Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
10:19:13 (2759351): wrapper (7.7.26015): starting
10:19:13 (2759351): wrapper: running run_atlas (--nthreads 8)
[2025-11-18 10:19:13] Arguments: --nthreads 8
[2025-11-18 10:19:13] Threads: 8
[2025-11-18 10:19:13] Checking for CVMFS
[2025-11-18 10:19:13] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-18 10:19:13] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-18 10:19:13] Running cvmfs_config stat atlas.cern.ch
[2025-11-18 10:19:14] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-18 10:19:14] 2.11.3.0 1070807 17215 227292 153009 3 314 35052070 45568001 8978 130560 0 117690311 99.808 60878439 18407 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.163:3129 1
[2025-11-18 10:19:14] CVMFS is ok
[2025-11-18 10:19:14] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-18 10:19:14] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-18 10:19:14] Further information can be found at the LHC@home message board.
[2025-11-18 10:19:14] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-18 10:19:14] Checking for apptainer binary...
[2025-11-18 10:19:14] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-18 10:19:14] Running /usr/bin/apptainer --version
[2025-11-18 10:19:14] apptainer version 1.4.1-1.el9
[2025-11-18 10:19:14] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-18 10:19:14] wns0007.triumf.lcg
[2025-11-18 10:19:14] apptainer works
[2025-11-18 10:19:14] Set ATHENA_PROC_NUMBER=8
[2025-11-18 10:19:14] Set ATHENA_CORE_NUMBER=8
[2025-11-18 10:19:14] Starting ATLAS job with PandaID=6891576679
[2025-11-18 10:19:14] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-18 10:32:38]  *** The last 200 lines of the pilot log: ***
[2025-11-18 10:32:38] 2025-11-18 18:32:01,756 | WARNING  | wrong length of table data, x=[1763490175.0, 1763490236.0, 1763490297.0, 1763490358.0, 1763490420.0, 1763490480.0, 1763490541.0], y=[1995.0, 410920.0, 565258.0, 64
[2025-11-18 10:32:38] 2025-11-18 18:32:01,756 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2025-11-18 10:32:38] 2025-11-18 18:32:01,757 | INFO     | ..............................
[2025-11-18 10:32:38] 2025-11-18 18:32:01,757 | INFO     | . Timing measurements:
[2025-11-18 10:32:38] 2025-11-18 18:32:01,757 | INFO     | . get job = 0 s
[2025-11-18 10:32:38] 2025-11-18 18:32:01,757 | INFO     | . initial setup = 6 s
[2025-11-18 10:32:38] 2025-11-18 18:32:01,757 | INFO     | . payload setup = 28 s
[2025-11-18 10:32:38] 2025-11-18 18:32:01,757 | INFO     | . stage-in = 0 s
[2025-11-18 10:32:38] 2025-11-18 18:32:01,757 | INFO     | . payload execution = 445 s
[2025-11-18 10:32:38] 2025-11-18 18:32:01,757 | INFO     | . stage-out = 1 s
[2025-11-18 10:32:38] 2025-11-18 18:32:01,757 | INFO     | . log creation = 0 s
[2025-11-18 10:32:38] 2025-11-18 18:32:01,757 | INFO     | ..............................
[2025-11-18 10:32:38] 2025-11-18 18:32:01,757 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-18 10:32:38] 2025-11-18 18:32:01,758 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6891576679/pilotlog.txt
[2025-11-18 10:32:38] 2025-11-18 18:32:01,771 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-11-18 10:32:38] - Log from pilotlog.txt -
[2025-11-18 10:32:38] 2025-11-18 18:32:01,754 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6891576679/memory_monitor_summary.json (trf name=prmon)
[2025-11-18 10:32:38] 2025-11-18 18:32:01,755 | INFO     | extracted standard info from prmon json
[2025-11-18 10:32:38] 2025-11-18 18:32:01,755 | INFO     | extracted standard memory fields from prmon json
[2025-11-18 10:32:38] 2025-11-18 18:32:01,755 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-18 10:32:38] 2025-11-18 18:32:01,755 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-11-18 10:32:38] 2025-11-18 18:32:01,755 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-18 10:32:38] 2025-11-18 18:32:01,756 | WARNING  | wrong length of table data, x=[1763490175.0, 1763490236.0, 1763490297.0, 1763490358.0, 1763490420.0, 1763490480.0, 1763490541.0], y=[1995.0, 410920.0, 565258.0, 64
[2025-11-18 10:32:38] 2025-11-18 18:32:01,756 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2025-11-18 10:32:38] 2025-11-18 18:32:01,757 | INFO     | ..............................
