Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
20:51:29 (17645): wrapper (7.7.26015): starting
20:51:29 (17645): wrapper: running run_atlas (--nthreads 8)
[2025-11-19 20:51:29] Arguments: --nthreads 8
[2025-11-19 20:51:29] Threads: 8
[2025-11-19 20:51:29] Checking for CVMFS
[2025-11-19 20:51:30] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-19 20:51:31] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-19 20:51:31] Running cvmfs_config stat atlas.cern.ch
[2025-11-19 20:51:32] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-19 20:51:32] 2.11.2.0 26867 275571 143696 153055 1 307 12942532 25165825 4168 130560 2 131701399 99.876 73441838 2940 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-11-19 20:51:32] CVMFS is ok
[2025-11-19 20:51:32] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-19 20:51:32] Checking for apptainer binary...
[2025-11-19 20:51:32] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-19 20:51:32] Running /usr/bin/apptainer --version
[2025-11-19 20:51:32] apptainer version 1.3.2-1.el7
[2025-11-19 20:51:32] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-19 20:51:37] cg-vwn435.simple-grid.lan
[2025-11-19 20:51:37] apptainer works
[2025-11-19 20:51:37] Set ATHENA_PROC_NUMBER=8
[2025-11-19 20:51:37] Set ATHENA_CORE_NUMBER=8
[2025-11-19 20:51:37] Starting ATLAS job with PandaID=6891559103
[2025-11-19 20:51:37] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-20 22:28:55]  *** The last 200 lines of the pilot log: ***
[2025-11-20 22:28:55] 2025-11-20 21:28:07,155 | INFO     | time since job start (91982s) is within the limit (172800.0s)
[2025-11-20 22:28:55] 2025-11-20 21:28:07,156 | INFO     | 91992s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-11-20 22:28:55] 2025-11-20 21:28:07,464 | INFO     | monitor loop #6178: job 0:6891559103 is in state 'finished'
[2025-11-20 22:28:55] 2025-11-20 21:28:07,465 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-20 22:28:55] 2025-11-20 21:28:09,175 | INFO     | time since job start (91984s) is within the limit (172800.0s)
[2025-11-20 22:28:55] 2025-11-20 21:28:09,972 | INFO     | monitor loop #6179: job 0:6891559103 is in state 'finished'
[2025-11-20 22:28:55] 2025-11-20 21:28:09,973 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-20 22:28:55] 2025-11-20 21:28:11,182 | INFO     | time since job start (91986s) is within the limit (172800.0s)
[2025-11-20 22:28:55] 2025-11-20 21:28:12,480 | INFO     | monitor loop #6180: job 0:6891559103 is in state 'finished'
[2025-11-20 22:28:55] 2025-11-20 21:28:12,481 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-20 22:28:55] 2025-11-20 21:28:13,188 | INFO     | time since job start (91988s) is within the limit (172800.0s)
[2025-11-20 22:28:55] 2025-11-20 21:28:14,987 | INFO     | monitor loop #6181: job 0:6891559103 is in state 'finished'
[2025-11-20 22:28:55] 2025-11-20 21:28:14,988 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-20 22:28:55] 2025-11-20 21:28:15,196 | INFO     | time since job start (91990s) is within the limit (172800.0s)
[2025-11-20 22:28:55] 2025-11-20 21:28:15,592 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-20 22:28:55] 2025-11-20 21:28:15,593 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2025-11-20 22:28:55] 2025-11-20 21:28:15,595 | INFO     | using path: /var/lib/boinc/slots/0/PanDA_Pilot-6891559103/memory_monitor_summary.json (trf name=prmon)
