Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
21:01:44 (7144): wrapper (7.7.26015): starting
21:01:44 (7144): wrapper: running run_atlas (--nthreads 8)
[2025-11-21 21:01:44] Arguments: --nthreads 8
[2025-11-21 21:01:44] Threads: 8
[2025-11-21 21:01:44] Checking for CVMFS
[2025-11-21 21:01:45] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-21 21:01:45] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-21 21:01:45] Running cvmfs_config stat atlas.cern.ch
[2025-11-21 21:01:46] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-21 21:01:46] 2.11.2.0 18594 77235 93504 153141 3 230 20705227 25165825 4573 130560 2 22624820 99.897 11831696 2178 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-11-21 21:01:46] CVMFS is ok
[2025-11-21 21:01:46] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-21 21:01:46] Checking for apptainer binary...
[2025-11-21 21:01:46] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-21 21:01:46] Running /usr/bin/apptainer --version
[2025-11-21 21:01:46] apptainer version 1.3.2-1.el7
[2025-11-21 21:01:46] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-21 21:01:47] cg-vwn256.simple-grid.lan
[2025-11-21 21:01:47] apptainer works
[2025-11-21 21:01:47] Set ATHENA_PROC_NUMBER=8
[2025-11-21 21:01:47] Set ATHENA_CORE_NUMBER=8
[2025-11-21 21:01:47] Starting ATLAS job with PandaID=6891572666
[2025-11-21 21:01:47] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/11 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-22 22:02:45]  *** The last 200 lines of the pilot log: ***
[2025-11-22 22:02:45] 2025-11-22 21:01:30,615 | INFO     | time since job start (89792s) is within the limit (172800.0s)
[2025-11-22 22:02:45] 2025-11-22 21:01:31,687 | INFO     | monitor loop #6013: job 0:6891572666 is in state 'finished'
[2025-11-22 22:02:45] 2025-11-22 21:01:31,688 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-22 22:02:45] 2025-11-22 21:01:32,626 | INFO     | time since job start (89794s) is within the limit (172800.0s)
[2025-11-22 22:02:45] 2025-11-22 21:01:34,191 | INFO     | monitor loop #6014: job 0:6891572666 is in state 'finished'
[2025-11-22 22:02:45] 2025-11-22 21:01:34,192 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-22 22:02:45] 2025-11-22 21:01:34,633 | INFO     | time since job start (89796s) is within the limit (172800.0s)
[2025-11-22 22:02:45] 2025-11-22 21:01:36,640 | INFO     | time since job start (89798s) is within the limit (172800.0s)
[2025-11-22 22:02:45] 2025-11-22 21:01:36,697 | INFO     | monitor loop #6015: job 0:6891572666 is in state 'finished'
[2025-11-22 22:02:45] 2025-11-22 21:01:36,698 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-22 22:02:45] 2025-11-22 21:01:38,647 | INFO     | time since job start (89800s) is within the limit (172800.0s)
[2025-11-22 22:02:45] 2025-11-22 21:01:39,212 | INFO     | monitor loop #6016: job 0:6891572666 is in state 'finished'
[2025-11-22 22:02:45] 2025-11-22 21:01:39,213 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-22 22:02:45] 2025-11-22 21:01:39,277 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-22 22:02:45] 2025-11-22 21:01:39,278 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2025-11-22 22:02:45] 2025-11-22 21:01:39,280 | INFO     | using path: /var/lib/boinc/slots/11/PanDA_Pilot-6891572666/memory_monitor_summary.json (trf name=prmon)
