Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
21:54:27 (29332): wrapper (7.7.26015): starting
21:54:27 (29332): wrapper: running run_atlas (--nthreads 8)
[2025-11-20 21:54:27] Arguments: --nthreads 8
[2025-11-20 21:54:27] Threads: 8
[2025-11-20 21:54:27] Checking for CVMFS
[2025-11-20 21:54:28] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-20 21:54:28] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-20 21:54:28] Running cvmfs_config stat atlas.cern.ch
[2025-11-20 21:54:29] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-20 21:54:29] 2.11.2.0 3755 277271 146048 153088 0 313 16567396 25165825 3858 130560 2 136928283 99.892 71776716 3238 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-11-20 21:54:29] CVMFS is ok
[2025-11-20 21:54:29] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-20 21:54:29] Checking for apptainer binary...
[2025-11-20 21:54:29] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-20 21:54:29] Running /usr/bin/apptainer --version
[2025-11-20 21:54:30] apptainer version 1.3.2-1.el7
[2025-11-20 21:54:30] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-20 21:54:43] cg-vwn224.simple-grid.lan
[2025-11-20 21:54:43] apptainer works
[2025-11-20 21:54:43] Set ATHENA_PROC_NUMBER=8
[2025-11-20 21:54:43] Set ATHENA_CORE_NUMBER=8
[2025-11-20 21:54:43] Starting ATLAS job with PandaID=6891572609
[2025-11-20 21:54:43] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-22 00:19:42]  *** The last 200 lines of the pilot log: ***
[2025-11-22 00:19:42] 2025-11-21 23:18:39,335 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-22 00:19:42] 2025-11-21 23:18:40,466 | INFO     | time since job start (94794s) is within the limit (172800.0s)
[2025-11-22 00:19:42] 2025-11-21 23:18:41,838 | INFO     | monitor loop #6343: job 0:6891572609 is in state 'finished'
[2025-11-22 00:19:42] 2025-11-21 23:18:41,839 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-22 00:19:42] 2025-11-21 23:18:42,472 | INFO     | time since job start (94796s) is within the limit (172800.0s)
[2025-11-22 00:19:42] 2025-11-21 23:18:43,550 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-22 00:19:42] 2025-11-21 23:18:43,551 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2025-11-22 00:19:42] 2025-11-21 23:18:43,553 | INFO     | using path: /var/lib/boinc/slots/5/PanDA_Pilot-6891572609/memory_monitor_summary.json (trf name=prmon)
[2025-11-22 00:19:42] 2025-11-21 23:18:43,554 | INFO     | extracted standard info from prmon json
[2025-11-22 00:19:42] 2025-11-21 23:18:43,554 | INFO     | extracted standard memory fields from prmon json
[2025-11-22 00:19:42] 2025-11-21 23:18:43,554 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-22 00:19:42] 2025-11-21 23:18:43,586 | INFO     | fitting pss+swap vs Time
[2025-11-22 00:19:42] 2025-11-21 23:18:43,589 | INFO     | sum of square deviations: 1145797610996.5576
[2025-11-22 00:19:42] 2025-11-21 23:18:43,665 | INFO     | sum of deviations: 4704017522877.814
[2025-11-22 00:19:42] 2025-11-21 23:18:43,665 | INFO     | mean x: 1763719955.8072445
[2025-11-22 00:19:42] 2025-11-21 23:18:43,666 | INFO     | mean y: 2863193.4087968953
