Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
20:08:27 (20677): wrapper (7.7.26015): starting
20:08:27 (20677): wrapper: running run_atlas (--nthreads 8)
[2025-11-19 20:08:27] Arguments: --nthreads 8
[2025-11-19 20:08:27] Threads: 8
[2025-11-19 20:08:27] Checking for CVMFS
[2025-11-19 20:08:28] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-19 20:08:28] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-19 20:08:28] Running cvmfs_config stat atlas.cern.ch
[2025-11-19 20:08:29] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-19 20:08:29] 2.11.2.0 21973 72908 91088 153053 2 301 22900071 25165825 3651 130560 3 21056773 99.873 13172884 2388 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-11-19 20:08:29] CVMFS is ok
[2025-11-19 20:08:29] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-19 20:08:29] Checking for apptainer binary...
[2025-11-19 20:08:29] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-19 20:08:29] Running /usr/bin/apptainer --version
[2025-11-19 20:08:29] apptainer version 1.3.2-1.el7
[2025-11-19 20:08:29] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-19 20:08:34] cg-vwn333.simple-grid.lan
[2025-11-19 20:08:34] apptainer works
[2025-11-19 20:08:34] Set ATHENA_PROC_NUMBER=8
[2025-11-19 20:08:34] Set ATHENA_CORE_NUMBER=8
[2025-11-19 20:08:34] Starting ATLAS job with PandaID=6891576608
[2025-11-19 20:08:34] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/8 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-20 21:44:06]  *** The last 200 lines of the pilot log: ***
[2025-11-20 21:44:06] 2025-11-20 20:42:54,230 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2025-11-20 21:44:06] 2025-11-20 20:42:54,233 | INFO     | using path: /var/lib/boinc/slots/8/PanDA_Pilot-6891576608/memory_monitor_summary.json (trf name=prmon)
[2025-11-20 21:44:06] 2025-11-20 20:42:54,234 | INFO     | extracted standard info from prmon json
[2025-11-20 21:44:06] 2025-11-20 20:42:54,234 | INFO     | extracted standard memory fields from prmon json
[2025-11-20 21:44:06] 2025-11-20 20:42:54,234 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-20 21:44:06] 2025-11-20 20:42:54,265 | INFO     | fitting pss+swap vs Time
[2025-11-20 21:44:06] 2025-11-20 20:42:54,267 | INFO     | sum of square deviations: 1042352325796.3257
[2025-11-20 21:44:06] 2025-11-20 20:42:54,331 | INFO     | sum of deviations: 4673292796027.061
[2025-11-20 21:44:06] 2025-11-20 20:42:54,331 | INFO     | mean x: 1763625668.6755674
[2025-11-20 21:44:06] 2025-11-20 20:42:54,331 | INFO     | mean y: 2858034.0967957275
[2025-11-20 21:44:06] 2025-11-20 20:42:54,331 | INFO     | intersect: -7904198849.009733
[2025-11-20 21:44:06] 2025-11-20 20:42:54,334 | INFO     | chi2: 13.840309306646803
[2025-11-20 21:44:06] 2025-11-20 20:42:54,336 | INFO     | sum of square deviations: 1031950239941.8997
[2025-11-20 21:44:06] 2025-11-20 20:42:54,399 | INFO     | sum of deviations: 5190088466625.809
[2025-11-20 21:44:06] 2025-11-20 20:42:54,400 | INFO     | mean x: 1763625516.1795044
[2025-11-20 21:44:06] 2025-11-20 20:42:54,400 | INFO     | mean y: 2865610.6275954456
[2025-11-20 21:44:06] 2025-11-20 20:42:54,400 | INFO     | intersect: -8867109022.534544