[2025-11-22 22:02:45] 2025-11-22 21:01:39,280 | INFO     | extracted standard info from prmon json
[2025-11-22 22:02:45] 2025-11-22 21:01:39,281 | INFO     | extracted standard memory fields from prmon json
[2025-11-22 22:02:45] 2025-11-22 21:01:39,281 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-22 22:02:45] 2025-11-22 21:01:39,322 | INFO     | fitting pss+swap vs Time
[2025-11-22 22:02:45] 2025-11-22 21:01:39,324 | INFO     | sum of square deviations: 976965202350.2069
[2025-11-22 22:02:45] 2025-11-22 21:01:39,407 | INFO     | sum of deviations: 2397343869879.229
[2025-11-22 22:02:45] 2025-11-22 21:01:39,407 | INFO     | mean x: 1763800447.6698499
[2025-11-22 22:02:45] 2025-11-22 21:01:39,407 | INFO     | mean y: 2850515.7360163713
[2025-11-22 22:02:45] 2025-11-22 21:01:39,407 | INFO     | intersect: -4325283363.279883
[2025-11-22 22:02:45] 2025-11-22 21:01:39,409 | INFO     | chi2: 17.741613335425683
[2025-11-22 22:02:45] 2025-11-22 21:01:39,411 | INFO     | sum of square deviations: 967003520025.8428
[2025-11-22 22:02:45] 2025-11-22 21:01:39,484 | INFO     | sum of deviations: 2874787005864.831
[2025-11-22 22:02:45] 2025-11-22 21:01:39,484 | INFO     | mean x: 1763800295.1738536
[2025-11-22 22:02:45] 2025-11-22 21:01:39,485 | INFO     | mean y: 2857823.571526352
[2025-11-22 22:02:45] 2025-11-22 21:01:39,485 | INFO     | intersect: -5240711682.122558
[2025-11-22 22:02:45] 2025-11-22 21:01:39,487 | INFO     | chi2: 14.57250930997977
[2025-11-22 22:02:45] 2025-11-22 21:01:39,487 | INFO     | current chi2=14.57250930997977 (change=17.862547027321263 %)
[2025-11-22 22:02:45] 2025-11-22 21:01:39,487 | INFO     | right removable region: 1460
[2025-11-22 22:02:45] 2025-11-22 21:01:39,492 | INFO     | sum of square deviations: 967002473875.8408
[2025-11-22 22:02:45] 2025-11-22 21:01:39,574 | INFO     | sum of deviations: 1935360299662.1626
[2025-11-22 22:02:45] 2025-11-22 21:01:39,575 | INFO     | mean x: 1763800600.1738536
[2025-11-22 22:02:45] 2025-11-22 21:01:39,575 | INFO     | mean y: 2857583.9678302533
[2025-11-22 22:02:45] 2025-11-22 21:01:39,575 | INFO     | intersect: -3527215761.568474
[2025-11-22 22:02:45] 2025-11-22 21:01:39,577 | INFO     | chi2: 15.08780023108047
[2025-11-22 22:02:45] 2025-11-22 21:01:39,577 | INFO     | current chi2=15.08780023108047 (change=14.958127280601897 %)
[2025-11-22 22:02:45] 2025-11-22 21:01:39,577 | INFO     | left removable region: 10
[2025-11-22 22:02:45] 2025-11-22 21:01:39,579 | INFO     | sum of square deviations: 945325310216.9493
[2025-11-22 22:02:45] 2025-11-22 21:01:39,666 | INFO     | sum of deviations: 2402495306199.868
[2025-11-22 22:02:45] 2025-11-22 21:01:39,667 | INFO     | mean x: 1763800569.6772413
[2025-11-22 22:02:45] 2025-11-22 21:01:39,667 | INFO     | mean y: 2868346.356551724
[2025-11-22 22:02:45] 2025-11-22 21:01:39,667 | INFO     | intersect: -4479739433.128085
[2025-11-22 22:02:45] 2025-11-22 21:01:39,669 | INFO     | chi2: 11.074553395870893
[2025-11-22 22:02:45] 2025-11-22 21:01:39,669 | INFO     | current memory leak: 2.54 B/s (using 1450 data points, chi2=11.07)
[2025-11-22 22:02:45] 2025-11-22 21:01:39,671 | INFO     | could have reported an average CPU frequency of 1999 MHz (49 samples)
[2025-11-22 22:02:45] 2025-11-22 21:01:39,672 | INFO     | ..............................
