -5555758579.463387
[2025-11-22 23:43:27] 2025-11-22 22:42:33,105 | INFO     | chi2: 7.911631063975402
[2025-11-22 23:43:27] 2025-11-22 22:42:33,105 | INFO     | current chi2=7.911631063975402 (change=29.067175501564652 %)
[2025-11-22 23:43:27] 2025-11-22 22:42:33,107 | INFO     | sum of square deviations: 978964106284.79
[2025-11-22 23:43:27] 2025-11-22 22:42:33,175 | INFO     | sum of deviations: 2941291912626.107
[2025-11-22 23:43:27] 2025-11-22 22:42:33,176 | INFO     | mean x: 1763806519.4362645
[2025-11-22 23:43:27] 2025-11-22 22:42:33,176 | INFO     | mean y: 2868369.2685753237
[2025-11-22 23:43:27] 2025-11-22 22:42:33,176 | INFO     | intersect: -5296477968.099473
[2025-11-22 23:43:27] 2025-11-22 22:42:33,178 | INFO     | chi2: 7.558500715460251
[2025-11-22 23:43:27] 2025-11-22 22:42:33,178 | INFO     | current chi2=7.558500715460251 (change=4.463432959141446 %)
[2025-11-22 23:43:27] 2025-11-22 22:42:33,178 | INFO     | left removable region: 20
[2025-11-22 23:43:27] 2025-11-22 22:42:33,181 | INFO     | sum of square deviations: 927831607036.7028
[2025-11-22 23:43:27] 2025-11-22 22:42:33,236 | INFO     | sum of deviations: 3878727184350.085
[2025-11-22 23:43:27] 2025-11-22 22:42:33,237 | INFO     | mean x: 1763806336.4503818
[2025-11-22 23:43:27] 2025-11-22 22:42:33,237 | INFO     | mean y: 2889511.3157529496
[2025-11-22 23:43:27] 2025-11-22 22:42:33,237 | INFO     | intersect: -7370564392.640767
[2025-11-22 23:43:27] 2025-11-22 22:42:33,239 | INFO     | chi2: 0.36143266608162883
[2025-11-22 23:43:27] 2025-11-22 22:42:33,239 | INFO     | current memory leak: 4.18 B/s (using 1441 data points, chi2=0.36)
[2025-11-22 23:43:27] 2025-11-22 22:42:33,241 | INFO     | could have reported an average CPU frequency of 1999 MHz (50 samples)
[2025-11-22 23:43:27] 2025-11-22 22:42:33,242 | INFO     | ..............................
[2025-11-22 23:43:27] 2025-11-22 22:42:33,242 | INFO     | . Timing measurements:
[2025-11-22 23:43:27] 2025-11-22 22:42:33,242 | INFO     | . get job = 0 s
[2025-11-22 23:43:27] 2025-11-22 22:42:33,242 | INFO     | . initial setup = 4 s
[2025-11-22 23:43:27] 2025-11-22 22:42:33,242 | INFO     | . payload setup = 37 s
[2025-11-22 23:43:27] 2025-11-22 22:42:33,242 | INFO     | . stage-in = 0 s
[2025-11-22 23:43:27] 2025-11-22 22:42:33,242 | INFO     | . payload execution = 90171 s
[2025-11-22 23:43:27] 2025-11-22 22:42:33,242 | INFO     | . stage-out = 4 s
[2025-11-22 23:43:27] 2025-11-22 22:42:33,242 | INFO     | . log creation = 1 s
[2025-11-22 23:43:27] 2025-11-22 22:42:33,243 | INFO     | ..............................
