Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
22:29:03 (31299): wrapper (7.7.26015): starting
22:29:03 (31299): wrapper: running run_atlas (--nthreads 8)
[2025-11-20 22:29:03] Arguments: --nthreads 8
[2025-11-20 22:29:03] Threads: 8
[2025-11-20 22:29:03] Checking for CVMFS
[2025-11-20 22:29:04] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-20 22:29:04] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-20 22:29:04] Running cvmfs_config stat atlas.cern.ch
[2025-11-20 22:29:06] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-20 22:29:06] 2.11.2.0 26867 277108 143232 153088 2 308 13415781 25165824 4004 130560 2 132672590 99.877 73566790 2928 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-11-20 22:29:06] CVMFS is ok
[2025-11-20 22:29:06] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-20 22:29:06] Checking for apptainer binary...
[2025-11-20 22:29:06] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-20 22:29:06] Running /usr/bin/apptainer --version
[2025-11-20 22:29:06] apptainer version 1.3.2-1.el7
[2025-11-20 22:29:06] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-20 22:29:11] cg-vwn435.simple-grid.lan
[2025-11-20 22:29:11] apptainer works
[2025-11-20 22:29:11] Set ATHENA_PROC_NUMBER=8
[2025-11-20 22:29:11] Set ATHENA_CORE_NUMBER=8
[2025-11-20 22:29:11] Starting ATLAS job with PandaID=6891558452
[2025-11-20 22:29:11] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-22 00:04:43]  *** The last 200 lines of the pilot log: ***
[2025-11-22 00:04:43] 2025-11-21 23:03:53,724 | INFO     | time since job start (92054s) is within the limit (172800.0s)
[2025-11-22 00:04:43] 2025-11-21 23:03:55,704 | INFO     | monitor loop #6137: job 0:6891558452 is in state 'finished'
[2025-11-22 00:04:43] 2025-11-21 23:03:55,705 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-22 00:04:43] 2025-11-21 23:03:55,732 | INFO     | time since job start (92056s) is within the limit (172800.0s)
[2025-11-22 00:04:43] 2025-11-21 23:03:57,737 | INFO     | time since job start (92058s) is within the limit (172800.0s)
[2025-11-22 00:04:43] 2025-11-21 23:03:58,210 | INFO     | monitor loop #6138: job 0:6891558452 is in state 'finished'
[2025-11-22 00:04:43] 2025-11-21 23:03:58,211 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-22 00:04:43] 2025-11-21 23:03:59,745 | INFO     | time since job start (92060s) is within the limit (172800.0s)
[2025-11-22 00:04:43] 2025-11-21 23:04:00,715 | INFO     | monitor loop #6139: job 0:6891558452 is in state 'finished'
[2025-11-22 00:04:43] 2025-11-21 23:04:00,716 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-22 00:04:43] 2025-11-21 23:04:01,752 | INFO     | time since job start (92062s) is within the limit (172800.0s)
[2025-11-22 00:04:43] 2025-11-21 23:04:03,219 | INFO     | monitor loop #6140: job 0:6891558452 is in state 'finished'
[2025-11-22 00:04:43] 2025-11-21 23:04:03,220 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-22 00:04:43] 2025-11-21 23:04:03,759 | INFO     | time since job start (92064s) is within the limit (172800.0s)
[2025-11-22 00:04:43] 2025-11-21 23:04:05,409 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-22 00:04:43] 2025-11-21 23:04:05,410 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2025-11-22 00:04:43] 2025-11-21 23:04:05,412 | INFO     | using path: /var/lib/boinc/slots/0/PanDA_Pilot-6891558452/memory_monitor_summary.json (trf name=prmon)