[2025-11-18 10:32:38] 2025-11-18 18:32:01,757 | INFO     | . Timing measurements:
[2025-11-18 10:32:38] 2025-11-18 18:32:01,757 | INFO     | . get job = 0 s
[2025-11-18 10:32:38] 2025-11-18 18:32:01,757 | INFO     | . initial setup = 6 s
[2025-11-18 10:32:38] 2025-11-18 18:32:01,757 | INFO     | . payload setup = 28 s
[2025-11-18 10:32:38] 2025-11-18 18:32:01,757 | INFO     | . stage-in = 0 s
[2025-11-18 10:32:38] 2025-11-18 18:32:01,757 | INFO     | . payload execution = 445 s
[2025-11-18 10:32:38] 2025-11-18 18:32:01,757 | INFO     | . stage-out = 1 s
[2025-11-18 10:32:38] 2025-11-18 18:32:01,757 | INFO     | . log creation = 0 s
[2025-11-18 10:32:38] 2025-11-18 18:32:01,757 | INFO     | ..............................
[2025-11-18 10:32:38] 2025-11-18 18:32:01,757 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-18 10:32:38] 2025-11-18 18:32:01,758 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6891576679/pilotlog.txt
[2025-11-18 10:32:38] 2025-11-18 18:32:01,771 | WARNING  | 
[2025-11-18 10:32:38] [begin log extracts]
[2025-11-18 10:32:38] - Log from pilotlog.txt -
[2025-11-18 10:32:38] 2025-11-18 18:32:01,754 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6891576679/memory_monitor_summary.json (trf name=prmon)
[2025-11-18 10:32:38] 2025-11-18 18:32:01,755 | INFO     | extracted standard info from prmon json
[2025-11-18 10:32:38] 2025-11-18 18:32:01,755 | INFO     | extracted standard memory fields from prmon json
[2025-11-18 10:32:38] 2025-11-18 18:32:01,755 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-18 10:32:38] 2025-11-18 18:32:01,755 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-11-18 10:32:38] 2025-11-18 18:32:01,755 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-18 10:32:38] 2025-11-18 18:32:01,756 | WARNING  | wrong length of table data, x=[1763490175.0, 1763490236.0, 1763490297.0, 1763490358.0, 1763490420.0, 1763490480.0, 1763490541.0], y=[1995.0, 410920.0, 565258.0, 64
[2025-11-18 10:32:38] 2025-11-18 18:32:01,756 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2025-11-18 10:32:38] 2025-11-18 18:32:01,757 | INFO     | ..............................
[2025-11-18 10:32:38] 2025-11-18 18:32:01,757 | INFO     | . Timing measurements:
[2025-11-18 10:32:38] 2025-11-18 18:32:01,757 | INFO     | . get job = 0 s
[2025-11-18 10:32:38] 2025-11-18 18:32:01,757 | INFO     | . initial setup = 6 s
[2025-11-18 10:32:38] 2025-11-18 18:32:01,757 | INFO     | . payload setup = 28 s
[2025-11-18 10:32:38] 2025-11-18 18:32:01,757 | INFO     | . stage-in = 0 s
[2025-11-18 10:32:38] 2025-11-18 18:32:01,757 | INFO     | . payload execution = 445 s
[2025-11-18 10:32:38] 2025-11-18 18:32:01,757 | INFO     | . stage-out = 1 s
[2025-11-18 10:32:38] 2025-11-18 18:32:01,757 | INFO     | . log creation = 0 s
[2025-11-18 10:32:38] 2025-11-18 18:32:01,757 | INFO     | ..............................