[2025-11-22 00:19:42] 2025-11-21 23:18:43,666 | INFO     | intersect: -7238005087.290985
[2025-11-22 00:19:42] 2025-11-21 23:18:43,668 | INFO     | chi2: 19.680249128276802
[2025-11-22 00:19:42] 2025-11-21 23:18:43,671 | INFO     | sum of square deviations: 1134717117300.487
[2025-11-22 00:19:42] 2025-11-21 23:18:43,772 | INFO     | sum of deviations: 5231315415883.738
[2025-11-22 00:19:42] 2025-11-21 23:18:43,773 | INFO     | mean x: 1763719803.311486
[2025-11-22 00:19:42] 2025-11-21 23:18:43,773 | INFO     | mean y: 2870450.2297209604
[2025-11-22 00:19:42] 2025-11-21 23:18:43,773 | INFO     | intersect: -8128296741.742321
[2025-11-22 00:19:42] 2025-11-21 23:18:43,775 | INFO     | chi2: 16.435273676779584
[2025-11-22 00:19:42] 2025-11-21 23:18:43,775 | INFO     | current chi2=16.435273676779584 (change=16.488487672825244 %)
[2025-11-22 00:19:42] 2025-11-21 23:18:43,775 | INFO     | right removable region: 1540
[2025-11-22 00:19:42] 2025-11-21 23:18:43,777 | INFO     | sum of square deviations: 1134715884490.4885
[2025-11-22 00:19:42] 2025-11-21 23:18:43,875 | INFO     | sum of deviations: 4040156205237.0537
[2025-11-22 00:19:42] 2025-11-21 23:18:43,875 | INFO     | mean x: 1763720108.311486
[2025-11-22 00:19:42] 2025-11-21 23:18:43,876 | INFO     | mean y: 2872328.9915639195
[2025-11-22 00:19:42] 2025-11-21 23:18:43,876 | INFO     | intersect: -6276853580.631717
[2025-11-22 00:19:42] 2025-11-21 23:18:43,878 | INFO     | chi2: 14.741817872460636
[2025-11-22 00:19:42] 2025-11-21 23:18:43,878 | INFO     | current chi2=14.741817872460636 (change=25.09333709968423 %)
[2025-11-22 00:19:42] 2025-11-21 23:18:43,880 | INFO     | sum of square deviations: 1123705833746.8584
[2025-11-22 00:19:42] 2025-11-21 23:18:43,948 | INFO     | sum of deviations: 3474384122158.3774
[2025-11-22 00:19:42] 2025-11-21 23:18:43,948 | INFO     | mean x: 1763720260.8157551
[2025-11-22 00:19:42] 2025-11-21 23:18:43,948 | INFO     | mean y: 2880164.6126302085
[2025-11-22 00:19:42] 2025-11-21 23:18:43,948 | INFO     | intersect: -5450363456.695948
[2025-11-22 00:19:42] 2025-11-21 23:18:43,950 | INFO     | chi2: 11.26458294369348
[2025-11-22 00:19:42] 2025-11-21 23:18:43,950 | INFO     | current chi2=11.26458294369348 (change=23.587558595897594 %)
[2025-11-22 00:19:42] 2025-11-21 23:18:43,950 | INFO     | left removable region: 20
[2025-11-22 00:19:42] 2025-11-21 23:18:43,953 | INFO     | sum of square deviations: 1088954288906.184
[2025-11-22 00:19:42] 2025-11-21 23:18:44,015 | INFO     | sum of deviations: 3382790357802.9614
[2025-11-22 00:19:42] 2025-11-21 23:18:44,015 | INFO     | mean x: 1763720382.8282895
[2025-11-22 00:19:42] 2025-11-21 23:18:44,015 | INFO     | mean y: 2899103.0381578947
[2025-11-22 00:19:42] 2025-11-21 23:18:44,016 | INFO     | intersect: -5476023534.64668
[2025-11-22 00:19:42] 2025-11-21 23:18:44,017 | INFO     | chi2: 4.036813105131669
[2025-11-22 00:19:42] 2025-11-21 23:18:44,018 | INFO     | current memory leak: 3.11 B/s (using 1520 data points, chi2=4.04)
[2025-11-22 00:19:42] 2025-11-21 23:18:44,020 | INFO     | could have reported an average CPU frequency of 1999 MHz (52 samples)
[2025-11-22 00:19:42] 2025-11-21 23:18:44,021 | INFO     | ..............................