[2025-11-22 23:43:27] 2025-11-22 22:42:33,623 | INFO     | 
[2025-11-22 23:43:27] 2025-11-22 22:42:33,623 | INFO     | job summary report
[2025-11-22 23:43:27] 2025-11-22 22:42:33,624 | INFO     | --------------------------------------------------
[2025-11-22 23:43:27] 2025-11-22 22:42:33,624 | INFO     | PanDA job id: 6891577326
[2025-11-22 23:43:27] 2025-11-22 22:42:33,624 | INFO     | task id: 47493068
[2025-11-22 23:43:27] 2025-11-22 22:42:33,624 | INFO     | errors: (none)
[2025-11-22 23:43:27] 2025-11-22 22:42:33,624 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-22 23:43:27] 2025-11-22 22:42:33,624 | INFO     | pilot state: finished 
[2025-11-22 23:43:27] 2025-11-22 22:42:33,624 | INFO     | transexitcode: 0
[2025-11-22 23:43:27] 2025-11-22 22:42:33,624 | INFO     | exeerrorcode: 0
[2025-11-22 23:43:27] 2025-11-22 22:42:33,624 | INFO     | exeerrordiag: 
[2025-11-22 23:43:27] 2025-11-22 22:42:33,624 | INFO     | exitcode: 0
[2025-11-22 23:43:27] 2025-11-22 22:42:33,625 | INFO     | exitmsg: OK
[2025-11-22 23:43:27] 2025-11-22 22:42:33,625 | INFO     | cpuconsumptiontime: 332607 s
[2025-11-22 23:43:27] 2025-11-22 22:42:33,625 | INFO     | nevents: 1000
[2025-11-22 23:43:27] 2025-11-22 22:42:33,625 | INFO     | neventsw: 0
[2025-11-22 23:43:27] 2025-11-22 22:42:33,625 | INFO     | pid: 876
[2025-11-22 23:43:27] 2025-11-22 22:42:33,625 | INFO     | pgrp: 876
[2025-11-22 23:43:27] 2025-11-22 22:42:33,625 | INFO     | corecount: 8
[2025-11-22 23:43:27] 2025-11-22 22:42:33,625 | INFO     | event service: False
[2025-11-22 23:43:27] 2025-11-22 22:42:33,625 | INFO     | sizes: {0: 2297968, 1: 2298653, 2: 2298852, 13: 2298852, 23: 2298908, 34: 2298936, 45: 2299092, 56: 2299120, 66: 2299148, 77: 2299176, 82: 2299494, 88: 2299830, 90
[2025-11-22 23:43:27] 2025-11-22 22:42:33,625 | INFO     | --------------------------------------------------
[2025-11-22 23:43:27] 2025-11-22 22:42:33,625 | INFO     | 
[2025-11-22 23:43:27] 2025-11-22 22:42:33,626 | INFO     | executing command: ls -lF /var/lib/boinc/slots/7
[2025-11-22 23:43:27] 2025-11-22 22:42:33,972 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-22 23:43:27] 2025-11-22 22:42:33,972 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-22 23:43:27] 2025-11-22 22:42:33,972 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-22 23:43:27] 2025-11-22 22:42:33,972 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-22 23:43:27] 2025-11-22 22:42:33,972 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-22 23:43:27] 2025-11-22 22:42:33,972 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-22 23:43:27] 2025-11-22 22:42:33,973 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-22 23:43:27] 2025-11-22 22:42:33,973 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-22 23:43:27] 2025-11-22 22:42:33,973 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-22 23:43:27] 2025-11-22 22:42:33,973 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-22 23:43:27] 2025-11-22 22:42:33,973 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-22 23:43:27] 2025-11-22 22:42:33,973 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-22 23:43:27] 2025-11-22 22:42:33,973 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-22 23:43:27] 2025-11-22 22:42:33,973 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-22 23:43:27] 2025-11-22 22:42:33,973 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-22 23:43:27] 2025-11-22 22:42:33,973 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-22 23:43:27] 2025-11-22 22:42:33,973 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-22 23:43:27] 2025-11-22 22:42:33,974 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-22 23:43:27] 2025-11-22 22:42:33,974 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-22 23:43:27] 2025-11-22 22:42:33,974 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-22 23:43:27] 2025-11-22 22:42:33,974 | INFO     | job 6891577326 has completed (purged errors)
[2025-11-22 23:43:27] 2025-11-22 22:42:33,974 | INFO     | overall cleanup function is called