[2025-11-20 22:28:55] 2025-11-20 21:28:15,596 | INFO     | extracted standard info from prmon json
[2025-11-20 22:28:55] 2025-11-20 21:28:15,596 | INFO     | extracted standard memory fields from prmon json
[2025-11-20 22:28:55] 2025-11-20 21:28:15,596 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-20 22:28:55] 2025-11-20 21:28:15,626 | INFO     | fitting pss+swap vs Time
[2025-11-20 22:28:55] 2025-11-20 21:28:15,629 | INFO     | sum of square deviations: 1044440896683.0151
[2025-11-20 22:28:55] 2025-11-20 21:28:15,721 | INFO     | sum of deviations: 2713357778081.29
[2025-11-20 22:28:55] 2025-11-20 21:28:15,734 | INFO     | mean x: 1763628272.3215477
[2025-11-20 22:28:55] 2025-11-20 21:28:15,734 | INFO     | mean y: 2863916.2048032023
[2025-11-20 22:28:55] 2025-11-20 21:28:15,734 | INFO     | intersect: -4578874031.385428
[2025-11-20 22:28:55] 2025-11-20 21:28:15,736 | INFO     | chi2: 15.751978475648336
[2025-11-20 22:28:55] 2025-11-20 21:28:15,747 | INFO     | sum of square deviations: 1034024961386.752
[2025-11-20 22:28:55] 2025-11-20 21:28:15,816 | INFO     | sum of deviations: 3204213675519.466
[2025-11-20 22:28:55] 2025-11-20 21:28:15,825 | INFO     | mean x: 1763628119.8259706
[2025-11-20 22:28:55] 2025-11-20 21:28:15,825 | INFO     | mean y: 2871101.6941097723
[2025-11-20 22:28:55] 2025-11-20 21:28:15,825 | INFO     | intersect: -5462220700.827109
[2025-11-20 22:28:55] 2025-11-20 21:28:15,827 | INFO     | chi2: 12.607833591651637
[2025-11-20 22:28:55] 2025-11-20 21:28:15,827 | INFO     | current chi2=12.607833591651637 (change=19.960317295109107 %)
[2025-11-20 22:28:55] 2025-11-20 21:28:15,827 | INFO     | right removable region: 1493
[2025-11-20 22:28:55] 2025-11-20 21:28:15,829 | INFO     | sum of square deviations: 1034023752976.7516
[2025-11-20 22:28:55] 2025-11-20 21:28:15,894 | INFO     | sum of deviations: 2261991001410.6226
[2025-11-20 22:28:55] 2025-11-20 21:28:15,895 | INFO     | mean x: 1763628424.8259706
[2025-11-20 22:28:55] 2025-11-20 21:28:15,895 | INFO     | mean y: 2870521.0870147254
[2025-11-20 22:28:55] 2025-11-20 21:28:15,895 | INFO     | intersect: -3855175887.7153854
[2025-11-20 22:28:55] 2025-11-20 21:28:15,897 | INFO     | chi2: 13.377645312337627
[2025-11-20 22:28:55] 2025-11-20 21:28:15,897 | INFO     | current chi2=13.377645312337627 (change=15.073237733160273 %)
[2025-11-20 22:28:55] 2025-11-20 21:28:15,897 | INFO     | left removable region: 10
[2025-11-20 22:28:55] 2025-11-20 21:28:15,899 | INFO     | sum of square deviations: 1011352398384.4375
[2025-11-20 22:28:55] 2025-11-20 21:28:15,974 | INFO     | sum of deviations: 2757388875296.642
[2025-11-20 22:28:55] 2025-11-20 21:28:15,975 | INFO     | mean x: 1763628394.3310857
[2025-11-20 22:28:55] 2025-11-20 21:28:15,975 | INFO     | mean y: 2880869.291975725
[2025-11-20 22:28:55] 2025-11-20 21:28:15,975 | INFO     | intersect: -4805541321.088075
[2025-11-20 22:28:55] 2025-11-20 21:28:15,977 | INFO     | chi2: 9.431232707276182
[2025-11-20 22:28:55] 2025-11-20 21:28:15,977 | INFO     | current memory leak: 2.73 B/s (using 1483 data points, chi2=9.43)
[2025-11-20 22:28:55] 2025-11-20 21:28:15,979 | INFO     | could have reported an average CPU frequency of 1999 MHz (51 samples)
[2025-11-20 22:28:55] 2025-11-20 21:28:15,980 | INFO     | ..............................