[2025-11-22 00:19:42] 2025-11-21 23:18:44,021 | INFO     | . Timing measurements:
[2025-11-22 00:19:42] 2025-11-21 23:18:44,021 | INFO     | . get job = 0 s
[2025-11-22 00:19:42] 2025-11-21 23:18:44,021 | INFO     | . initial setup = 9 s
[2025-11-22 00:19:42] 2025-11-21 23:18:44,021 | INFO     | . payload setup = 158 s
[2025-11-22 00:19:42] 2025-11-21 23:18:44,021 | INFO     | . stage-in = 0 s
[2025-11-22 00:19:42] 2025-11-21 23:18:44,021 | INFO     | . payload execution = 94411 s
[2025-11-22 00:19:42] 2025-11-21 23:18:44,021 | INFO     | . stage-out = 5 s
[2025-11-22 00:19:42] 2025-11-21 23:18:44,021 | INFO     | . log creation = 1 s
[2025-11-22 00:19:42] 2025-11-21 23:18:44,021 | INFO     | ..............................
[2025-11-22 00:19:42] 2025-11-21 23:18:44,371 | INFO     | 
[2025-11-22 00:19:42] 2025-11-21 23:18:44,372 | INFO     | job summary report
[2025-11-22 00:19:42] 2025-11-21 23:18:44,372 | INFO     | --------------------------------------------------
[2025-11-22 00:19:42] 2025-11-21 23:18:44,372 | INFO     | PanDA job id: 6891572609
[2025-11-22 00:19:42] 2025-11-21 23:18:44,372 | INFO     | task id: 47493068
[2025-11-22 00:19:42] 2025-11-21 23:18:44,372 | INFO     | errors: (none)
[2025-11-22 00:19:42] 2025-11-21 23:18:44,373 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-22 00:19:42] 2025-11-21 23:18:44,373 | INFO     | pilot state: finished 
[2025-11-22 00:19:42] 2025-11-21 23:18:44,373 | INFO     | transexitcode: 0
[2025-11-22 00:19:42] 2025-11-21 23:18:44,373 | INFO     | exeerrorcode: 0
[2025-11-22 00:19:42] 2025-11-21 23:18:44,373 | INFO     | exeerrordiag: 
[2025-11-22 00:19:42] 2025-11-21 23:18:44,373 | INFO     | exitcode: 0
[2025-11-22 00:19:42] 2025-11-21 23:18:44,373 | INFO     | exitmsg: OK
[2025-11-22 00:19:42] 2025-11-21 23:18:44,373 | INFO     | cpuconsumptiontime: 349423 s
[2025-11-22 00:19:42] 2025-11-21 23:18:44,373 | INFO     | nevents: 1000
[2025-11-22 00:19:42] 2025-11-21 23:18:44,373 | INFO     | neventsw: 0
[2025-11-22 00:19:42] 2025-11-21 23:18:44,373 | INFO     | pid: 7307
[2025-11-22 00:19:42] 2025-11-21 23:18:44,373 | INFO     | pgrp: 7307
[2025-11-22 00:19:42] 2025-11-21 23:18:44,374 | INFO     | corecount: 8
[2025-11-22 00:19:42] 2025-11-21 23:18:44,374 | INFO     | event service: False
[2025-11-22 00:19:42] 2025-11-21 23:18:44,374 | INFO     | sizes: {0: 2298518, 1: 2298574, 2: 2298801, 13: 2298801, 23: 2298857, 34: 2298885, 45: 2299041, 56: 2299069, 66: 2299097, 77: 2299125, 88: 2299181, 96: 2299751, 99
[2025-11-22 00:19:42] 2025-11-21 23:18:44,374 | INFO     | --------------------------------------------------
[2025-11-22 00:19:42] 2025-11-21 23:18:44,374 | INFO     | 
[2025-11-22 00:19:42] 2025-11-21 23:18:44,374 | INFO     | executing command: ls -lF /var/lib/boinc/slots/5
[2025-11-22 00:19:42] 2025-11-21 23:18:44,486 | INFO     | time since job start (94798s) is within the limit (172800.0s)
[2025-11-22 00:19:42] 2025-11-21 23:18:44,616 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-22 00:19:42] 2025-11-21 23:18:44,617 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-22 00:19:42] 2025-11-21 23:18:44,617 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-22 00:19:42] 2025-11-21 23:18:44,617 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-22 00:19:42] 2025-11-21 23:18:44,617 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-22 00:19:42] 2025-11-21 23:18:44,617 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-22 00:19:42] 2025-11-21 23:18:44,617 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-22 00:19:42] 2025-11-21 23:18:44,617 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-22 00:19:42] 2025-11-21 23:18:44,617 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-22 00:19:42] 2025-11-21 23:18:44,617 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-22 00:19:42] 2025-11-21 23:18:44,617 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-22 00:19:42] 2025-11-21 23:18:44,618 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-22 00:19:42] 2025-11-21 23:18:44,618 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-22 00:19:42] 2025-11-21 23:18:44,618 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-22 00:19:42] 2025-11-21 23:18:44,618 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-22 00:19:42] 2025-11-21 23:18:44,618 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-22 00:19:42] 2025-11-21 23:18:44,618 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-22 00:19:42] 2025-11-21 23:18:44,618 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-22 00:19:42] 2025-11-21 23:18:44,618 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-22 00:19:42] 2025-11-21 23:18:44,618 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-22 00:19:42] 2025-11-21 23:18:44,619 | INFO     | job 6891572609 has completed (purged errors)
[2025-11-22 00:19:42] 2025-11-21 23:18:44,619 | INFO     | overall cleanup function is called
[2025-11-22 00:19:42] 2025-11-21 23:18:45,637 | INFO     | --- collectZombieJob: --- 10, [7307]
[2025-11-22 00:19:42] 2025-11-21 23:18:45,638 | INFO     | zombie collector waiting for pid 7307
[2025-11-22 00:19:42] 2025-11-21 23:18:45,638 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-22 00:19:42] 2025-11-21 23:18:45,638 | INFO     | collected zombie processes
[2025-11-22 00:19:42] 2025-11-21 23:18:45,638 | INFO     | will attempt to kill all subprocesses of pid=7307
[2025-11-22 00:19:42] 2025-11-21 23:18:45,712 | INFO     | PID=700 has CPU usage=18.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-11-22 00:19:42] 2025-11-21 23:18:45,712 | INFO     | .. there are 9 such processes running
[2025-11-22 00:19:42] 2025-11-21 23:18:45,776 | INFO     | process IDs to be killed: [7307] (in reverse order)
[2025-11-22 00:19:42] 2025-11-21 23:18:45,885 | WARNING  | found no corresponding commands to process id(s)
[2025-11-22 00:19:42] 2025-11-21 23:18:45,886 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-22 00:19:42] 2025-11-21 23:18:45,890 | INFO     | did not find any defunct processes belonging to 7307
[2025-11-22 00:19:42] 2025-11-21 23:18:45,893 | INFO     | did not find any defunct processes belonging to 7307
[2025-11-22 00:19:42] 2025-11-21 23:18:45,895 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-22 00:19:42] 2025-11-21 23:18:45,896 | INFO     | ready for new job
[2025-11-22 00:19:42] 2025-11-21 23:18:45,896 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-22 00:19:42] 2025-11-21 23:18:45,903 | INFO     | ***************************************
[2025-11-22 00:19:42] 2025-11-21 23:18:45,903 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-22 00:19:42] 2025-11-21 23:18:45,903 | INFO     | ***************************************
[2025-11-22 00:19:42] 2025-11-21 23:18:45,904 | INFO     | 
[2025-11-22 00:19:42] 2025-11-21 23:18:45,904 | INFO     | pilot is running in a VM
[2025-11-22 00:19:42] 2025-11-21 23:18:45,904 | INFO     | architecture information:
[2025-11-22 00:19:42] 2025-11-21 23:18:45,905 | INFO     | executing command: cat /etc/os-release
[2025-11-22 00:19:42] 2025-11-21 23:18:45,943 | INFO     | cat /etc/os-release:
[2025-11-22 00:19:42] NAME="CentOS Linux"
[2025-11-22 00:19:42] VERSION="7 (Core)"
[2025-11-22 00:19:42] ID="centos"
[2025-11-22 00:19:42] ID_LIKE="rhel fedora"
[2025-11-22 00:19:42] VERSION_ID="7"
[2025-11-22 00:19:42] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-22 00:19:42] ANSI_COLOR="0;31"
[2025-11-22 00:19:42] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-22 00:19:42] HOME_URL="https://www.centos.org/"
[2025-11-22 00:19:42] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-22 00:19:42] 
[2025-11-22 00:19:42] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-22 00:19:42] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-22 00:19:42] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-22 00:19:42] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-22 00:19:42] 
[2025-11-22 00:19:42] 2025-11-21 23:18:45,943 | INFO     | ***************************************
[2025-11-22 00:19:42] 2025-11-21 23:18:46,447 | INFO     | executing command: df -mP /var/lib/boinc/slots/5
[2025-11-22 00:19:42] 2025-11-21 23:18:46,501 | INFO     | sufficient remaining disk space (495205744640 B)
[2025-11-22 00:19:42] 2025-11-21 23:18:46,501 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-22 00:19:42] 2025-11-21 23:18:46,502 | INFO     | current server update state: UPDATING_FINAL
[2025-11-22 00:19:42] 2025-11-21 23:18:46,502 | INFO     | update_server=False
[2025-11-22 00:19:42] 2025-11-21 23:18:46,502 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-22 00:19:42] 2025-11-21 23:18:46,502 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-22 00:19:42] 2025-11-21 23:18:46,503 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-11-22 00:19:42] 2025-11-21 23:18:46,504 | INFO     | found 0 job(s) in 20 queues
[2025-11-22 00:19:42] 2025-11-21 23:18:46,504 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-22 00:19:42] 2025-11-21 23:18:46,504 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-22 00:19:42] 2025-11-21 23:18:46,863 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-22 00:19:42] 2025-11-21 23:18:46,864 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-22 00:19:42] 2025-11-21 23:18:46,864 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-22 00:19:42] 2025-11-21 23:18:46,864 | INFO     | will abort loop
[2025-11-22 00:19:42] 2025-11-21 23:18:47,030 | INFO     | all data control threads have been joined
[2025-11-22 00:19:42] 2025-11-21 23:18:47,488 | INFO     | all payload control threads have been joined
[2025-11-22 00:19:42] 2025-11-21 23:18:47,509 | INFO     | [job] retrieve thread has finished
[2025-11-22 00:19:42] 2025-11-21 23:18:47,539 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-22 00:19:42] 2025-11-21 23:18:47,639 | INFO     | [job] create_data_payload thread has finished
[2025-11-22 00:19:42] 2025-11-21 23:18:47,694 | INFO     | [data] copytool_in thread has finished
[2025-11-22 00:19:42] 2025-11-21 23:18:47,772 | INFO     | all job control threads have been joined
[2025-11-22 00:19:42] 2025-11-21 23:18:47,804 | INFO     | [job] validate thread has finished
[2025-11-22 00:19:42] 2025-11-21 23:18:47,853 | INFO     | [payload] failed_post thread has finished
[2025-11-22 00:19:42] 2025-11-21 23:18:47,869 | INFO     | [job] job monitor thread has finished
[2025-11-22 00:19:42] 2025-11-21 23:18:48,036 | INFO     | [data] control thread has finished
[2025-11-22 00:19:42] 2025-11-21 23:18:48,062 | INFO     | [payload] execute_payloads thread has finished
[2025-11-22 00:19:42] 2025-11-21 23:18:48,091 | INFO     | [payload] validate_post thread has finished
[2025-11-22 00:19:42] 2025-11-21 23:18:48,442 | INFO     | [payload] validate_pre thread has finished
[2025-11-22 00:19:42] 2025-11-21 23:18:48,494 | INFO     | [payload] control thread has finished
[2025-11-22 00:19:42] 2025-11-21 23:18:48,509 | INFO     | [data] copytool_out thread has finished
[2025-11-22 00:19:42] 2025-11-21 23:18:48,649 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-22 00:19:42] 2025-11-21 23:18:48,778 | INFO     | [job] control thread has finished
[2025-11-22 00:19:42] 2025-11-21 23:18:49,160 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-22 00:19:42] 2025-11-21 23:18:50,166 | INFO     | [job] queue monitor thread has finished
[2025-11-22 00:19:42] 2025-11-21 23:18:51,548 | INFO     | [data] queue_monitor thread has finished
[2025-11-22 00:19:42] 2025-11-21 23:19:32,066 | INFO     | [monitor] cgroup control has ended
[2025-11-22 00:19:42] 2025-11-21 23:19:33,671 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140521751873344)>', '<ExcThread(monitor, started 140521305523968)>']
[2025-11-22 00:19:42] 2025-11-21 23:19:33,783 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-22 00:19:42] 2025-11-21 23:19:33,784 | INFO     | [monitor] control thread has ended
[2025-11-22 00:19:42] 2025-11-21 23:19:38,697 | INFO     | all workflow threads have been joined
[2025-11-22 00:19:42] 2025-11-21 23:19:38,698 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-22 00:19:42] 2025-11-21 23:19:38,698 | INFO     | traces error code: 0
[2025-11-22 00:19:42] 2025-11-21 23:19:38,698 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-22 00:19:42] 2025-11-21 23:19:39,004 [wrapper] ==== pilot stdout END ====
[2025-11-22 00:19:42] 2025-11-21 23:19:39,045 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-22 00:19:42] 2025-11-21 23:19:39,109 [wrapper] pilotpid: 700
[2025-11-22 00:19:42] 2025-11-21 23:19:39,176 [wrapper] Pilot exit status: 0
[2025-11-22 00:19:42] 2025-11-21 23:19:39,576 [wrapper] pandaids: 6891572609
[2025-11-22 00:19:42] 2025-11-21 23:19:40,364 [wrapper] cleanup supervisor_pilot 18800 701
[2025-11-22 00:19:42] 2025-11-21 23:19:40,468 [wrapper] Test setup, not cleaning
[2025-11-22 00:19:42] 2025-11-21 23:19:40,573 [wrapper] apfmon messages muted
[2025-11-22 00:19:42] 2025-11-21 23:19:40,678 [wrapper] ==== wrapper stdout END ====
[2025-11-22 00:19:42] 2025-11-21 23:19:40,762 [wrapper] ==== wrapper stderr END ====
[2025-11-22 00:19:42]  *** Error codes and diagnostics ***
[2025-11-22 00:19:42]     "exeErrorCode": 0,
[2025-11-22 00:19:42]     "exeErrorDiag": "",
[2025-11-22 00:19:42]     "pilotErrorCode": 0,
[2025-11-22 00:19:42]     "pilotErrorDiag": "",
[2025-11-22 00:19:42]  *** Listing of results directory ***
[2025-11-22 00:19:42] total 1354124
[2025-11-22 00:19:42] -rwx------. 1 boinc boinc     36292 Nov 18 17:24 runpilot2-wrapper.sh
[2025-11-22 00:19:42] -rw-r--r--. 1 boinc boinc      5112 Nov 18 17:24 queuedata.json
[2025-11-22 00:19:42] -rw-r--r--. 1 boinc boinc    576529 Nov 18 17:24 pilot3.tar.gz
[2025-11-22 00:19:42] -rw-r--r--. 1 boinc boinc       100 Nov 20 21:54 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-22 00:19:42] -rwxr-xr-x. 1 boinc boinc      7986 Nov 20 21:54 run_atlas
[2025-11-22 00:19:42] -rw-r--r--. 1 boinc boinc       105 Nov 20 21:54 job.xml
[2025-11-22 00:19:42] -rw-r--r--. 2 boinc boinc 410808741 Nov 20 21:54 EVNT.47493065._000339.pool.root.1
[2025-11-22 00:19:42] -rw-r--r--. 2 boinc boinc    590098 Nov 20 21:54 input.tar.gz
[2025-11-22 00:19:42] -rw-r--r--. 1 boinc boinc      6390 Nov 20 21:54 init_data.xml
[2025-11-22 00:19:42] -rw-r--r--. 2 boinc boinc     15120 Nov 20 21:54 start_atlas.sh
[2025-11-22 00:19:42] drwxrwx--x. 2 boinc boinc        68 Nov 20 21:54 shared
[2025-11-22 00:19:42] -rw-r--r--. 1 boinc boinc         0 Nov 20 21:54 boinc_lockfile
[2025-11-22 00:19:42] -rw-r--r--. 1 boinc boinc      2772 Nov 20 21:54 pandaJob.out
[2025-11-22 00:19:42] -rw-------. 1 boinc boinc    989440 Nov 20 21:58 agis_schedconf.cvmfs.json
[2025-11-22 00:19:42] drwx------. 5 boinc boinc      4096 Nov 20 21:58 pilot3
[2025-11-22 00:19:42] -rw-r--r--. 1 boinc boinc       533 Nov 21 23:59 boinc_task_state.xml
[2025-11-22 00:19:42] -rw-------. 1 boinc boinc 941477832 Nov 22 00:17 HITS.47493068._003390.pool.root.1
[2025-11-22 00:19:42] -rw-------. 1 boinc boinc        95 Nov 22 00:18 pilot_heartbeat.json
[2025-11-22 00:19:42] -rw-------. 1 boinc boinc      1032 Nov 22 00:18 memory_monitor_summary.json
[2025-11-22 00:19:42] -rw-------. 1 boinc boinc   1526164 Nov 22 00:18 agis_ddmendpoints.agis.ALL.json
[2025-11-22 00:19:42] -rw-------. 1 boinc boinc   2602331 Nov 22 00:18 log.47493068._003390.job.log.tgz.1
[2025-11-22 00:19:42] -rw-------. 1 boinc boinc      7944 Nov 22 00:18 heartbeat.json
[2025-11-22 00:19:42] -rw-r--r--. 1 boinc boinc      8192 Nov 22 00:19 boinc_mmap_file
[2025-11-22 00:19:42] -rw-r--r--. 1 boinc boinc        29 Nov 22 00:19 wrapper_checkpoint.txt
[2025-11-22 00:19:42] -rw-------. 1 boinc boinc      4801 Nov 22 00:19 pilotlog.txt
[2025-11-22 00:19:42] -rw-------. 1 boinc boinc  12610776 Nov 22 00:19 log.47493068._003390.job.log.1
[2025-11-22 00:19:42] -rw-------. 1 boinc boinc       353 Nov 22 00:19 output.list
[2025-11-22 00:19:42] -rw-r--r--. 1 boinc boinc       620 Nov 22 00:19 runtime_log
[2025-11-22 00:19:42] -rw-------. 1 boinc boinc  15237120 Nov 22 00:19 result.tar.gz
[2025-11-22 00:19:42] -rw-r--r--. 1 boinc boinc      8703 Nov 22 00:19 runtime_log.err
[2025-11-22 00:19:42] -rw-------. 1 boinc boinc       662 Nov 22 00:19 0EJLDmdgdf8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmITFKDm9CfOKn.diag
[2025-11-22 00:19:42] -rw-r--r--. 1 boinc boinc     21215 Nov 22 00:19 stderr.txt
[2025-11-22 00:19:42] HITS file was successfully produced:
[2025-11-22 00:19:42] -rw-------. 1 boinc boinc 941477832 Nov 22 00:17 shared/HITS.pool.root.1
[2025-11-22 00:19:42]  *** Contents of shared directory: ***
[2025-11-22 00:19:42] total 1336072
[2025-11-22 00:19:42] -rw-r--r--. 2 boinc boinc 410808741 Nov 20 21:54 ATLAS.root_0
[2025-11-22 00:19:42] -rw-r--r--. 2 boinc boinc    590098 Nov 20 21:54 input.tar.gz
[2025-11-22 00:19:42] -rw-r--r--. 2 boinc boinc     15120 Nov 20 21:54 start_atlas.sh
[2025-11-22 00:19:42] -rw-------. 1 boinc boinc 941477832 Nov 22 00:17 HITS.pool.root.1
[2025-11-22 00:19:42] -rw-------. 1 boinc boinc  15237120 Nov 22 00:19 result.tar.gz
00:19:43 (29332): run_atlas exited; CPU time 350019.784004
00:19:43 (29332): called boinc_finish(0)

</stderr_txt>
]]>

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