[2025-11-22 23:43:27] 2025-11-22 22:42:34,999 | INFO     | --- collectZombieJob: --- 10, [876]
[2025-11-22 23:43:27] 2025-11-22 22:42:34,999 | INFO     | zombie collector waiting for pid 876
[2025-11-22 23:43:27] 2025-11-22 22:42:35,000 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-22 23:43:27] 2025-11-22 22:42:35,000 | INFO     | collected zombie processes
[2025-11-22 23:43:27] 2025-11-22 22:42:35,000 | INFO     | will attempt to kill all subprocesses of pid=876
[2025-11-22 23:43:27] 2025-11-22 22:42:35,122 | INFO     | process IDs to be killed: [876] (in reverse order)
[2025-11-22 23:43:27] 2025-11-22 22:42:35,875 | WARNING  | found no corresponding commands to process id(s)
[2025-11-22 23:43:27] 2025-11-22 22:42:35,875 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-22 23:43:27] 2025-11-22 22:42:35,879 | INFO     | did not find any defunct processes belonging to 876
[2025-11-22 23:43:27] 2025-11-22 22:42:35,883 | INFO     | did not find any defunct processes belonging to 876
[2025-11-22 23:43:27] 2025-11-22 22:42:35,925 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-22 23:43:27] 2025-11-22 22:42:35,926 | INFO     | ready for new job
[2025-11-22 23:43:27] 2025-11-22 22:42:35,926 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-22 23:43:27] 2025-11-22 22:42:35,933 | INFO     | ***************************************
[2025-11-22 23:43:27] 2025-11-22 22:42:35,934 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-22 23:43:27] 2025-11-22 22:42:35,934 | INFO     | ***************************************
[2025-11-22 23:43:27] 2025-11-22 22:42:35,934 | INFO     | 
[2025-11-22 23:43:27] 2025-11-22 22:42:35,934 | INFO     | pilot is running in a VM
[2025-11-22 23:43:27] 2025-11-22 22:42:35,935 | INFO     | architecture information:
[2025-11-22 23:43:27] 2025-11-22 22:42:35,945 | INFO     | executing command: cat /etc/os-release
[2025-11-22 23:43:27] 2025-11-22 22:42:36,249 | INFO     | cat /etc/os-release:
[2025-11-22 23:43:27] NAME="CentOS Linux"
[2025-11-22 23:43:27] VERSION="7 (Core)"
[2025-11-22 23:43:27] ID="centos"
[2025-11-22 23:43:27] ID_LIKE="rhel fedora"
[2025-11-22 23:43:27] VERSION_ID="7"
[2025-11-22 23:43:27] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-22 23:43:27] ANSI_COLOR="0;31"
[2025-11-22 23:43:27] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-22 23:43:27] HOME_URL="https://www.centos.org/"
[2025-11-22 23:43:27] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-22 23:43:27] 
[2025-11-22 23:43:27] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-22 23:43:27] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-22 23:43:27] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-22 23:43:27] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-22 23:43:27] 
[2025-11-22 23:43:27] 2025-11-22 22:42:36,249 | INFO     | ***************************************
[2025-11-22 23:43:27] 2025-11-22 22:42:36,751 | INFO     | executing command: df -mP /var/lib/boinc/slots/7
[2025-11-22 23:43:27] 2025-11-22 22:42:36,936 | INFO     | sufficient remaining disk space (491146706944 B)
[2025-11-22 23:43:27] 2025-11-22 22:42:36,936 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-22 23:43:27] 2025-11-22 22:42:36,936 | INFO     | current server update state: UPDATING_FINAL
[2025-11-22 23:43:27] 2025-11-22 22:42:36,936 | INFO     | update_server=False
[2025-11-22 23:43:27] 2025-11-22 22:42:36,937 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-22 23:43:27] 2025-11-22 22:42:36,937 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-22 23:43:27] 2025-11-22 22:42:36,960 | INFO     | all job control threads have been joined
[2025-11-22 23:43:27] 2025-11-22 22:42:37,148 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-22 23:43:27] 2025-11-22 22:42:37,149 | INFO     | aborting loop
[2025-11-22 23:43:27] 2025-11-22 22:42:37,196 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-22 23:43:27] 2025-11-22 22:42:37,364 | INFO     | all data control threads have been joined
[2025-11-22 23:43:27] 2025-11-22 22:42:37,842 | INFO     | all payload control threads have been joined
[2025-11-22 23:43:27] 2025-11-22 22:42:37,942 | INFO     | [job] retrieve thread has finished
[2025-11-22 23:43:27] 2025-11-22 22:42:37,951 | INFO     | [job] create_data_payload thread has finished
[2025-11-22 23:43:27] 2025-11-22 22:42:37,966 | INFO     | [job] control thread has finished
[2025-11-22 23:43:27] 2025-11-22 22:42:38,047 | INFO     | [payload] failed_post thread has finished
[2025-11-22 23:43:27] 2025-11-22 22:42:38,150 | INFO     | [payload] validate_pre thread has finished
[2025-11-22 23:43:27] 2025-11-22 22:42:38,154 | INFO     | [job] job monitor thread has finished
[2025-11-22 23:43:27] 2025-11-22 22:42:38,370 | INFO     | [data] control thread has finished
[2025-11-22 23:43:27] 2025-11-22 22:42:38,389 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-22 23:43:27] 2025-11-22 22:42:38,612 | INFO     | [data] copytool_in thread has finished
[2025-11-22 23:43:27] 2025-11-22 22:42:38,848 | INFO     | [payload] control thread has finished
[2025-11-22 23:43:27] 2025-11-22 22:42:38,943 | INFO     | [data] copytool_out thread has finished
[2025-11-22 23:43:27] 2025-11-22 22:42:38,950 | INFO     | [payload] execute_payloads thread has finished
[2025-11-22 23:43:27] 2025-11-22 22:42:39,087 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-22 23:43:27] 2025-11-22 22:42:39,158 | INFO     | [job] validate thread has finished
[2025-11-22 23:43:27] 2025-11-22 22:42:39,395 | INFO     | [job] queue monitor thread has finished
[2025-11-22 23:43:27] 2025-11-22 22:42:39,414 | INFO     | [payload] validate_post thread has finished
[2025-11-22 23:43:27] 2025-11-22 22:42:41,206 | INFO     | [data] queue_monitor thread has finished
[2025-11-22 23:43:27] 2025-11-22 22:43:05,893 | INFO     | PID=26068 has CPU usage=2.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-22 23:43:27] 2025-11-22 22:43:05,894 | INFO     | .. there are 9 such processes running
[2025-11-22 23:43:27] 2025-11-22 22:43:05,894 | INFO     | found 0 job(s) in 20 queues
[2025-11-22 23:43:27] 2025-11-22 22:43:05,894 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-22 23:43:27] 2025-11-22 22:43:05,894 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-22 23:43:27] 2025-11-22 22:43:15,958 | INFO     | [monitor] cgroup control has ended
[2025-11-22 23:43:27] 2025-11-22 22:43:17,365 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140521002370880)>', '<ExcThread(monitor, started 140520550541056)>']
[2025-11-22 23:43:27] 2025-11-22 22:43:17,966 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-22 23:43:27] 2025-11-22 22:43:17,967 | INFO     | [monitor] control thread has ended
[2025-11-22 23:43:27] 2025-11-22 22:43:22,391 | INFO     | all workflow threads have been joined
[2025-11-22 23:43:27] 2025-11-22 22:43:22,392 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-22 23:43:27] 2025-11-22 22:43:22,392 | INFO     | traces error code: 0
[2025-11-22 23:43:27] 2025-11-22 22:43:22,392 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-22 23:43:27] 2025-11-22 22:43:22,859 [wrapper] ==== pilot stdout END ====
[2025-11-22 23:43:27] 2025-11-22 22:43:22,963 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-22 23:43:27] 2025-11-22 22:43:23,037 [wrapper] pilotpid: 26068
[2025-11-22 23:43:27] 2025-11-22 22:43:23,204 [wrapper] Pilot exit status: 0
[2025-11-22 23:43:27] 2025-11-22 22:43:23,563 [wrapper] pandaids: 6891577326
[2025-11-22 23:43:27] 2025-11-22 22:43:24,601 [wrapper] cleanup supervisor_pilot 21995 26069
[2025-11-22 23:43:27] 2025-11-22 22:43:24,705 [wrapper] Test setup, not cleaning
[2025-11-22 23:43:27] 2025-11-22 22:43:24,828 [wrapper] apfmon messages muted
[2025-11-22 23:43:27] 2025-11-22 22:43:24,939 [wrapper] ==== wrapper stdout END ====
[2025-11-22 23:43:27] 2025-11-22 22:43:25,043 [wrapper] ==== wrapper stderr END ====
[2025-11-22 23:43:27]  *** Error codes and diagnostics ***
[2025-11-22 23:43:27]     "exeErrorCode": 0,