[2025-11-20 21:44:06] 2025-11-20 20:42:54,402 | INFO     | chi2: 10.51216482815124
[2025-11-20 21:44:06] 2025-11-20 20:42:54,402 | INFO     | current chi2=10.51216482815124 (change=24.04674927963657 %)
[2025-11-20 21:44:06] 2025-11-20 20:42:54,402 | INFO     | right removable region: 1492
[2025-11-20 21:44:06] 2025-11-20 20:42:54,405 | INFO     | sum of square deviations: 1031949165731.8997
[2025-11-20 21:44:06] 2025-11-20 20:42:54,476 | INFO     | sum of deviations: 4034778003726.9546
[2025-11-20 21:44:06] 2025-11-20 20:42:54,477 | INFO     | mean x: 1763625821.1795044
[2025-11-20 21:44:06] 2025-11-20 20:42:54,477 | INFO     | mean y: 2867393.9068988613
[2025-11-20 21:44:06] 2025-11-20 20:42:54,477 | INFO     | intersect: -6892664776.084356
[2025-11-20 21:44:06] 2025-11-20 20:42:54,479 | INFO     | chi2: 9.01447716393125
[2025-11-20 21:44:06] 2025-11-20 20:42:54,479 | INFO     | current chi2=9.01447716393125 (change=34.86795009991539 %)
[2025-11-20 21:44:06] 2025-11-20 20:42:54,482 | INFO     | sum of square deviations: 1021615448829.9132
[2025-11-20 21:44:06] 2025-11-20 20:42:54,543 | INFO     | sum of deviations: 3533513149420.6357
[2025-11-20 21:44:06] 2025-11-20 20:42:54,543 | INFO     | mean x: 1763625973.6834676
[2025-11-20 21:44:06] 2025-11-20 20:42:54,544 | INFO     | mean y: 2874789.6276881723
[2025-11-20 21:44:06] 2025-11-20 20:42:54,544 | INFO     | intersect: -6097067782.509183
[2025-11-20 21:44:06] 2025-11-20 20:42:54,546 | INFO     | chi2: 6.11376024794636
[2025-11-20 21:44:06] 2025-11-20 20:42:54,546 | INFO     | current chi2=6.11376024794636 (change=32.17842658242284 %)
[2025-11-20 21:44:06] 2025-11-20 20:42:54,548 | INFO     | sum of square deviations: 1011351486774.1122
[2025-11-20 21:44:06] 2025-11-20 20:42:54,610 | INFO     | sum of deviations: 3356888129586.4243
[2025-11-20 21:44:06] 2025-11-20 20:42:54,610 | INFO     | mean x: 1763626126.183412
[2025-11-20 21:44:06] 2025-11-20 20:42:54,610 | INFO     | mean y: 2877412.2447741064
[2025-11-20 21:44:06] 2025-11-20 20:42:54,610 | INFO     | intersect: -5850968343.09933
[2025-11-20 21:44:06] 2025-11-20 20:42:54,612 | INFO     | chi2: 5.790270487828896
[2025-11-20 21:44:06] 2025-11-20 20:42:54,612 | INFO     | current chi2=5.790270487828896 (change=5.2911751033437415 %)
[2025-11-20 21:44:06] 2025-11-20 20:42:54,613 | INFO     | left removable region: 30
[2025-11-20 21:44:06] 2025-11-20 20:42:54,615 | INFO     | sum of square deviations: 968994454349.6357
[2025-11-20 21:44:06] 2025-11-20 20:42:54,674 | INFO     | sum of deviations: 3679758203825.6577
[2025-11-20 21:44:06] 2025-11-20 20:42:54,675 | INFO     | mean x: 1763626400.6846786
[2025-11-20 21:44:06] 2025-11-20 20:42:54,675 | INFO     | mean y: 2891540.2530779755
[2025-11-20 21:44:06] 2025-11-20 20:42:54,675 | INFO     | intersect: -6694482925.897707
[2025-11-20 21:44:06] 2025-11-20 20:42:54,677 | INFO     | chi2: 1.4324027410427433
[2025-11-20 21:44:06] 2025-11-20 20:42:54,677 | INFO     | current memory leak: 3.80 B/s (using 1462 data points, chi2=1.43)
[2025-11-20 21:44:06] 2025-11-20 20:42:54,679 | INFO     | could have reported an average CPU frequency of 1999 MHz (51 samples)
[2025-11-20 21:44:06] 2025-11-20 20:42:54,680 | INFO     | ..............................