[2025-11-20 22:28:55] 2025-11-20 21:28:15,980 | INFO     | . Timing measurements:
[2025-11-20 22:28:55] 2025-11-20 21:28:15,980 | INFO     | . get job = 0 s
[2025-11-20 22:28:55] 2025-11-20 21:28:15,980 | INFO     | . initial setup = 10 s
[2025-11-20 22:28:55] 2025-11-20 21:28:15,980 | INFO     | . payload setup = 140 s
[2025-11-20 22:28:55] 2025-11-20 21:28:15,981 | INFO     | . stage-in = 0 s
[2025-11-20 22:28:55] 2025-11-20 21:28:15,981 | INFO     | . payload execution = 91544 s
[2025-11-20 22:28:55] 2025-11-20 21:28:15,981 | INFO     | . stage-out = 6 s
[2025-11-20 22:28:55] 2025-11-20 21:28:15,981 | INFO     | . log creation = 2 s
[2025-11-20 22:28:55] 2025-11-20 21:28:15,981 | INFO     | ..............................
[2025-11-20 22:28:55] 2025-11-20 21:28:16,457 | INFO     | 
[2025-11-20 22:28:55] 2025-11-20 21:28:16,458 | INFO     | job summary report
[2025-11-20 22:28:55] 2025-11-20 21:28:16,458 | INFO     | --------------------------------------------------
[2025-11-20 22:28:55] 2025-11-20 21:28:16,458 | INFO     | PanDA job id: 6891559103
[2025-11-20 22:28:55] 2025-11-20 21:28:16,458 | INFO     | task id: 47493068
[2025-11-20 22:28:55] 2025-11-20 21:28:16,458 | INFO     | errors: (none)
[2025-11-20 22:28:55] 2025-11-20 21:28:16,458 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-20 22:28:55] 2025-11-20 21:28:16,458 | INFO     | pilot state: finished 
[2025-11-20 22:28:55] 2025-11-20 21:28:16,458 | INFO     | transexitcode: 0
[2025-11-20 22:28:55] 2025-11-20 21:28:16,458 | INFO     | exeerrorcode: 0
[2025-11-20 22:28:55] 2025-11-20 21:28:16,459 | INFO     | exeerrordiag: 
[2025-11-20 22:28:55] 2025-11-20 21:28:16,459 | INFO     | exitcode: 0
[2025-11-20 22:28:55] 2025-11-20 21:28:16,459 | INFO     | exitmsg: OK
[2025-11-20 22:28:55] 2025-11-20 21:28:16,459 | INFO     | cpuconsumptiontime: 341785 s
[2025-11-20 22:28:55] 2025-11-20 21:28:16,459 | INFO     | nevents: 1000
[2025-11-20 22:28:55] 2025-11-20 21:28:16,459 | INFO     | neventsw: 0
[2025-11-20 22:28:55] 2025-11-20 21:28:16,459 | INFO     | pid: 28026
[2025-11-20 22:28:55] 2025-11-20 21:28:16,459 | INFO     | pgrp: 28026
[2025-11-20 22:28:55] 2025-11-20 21:28:16,459 | INFO     | corecount: 8
[2025-11-20 22:28:55] 2025-11-20 21:28:16,459 | INFO     | event service: False
[2025-11-20 22:28:55] 2025-11-20 21:28:16,459 | INFO     | sizes: {0: 2296368, 1: 2297053, 2: 2297252, 13: 2297252, 24: 2297308, 35: 2297336, 45: 2297492, 56: 2297520, 67: 2297548, 78: 2297576, 88: 2297632, 99: 2297940, 10
[2025-11-20 22:28:55] 2025-11-20 21:28:16,460 | INFO     | --------------------------------------------------
[2025-11-20 22:28:55] 2025-11-20 21:28:16,460 | INFO     | 
[2025-11-20 22:28:55] 2025-11-20 21:28:16,460 | INFO     | executing command: ls -lF /var/lib/boinc/slots/0
[2025-11-20 22:28:55] 2025-11-20 21:28:16,833 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-20 22:28:55] 2025-11-20 21:28:16,833 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-20 22:28:55] 2025-11-20 21:28:16,833 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-20 22:28:55] 2025-11-20 21:28:16,833 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-20 22:28:55] 2025-11-20 21:28:16,834 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-20 22:28:55] 2025-11-20 21:28:16,834 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-20 22:28:55] 2025-11-20 21:28:16,834 