[2025-11-22 22:02:45] 2025-11-22 21:01:39,672 | INFO     | . Timing measurements:
[2025-11-22 22:02:45] 2025-11-22 21:01:39,672 | INFO     | . get job = 0 s
[2025-11-22 22:02:45] 2025-11-22 21:01:39,672 | INFO     | . initial setup = 13 s
[2025-11-22 22:02:45] 2025-11-22 21:01:39,672 | INFO     | . payload setup = 46 s
[2025-11-22 22:02:45] 2025-11-22 21:01:39,672 | INFO     | . stage-in = 0 s
[2025-11-22 22:02:45] 2025-11-22 21:01:39,673 | INFO     | . payload execution = 89449 s
[2025-11-22 22:02:45] 2025-11-22 21:01:39,673 | INFO     | . stage-out = 6 s
[2025-11-22 22:02:45] 2025-11-22 21:01:39,673 | INFO     | . log creation = 2 s
[2025-11-22 22:02:45] 2025-11-22 21:01:39,673 | INFO     | ..............................
[2025-11-22 22:02:45] 2025-11-22 21:01:40,188 | INFO     | 
[2025-11-22 22:02:45] 2025-11-22 21:01:40,189 | INFO     | job summary report
[2025-11-22 22:02:45] 2025-11-22 21:01:40,189 | INFO     | --------------------------------------------------
[2025-11-22 22:02:45] 2025-11-22 21:01:40,189 | INFO     | PanDA job id: 6891572666
[2025-11-22 22:02:45] 2025-11-22 21:01:40,189 | INFO     | task id: 47493068
[2025-11-22 22:02:45] 2025-11-22 21:01:40,189 | INFO     | errors: (none)
[2025-11-22 22:02:45] 2025-11-22 21:01:40,189 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-22 22:02:45] 2025-11-22 21:01:40,189 | INFO     | pilot state: finished 
[2025-11-22 22:02:45] 2025-11-22 21:01:40,189 | INFO     | transexitcode: 0
[2025-11-22 22:02:45] 2025-11-22 21:01:40,189 | INFO     | exeerrorcode: 0
[2025-11-22 22:02:45] 2025-11-22 21:01:40,189 | INFO     | exeerrordiag: 
[2025-11-22 22:02:45] 2025-11-22 21:01:40,189 | INFO     | exitcode: 0
[2025-11-22 22:02:45] 2025-11-22 21:01:40,190 | INFO     | exitmsg: OK
[2025-11-22 22:02:45] 2025-11-22 21:01:40,190 | INFO     | cpuconsumptiontime: 334362 s
[2025-11-22 22:02:45] 2025-11-22 21:01:40,190 | INFO     | nevents: 1000
[2025-11-22 22:02:45] 2025-11-22 21:01:40,190 | INFO     | neventsw: 0
[2025-11-22 22:02:45] 2025-11-22 21:01:40,190 | INFO     | pid: 17510
[2025-11-22 22:02:45] 2025-11-22 21:01:40,190 | INFO     | pgrp: 17510
[2025-11-22 22:02:45] 2025-11-22 21:01:40,190 | INFO     | corecount: 8
[2025-11-22 22:02:45] 2025-11-22 21:01:40,190 | INFO     | event service: False
[2025-11-22 22:02:45] 2025-11-22 21:01:40,190 | INFO     | sizes: {0: 2298519, 1: 2298774, 2: 2298774, 12: 2298802, 23: 2298830, 34: 2298858, 45: 2299014, 55: 2299042, 66: 2299070, 77: 2299098, 88: 2299154, 92: 2299724, 98
[2025-11-22 22:02:45] 2025-11-22 21:01:40,190 | INFO     | --------------------------------------------------
[2025-11-22 22:02:45] 2025-11-22 21:01:40,190 | INFO     | 
[2025-11-22 22:02:45] 2025-11-22 21:01:40,191 | INFO     | executing command: ls -lF /var/lib/boinc/slots/11
[2025-11-22 22:02:45] 2025-11-22 21:01:40,667 | INFO     | time since job start (89802s) is within the limit (172800.0s)
[2025-11-22 22:02:45] 2025-11-22 21:01:40,695 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-22 22:02:45] 2025-11-22 21:01:40,695 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-22 22:02:45] 2025-11-22 21:01:40,695 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-22 22:02:45] 2025-11-22 21:01:40,695 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-22 22:02:45] 2025-11-22 21:01:40,695 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-22 22:02:45] 2025-11-22 21:01:40,695 