[2025-11-20 21:44:06] 2025-11-20 20:42:54,680 | INFO     | . Timing measurements:
[2025-11-20 21:44:06] 2025-11-20 20:42:54,680 | INFO     | . get job = 0 s
[2025-11-20 21:44:06] 2025-11-20 20:42:54,680 | INFO     | . initial setup = 5 s
[2025-11-20 21:44:06] 2025-11-20 20:42:54,680 | INFO     | . payload setup = 176 s
[2025-11-20 21:44:06] 2025-11-20 20:42:54,680 | INFO     | . stage-in = 0 s
[2025-11-20 21:44:06] 2025-11-20 20:42:54,680 | INFO     | . payload execution = 91503 s
[2025-11-20 21:44:06] 2025-11-20 20:42:54,680 | INFO     | . stage-out = 4 s
[2025-11-20 21:44:06] 2025-11-20 20:42:54,681 | INFO     | . log creation = 1 s
[2025-11-20 21:44:06] 2025-11-20 20:42:54,681 | INFO     | ..............................
[2025-11-20 21:44:06] 2025-11-20 20:42:54,812 | INFO     | 
[2025-11-20 21:44:06] 2025-11-20 20:42:54,812 | INFO     | job summary report
[2025-11-20 21:44:06] 2025-11-20 20:42:54,813 | INFO     | --------------------------------------------------
[2025-11-20 21:44:06] 2025-11-20 20:42:54,813 | INFO     | PanDA job id: 6891576608
[2025-11-20 21:44:06] 2025-11-20 20:42:54,813 | INFO     | task id: 47493068
[2025-11-20 21:44:06] 2025-11-20 20:42:54,813 | INFO     | errors: (none)
[2025-11-20 21:44:06] 2025-11-20 20:42:54,813 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-20 21:44:06] 2025-11-20 20:42:54,813 | INFO     | pilot state: finished 
[2025-11-20 21:44:06] 2025-11-20 20:42:54,813 | INFO     | transexitcode: 0
[2025-11-20 21:44:06] 2025-11-20 20:42:54,813 | INFO     | exeerrorcode: 0
[2025-11-20 21:44:06] 2025-11-20 20:42:54,813 | INFO     | exeerrordiag: 
[2025-11-20 21:44:06] 2025-11-20 20:42:54,814 | INFO     | exitcode: 0
[2025-11-20 21:44:06] 2025-11-20 20:42:54,814 | INFO     | exitmsg: OK
[2025-11-20 21:44:06] 2025-11-20 20:42:54,814 | INFO     | cpuconsumptiontime: 341321 s
[2025-11-20 21:44:06] 2025-11-20 20:42:54,814 | INFO     | nevents: 1000
[2025-11-20 21:44:06] 2025-11-20 20:42:54,814 | INFO     | neventsw: 0
[2025-11-20 21:44:06] 2025-11-20 20:42:54,814 | INFO     | pid: 31060
[2025-11-20 21:44:06] 2025-11-20 20:42:54,814 | INFO     | pgrp: 31060
[2025-11-20 21:44:06] 2025-11-20 20:42:54,814 | INFO     | corecount: 8
[2025-11-20 21:44:06] 2025-11-20 20:42:54,814 | INFO     | event service: False
[2025-11-20 21:44:06] 2025-11-20 20:42:54,814 | INFO     | sizes: {0: 2296372, 1: 2297057, 2: 2297256, 13: 2297256, 24: 2297312, 35: 2297340, 46: 2297496, 56: 2297524, 67: 2297552, 78: 2297580, 89: 2297636, 99: 2298234, 91
[2025-11-20 21:44:06] 2025-11-20 20:42:54,815 | INFO     | --------------------------------------------------
[2025-11-20 21:44:06] 2025-11-20 20:42:54,815 | INFO     | 
[2025-11-20 21:44:06] 2025-11-20 20:42:54,815 | INFO     | executing command: ls -lF /var/lib/boinc/slots/8
[2025-11-20 21:44:06] 2025-11-20 20:42:55,130 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-20 21:44:06] 2025-11-20 20:42:55,130 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-20 21:44:06] 2025-11-20 20:42:55,130 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-20 21:44:06] 2025-11-20 20:42:55,130 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-20 21:44:06] 2025-11-20 20:42:55,130 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-20 21:44:06] 2025-11-20 20:42:55,130 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-20 21:44:06] 2025-11-20 20:42:55,131 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-20 21:44:06] 2025-11-20 20:42:55,131 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-20 21:44:06] 2025-11-20 20:42:55,131 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-20 21:44:06] 2025-11-20 20:42:55,131 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-20 21:44:06] 2025-11-20 20:42:55,131 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-20 21:44:06] 2025-11-20 20:42:55,131 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-20 21:44:06] 2025-11-20 20:42:55,131 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-20 21:44:06] 2025-11-20 20:42:55,131 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-20 21:44:06] 2025-11-20 20:42:55,131 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-20 21:44:06] 2025-11-20 20:42:55,131 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-20 21:44:06] 2025-11-20 20:42:55,131 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-20 21:44:06] 2025-11-20 20:42:55,132 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-20 21:44:06] 2025-11-20 20:42:55,132 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-20 21:44:06] 2025-11-20 20:42:55,132 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-20 21:44:06] 2025-11-20 20:42:55,132 | INFO     | job 6891576608 has completed (purged errors)
[2025-11-20 21:44:06] 2025-11-20 20:42:55,132 | INFO     | overall cleanup function is called
[2025-11-20 21:44:06] 2025-11-20 20:42:56,149 | INFO     | --- collectZombieJob: --- 10, [31060]
[2025-11-20 21:44:06] 2025-11-20 20:42:56,149 | INFO     | zombie collector waiting for pid 31060
[2025-11-20 21:44:06] 2025-11-20 20:42:56,150 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-20 21:44:06] 2025-11-20 20:42:56,150 | INFO     | collected zombie processes
[2025-11-20 21:44:06] 2025-11-20 20:42:56,150 | INFO     | will attempt to kill all subprocesses of pid=31060
[2025-11-20 21:44:06] 2025-11-20 20:42:56,249 | INFO     | process IDs to be killed: [31060] (in reverse order)
[2025-11-20 21:44:06] 2025-11-20 20:42:56,322 | WARNING  | found no corresponding commands to process id(s)
[2025-11-20 21:44:06] 2025-11-20 20:42:56,322 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-20 21:44:06] 2025-11-20 20:42:56,326 | INFO     | did not find any defunct processes belonging to 31060
[2025-11-20 21:44:06] 2025-11-20 20:42:56,329 | INFO     | did not find any defunct processes belonging to 31060
[2025-11-20 21:44:06] 2025-11-20 20:42:56,331 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-20 21:44:06] 2025-11-20 20:42:56,331 | INFO     | ready for new job
[2025-11-20 21:44:06] 2025-11-20 20:42:56,332 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-20 21:44:06] 2025-11-20 20:42:56,338 | INFO     | ***************************************
[2025-11-20 21:44:06] 2025-11-20 20:42:56,338 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-20 21:44:06] 2025-11-20 20:42:56,339 | INFO     | ***************************************
[2025-11-20 21:44:06] 2025-11-20 20:42:56,339 | INFO     | 
[2025-11-20 21:44:06] 2025-11-20 20:42:56,339 | INFO     | pilot is running in a VM
[2025-11-20 21:44:06] 2025-11-20 20:42:56,339 | INFO     | architecture information:
[2025-11-20 21:44:06] 2025-11-20 20:42:56,340 | INFO     | executing command: cat /etc/os-release
[2025-11-20 21:44:06] 2025-11-20 20:42:56,397 | INFO     | cat /etc/os-release:
[2025-11-20 21:44:06] NAME="CentOS Linux"
[2025-11-20 21:44:06] VERSION="7 (Core)"
[2025-11-20 21:44:06] ID="centos"
[2025-11-20 21:44:06] ID_LIKE="rhel fedora"
[2025-11-20 21:44:06] VERSION_ID="7"
[2025-11-20 21:44:06] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-20 21:44:06] ANSI_COLOR="0;31"
[2025-11-20 21:44:06] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-20 21:44:06] HOME_URL="https://www.centos.org/"
[2025-11-20 21:44:06] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-20 21:44:06] 
[2025-11-20 21:44:06] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-20 21:44:06] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-20 21:44:06] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-20 21:44:06] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-20 21:44:06] 
[2025-11-20 21:44:06] 2025-11-20 20:42:56,397 | INFO     | ***************************************
[2025-11-20 21:44:06] 2025-11-20 20:42:56,900 | INFO     | executing command: df -mP /var/lib/boinc/slots/8
[2025-11-20 21:44:06] 2025-11-20 20:42:57,067 | INFO     | sufficient remaining disk space (494125711360 B)
[2025-11-20 21:44:06] 2025-11-20 20:42:57,068 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-20 21:44:06] 2025-11-20 20:42:57,068 | INFO     | current server update state: UPDATING_FINAL
[2025-11-20 21:44:06] 2025-11-20 20:42:57,068 | INFO     | update_server=False
[2025-11-20 21:44:06] 2025-11-20 20:42:57,068 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-20 21:44:06] 2025-11-20 20:42:57,398 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-20 21:44:06] 2025-11-20 20:42:57,398 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-20 21:44:06] 2025-11-20 20:42:57,399 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-20 21:44:06] 2025-11-20 20:42:57,399 | INFO     | will abort loop
[2025-11-20 21:44:06] 2025-11-20 20:42:57,712 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-20 21:44:06] 2025-11-20 20:42:57,714 | INFO     | all data control threads have been joined
[2025-11-20 21:44:06] 2025-11-20 20:42:58,074 | INFO     | [job] retrieve thread has finished
[2025-11-20 21:44:06] 2025-11-20 20:42:58,206 | INFO     | all payload control threads have been joined
[2025-11-20 21:44:06] 2025-11-20 20:42:58,225 | INFO     | all job control threads have been joined
[2025-11-20 21:44:06] 2025-11-20 20:42:58,228 | INFO     | [data] copytool_in thread has finished
[2025-11-20 21:44:06] 2025-11-20 20:42:58,342 | INFO     | [payload] execute_payloads thread has finished
[2025-11-20 21:44:06] 2025-11-20 20:42:58,404 | INFO     | [job] job monitor thread has finished
[2025-11-20 21:44:06] 2025-11-20 20:42:58,440 | INFO     | [payload] validate_post thread has finished
[2025-11-20 21:44:06] 2025-11-20 20:42:58,639 | INFO     | [job] validate thread has finished
[2025-11-20 21:44:06] 2025-11-20 20:42:58,720 | INFO     | [data] control thread has finished
[2025-11-20 21:44:06] 2025-11-20 20:42:58,994 | INFO     | [job] create_data_payload thread has finished
[2025-11-20 21:44:06] 2025-11-20 20:42:59,003 | INFO     | [payload] validate_pre thread has finished
[2025-11-20 21:44:06] 2025-11-20 20:42:59,211 | INFO     | [payload] control thread has finished
[2025-11-20 21:44:06] 2025-11-20 20:42:59,231 | INFO     | [job] control thread has finished
[2025-11-20 21:44:06] 2025-11-20 20:42:59,432 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-20 21:44:06] 2025-11-20 20:42:59,609 | INFO     | [payload] failed_post thread has finished
[2025-11-20 21:44:06] 2025-11-20 20:42:59,718 | INFO     | [data] copytool_out thread has finished
[2025-11-20 21:44:06] 2025-11-20 20:42:59,826 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-20 21:44:06] 2025-11-20 20:43:00,832 | INFO     | [job] queue monitor thread has finished
[2025-11-20 21:44:06] 2025-11-20 20:43:03,442 | INFO     | [data] queue_monitor thread has finished
[2025-11-20 21:44:06] 2025-11-20 20:43:07,979 | INFO     | job.realtimelogging is not enabled
[2025-11-20 21:44:06] 2025-11-20 20:43:08,985 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-20 21:44:06] 2025-11-20 20:43:26,653 | INFO     | PID=24482 has CPU usage=2.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-20 21:44:06] 2025-11-20 20:43:26,654 | INFO     | .. there are 9 such processes running
[2025-11-20 21:44:06] 2025-11-20 20:43:26,655 | INFO     | found 0 job(s) in 20 queues
[2025-11-20 21:44:06] 2025-11-20 20:43:26,655 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-20 21:44:06] 2025-11-20 20:43:26,656 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-20 21:44:06] 2025-11-20 20:43:56,134 | INFO     | [monitor] cgroup control has ended
[2025-11-20 21:44:06] 2025-11-20 20:43:57,923 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140538809874240)>', '<ExcThread(monitor, started 140538208564992)>']
[2025-11-20 21:44:06] 2025-11-20 20:43:58,841 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-20 21:44:06] 2025-11-20 20:43:58,842 | INFO     | [monitor] control thread has ended
[2025-11-20 21:44:06] 2025-11-20 20:44:02,949 | INFO     | all workflow threads have been joined
[2025-11-20 21:44:06] 2025-11-20 20:44:02,949 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-20 21:44:06] 2025-11-20 20:44:02,950 | INFO     | traces error code: 0
[2025-11-20 21:44:06] 2025-11-20 20:44:02,950 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-20 21:44:06] 2025-11-20 20:44:03,214 [wrapper] ==== pilot stdout END ====
[2025-11-20 21:44:06] 2025-11-20 20:44:03,319 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-20 21:44:06] 2025-11-20 20:44:03,438 [wrapper] pilotpid: 24482
[2025-11-20 21:44:06] 2025-11-20 20:44:03,587 [wrapper] Pilot exit status: 0
[2025-11-20 21:44:06] 2025-11-20 20:44:04,059 [wrapper] pandaids: 6891576608
[2025-11-20 21:44:06] 2025-11-20 20:44:04,106 [wrapper] cleanup supervisor_pilot 11552 24483
[2025-11-20 21:44:06] 2025-11-20 20:44:04,261 [wrapper] Test setup, not cleaning
[2025-11-20 21:44:06] 2025-11-20 20:44:04,266 [wrapper] apfmon messages muted
[2025-11-20 21:44:06] 2025-11-20 20:44:04,330 [wrapper] ==== wrapper stdout END ====
[2025-11-20 21:44:06] 2025-11-20 20:44:04,457 [wrapper] ==== wrapper stderr END ====
[2025-11-20 21:44:06]  *** Error codes and diagnostics ***
[2025-11-20 21:44:06]     "exeErrorCode": 0,
[2025-11-20 21:44:06]     "exeErrorDiag": "",
[2025-11-20 21:44:06]     "pilotErrorCode": 0,
[2025-11-20 21:44:06]     "pilotErrorDiag": "",
[2025-11-20 21:44:06]  *** Listing of results directory ***
[2025-11-20 21:44:06] total 1331776
[2025-11-20 21:44:06] -rw-r--r--. 1 boinc boinc    576529 Nov 18 17:24 pilot3.tar.gz
[2025-11-20 21:44:06] -rwx------. 1 boinc boinc     36292 Nov 18 17:38 runpilot2-wrapper.sh
[2025-11-20 21:44:06] -rw-r--r--. 1 boinc boinc      5112 Nov 18 17:38 queuedata.json
[2025-11-20 21:44:06] -rw-r--r--. 1 boinc boinc       100 Nov 19 20:08 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-20 21:44:06] -rwxr-xr-x. 1 boinc boinc      7986 Nov 19 20:08 run_atlas
[2025-11-20 21:44:06] -rw-r--r--. 1 boinc boinc       105 Nov 19 20:08 job.xml
[2025-11-20 21:44:06] -rw-r--r--. 2 boinc boinc 408670558 Nov 19 20:08 EVNT.47493065._000372.pool.root.1
[2025-11-20 21:44:06] -rw-r--r--. 1 boinc boinc      6387 Nov 19 20:08 init_data.xml
[2025-11-20 21:44:06] -rw-r--r--. 2 boinc boinc     15120 Nov 19 20:08 start_atlas.sh
[2025-11-20 21:44:06] drwxrwx--x. 2 boinc boinc        68 Nov 19 20:08 shared
[2025-11-20 21:44:06] -rw-r--r--. 2 boinc boinc    590098 Nov 19 20:08 input.tar.gz
[2025-11-20 21:44:06] -rw-r--r--. 1 boinc boinc         0 Nov 19 20:08 boinc_lockfile
[2025-11-20 21:44:06] -rw-r--r--. 1 boinc boinc      2773 Nov 19 20:08 pandaJob.out
[2025-11-20 21:44:06] -rw-------. 1 boinc boinc    989434 Nov 19 20:11 agis_schedconf.cvmfs.json
[2025-11-20 21:44:06] drwx------. 5 boinc boinc      4096 Nov 19 20:11 pilot3
[2025-11-20 21:44:06] -rw-r--r--. 1 boinc boinc       533 Nov 20 21:28 boinc_task_state.xml
[2025-11-20 21:44:06] -rw-------. 1 boinc boinc 921517695 Nov 20 21:41 HITS.47493068._003717.pool.root.1
[2025-11-20 21:44:06] -rw-------. 1 boinc boinc      1034 Nov 20 21:42 memory_monitor_summary.json
[2025-11-20 21:44:06] -rw-------. 1 boinc boinc   1526164 Nov 20 21:42 agis_ddmendpoints.agis.ALL.json
[2025-11-20 21:44:06] -rw-------. 1 boinc boinc   2576540 Nov 20 21:42 log.47493068._003717.job.log.tgz.1
[2025-11-20 21:44:06] -rw-------. 1 boinc boinc      7942 Nov 20 21:42 heartbeat.json
[2025-11-20 21:44:06] -rw-------. 1 boinc boinc        95 Nov 20 21:43 pilot_heartbeat.json
[2025-11-20 21:44:06] -rw-r--r--. 1 boinc boinc      8192 Nov 20 21:43 boinc_mmap_file
[2025-11-20 21:44:06] -rw-r--r--. 1 boinc boinc        29 Nov 20 21:43 wrapper_checkpoint.txt
[2025-11-20 21:44:06] -rw-------. 1 boinc boinc      5142 Nov 20 21:44 pilotlog.txt
[2025-11-20 21:44:06] -rw-------. 1 boinc boinc  12245433 Nov 20 21:44 log.47493068._003717.job.log.1
[2025-11-20 21:44:06] -rw-------. 1 boinc boinc       353 Nov 20 21:44 output.list
[2025-11-20 21:44:06] -rw-r--r--. 1 boinc boinc       620 Nov 20 21:44 runtime_log
[2025-11-20 21:44:06] -rw-------. 1 boinc boinc  14837760 Nov 20 21:44 result.tar.gz
[2025-11-20 21:44:06] -rw-------. 1 boinc boinc       662 Nov 20 21:44 sVzKDmctdf8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmZqFKDmpTGSMm.diag
[2025-11-20 21:44:06] -rw-r--r--. 1 boinc boinc      8703 Nov 20 21:44 runtime_log.err
[2025-11-20 21:44:06] -rw-r--r--. 1 boinc boinc     20977 Nov 20 21:44 stderr.txt
[2025-11-20 21:44:06] HITS file was successfully produced:
[2025-11-20 21:44:06] -rw-------. 1 boinc boinc 921517695 Nov 20 21:41 shared/HITS.pool.root.1
[2025-11-20 21:44:06]  *** Contents of shared directory: ***
[2025-11-20 21:44:06] total 1314104
[2025-11-20 21:44:06] -rw-r--r--. 2 boinc boinc 408670558 Nov 19 20:08 ATLAS.root_0
[2025-11-20 21:44:06] -rw-r--r--. 2 boinc boinc     15120 Nov 19 20:08 start_atlas.sh
[2025-11-20 21:44:06] -rw-r--r--. 2 boinc boinc    590098 Nov 19 20:08 input.tar.gz
[2025-11-20 21:44:06] -rw-------. 1 boinc boinc 921517695 Nov 20 21:41 HITS.pool.root.1
[2025-11-20 21:44:06] -rw-------. 1 boinc boinc  14837760 Nov 20 21:44 result.tar.gz
21:44:08 (20677): run_atlas exited; CPU time 341945.861491
21:44:08 (20677): called boinc_finish(0)

</stderr_txt>
]]>

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