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-20 22:28:55] 2025-11-20 21:28:16,834 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-20 22:28:55] 2025-11-20 21:28:16,834 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-20 22:28:55] 2025-11-20 21:28:16,834 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-20 22:28:55] 2025-11-20 21:28:16,834 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-20 22:28:55] 2025-11-20 21:28:16,834 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-20 22:28:55] 2025-11-20 21:28:16,834 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-20 22:28:55] 2025-11-20 21:28:16,834 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-20 22:28:55] 2025-11-20 21:28:16,834 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-20 22:28:55] 2025-11-20 21:28:16,835 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-20 22:28:55] 2025-11-20 21:28:16,835 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-20 22:28:55] 2025-11-20 21:28:16,835 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-20 22:28:55] 2025-11-20 21:28:16,835 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-20 22:28:55] 2025-11-20 21:28:16,835 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-20 22:28:55] 2025-11-20 21:28:16,835 | INFO     | job 6891559103 has completed (purged errors)
[2025-11-20 22:28:55] 2025-11-20 21:28:16,835 | INFO     | overall cleanup function is called
[2025-11-20 22:28:55] 2025-11-20 21:28:17,857 | INFO     | --- collectZombieJob: --- 10, [28026]
[2025-11-20 22:28:55] 2025-11-20 21:28:17,858 | INFO     | zombie collector waiting for pid 28026
[2025-11-20 22:28:55] 2025-11-20 21:28:17,858 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-20 22:28:55] 2025-11-20 21:28:17,858 | INFO     | collected zombie processes
[2025-11-20 22:28:55] 2025-11-20 21:28:17,858 | INFO     | will attempt to kill all subprocesses of pid=28026
[2025-11-20 22:28:55] 2025-11-20 21:28:17,963 | INFO     | process IDs to be killed: [28026] (in reverse order)
[2025-11-20 22:28:55] 2025-11-20 21:28:18,567 | WARNING  | found no corresponding commands to process id(s)
[2025-11-20 22:28:55] 2025-11-20 21:28:18,567 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-20 22:28:55] 2025-11-20 21:28:18,571 | INFO     | did not find any defunct processes belonging to 28026
[2025-11-20 22:28:55] 2025-11-20 21:28:18,580 | INFO     | did not find any defunct processes belonging to 28026
[2025-11-20 22:28:55] 2025-11-20 21:28:18,667 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-20 22:28:55] 2025-11-20 21:28:18,667 | INFO     | ready for new job
[2025-11-20 22:28:55] 2025-11-20 21:28:18,667 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-20 22:28:55] 2025-11-20 21:28:18,674 | INFO     | ***************************************
[2025-11-20 22:28:55] 2025-11-20 21:28:18,674 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-20 22:28:55] 2025-11-20 21:28:18,674 | INFO     | ***************************************
[2025-11-20 22:28:55] 2025-11-20 21:28:18,674 | INFO     | 
[2025-11-20 22:28:55] 2025-11-20 21:28:18,675 | INFO     | pilot is running in a VM
[2025-11-20 22:28:55] 2025-11-20 21:28:18,675 | INFO     | architecture information:
[2025-11-20 22:28:55] 2025-11-20 21:28:18,695 | INFO     | executing command: cat /etc/os-release
[2025-11-20 22:28:55] 2025-11-20 21:28:18,902 | INFO     | cat /etc/os-release:
[2025-11-20 22:28:55] NAME="CentOS Linux"
[2025-11-20 22:28:55] VERSION="7 (Core)"
[2025-11-20 22:28:55] ID="centos"
[2025-11-20 22:28:55] ID_LIKE="rhel fedora"
[2025-11-20 22:28:55] VERSION_ID="7"
[2025-11-20 22:28:55] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-20 22:28:55] ANSI_COLOR="0;31"
[2025-11-20 22:28:55] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-20 22:28:55] HOME_URL="https://www.centos.org/"
[2025-11-20 22:28:55] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-20 22:28:55] 
[2025-11-20 22:28:55] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-20 22:28:55] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-20 22:28:55] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-20 22:28:55] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-20 22:28:55] 
[2025-11-20 22:28:55] 2025-11-20 21:28:18,903 | INFO     | ***************************************
[2025-11-20 22:28:55] 2025-11-20 21:28:19,407 | INFO     | executing command: df -mP /var/lib/boinc/slots/0
[2025-11-20 22:28:55] 2025-11-20 21:28:19,674 | INFO     | sufficient remaining disk space (493306773504 B)
[2025-11-20 22:28:55] 2025-11-20 21:28:19,674 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-20 22:28:55] 2025-11-20 21:28:19,675 | INFO     | current server update state: UPDATING_FINAL
[2025-11-20 22:28:55] 2025-11-20 21:28:19,675 | INFO     | update_server=False
[2025-11-20 22:28:55] 2025-11-20 21:28:19,675 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-20 22:28:55] 2025-11-20 21:28:19,767 | INFO     | all job control threads have been joined
[2025-11-20 22:28:55] 2025-11-20 21:28:20,012 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-20 22:28:55] 2025-11-20 21:28:20,013 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-20 22:28:55] 2025-11-20 21:28:20,013 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-20 22:28:55] 2025-11-20 21:28:20,013 | INFO     | will abort loop
[2025-11-20 22:28:55] 2025-11-20 21:28:20,037 | INFO     | all data control threads have been joined
[2025-11-20 22:28:55] 2025-11-20 21:28:20,680 | INFO     | [job] retrieve thread has finished
[2025-11-20 22:28:55] 2025-11-20 21:28:20,696 | INFO     | [job] create_data_payload thread has finished
[2025-11-20 22:28:55] 2025-11-20 21:28:20,756 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-20 22:28:55] 2025-11-20 21:28:20,774 | INFO     | [job] control thread has finished
[2025-11-20 22:28:55] 2025-11-20 21:28:20,803 | INFO     | [job] validate thread has finished
[2025-11-20 22:28:55] 2025-11-20 21:28:20,965 | INFO     | all payload control threads have been joined
[2025-11-20 22:28:55] 2025-11-20 21:28:21,019 | INFO     | [job] job monitor thread has finished
[2025-11-20 22:28:55] 2025-11-20 21:28:21,044 | INFO     | [data] control thread has finished
[2025-11-20 22:28:55] 2025-11-20 21:28:21,153 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-20 22:28:55] 2025-11-20 21:28:21,163 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-20 22:28:55] 2025-11-20 21:28:21,203 | INFO     | [data] copytool_in thread has finished
[2025-11-20 22:28:55] 2025-11-20 21:28:21,361 | INFO     | [payload] validate_pre thread has finished
[2025-11-20 22:28:55] 2025-11-20 21:28:21,414 | INFO     | [payload] validate_post thread has finished
[2025-11-20 22:28:55] 2025-11-20 21:28:21,725 | INFO     | [payload] execute_payloads thread has finished