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-22 22:02:45] 2025-11-22 21:01:40,696 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-22 22:02:45] 2025-11-22 21:01:40,696 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-22 22:02:45] 2025-11-22 21:01:40,696 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-22 22:02:45] 2025-11-22 21:01:40,696 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-22 22:02:45] 2025-11-22 21:01:40,696 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-22 22:02:45] 2025-11-22 21:01:40,696 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-22 22:02:45] 2025-11-22 21:01:40,696 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-22 22:02:45] 2025-11-22 21:01:40,696 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-22 22:02:45] 2025-11-22 21:01:40,696 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-22 22:02:45] 2025-11-22 21:01:40,696 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-22 22:02:45] 2025-11-22 21:01:40,696 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-22 22:02:45] 2025-11-22 21:01:40,697 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-22 22:02:45] 2025-11-22 21:01:40,697 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-22 22:02:45] 2025-11-22 21:01:40,697 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-22 22:02:45] 2025-11-22 21:01:40,697 | INFO     | job 6891572666 has completed (purged errors)
[2025-11-22 22:02:45] 2025-11-22 21:01:40,697 | INFO     | overall cleanup function is called
[2025-11-22 22:02:45] 2025-11-22 21:01:41,716 | INFO     | --- collectZombieJob: --- 10, [17510]
[2025-11-22 22:02:45] 2025-11-22 21:01:41,716 | INFO     | zombie collector waiting for pid 17510
[2025-11-22 22:02:45] 2025-11-22 21:01:41,717 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-22 22:02:45] 2025-11-22 21:01:41,717 | INFO     | collected zombie processes
[2025-11-22 22:02:45] 2025-11-22 21:01:41,717 | INFO     | will attempt to kill all subprocesses of pid=17510
[2025-11-22 22:02:45] 2025-11-22 21:01:41,846 | INFO     | process IDs to be killed: [17510] (in reverse order)
[2025-11-22 22:02:45] 2025-11-22 21:01:42,817 | WARNING  | found no corresponding commands to process id(s)
[2025-11-22 22:02:45] 2025-11-22 21:01:42,817 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-22 22:02:45] 2025-11-22 21:01:42,820 | INFO     | did not find any defunct processes belonging to 17510
[2025-11-22 22:02:45] 2025-11-22 21:01:42,823 | INFO     | did not find any defunct processes belonging to 17510
[2025-11-22 22:02:45] 2025-11-22 21:01:42,833 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-22 22:02:45] 2025-11-22 21:01:42,833 | INFO     | ready for new job
[2025-11-22 22:02:45] 2025-11-22 21:01:42,833 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-22 22:02:45] 2025-11-22 21:01:42,840 | INFO     | ***************************************
[2025-11-22 22:02:45] 2025-11-22 21:01:42,840 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-22 22:02:45] 2025-11-22 21:01:42,840 | INFO     | ***************************************
[2025-11-22 22:02:45] 2025-11-22 21:01:42,840 | INFO     | 
[2025-11-22 22:02:45] 2025-11-22 21:01:42,841 | INFO     | pilot is running in a VM
[2025-11-22 22:02:45] 2025-11-22 21:01:42,841 | INFO     | architecture information:
[2025-11-22 22:02:45] 2025-11-22 21:01:42,852 | INFO     | executing command: cat /etc/os-release
[2025-11-22 22:02:45] 2025-11-22 21:01:43,157 | INFO     | cat /etc/os-release:
[2025-11-22 22:02:45] NAME="CentOS Linux"
[2025-11-22 22:02:45] VERSION="7 (Core)"
[2025-11-22 22:02:45] ID="centos"
[2025-11-22 22:02:45] ID_LIKE="rhel fedora"
[2025-11-22 22:02:45] VERSION_ID="7"
[2025-11-22 22:02:45] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-22 22:02:45] ANSI_COLOR="0;31"
[2025-11-22 22:02:45] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-22 22:02:45] HOME_URL="https://www.centos.org/"
[2025-11-22 22:02:45] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-22 22:02:45] 
[2025-11-22 22:02:45] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-22 22:02:45] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-22 22:02:45] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-22 22:02:45] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-22 22:02:45] 
[2025-11-22 22:02:45] 2025-11-22 21:01:43,157 | INFO     | ***************************************
[2025-11-22 22:02:45] 2025-11-22 21:01:43,661 | INFO     | executing command: df -mP /var/lib/boinc/slots/11
[2025-11-22 22:02:45] 2025-11-22 21:01:43,959 | INFO     | sufficient remaining disk space (495148072960 B)
[2025-11-22 22:02:45] 2025-11-22 21:01:43,960 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-22 22:02:45] 2025-11-22 21:01:43,960 | INFO     | current server update state: UPDATING_FINAL
[2025-11-22 22:02:45] 2025-11-22 21:01:43,960 | INFO     | update_server=False
[2025-11-22 22:02:45] 2025-11-22 21:01:43,960 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-22 22:02:45] 2025-11-22 21:01:44,247 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-22 22:02:45] 2025-11-22 21:01:44,247 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-22 22:02:45] 2025-11-22 21:01:44,248 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-22 22:02:45] 2025-11-22 21:01:44,248 | INFO     | will abort loop
[2025-11-22 22:02:45] 2025-11-22 21:01:44,670 | INFO     | all data control threads have been joined
[2025-11-22 22:02:45] 2025-11-22 21:01:44,712 | INFO     | all job control threads have been joined
[2025-11-22 22:02:45] 2025-11-22 21:01:44,841 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-22 22:02:45] 2025-11-22 21:01:44,966 | INFO     | [job] retrieve thread has finished
[2025-11-22 22:02:45] 2025-11-22 21:01:45,031 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-22 22:02:45] 2025-11-22 21:01:45,063 | INFO     | all payload control threads have been joined
[2025-11-22 22:02:45] 2025-11-22 21:01:45,181 | INFO     | [payload] execute_payloads thread has finished
[2025-11-22 22:02:45] 2025-11-22 21:01:45,214 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-22 22:02:45] 2025-11-22 21:01:45,253 | INFO     | [job] job monitor thread has finished
[2025-11-22 22:02:45] 2025-11-22 21:01:45,484 | INFO     | [payload] validate_pre thread has finished
[2025-11-22 22:02:45] 2025-11-22 21:01:45,583 | INFO     | [job] validate thread has finished
[2025-11-22 22:02:45] 2025-11-22 21:01:45,676 | INFO     | [data] control thread has finished
[2025-11-22 22:02:45] 2025-11-22 21:01:45,718 | INFO     | [job] control thread has finished
[2025-11-22 22:02:45] 2025-11-22 21:01:45,754 | INFO     | [payload] validate_post thread has finished
[2025-11-22 22:02:45] 2025-11-22 21:01:45,755 | INFO     | [payload] failed_post thread has finished
[2025-11-22 22:02:45] 2025-11-22 21:01:45,847 | INFO     | [job] queue monitor thread has finished