[2025-11-22 23:43:27]     "exeErrorDiag": "",
[2025-11-22 23:43:27]     "pilotErrorCode": 0,
[2025-11-22 23:43:27]     "pilotErrorDiag": "",
[2025-11-22 23:43:27]  *** Listing of results directory ***
[2025-11-22 23:43:27] total 1309760
[2025-11-22 23:43:27] -rw-r--r--. 1 boinc boinc    576529 Nov 18 17:24 pilot3.tar.gz
[2025-11-22 23:43:27] -rw-r--r--. 1 boinc boinc      5112 Nov 18 17:43 queuedata.json
[2025-11-22 23:43:27] -rwx------. 1 boinc boinc     36292 Nov 18 17:44 runpilot2-wrapper.sh
[2025-11-22 23:43:27] -rw-r--r--. 1 boinc boinc       100 Nov 21 22:33 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-22 23:43:27] -rwxr-xr-x. 1 boinc boinc      7986 Nov 21 22:33 run_atlas
[2025-11-22 23:43:27] -rw-r--r--. 1 boinc boinc       105 Nov 21 22:33 job.xml
[2025-11-22 23:43:27] -rw-r--r--. 2 boinc boinc 407939823 Nov 21 22:33 EVNT.47493065._000380.pool.root.1
[2025-11-22 23:43:27] -rw-r--r--. 1 boinc boinc      6390 Nov 21 22:33 init_data.xml
[2025-11-22 23:43:27] -rw-r--r--. 2 boinc boinc     15120 Nov 21 22:33 start_atlas.sh
[2025-11-22 23:43:27] drwxrwx--x. 2 boinc boinc        68 Nov 21 22:33 shared
[2025-11-22 23:43:27] -rw-r--r--. 2 boinc boinc    590096 Nov 21 22:33 input.tar.gz
[2025-11-22 23:43:27] -rw-r--r--. 1 boinc boinc         0 Nov 21 22:33 boinc_lockfile
[2025-11-22 23:43:27] -rw-r--r--. 1 boinc boinc      2773 Nov 21 22:33 pandaJob.out
[2025-11-22 23:43:27] -rw-------. 1 boinc boinc    989798 Nov 21 22:35 agis_schedconf.cvmfs.json
[2025-11-22 23:43:27] drwx------. 5 boinc boinc      4096 Nov 21 22:35 pilot3
[2025-11-22 23:43:27] -rw-r--r--. 1 boinc boinc       533 Nov 22 23:25 boinc_task_state.xml
[2025-11-22 23:43:27] -rw-------. 1 boinc boinc 900191038 Nov 22 23:40 HITS.47493068._003795.pool.root.1
[2025-11-22 23:43:27] -rw-------. 1 boinc boinc      1030 Nov 22 23:41 memory_monitor_summary.json
[2025-11-22 23:43:27] -rw-------. 1 boinc boinc   1526164 Nov 22 23:41 agis_ddmendpoints.agis.ALL.json
[2025-11-22 23:43:27] -rw-------. 1 boinc boinc   2552611 Nov 22 23:41 log.47493068._003795.job.log.tgz.1
[2025-11-22 23:43:27] -rw-------. 1 boinc boinc        95 Nov 22 23:42 pilot_heartbeat.json
[2025-11-22 23:43:27] -rw-------. 1 boinc boinc      8626 Nov 22 23:42 heartbeat.json
[2025-11-22 23:43:27] -rw-r--r--. 1 boinc boinc      8192 Nov 22 23:43 boinc_mmap_file
[2025-11-22 23:43:27] -rw-r--r--. 1 boinc boinc        29 Nov 22 23:43 wrapper_checkpoint.txt
[2025-11-22 23:43:27] -rw-------. 1 boinc boinc      4884 Nov 22 23:43 pilotlog.txt
[2025-11-22 23:43:27] -rw-------. 1 boinc boinc  12024582 Nov 22 23:43 log.47493068._003795.job.log.1
[2025-11-22 23:43:27] -rw-------. 1 boinc boinc       353 Nov 22 23:43 output.list
[2025-11-22 23:43:27] -rw-r--r--. 1 boinc boinc       620 Nov 22 23:43 runtime_log
[2025-11-22 23:43:27] -rw-------. 1 boinc boinc  14592000 Nov 22 23:43 result.tar.gz
[2025-11-22 23:43:27] -rw-r--r--. 1 boinc boinc      8703 Nov 22 23:43 runtime_log.err
[2025-11-22 23:43:27] -rw-------. 1 boinc boinc       662 Nov 22 23:43 2IUNDmhzdf8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmgsFKDm6endSm.diag
[2025-11-22 23:43:27] -rw-r--r--. 1 boinc boinc     20828 Nov 22 23:43 stderr.txt
[2025-11-22 23:43:27] HITS file was successfully produced:
[2025-11-22 23:43:27] -rw-------. 1 boinc boinc 900191038 Nov 22 23:40 shared/HITS.pool.root.1
[2025-11-22 23:43:27]  *** Contents of shared directory: ***
[2025-11-22 23:43:27] total 1292324
[2025-11-22 23:43:27] -rw-r--r--. 2 boinc boinc 407939823 Nov 21 22:33 ATLAS.root_0
[2025-11-22 23:43:27] -rw-r--r--. 2 boinc boinc     15120 Nov 21 22:33 start_atlas.sh
[2025-11-22 23:43:27] -rw-r--r--. 2 boinc boinc    590096 Nov 21 22:33 input.tar.gz
[2025-11-22 23:43:27] -rw-------. 1 boinc boinc 900191038 Nov 22 23:40 HITS.pool.root.1
[2025-11-22 23:43:27] -rw-------. 1 boinc boinc  14592000 Nov 22 23:43 result.tar.gz
23:43:28 (22075): run_atlas exited; CPU time 333102.914050
23:43:28 (22075): called boinc_finish(0)

</stderr_txt>
]]>

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