[2025-11-20 22:28:55] 2025-11-20 21:28:21,728 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-20 22:28:55] 2025-11-20 21:28:21,968 | INFO     | [payload] failed_post thread has finished
[2025-11-20 22:28:55] 2025-11-20 21:28:21,971 | INFO     | [payload] control thread has finished
[2025-11-20 22:28:55] 2025-11-20 21:28:22,159 | INFO     | [job] queue monitor thread has finished
[2025-11-20 22:28:55] 2025-11-20 21:28:22,763 | INFO     | [data] copytool_out thread has finished
[2025-11-20 22:28:55] 2025-11-20 21:28:25,737 | INFO     | [data] queue_monitor thread has finished
[2025-11-20 22:28:55] 2025-11-20 21:28:45,430 | INFO     | [monitor] cgroup control has ended
[2025-11-20 22:28:55] 2025-11-20 21:28:46,510 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139914436147008)>', '<ExcThread(monitor, started 139913710262016)>']
[2025-11-20 22:28:55] 2025-11-20 21:28:48,385 | INFO     | PID=21409 has CPU usage=2.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-20 22:28:55] 2025-11-20 21:28:48,385 | INFO     | .. there are 9 such processes running
[2025-11-20 22:28:55] 2025-11-20 21:28:48,387 | INFO     | found 0 job(s) in 20 queues
[2025-11-20 22:28:55] 2025-11-20 21:28:48,387 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-20 22:28:55] 2025-11-20 21:28:48,387 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-20 22:28:55] 2025-11-20 21:28:48,387 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-20 22:28:55] 2025-11-20 21:28:48,387 | INFO     | [monitor] control thread has ended
[2025-11-20 22:28:55] 2025-11-20 21:28:51,536 | INFO     | all workflow threads have been joined
[2025-11-20 22:28:55] 2025-11-20 21:28:51,537 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-20 22:28:55] 2025-11-20 21:28:51,537 | INFO     | traces error code: 0
[2025-11-20 22:28:55] 2025-11-20 21:28:51,537 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-20 22:28:55] 2025-11-20 21:28:51,840 [wrapper] ==== pilot stdout END ====
[2025-11-20 22:28:55] 2025-11-20 21:28:51,860 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-20 22:28:55] 2025-11-20 21:28:51,966 [wrapper] pilotpid: 21409
[2025-11-20 22:28:55] 2025-11-20 21:28:52,024 [wrapper] Pilot exit status: 0
[2025-11-20 22:28:55] 2025-11-20 21:28:52,295 [wrapper] pandaids: 6891559103
[2025-11-20 22:28:55] 2025-11-20 21:28:52,475 [wrapper] cleanup supervisor_pilot 29156 21410
[2025-11-20 22:28:55] 2025-11-20 21:28:52,532 [wrapper] Test setup, not cleaning
[2025-11-20 22:28:55] 2025-11-20 21:28:52,625 [wrapper] apfmon messages muted
[2025-11-20 22:28:55] 2025-11-20 21:28:52,715 [wrapper] ==== wrapper stdout END ====
[2025-11-20 22:28:55] 2025-11-20 21:28:52,784 [wrapper] ==== wrapper stderr END ====
[2025-11-20 22:28:55]  *** Error codes and diagnostics ***
[2025-11-20 22:28:55]     "exeErrorCode": 0,
[2025-11-20 22:28:55]     "exeErrorDiag": "",
[2025-11-20 22:28:55]     "pilotErrorCode": 0,
[2025-11-20 22:28:55]     "pilotErrorDiag": "",
[2025-11-20 22:28:55]  *** Listing of results directory ***
[2025-11-20 22:28:55] total 1334532
[2025-11-20 22:28:55] -rw-r--r--. 1 boinc boinc    576529 Nov 18 16:15 pilot3.tar.gz
[2025-11-20 22:28:55] -rwx------. 1 boinc boinc     36292 Nov 18 16:24 runpilot2-wrapper.sh
[2025-11-20 22:28:55] -rw-r--r--. 1 boinc boinc      5112 Nov 18 16:24 queuedata.json