[2025-11-18 10:32:38] 2025-11-18 18:32:01,757 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-18 10:32:38] 2025-11-18 18:32:01,758 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6891576679/pilotlog.txt
[2025-11-18 10:32:38] [end log extracts]
[2025-11-18 10:32:38] 2025-11-18 18:32:01,771 | WARNING  | pilotErrorCodes = [1305, 1165] (will report primary/first error code)
[2025-11-18 10:32:38] 2025-11-18 18:32:01,772 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-11-18 10:32:38] 2025-11-18 18:32:02,005 | INFO     | time since job start (703s) is within the limit (172800.0s)
[2025-11-18 10:32:38] 2025-11-18 18:32:02,069 | INFO     | 
[2025-11-18 10:32:38] 2025-11-18 18:32:02,069 | INFO     | job summary report
[2025-11-18 10:32:38] 2025-11-18 18:32:02,069 | INFO     | --------------------------------------------------
[2025-11-18 10:32:38] 2025-11-18 18:32:02,069 | INFO     | PanDA job id: 6891576679
[2025-11-18 10:32:38] 2025-11-18 18:32:02,069 | INFO     | task id: 47493068
[2025-11-18 10:32:38] 2025-11-18 18:32:02,070 | INFO     | error 1/2: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-11-18 10:29:25,725 CRITICAL Transform executor raised TransformValidationExceptio
[2025-11-18 10:32:38] 2025-11-18 18:32:02,070 | INFO     | error 2/2: 1165: Local output file is missing
[2025-11-18 10:32:38] 2025-11-18 18:32:02,070 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-18 10:32:38] 2025-11-18 18:32:02,070 | INFO     | pilot state: failed 
[2025-11-18 10:32:38] 2025-11-18 18:32:02,070 | INFO     | transexitcode: 65
[2025-11-18 10:32:38] 2025-11-18 18:32:02,070 | INFO     | exeerrorcode: 65
[2025-11-18 10:32:38] 2025-11-18 18:32:02,070 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: "IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFL
[2025-11-18 10:32:38] 2025-11-18 18:32:02,070 | INFO     | exitcode: 65
[2025-11-18 10:32:38] 2025-11-18 18:32:02,070 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: "IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 
[2025-11-18 10:32:38] 2025-11-18 18:32:02,070 | INFO     | cpuconsumptiontime: 57 s
[2025-11-18 10:32:38] 2025-11-18 18:32:02,070 | INFO     | nevents: 0
[2025-11-18 10:32:38] 2025-11-18 18:32:02,070 | INFO     | neventsw: 0
[2025-11-18 10:32:38] 2025-11-18 18:32:02,070 | INFO     | pid: 2770081
[2025-11-18 10:32:38] 2025-11-18 18:32:02,071 | INFO     | pgrp: 2770081
[2025-11-18 10:32:38] 2025-11-18 18:32:02,071 | INFO     | corecount: 8
[2025-11-18 10:32:38] 2025-11-18 18:32:02,071 | INFO     | event service: False
[2025-11-18 10:32:38] 2025-11-18 18:32:02,071 | INFO     | sizes: {0: 2296372, 1: 2296970, 2: 2297082, 3: 2297082, 4: 2297281, 5: 2297309, 17: 2297493, 28: 2297521, 39: 2297549, 50: 2297577, 53: 2297867, 61: 2298175, 478: 
[2025-11-18 10:32:38] 2025-11-18 18:32:02,071 | INFO     | --------------------------------------------------
[2025-11-18 10:32:38] 2025-11-18 18:32:02,071 | INFO     | 