[2025-11-22 00:04:43] 2025-11-21 23:04:05,413 | INFO     | extracted standard info from prmon json
[2025-11-22 00:04:43] 2025-11-21 23:04:05,413 | INFO     | extracted standard memory fields from prmon json
[2025-11-22 00:04:43] 2025-11-21 23:04:05,413 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-22 00:04:43] 2025-11-21 23:04:05,446 | INFO     | fitting pss+swap vs Time
[2025-11-22 00:04:43] 2025-11-21 23:04:05,449 | INFO     | sum of square deviations: 1061250971407.3737
[2025-11-22 00:04:43] 2025-11-21 23:04:05,523 | INFO     | sum of deviations: 2728664900666.799
[2025-11-22 00:04:43] 2025-11-21 23:04:05,524 | INFO     | mean x: 1763720168.3264763
[2025-11-22 00:04:43] 2025-11-21 23:04:05,524 | INFO     | mean y: 2869685.3682813537
[2025-11-22 00:04:43] 2025-11-21 23:04:05,525 | INFO     | intersect: -4531968394.9478035
[2025-11-22 00:04:43] 2025-11-21 23:04:05,527 | INFO     | chi2: 14.745694423850185
[2025-11-22 00:04:43] 2025-11-21 23:04:05,529 | INFO     | sum of square deviations: 1050723374391.0471
[2025-11-22 00:04:43] 2025-11-21 23:04:05,594 | INFO     | sum of deviations: 3222000115762.6006
[2025-11-22 00:04:43] 2025-11-21 23:04:05,595 | INFO     | mean x: 1763720015.830892
[2025-11-22 00:04:43] 2025-11-21 23:04:05,595 | INFO     | mean y: 2876830.3921438083
[2025-11-22 00:04:43] 2025-11-21 23:04:05,595 | INFO     | intersect: -5405498231.66774
[2025-11-22 00:04:43] 2025-11-21 23:04:05,597 | INFO     | chi2: 11.645043861498774
[2025-11-22 00:04:43] 2025-11-21 23:04:05,597 | INFO     | current chi2=11.645043861498774 (change=21.027497744265705 %)
[2025-11-22 00:04:43] 2025-11-21 23:04:05,597 | INFO     | right removable region: 1501
[2025-11-22 00:04:43] 2025-11-21 23:04:05,599 | INFO     | sum of square deviations: 1050722155001.0459
[2025-11-22 00:04:43] 2025-11-21 23:04:05,660 | INFO     | sum of deviations: 2237150637341.7363
[2025-11-22 00:04:43] 2025-11-21 23:04:05,661 | INFO     | mean x: 1763720320.830892
[2025-11-22 00:04:43] 2025-11-21 23:04:05,661 | INFO     | mean y: 2876802.0659121173
[2025-11-22 00:04:43] 2025-11-21 23:04:05,661 | INFO     | intersect: -3752357653.645621
[2025-11-22 00:04:43] 2025-11-21 23:04:05,663 | INFO     | chi2: 11.991187995720246
[2025-11-22 00:04:43] 2025-11-21 23:04:05,663 | INFO     | current chi2=11.991187995720246 (change=18.68007262970747 %)
[2025-11-22 00:04:43] 2025-11-21 23:04:05,663 | INFO     | left removable region: 10
[2025-11-22 00:04:43] 2025-11-21 23:04:05,665 | INFO     | sum of square deviations: 1027806172961.6333
[2025-11-22 00:04:43] 2025-11-21 23:04:05,728 | INFO     | sum of deviations: 2693126941082.43
[2025-11-22 00:04:43] 2025-11-21 23:04:05,729 | INFO     | mean x: 1763720290.3380282
[2025-11-22 00:04:43] 2025-11-21 23:04:05,729 | INFO     | mean y: 2887822.509054326
[2025-11-22 00:04:43] 2025-11-21 23:04:05,729 | INFO     | intersect: -4618530841.241643
[2025-11-22 00:04:43] 2025-11-21 23:04:05,730 | INFO     | chi2: 7.858698136340582
[2025-11-22 00:04:43] 2025-11-21 23:04:05,731 | INFO     | current memory leak: 2.62 B/s (using 1491 data points, chi2=7.86)
[2025-11-22 00:04:43] 2025-11-21 23:04:05,734 | INFO     | could have reported an average CPU frequency of 1999 MHz (51 samples)
[2025-11-22 00:04:43] 2025-11-21 23:04:05,735 | INFO     | ..............................
[2025-11-22 00:04:43] 2025-11-21 23:04:05,735 | INFO     | . Timing measurements:
[2025-11-22 00:04:43] 2025-11-21 23:04:05,735 | INFO     | . get job = 0 s
[2025-11-22 00:04:43] 2025-11-21 23:04:05,735 | INFO     | . initial setup = 2 s
[2025-11-22 00:04:43] 2025-11-21 23:04:05,735 | INFO     | . payload setup = 14 s
[2025-11-22 00:04:43] 2025-11-21 23:04:05,735 | INFO     | . stage-in = 0 s
[2025-11-22 00:04:43] 2025-11-21 23:04:05,735 | INFO     | . payload execution = 91924 s
[2025-11-22 00:04:43] 2025-11-21 23:04:05,735 | INFO     | . stage-out = 6 s
[2025-11-22 00:04:43] 2025-11-21 23:04:05,735 | INFO     | . log creation = 2 s
[2025-11-22 00:04:43] 2025-11-21 23:04:05,735 | INFO     | ..............................
[2025-11-22 00:04:43] 2025-11-21 23:04:05,773 | INFO     | time since job start (92066s) is within the limit (172800.0s)
[2025-11-22 00:04:43] 2025-11-21 23:04:05,872 | INFO     | 
[2025-11-22 00:04:43] 2025-11-21 23:04:05,872 | INFO     | job summary report
[2025-11-22 00:04:43] 2025-11-21 23:04:05,872 | INFO     | --------------------------------------------------
[2025-11-22 00:04:43] 2025-11-21 23:04:05,873 | INFO     | PanDA job id: 6891558452
[2025-11-22 00:04:43] 2025-11-21 23:04:05,873 | INFO     | task id: 47493068
[2025-11-22 00:04:43] 2025-11-21 23:04:05,873 | INFO     | errors: (none)
[2025-11-22 00:04:43] 2025-11-21 23:04:05,873 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-22 00:04:43] 2025-11-21 23:04:05,873 | INFO     | pilot state: finished 
[2025-11-22 00:04:43] 2025-11-21 23:04:05,873 | INFO     | transexitcode: 0
[2025-11-22 00:04:43] 2025-11-21 23:04:05,873 | INFO     | exeerrorcode: 0
[2025-11-22 00:04:43] 2025-11-21 23:04:05,873 | INFO     | exeerrordiag: 
[2025-11-22 00:04:43] 2025-11-21 23:04:05,873 | INFO     | exitcode: 0
[2025-11-22 00:04:43] 2025-11-21 23:04:05,873 | INFO     | exitmsg: OK
[2025-11-22 00:04:43] 2025-11-21 23:04:05,874 | INFO     | cpuconsumptiontime: 343867 s
[2025-11-22 00:04:43] 2025-11-21 23:04:05,874 | INFO     | nevents: 1000
[2025-11-22 00:04:43] 2025-11-21 23:04:05,874 | INFO     | neventsw: 0
[2025-11-22 00:04:43] 2025-11-21 23:04:05,874 | INFO     | pid: 9240
[2025-11-22 00:04:43] 2025-11-21 23:04:05,874 | INFO     | pgrp: 9240
[2025-11-22 00:04:43] 2025-11-21 23:04:05,874 | INFO     | corecount: 8
[2025-11-22 00:04:43] 2025-11-21 23:04:05,874 | INFO     | event service: False
[2025-11-22 00:04:43] 2025-11-21 23:04:05,874 | INFO     | sizes: {0: 2298621, 1: 2298820, 10: 2299082, 12: 2299110, 91940: 2362008, 91947: 2371002, 91949: 2371186, 92045: 2371432}
[2025-11-22 00:04:43] 2025-11-21 23:04:05,874 | INFO     | --------------------------------------------------
[2025-11-22 00:04:43] 2025-11-21 23:04:05,874 | INFO     | 
[2025-11-22 00:04:43] 2025-11-21 23:04:05,874 | INFO     | executing command: ls -lF /var/lib/boinc/slots/0
[2025-11-22 00:04:43] 2025-11-21 23:04:06,352 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-22 00:04:43] 2025-11-21 23:04:06,353 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-22 00:04:43] 2025-11-21 23:04:06,353 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-22 00:04:43] 2025-11-21 23:04:06,353 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-22 00:04:43] 2025-11-21 23:04:06,353 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-22 00:04:43] 2025-11-21 23:04:06,353 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-22 00:04:43] 2025-11-21 23:04:06,353 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-22 00:04:43] 2025-11-21 23:04:06,353 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-22 00:04:43] 2025-11-21 23:04:06,353 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-22 00:04:43] 2025-11-21 23:04:06,353 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-22 00:04:43] 2025-11-21 23:04:06,353 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-22 00:04:43] 2025-11-21 23:04:06,353 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-22 00:04:43] 2025-11-21 23:04:06,354 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-22 00:04:43] 2025-11-21 23:04:06,354 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-22 00:04:43] 2025-11-21 23:04:06,354 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-22 00:04:43] 2025-11-21 23:04:06,354 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-22 00:04:43] 2025-11-21 23:04:06,354 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-22 00:04:43] 2025-11-21 23:04:06,354 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-22 00:04:43] 2025-11-21 23:04:06,354 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-22 00:04:43] 2025-11-21 23:04:06,354 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-22 00:04:43] 2025-11-21 23:04:06,354 | INFO     | job 6891558452 has completed (purged errors)
[2025-11-22 00:04:43] 2025-11-21 23:04:06,355 | INFO     | overall cleanup function is called
[2025-11-22 00:04:43] 2025-11-21 23:04:07,375 | INFO     | --- collectZombieJob: --- 10, [9240]
[2025-11-22 00:04:43] 2025-11-21 23:04:07,376 | INFO     | zombie collector waiting for pid 9240
[2025-11-22 00:04:43] 2025-11-21 23:04:07,376 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-22 00:04:43] 2025-11-21 23:04:07,376 | INFO     | collected zombie processes
[2025-11-22 00:04:43] 2025-11-21 23:04:07,376 | INFO     | will attempt to kill all subprocesses of pid=9240
[2025-11-22 00:04:43] 2025-11-21 23:04:07,486 | INFO     | process IDs to be killed: [9240] (in reverse order)
[2025-11-22 00:04:43] 2025-11-21 23:04:08,603 | WARNING  | found no corresponding commands to process id(s)
[2025-11-22 00:04:43] 2025-11-21 23:04:08,603 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-22 00:04:43] 2025-11-21 23:04:08,606 | INFO     | did not find any defunct processes belonging to 9240
[2025-11-22 00:04:43] 2025-11-21 23:04:08,611 | INFO     | did not find any defunct processes belonging to 9240
[2025-11-22 00:04:43] 2025-11-21 23:04:08,639 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-22 00:04:43] 2025-11-21 23:04:08,639 | INFO     | ready for new job
[2025-11-22 00:04:43] 2025-11-21 23:04:08,639 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-22 00:04:43] 2025-11-21 23:04:08,646 | INFO     | ***************************************
[2025-11-22 00:04:43] 2025-11-21 23:04:08,647 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-22 00:04:43] 2025-11-21 23:04:08,647 | INFO     | ***************************************
[2025-11-22 00:04:43] 2025-11-21 23:04:08,647 | INFO     | 
[2025-11-22 00:04:43] 2025-11-21 23:04:08,648 | INFO     | pilot is running in a VM
[2025-11-22 00:04:43] 2025-11-21 23:04:08,648 | INFO     | architecture information:
[2025-11-22 00:04:43] 2025-11-21 23:04:08,652 | INFO     | executing command: cat /etc/os-release
[2025-11-22 00:04:43] 2025-11-21 23:04:08,851 | INFO     | cat /etc/os-release:
[2025-11-22 00:04:43] NAME="CentOS Linux"
[2025-11-22 00:04:43] VERSION="7 (Core)"
[2025-11-22 00:04:43] ID="centos"
[2025-11-22 00:04:43] ID_LIKE="rhel fedora"
[2025-11-22 00:04:43] VERSION_ID="7"
[2025-11-22 00:04:43] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-22 00:04:43] ANSI_COLOR="0;31"
[2025-11-22 00:04:43] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-22 00:04:43] HOME_URL="https://www.centos.org/"
[2025-11-22 00:04:43] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-22 00:04:43] 
[2025-11-22 00:04:43] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-22 00:04:43] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-22 00:04:43] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-22 00:04:43] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-22 00:04:43] 
[2025-11-22 00:04:43] 2025-11-21 23:04:08,852 | INFO     | ***************************************
[2025-11-22 00:04:43] 2025-11-21 23:04:09,356 | INFO     | executing command: df -mP /var/lib/boinc/slots/0
[2025-11-22 00:04:43] 2025-11-21 23:04:09,612 | INFO     | sufficient remaining disk space (494994980864 B)
[2025-11-22 00:04:43] 2025-11-21 23:04:09,613 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-22 00:04:43] 2025-11-21 23:04:09,613 | INFO     | current server update state: UPDATING_FINAL
[2025-11-22 00:04:43] 2025-11-21 23:04:09,613 | INFO     | update_server=False
[2025-11-22 00:04:43] 2025-11-21 23:04:09,613 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-22 00:04:43] 2025-11-21 23:04:09,613 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-22 00:04:43] 2025-11-21 23:04:09,619 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-22 00:04:43] 2025-11-21 23:04:09,620 | INFO     | aborting loop
[2025-11-22 00:04:43] 2025-11-21 23:04:10,619 | INFO     | [job] retrieve thread has finished
[2025-11-22 00:04:43] 2025-11-21 23:04:10,626 | INFO     | [job] job monitor thread has finished
[2025-11-22 00:04:43] 2025-11-21 23:04:10,633 | INFO     | [payload] execute_payloads thread has finished
[2025-11-22 00:04:43] 2025-11-21 23:04:10,636 | INFO     | all payload control threads have been joined
[2025-11-22 00:04:43] 2025-11-21 23:04:10,637 | INFO     | all data control threads have been joined
[2025-11-22 00:04:43] 2025-11-21 23:04:10,655 | INFO     | [job] create_data_payload thread has finished
[2025-11-22 00:04:43] 2025-11-21 23:04:10,666 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-22 00:04:43] 2025-11-21 23:04:10,761 | INFO     | all job control threads have been joined
[2025-11-22 00:04:43] 2025-11-21 23:04:10,886 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-22 00:04:43] 2025-11-21 23:04:10,907 | INFO     | [payload] validate_pre thread has finished
[2025-11-22 00:04:43] 2025-11-21 23:04:11,304 | INFO     | [job] validate thread has finished
[2025-11-22 00:04:43] 2025-11-21 23:04:11,565 | INFO     | [payload] validate_post thread has finished
[2025-11-22 00:04:43] 2025-11-21 23:04:11,620 | INFO     | [data] copytool_out thread has finished
[2025-11-22 00:04:43] 2025-11-21 23:04:11,642 | INFO     | [payload] control thread has finished
[2025-11-22 00:04:43] 2025-11-21 23:04:11,645 | INFO     | [data] control thread has finished
[2025-11-22 00:04:43] 2025-11-21 23:04:11,736 | INFO     | [data] copytool_in thread has finished
[2025-11-22 00:04:43] 2025-11-21 23:04:11,767 | INFO     | [job] control thread has finished
[2025-11-22 00:04:43] 2025-11-21 23:04:11,892 | INFO     | [job] queue monitor thread has finished
[2025-11-22 00:04:43] 2025-11-21 23:04:12,213 | INFO     | [payload] failed_post thread has finished
[2025-11-22 00:04:43] 2025-11-21 23:04:14,683 | INFO     | [data] queue_monitor thread has finished
[2025-11-22 00:04:43] 2025-11-21 23:04:19,926 | INFO     | job.realtimelogging is not enabled
[2025-11-22 00:04:43] 2025-11-21 23:04:20,932 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-22 00:04:43] 2025-11-21 23:04:20,936 | INFO     | [monitor] cgroup control has ended
[2025-11-22 00:04:43] 2025-11-21 23:04:21,067 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140110795089728)>', '<ExcThread(monitor, started 140110568085248)>']
[2025-11-22 00:04:43] 2025-11-21 23:04:26,093 | INFO     | all workflow threads have been joined
[2025-11-22 00:04:43] 2025-11-21 23:04:26,094 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-22 00:04:43] 2025-11-21 23:04:26,094 | INFO     | traces error code: 0
[2025-11-22 00:04:43] 2025-11-21 23:04:26,094 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-22 00:04:43] 2025-11-21 23:04:38,963 | INFO     | PID=2669 has CPU usage=1.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-11-22 00:04:43] 2025-11-21 23:04:38,964 | INFO     | .. there are 9 such processes running
[2025-11-22 00:04:43] 2025-11-21 23:04:38,966 | INFO     | found 0 job(s) in 20 queues
[2025-11-22 00:04:43] 2025-11-21 23:04:38,966 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-22 00:04:43] 2025-11-21 23:04:38,966 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-22 00:04:43] 2025-11-21 23:04:38,966 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-22 00:04:43] 2025-11-21 23:04:38,966 | INFO     | [monitor] control thread has ended
[2025-11-22 00:04:43] 2025-11-21 23:04:39,448 [wrapper] ==== pilot stdout END ====
[2025-11-22 00:04:43] 2025-11-21 23:04:39,526 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-22 00:04:43] 2025-11-21 23:04:39,582 [wrapper] pilotpid: 2669
[2025-11-22 00:04:43] 2025-11-21 23:04:39,633 [wrapper] Pilot exit status: 0
[2025-11-22 00:04:43] 2025-11-21 23:04:40,048 [wrapper] pandaids: 6891558452
[2025-11-22 00:04:43] 2025-11-21 23:04:40,566 [wrapper] cleanup supervisor_pilot 14175 2670
[2025-11-22 00:04:43] 2025-11-21 23:04:40,680 [wrapper] Test setup, not cleaning
[2025-11-22 00:04:43] 2025-11-21 23:04:40,788 [wrapper] apfmon messages muted
[2025-11-22 00:04:43] 2025-11-21 23:04:40,897 [wrapper] ==== wrapper stdout END ====
[2025-11-22 00:04:43] 2025-11-21 23:04:41,022 [wrapper] ==== wrapper stderr END ====
[2025-11-22 00:04:43]  *** Error codes and diagnostics ***
[2025-11-22 00:04:43]     "exeErrorCode": 0,
[2025-11-22 00:04:43]     "exeErrorDiag": "",
[2025-11-22 00:04:43]     "pilotErrorCode": 0,
[2025-11-22 00:04:43]     "pilotErrorDiag": "",
[2025-11-22 00:04:43]  *** Listing of results directory ***
[2025-11-22 00:04:43] total 1336296
[2025-11-22 00:04:43] -rw-r--r--. 1 boinc boinc    576529 Nov 18 16:15 pilot3.tar.gz
[2025-11-22 00:04:43] -rwx------. 1 boinc boinc     36292 Nov 18 16:24 runpilot2-wrapper.sh
[2025-11-22 00:04:43] -rw-r--r--. 1 boinc boinc      5112 Nov 18 16:24 queuedata.json
[2025-11-22 00:04:43] -rw-r--r--. 1 boinc boinc       100 Nov 20 22:29 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-22 00:04:43] -rwxr-xr-x. 1 boinc boinc      7986 Nov 20 22:29 run_atlas
[2025-11-22 00:04:43] -rw-r--r--. 1 boinc boinc       105 Nov 20 22:29 job.xml
[2025-11-22 00:04:43] -rw-r--r--. 1 boinc boinc      6389 Nov 20 22:29 init_data.xml
[2025-11-22 00:04:43] -rw-r--r--. 2 boinc boinc 411443125 Nov 20 22:29 EVNT.47493065._000061.pool.root.1
[2025-11-22 00:04:43] -rw-r--r--. 2 boinc boinc     15120 Nov 20 22:29 start_atlas.sh
[2025-11-22 00:04:43] drwxrwx--x. 2 boinc boinc        68 Nov 20 22:29 shared
[2025-11-22 00:04:43] -rw-r--r--. 2 boinc boinc    590094 Nov 20 22:29 input.tar.gz
[2025-11-22 00:04:43] -rw-r--r--. 1 boinc boinc         0 Nov 20 22:29 boinc_lockfile
[2025-11-22 00:04:43] -rw-r--r--. 1 boinc boinc      2771 Nov 20 22:29 pandaJob.out
[2025-11-22 00:04:43] -rw-------. 1 boinc boinc    989440 Nov 20 22:29 agis_schedconf.cvmfs.json
[2025-11-22 00:04:43] drwx------. 5 boinc boinc      4096 Nov 20 22:29 pilot3
[2025-11-22 00:04:43] -rw-r--r--. 1 boinc boinc       533 Nov 21 23:40 boinc_task_state.xml
[2025-11-22 00:04:43] -rw-------. 1 boinc boinc 923427163 Nov 22 00:00 HITS.47493068._000608.pool.root.1
[2025-11-22 00:04:43] -rw-------. 1 boinc boinc      1047 Nov 22 00:02 memory_monitor_summary.json
[2025-11-22 00:04:43] -rw-------. 1 boinc boinc   1526164 Nov 22 00:02 agis_ddmendpoints.agis.ALL.json
[2025-11-22 00:04:43] -rw-------. 1 boinc boinc   2562279 Nov 22 00:02 log.47493068._000608.job.log.tgz.1
[2025-11-22 00:04:43] -rw-------. 1 boinc boinc        95 Nov 22 00:03 pilot_heartbeat.json
[2025-11-22 00:04:43] -rw-------. 1 boinc boinc      7954 Nov 22 00:04 heartbeat.json
[2025-11-22 00:04:43] -rw-r--r--. 1 boinc boinc        29 Nov 22 00:04 wrapper_checkpoint.txt
[2025-11-22 00:04:43] -rw-r--r--. 1 boinc boinc      8192 Nov 22 00:04 boinc_mmap_file
[2025-11-22 00:04:43] -rw-------. 1 boinc boinc       819 Nov 22 00:04 pilotlog.txt
[2025-11-22 00:04:43] -rw-------. 1 boinc boinc  12237603 Nov 22 00:04 log.47493068._000608.job.log.1
[2025-11-22 00:04:43] -rw-------. 1 boinc boinc       353 Nov 22 00:04 output.list
[2025-11-22 00:04:43] -rw-r--r--. 1 boinc boinc       620 Nov 22 00:04 runtime_log
[2025-11-22 00:04:43] -rw-------. 1 boinc boinc  14817280 Nov 22 00:04 result.tar.gz
[2025-11-22 00:04:43] -rw-r--r--. 1 boinc boinc      8703 Nov 22 00:04 runtime_log.err
[2025-11-22 00:04:43] -rw-------. 1 boinc boinc       662 Nov 22 00:04 lFbLDmckcf8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmSMFKDmAJagtn.diag
[2025-11-22 00:04:43] -rw-r--r--. 1 boinc boinc     21349 Nov 22 00:04 stderr.txt
[2025-11-22 00:04:43] HITS file was successfully produced:
[2025-11-22 00:04:43] -rw-------. 1 boinc boinc 923427163 Nov 22 00:00 shared/HITS.pool.root.1
[2025-11-22 00:04:43]  *** Contents of shared directory: ***
[2025-11-22 00:04:43] total 1318656
[2025-11-22 00:04:43] -rw-r--r--. 2 boinc boinc 411443125 Nov 20 22:29 ATLAS.root_0
[2025-11-22 00:04:43] -rw-r--r--. 2 boinc boinc     15120 Nov 20 22:29 start_atlas.sh
[2025-11-22 00:04:43] -rw-r--r--. 2 boinc boinc    590094 Nov 20 22:29 input.tar.gz
[2025-11-22 00:04:43] -rw-------. 1 boinc boinc 923427163 Nov 22 00:00 HITS.pool.root.1
[2025-11-22 00:04:43] -rw-------. 1 boinc boinc  14817280 Nov 22 00:04 result.tar.gz
00:04:45 (31299): run_atlas exited; CPU time 344375.555835
00:04:45 (31299): called boinc_finish(0)

</stderr_txt>
]]>

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