[2025-11-22 22:02:45] 2025-11-22 21:01:45,986 | INFO     | [job] create_data_payload thread has finished
[2025-11-22 22:02:45] 2025-11-22 21:01:46,068 | INFO     | [payload] control thread has finished
[2025-11-22 22:02:45] 2025-11-22 21:01:46,131 | INFO     | [data] copytool_in thread has finished
[2025-11-22 22:02:45] 2025-11-22 21:01:46,132 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-22 22:02:45] 2025-11-22 21:01:47,038 | INFO     | [data] copytool_out thread has finished
[2025-11-22 22:02:45] 2025-11-22 21:01:50,141 | INFO     | [data] queue_monitor thread has finished
[2025-11-22 22:02:45] 2025-11-22 21:02:13,848 | INFO     | PID=10904 has CPU usage=1.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-22 22:02:45] 2025-11-22 21:02:13,848 | INFO     | .. there are 9 such processes running
[2025-11-22 22:02:45] 2025-11-22 21:02:13,848 | INFO     | found 0 job(s) in 20 queues
[2025-11-22 22:02:45] 2025-11-22 21:02:13,848 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-22 22:02:45] 2025-11-22 21:02:13,848 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-22 22:02:45] 2025-11-22 21:02:34,334 | INFO     | [monitor] cgroup control has ended
[2025-11-22 22:02:45] 2025-11-22 21:02:34,994 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140144200922944)>', '<ExcThread(monitor, started 140143751055104)>']
[2025-11-22 22:02:45] 2025-11-22 21:02:35,980 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-22 22:02:45] 2025-11-22 21:02:35,981 | INFO     | [monitor] control thread has ended
[2025-11-22 22:02:45] 2025-11-22 21:02:40,020 | INFO     | all workflow threads have been joined
[2025-11-22 22:02:45] 2025-11-22 21:02:40,021 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-22 22:02:45] 2025-11-22 21:02:40,021 | INFO     | traces error code: 0
[2025-11-22 22:02:45] 2025-11-22 21:02:40,022 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-22 22:02:45] 2025-11-22 21:02:40,511 [wrapper] ==== pilot stdout END ====
[2025-11-22 22:02:45] 2025-11-22 21:02:40,594 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-22 22:02:45] 2025-11-22 21:02:40,686 [wrapper] pilotpid: 10904
[2025-11-22 22:02:45] 2025-11-22 21:02:40,732 [wrapper] Pilot exit status: 0
[2025-11-22 22:02:45] 2025-11-22 21:02:41,111 [wrapper] pandaids: 6891572666
[2025-11-22 22:02:45] 2025-11-22 21:02:42,020 [wrapper] cleanup supervisor_pilot  2501 10905
[2025-11-22 22:02:45] 2025-11-22 21:02:42,127 [wrapper] Test setup, not cleaning
[2025-11-22 22:02:45] 2025-11-22 21:02:42,245 [wrapper] apfmon messages muted
[2025-11-22 22:02:45] 2025-11-22 21:02:42,350 [wrapper] ==== wrapper stdout END ====
[2025-11-22 22:02:45] 2025-11-22 21:02:42,432 [wrapper] ==== wrapper stderr END ====
[2025-11-22 22:02:45]  *** Error codes and diagnostics ***
[2025-11-22 22:02:45]     "exeErrorCode": 0,
[2025-11-22 22:02:45]     "exeErrorDiag": "",
[2025-11-22 22:02:45]     "pilotErrorCode": 0,
[2025-11-22 22:02:45]     "pilotErrorDiag": "",
[2025-11-22 22:02:45]  *** Listing of results directory ***
[2025-11-22 22:02:45] total 1333376
[2025-11-22 22:02:45] -rw-r--r--. 1 boinc boinc    576529 Nov 18 16:47 pilot3.tar.gz
[2025-11-22 22:02:45] -rw-r--r--. 1 boinc boinc      5112 Nov 18 17:23 queuedata.json
[2025-11-22 22:02:45] -rwx------. 1 boinc boinc     36292 Nov 18 17:24 runpilot2-wrapper.sh
[2025-11-22 22:02:45] -rw-r--r--. 1 boinc boinc       100 Nov 21 21:01 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-22 22:02:45] -rwxr-xr-x. 1 boinc boinc      7986 Nov 21 21:01 run_atlas
[2025-11-22 22:02:45] -rw-r--r--. 1 boinc boinc       105 Nov 21 21:01 job.xml
[2025-11-22 22:02:45] -rw-r--r--. 2 boinc boinc 410128339 Nov 21 21:01 EVNT.47493065._000345.pool.root.1
[2025-11-22 22:02:45] -rw-r--r--. 1 boinc boinc      6388 Nov 21 21:01 init_data.xml
[2025-11-22 22:02:45] -rw-r--r--. 2 boinc boinc     15120 Nov 21 21:01 start_atlas.sh
[2025-11-22 22:02:45] drwxrwx--x. 2 boinc boinc        68 Nov 21 21:01 shared
[2025-11-22 22:02:45] -rw-r--r--. 2 boinc boinc    590101 Nov 21 21:01 input.tar.gz
[2025-11-22 22:02:45] -rw-r--r--. 1 boinc boinc         0 Nov 21 21:01 boinc_lockfile
[2025-11-22 22:02:45] -rw-r--r--. 1 boinc boinc      2772 Nov 21 21:01 pandaJob.out
[2025-11-22 22:02:45] -rw-------. 1 boinc boinc    989798 Nov 21 21:04 agis_schedconf.cvmfs.json
[2025-11-22 22:02:45] drwx------. 5 boinc boinc      4096 Nov 21 21:04 pilot3
[2025-11-22 22:02:45] -rw-r--r--. 1 boinc boinc       533 Nov 22 21:35 boinc_task_state.xml
[2025-11-22 22:02:45] -rw-------. 1 boinc boinc 922344586 Nov 22 21:58 HITS.47493068._003447.pool.root.1
[2025-11-22 22:02:45] -rw-------. 1 boinc boinc      1031 Nov 22 21:59 memory_monitor_summary.json
[2025-11-22 22:02:45] -rw-------. 1 boinc boinc   1526164 Nov 22 21:59 agis_ddmendpoints.agis.ALL.json
[2025-11-22 22:02:45] -rw-------. 1 boinc boinc   2539478 Nov 22 21:59 log.47493068._003447.job.log.tgz.1
[2025-11-22 22:02:45] -rw-------. 1 boinc boinc        95 Nov 22 22:01 pilot_heartbeat.json
[2025-11-22 22:02:45] -rw-------. 1 boinc boinc      8626 Nov 22 22:01 heartbeat.json
[2025-11-22 22:02:45] -rw-r--r--. 1 boinc boinc      8192 Nov 22 22:02 boinc_mmap_file
[2025-11-22 22:02:45] -rw-r--r--. 1 boinc boinc        29 Nov 22 22:02 wrapper_checkpoint.txt
[2025-11-22 22:02:45] -rw-------. 1 boinc boinc      5071 Nov 22 22:02 pilotlog.txt
[2025-11-22 22:02:45] -rw-------. 1 boinc boinc  11960126 Nov 22 22:02 log.47493068._003447.job.log.1
[2025-11-22 22:02:45] -rw-------. 1 boinc boinc       353 Nov 22 22:02 output.list
[2025-11-22 22:02:45] -rw-r--r--. 1 boinc boinc       620 Nov 22 22:02 runtime_log
[2025-11-22 22:02:45] -rw-------. 1 boinc boinc  14520320 Nov 22 22:02 result.tar.gz
[2025-11-22 22:02:45] -rw-r--r--. 1 boinc boinc      8717 Nov 22 22:02 runtime_log.err
[2025-11-22 22:02:45] -rw-------. 1 boinc boinc       662 Nov 22 22:02 2CMKDmMgdf8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm7mFKDmts8lnm.diag
[2025-11-22 22:02:45] -rw-r--r--. 1 boinc boinc     21412 Nov 22 22:02 stderr.txt
[2025-11-22 22:02:45] HITS file was successfully produced:
[2025-11-22 22:02:45] -rw-------. 1 boinc boinc 922344586 Nov 22 21:58 shared/HITS.pool.root.1
[2025-11-22 22:02:45]  *** Contents of shared directory: ***
[2025-11-22 22:02:45] total 1316020
[2025-11-22 22:02:45] -rw-r--r--. 2 boinc boinc 410128339 Nov 21 21:01 ATLAS.root_0
[2025-11-22 22:02:45] -rw-r--r--. 2 boinc boinc     15120 Nov 21 21:01 start_atlas.sh
[2025-11-22 22:02:45] -rw-r--r--. 2 boinc boinc    590101 Nov 21 21:01 input.tar.gz
[2025-11-22 22:02:45] -rw-------. 1 boinc boinc 922344586 Nov 22 21:58 HITS.pool.root.1
[2025-11-22 22:02:45] -rw-------. 1 boinc boinc  14520320 Nov 22 22:02 result.tar.gz
22:02:47 (7144): run_atlas exited; CPU time 334949.737152
22:02:47 (7144): called boinc_finish(0)

</stderr_txt>
]]>

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