[2025-11-18 10:32:38] 2025-11-18 18:32:02,071 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-11-18 10:32:38] 2025-11-18 18:32:02,236 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-18 10:32:38] 2025-11-18 18:32:02,237 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-18 10:32:38] 2025-11-18 18:32:02,237 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-18 10:32:38] 2025-11-18 18:32:02,237 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-18 10:32:38] 2025-11-18 18:32:02,237 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-18 10:32:38] 2025-11-18 18:32:02,237 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-18 10:32:38] 2025-11-18 18:32:02,237 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-18 10:32:38] 2025-11-18 18:32:02,237 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-18 10:32:38] 2025-11-18 18:32:02,237 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-18 10:32:38] 2025-11-18 18:32:02,237 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-18 10:32:38] 2025-11-18 18:32:02,237 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-18 10:32:38] 2025-11-18 18:32:02,238 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-18 10:32:38] 2025-11-18 18:32:02,238 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-18 10:32:38] 2025-11-18 18:32:02,238 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-18 10:32:38] 2025-11-18 18:32:02,238 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-18 10:32:38] 2025-11-18 18:32:02,238 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-18 10:32:38] 2025-11-18 18:32:02,238 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-18 10:32:38] 2025-11-18 18:32:02,238 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-18 10:32:38] 2025-11-18 18:32:02,238 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-18 10:32:38] 2025-11-18 18:32:02,238 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-18 10:32:38] 2025-11-18 18:32:02,238 | INFO     | job 6891576679 has completed (purged errors)
[2025-11-18 10:32:38] 2025-11-18 18:32:02,238 | INFO     | overall cleanup function is called
[2025-11-18 10:32:38] 2025-11-18 18:32:03,279 | INFO     | --- collectZombieJob: --- 10, [2770081]
[2025-11-18 10:32:38] 2025-11-18 18:32:03,279 | INFO     | zombie collector waiting for pid 2770081
[2025-11-18 10:32:38] 2025-11-18 18:32:03,279 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-18 10:32:38] 2025-11-18 18:32:03,279 | INFO     | collected zombie processes
[2025-11-18 10:32:38] 2025-11-18 18:32:03,279 | INFO     | will attempt to kill all subprocesses of pid=2770081
[2025-11-18 10:32:38] 2025-11-18 18:32:04,534 | INFO     | process IDs to be killed: [2770081] (in reverse order)
[2025-11-18 10:32:38] 2025-11-18 18:32:05,091 | WARNING  | found no corresponding commands to process id(s)
[2025-11-18 10:32:38] 2025-11-18 18:32:05,092 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-18 10:32:38] 2025-11-18 18:32:05,171 | INFO     | did not find any defunct processes belonging to 2770081
[2025-11-18 10:32:38] 2025-11-18 18:32:05,311 | INFO     | did not find any defunct processes belonging to 2770081
[2025-11-18 10:32:38] 2025-11-18 18:32:05,312 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-18 10:32:38] 2025-11-18 18:32:05,356 | INFO     | ready for new job
[2025-11-18 10:32:38] 2025-11-18 18:32:05,356 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-18 10:32:38] 2025-11-18 18:32:05,359 | INFO     | ***************************************
[2025-11-18 10:32:38] 2025-11-18 18:32:05,359 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-18 10:32:38] 2025-11-18 18:32:05,359 | INFO     | ***************************************
[2025-11-18 10:32:38] 2025-11-18 18:32:05,359 | INFO     | 
[2025-11-18 10:32:38] 2025-11-18 18:32:05,361 | INFO     | architecture information:
[2025-11-18 10:32:38] 2025-11-18 18:32:05,432 | INFO     | executing command: cat /etc/os-release
[2025-11-18 10:32:38] 2025-11-18 18:32:05,606 | INFO     | cat /etc/os-release:
[2025-11-18 10:32:38] NAME="CentOS Linux"
[2025-11-18 10:32:38] VERSION="7 (Core)"
[2025-11-18 10:32:38] ID="centos"
[2025-11-18 10:32:38] ID_LIKE="rhel fedora"
[2025-11-18 10:32:38] VERSION_ID="7"
[2025-11-18 10:32:38] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-18 10:32:38] ANSI_COLOR="0;31"
[2025-11-18 10:32:38] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-18 10:32:38] HOME_URL="https://www.centos.org/"
[2025-11-18 10:32:38] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-18 10:32:38] 
[2025-11-18 10:32:38] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-18 10:32:38] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-18 10:32:38] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-18 10:32:38] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-18 10:32:38] 
[2025-11-18 10:32:38] 2025-11-18 18:32:05,607 | INFO     | ***************************************
[2025-11-18 10:32:38] 2025-11-18 18:32:06,110 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-11-18 10:32:38] 2025-11-18 18:32:06,337 | INFO     | sufficient remaining disk space (1313205125120 B)
[2025-11-18 10:32:38] 2025-11-18 18:32:06,337 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-18 10:32:38] 2025-11-18 18:32:06,338 | INFO     | current server update state: UPDATING_FINAL
[2025-11-18 10:32:38] 2025-11-18 18:32:06,362 | INFO     | update_server=False
[2025-11-18 10:32:38] 2025-11-18 18:32:06,362 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-18 10:32:38] 2025-11-18 18:32:06,431 | INFO     | all data control threads have been joined
[2025-11-18 10:32:38] 2025-11-18 18:32:06,537 | INFO     | all job control threads have been joined
[2025-11-18 10:32:38] 2025-11-18 18:32:06,811 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-18 10:32:38] 2025-11-18 18:32:06,942 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-18 10:32:38] 2025-11-18 18:32:07,145 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-18 10:32:38] 2025-11-18 18:32:07,145 | INFO     | aborting loop
[2025-11-18 10:32:38] 2025-11-18 18:32:07,368 | INFO     | [job] retrieve thread has finished
[2025-11-18 10:32:38] 2025-11-18 18:32:07,394 | INFO     | [payload] execute_payloads thread has finished
[2025-11-18 10:32:38] 2025-11-18 18:32:07,437 | INFO     | [data] control thread has finished
[2025-11-18 10:32:38] 2025-11-18 18:32:07,478 | INFO     | [payload] validate_post thread has finished
[2025-11-18 10:32:38] 2025-11-18 18:32:07,543 | INFO     | [job] control thread has finished
[2025-11-18 10:32:38] 2025-11-18 18:32:07,674 | INFO     | all payload control threads have been joined
[2025-11-18 10:32:38] 2025-11-18 18:32:07,948 | INFO     | [job] queue monitor thread has finished
[2025-11-18 10:32:38] 2025-11-18 18:32:08,115 | INFO     | [payload] validate_pre thread has finished
[2025-11-18 10:32:38] 2025-11-18 18:32:08,123 | INFO     | [job] validate thread has finished
[2025-11-18 10:32:38] 2025-11-18 18:32:08,147 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-18 10:32:38] 2025-11-18 18:32:08,151 | INFO     | [job] job monitor thread has finished
[2025-11-18 10:32:38] 2025-11-18 18:32:08,200 | INFO     | [job] create_data_payload thread has finished
[2025-11-18 10:32:38] 2025-11-18 18:32:08,667 | INFO     | [payload] failed_post thread has finished
[2025-11-18 10:32:38] 2025-11-18 18:32:08,680 | INFO     | [payload] control thread has finished
[2025-11-18 10:32:38] 2025-11-18 18:32:08,714 | INFO     | [data] copytool_in thread has finished
[2025-11-18 10:32:38] 2025-11-18 18:32:08,819 | INFO     | [data] copytool_out thread has finished
[2025-11-18 10:32:38] 2025-11-18 18:32:09,227 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-18 10:32:38] 2025-11-18 18:32:13,236 | INFO     | [data] queue_monitor thread has finished
[2025-11-18 10:32:38] 2025-11-18 18:32:18,730 | INFO     | [monitor] cgroup control has ended
[2025-11-18 10:32:38] 2025-11-18 18:32:19,763 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140714096449344)>', '<ExcThread(monitor, started 140713547241216)>']
[2025-11-18 10:32:38] 2025-11-18 18:32:24,789 | INFO     | all workflow threads have been joined
[2025-11-18 10:32:38] 2025-11-18 18:32:24,789 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-18 10:32:38] 2025-11-18 18:32:24,790 | INFO     | traces error code: 0
[2025-11-18 10:32:38] 2025-11-18 18:32:24,790 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-18 10:32:38] 2025-11-18 18:32:35,786 | INFO     | PID=2763108 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-18 10:32:38] 2025-11-18 18:32:35,786 | INFO     | .. there are 19 such processes running
[2025-11-18 10:32:38] 2025-11-18 18:32:35,806 | INFO     | found 0 job(s) in 20 queues
[2025-11-18 10:32:38] 2025-11-18 18:32:35,807 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-18 10:32:38] 2025-11-18 18:32:35,807 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-18 10:32:38] 2025-11-18 18:32:35,807 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-18 10:32:38] 2025-11-18 18:32:35,807 | INFO     | [monitor] control thread has ended
[2025-11-18 10:32:38] 2025-11-18 18:32:36,579 [wrapper] ==== pilot stdout END ====
[2025-11-18 10:32:38] 2025-11-18 18:32:36,644 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-18 10:32:38] 2025-11-18 18:32:36,682 [wrapper] pilotpid: 2763108
[2025-11-18 10:32:38] 2025-11-18 18:32:36,744 [wrapper] Pilot exit status: 0
[2025-11-18 10:32:38] 2025-11-18 18:32:36,977 [wrapper] pandaids: 6891576679
[2025-11-18 10:32:38] 2025-11-18 18:32:37,419 [wrapper] cleanup supervisor_pilot 2763114 2763109
[2025-11-18 10:32:38] 2025-11-18 18:32:37,467 [wrapper] Test setup, not cleaning
[2025-11-18 10:32:38] 2025-11-18 18:32:37,474 [wrapper] apfmon messages muted
[2025-11-18 10:32:38] 2025-11-18 18:32:37,490 [wrapper] ==== wrapper stdout END ====
[2025-11-18 10:32:38] 2025-11-18 18:32:37,551 [wrapper] ==== wrapper stderr END ====
[2025-11-18 10:32:38]  *** Error codes and diagnostics ***
[2025-11-18 10:32:38]     "exeErrorCode": 65,
[2025-11-18 10:32:38]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: \"IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 cannot be opened - STOP\"",
[2025-11-18 10:32:38]     "pilotErrorCode": 1305,
[2025-11-18 10:32:38]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: \"IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 canno",
[2025-11-18 10:32:38]  *** Listing of results directory ***
[2025-11-18 10:32:38] total 404148
[2025-11-18 10:32:38] -rw-r--r--. 1 boinc boinc    576529 Nov 18 08:24 pilot3.tar.gz
[2025-11-18 10:32:38] -rw-r--r--. 1 boinc boinc      5112 Nov 18 08:43 queuedata.json
[2025-11-18 10:32:38] -rwx------. 1 boinc boinc     36292 Nov 18 08:44 runpilot2-wrapper.sh
[2025-11-18 10:32:38] -rw-r--r--. 1 boinc boinc       100 Nov 18 10:19 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-18 10:32:38] -rwxr-xr-x. 1 boinc boinc      7986 Nov 18 10:19 run_atlas
[2025-11-18 10:32:38] -rw-r--r--. 1 boinc boinc       105 Nov 18 10:19 job.xml
[2025-11-18 10:32:38] -rw-r--r--. 1 boinc boinc      6444 Nov 18 10:19 init_data.xml
[2025-11-18 10:32:38] -rw-r--r--. 2 boinc boinc 409525065 Nov 18 10:19 EVNT.47493065._000378.pool.root.1
[2025-11-18 10:32:38] -rw-r--r--. 2 boinc boinc     15120 Nov 18 10:19 start_atlas.sh
[2025-11-18 10:32:38] drwxrwx--x. 2 boinc boinc      4096 Nov 18 10:19 shared
[2025-11-18 10:32:38] -rw-r--r--. 2 boinc boinc    590097 Nov 18 10:19 input.tar.gz
[2025-11-18 10:32:38] -rw-r--r--. 1 boinc boinc         0 Nov 18 10:19 boinc_lockfile
[2025-11-18 10:32:38] -rw-r--r--. 1 boinc boinc      2773 Nov 18 10:19 pandaJob.out
[2025-11-18 10:32:38] -rw-------. 1 boinc boinc    992798 Nov 18 10:20 agis_schedconf.cvmfs.json
[2025-11-18 10:32:38] -rw-------. 1 boinc boinc   1525063 Nov 18 10:20 agis_ddmendpoints.agis.ALL.json
[2025-11-18 10:32:38] drwx------. 5 boinc boinc      4096 Nov 18 10:20 pilot3
[2025-11-18 10:32:38] -rw-r--r--. 1 boinc boinc       524 Nov 18 10:27 boinc_task_state.xml
[2025-11-18 10:32:38] -rw-------. 1 boinc boinc       996 Nov 18 10:29 memory_monitor_summary.json
[2025-11-18 10:32:38] -rw-------. 1 boinc boinc     53399 Nov 18 10:29 log.47493068._003774.job.log.tgz.1
[2025-11-18 10:32:38] -rw-------. 1 boinc boinc     10334 Nov 18 10:32 heartbeat.json
[2025-11-18 10:32:38] -rw-------. 1 boinc boinc        95 Nov 18 10:32 pilot_heartbeat.json
[2025-11-18 10:32:38] -rw-------. 1 boinc boinc       823 Nov 18 10:32 pilotlog.txt
[2025-11-18 10:32:38] -rw-r--r--. 1 boinc boinc      8192 Nov 18 10:32 boinc_mmap_file
[2025-11-18 10:32:38] -rw-r--r--. 1 boinc boinc        23 Nov 18 10:32 wrapper_checkpoint.txt
[2025-11-18 10:32:38] -rw-------. 1 boinc boinc    149858 Nov 18 10:32 log.47493068._003774.job.log.1
[2025-11-18 10:32:38] -rw-------. 1 boinc boinc       186 Nov 18 10:32 output.list
[2025-11-18 10:32:38] -rw-r--r--. 1 boinc boinc       620 Nov 18 10:32 runtime_log
[2025-11-18 10:32:38] -rw-------. 1 boinc boinc    225280 Nov 18 10:32 result.tar.gz
[2025-11-18 10:32:38] -rw-r--r--. 1 boinc boinc      8526 Nov 18 10:32 runtime_log.err
[2025-11-18 10:32:38] -rw-------. 1 boinc boinc       647 Nov 18 10:32 kc6MDmhzdf8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmOsFKDmJGDeem.diag
[2025-11-18 10:32:38] -rw-r--r--. 1 boinc boinc     22710 Nov 18 10:32 stderr.txt
[2025-11-18 10:32:38] No HITS result produced
[2025-11-18 10:32:38]  *** Contents of shared directory: ***
[2025-11-18 10:32:38] total 400744
[2025-11-18 10:32:38] -rw-r--r--. 2 boinc boinc 409525065 Nov 18 10:19 ATLAS.root_0
[2025-11-18 10:32:38] -rw-r--r--. 2 boinc boinc     15120 Nov 18 10:19 start_atlas.sh
[2025-11-18 10:32:38] -rw-r--r--. 2 boinc boinc    590097 Nov 18 10:19 input.tar.gz
[2025-11-18 10:32:38] -rw-------. 1 boinc boinc    225280 Nov 18 10:32 result.tar.gz
10:32:40 (2759351): run_atlas exited; CPU time 73.012785
10:32:40 (2759351): called boinc_finish(0)

</stderr_txt>
]]>

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