[2025-11-20 22:28:55] -rw-r--r--. 1 boinc boinc       100 Nov 19 20:51 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-20 22:28:55] -rwxr-xr-x. 1 boinc boinc      7986 Nov 19 20:51 run_atlas
[2025-11-20 22:28:55] -rw-r--r--. 1 boinc boinc       105 Nov 19 20:51 job.xml
[2025-11-20 22:28:55] -rw-r--r--. 1 boinc boinc      6388 Nov 19 20:51 init_data.xml
[2025-11-20 22:28:55] -rw-r--r--. 2 boinc boinc 410332526 Nov 19 20:51 EVNT.47493065._000078.pool.root.1
[2025-11-20 22:28:55] -rw-r--r--. 2 boinc boinc     15120 Nov 19 20:51 start_atlas.sh
[2025-11-20 22:28:55] drwxrwx--x. 2 boinc boinc        68 Nov 19 20:51 shared
[2025-11-20 22:28:55] -rw-r--r--. 2 boinc boinc    590100 Nov 19 20:51 input.tar.gz
[2025-11-20 22:28:55] -rw-r--r--. 1 boinc boinc         0 Nov 19 20:51 boinc_lockfile
[2025-11-20 22:28:55] -rw-r--r--. 1 boinc boinc      2771 Nov 19 20:51 pandaJob.out
[2025-11-20 22:28:55] -rw-------. 1 boinc boinc    989451 Nov 19 20:54 agis_schedconf.cvmfs.json
[2025-11-20 22:28:55] drwx------. 5 boinc boinc      4096 Nov 19 20:55 pilot3
[2025-11-20 22:28:55] -rw-r--r--. 1 boinc boinc       533 Nov 20 22:01 boinc_task_state.xml
[2025-11-20 22:28:55] -rw-------. 1 boinc boinc 922822562 Nov 20 22:25 HITS.47493068._000774.pool.root.1
[2025-11-20 22:28:55] -rw-------. 1 boinc boinc      1034 Nov 20 22:26 memory_monitor_summary.json
[2025-11-20 22:28:55] -rw-------. 1 boinc boinc   1526164 Nov 20 22:26 agis_ddmendpoints.agis.ALL.json
[2025-11-20 22:28:55] -rw-------. 1 boinc boinc   2562050 Nov 20 22:26 log.47493068._000774.job.log.tgz.1
[2025-11-20 22:28:55] -rw-------. 1 boinc boinc      8626 Nov 20 22:28 heartbeat.json
[2025-11-20 22:28:55] -rw-------. 1 boinc boinc        95 Nov 20 22:28 pilot_heartbeat.json
[2025-11-20 22:28:55] -rw-r--r--. 1 boinc boinc      8192 Nov 20 22:28 boinc_mmap_file
[2025-11-20 22:28:55] -rw-r--r--. 1 boinc boinc        29 Nov 20 22:28 wrapper_checkpoint.txt
[2025-11-20 22:28:55] -rw-------. 1 boinc boinc      5070 Nov 20 22:28 pilotlog.txt
[2025-11-20 22:28:55] -rw-------. 1 boinc boinc  12187989 Nov 20 22:28 log.47493068._000774.job.log.1
[2025-11-20 22:28:55] -rw-------. 1 boinc boinc       353 Nov 20 22:28 output.list
[2025-11-20 22:28:55] -rw-r--r--. 1 boinc boinc       620 Nov 20 22:28 runtime_log
[2025-11-20 22:28:55] -rw-------. 1 boinc boinc  14766080 Nov 20 22:28 result.tar.gz
[2025-11-20 22:28:55] -rw-------. 1 boinc boinc       662 Nov 20 22:28 tGmMDmUkcf8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmmLFKDmQr0yRm.diag
[2025-11-20 22:28:55] -rw-r--r--. 1 boinc boinc      8703 Nov 20 22:28 runtime_log.err
[2025-11-20 22:28:55] -rw-r--r--. 1 boinc boinc     21437 Nov 20 22:28 stderr.txt
[2025-11-20 22:28:55] HITS file was successfully produced:
[2025-11-20 22:28:55] -rw-------. 1 boinc boinc 922822562 Nov 20 22:25 shared/HITS.pool.root.1
[2025-11-20 22:28:55]  *** Contents of shared directory: ***
[2025-11-20 22:28:55] total 1316928
[2025-11-20 22:28:55] -rw-r--r--. 2 boinc boinc 410332526 Nov 19 20:51 ATLAS.root_0
[2025-11-20 22:28:55] -rw-r--r--. 2 boinc boinc     15120 Nov 19 20:51 start_atlas.sh
[2025-11-20 22:28:55] -rw-r--r--. 2 boinc boinc    590100 Nov 19 20:51 input.tar.gz
[2025-11-20 22:28:55] -rw-------. 1 boinc boinc 922822562 Nov 20 22:25 HITS.pool.root.1
[2025-11-20 22:28:55] -rw-------. 1 boinc boinc  14766080 Nov 20 22:28 result.tar.gz
22:28:56 (17645): run_atlas exited; CPU time 342301.862626
22:28:56 (17645): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN