Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
21:27:09 (5785): wrapper (7.7.26015): starting
21:27:09 (5785): wrapper: running run_atlas (--nthreads 8)
[2025-11-20 21:27:09] Arguments: --nthreads 8
[2025-11-20 21:27:09] Threads: 8
[2025-11-20 21:27:09] Checking for CVMFS
[2025-11-20 21:27:10] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-20 21:27:11] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-20 21:27:11] Running cvmfs_config stat atlas.cern.ch
[2025-11-20 21:27:12] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-20 21:27:12] 2.11.2.0 25006 277035 145172 153088 0 305 17961117 25165824 3833 130560 2 134348229 99.871 77363518 3117 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-11-20 21:27:12] CVMFS is ok
[2025-11-20 21:27:12] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-20 21:27:12] Checking for apptainer binary...
[2025-11-20 21:27:12] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-20 21:27:12] Running /usr/bin/apptainer --version
[2025-11-20 21:27:12] apptainer version 1.3.2-1.el7
[2025-11-20 21:27:12] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-20 21:27:18] cg-vwn386.simple-grid.lan
[2025-11-20 21:27:18] apptainer works
[2025-11-20 21:27:18] Set ATHENA_PROC_NUMBER=8
[2025-11-20 21:27:18] Set ATHENA_CORE_NUMBER=8
[2025-11-20 21:27:18] Starting ATLAS job with PandaID=6891572083
[2025-11-20 21:27:18] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/16 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-21 22:28:37]  *** The last 200 lines of the pilot log: ***
[2025-11-21 22:28:37] 2025-11-21 21:27:59,031 | INFO     | sum of deviations: 3213280897089.8394
[2025-11-21 22:28:37] 2025-11-21 21:27:59,032 | INFO     | mean x: 1763715631.9054422
[2025-11-21 22:28:37] 2025-11-21 21:27:59,032 | INFO     | mean y: 2883983.6823129253
[2025-11-21 22:28:37] 2025-11-21 21:27:59,032 | INFO     | intersect: -5750821083.679978
[2025-11-21 22:28:37] 2025-11-21 21:27:59,034 | INFO     | chi2: 7.541228146350615
[2025-11-21 22:28:37] 2025-11-21 21:27:59,036 | INFO     | sum of square deviations: 974968991170.4464
[2025-11-21 22:28:37] 2025-11-21 21:27:59,094 | INFO     | sum of deviations: 3718658962862.4497
[2025-11-21 22:28:37] 2025-11-21 21:27:59,095 | INFO     | mean x: 1763715479.410239
[2025-11-21 22:28:37] 2025-11-21 21:27:59,095 | INFO     | mean y: 2891677.7829351537
[2025-11-21 22:28:37] 2025-11-21 21:27:59,095 | INFO     | intersect: -6724149320.28459
[2025-11-21 22:28:37] 2025-11-21 21:27:59,097 | INFO     | chi2: 4.304495424213174
[2025-11-21 22:28:37] 2025-11-21 21:27:59,097 | INFO     | current chi2=4.304495424213174 (change=42.920498615385014 %)
[2025-11-21 22:28:37] 2025-11-21 21:27:59,099 | INFO     | sum of square deviations: 965021025455.4669
[2025-11-21 22:28:37] 2025-11-21 21:27:59,157 | INFO     | sum of deviations: 3989072126785.527
[2025-11-21 22:28:37] 2025-11-21 21:27:59,157 | INFO     | mean x: 1763715326.9150684
[2025-11-21 22:28:37] 2025-11-21 21:27:59,157 | INFO     | mean y: 2895819.1171232876
[2025-11-21 22:28:37] 2025-11-21 21:27:59,158 | INFO     | intersect: -7287709737.234037
[2025-11-21 22:28:37] 2025-11-21 21:27:59,159 | INFO     | chi2: 3.0558575328773743
[2025-11-21 22:28:37] 2025-11-21 21:27:59,160 | INFO     | current chi2=3.0558575328773743 (change=29.007764401655518 %)
[2025-11-21 22:28:37] 2025-11-21 21:27:59,162 | INFO     | sum of square deviations: 955140523185.6042
[2025-11-21 22:28:37] 2025-11-21 21:27:59,218 | INFO     | sum of deviations: 3999929557638.961
[2025-11-21 22:28:37] 2025-11-21 21:27:59,219 | INFO     | mean x: 1763715174.4164948
[2025-11-21 22:28:37] 2025-11-21 21:27:59,220 | INFO     | mean y: 2895985.526460481
[2025-11-21 22:28:37] 2025-11-21 21:27:59,220 | INFO     | intersect: -7383175787.32199
[2025-11-21 22:28:37] 2025-11-21 21:27:59,222 | INFO     | chi2: 3.0086227690681264
[2025-11-21 22:28:37] 2025-11-21 21:27:59,222 | INFO     | current chi2=3.0086227690681264 (change=1.545712236289102 %)
[2025-11-21 22:28:37] 2025-11-21 21:27:59,222 | INFO     | right removable region: 1454
[2025-11-21 22:28:37] 2025-11-21 21:27:59,224 | INFO     | sum of square deviations: 974967730910.4475
[2025-11-21 22:28:37] 2025-11-21 21:27:59,286 | INFO     | sum of deviations: 2745065271528.934
[2025-11-21 22:28:37] 2025-11-21 21:27:59,286 | INFO     | mean x: 1763715784.410239
[2025-11-21 22:28:37] 2025-11-21 21:27:59,286 | INFO     | mean y: 2891108.2313993173
[2025-11-21 22:28:37] 2025-11-21 21:27:59,286 | INFO     | intersect: -4962929600.6353855
[2025-11-21 22:28:37] 2025-11-21 21:27:59,288 | INFO     | chi2: 4.830398232829921
[2025-11-21 22:28:37] 2025-11-21 21:27:59,288 | INFO     | current chi2=4.830398232829921 (change=35.946796210276844 %)
[2025-11-21 22:28:37] 2025-11-21 21:27:59,290 | INFO     | sum of square deviations: 965019130741.2458
[2025-11-21 22:28:37] 2025-11-21 21:27:59,348 | INFO     | sum of deviations: 2638496708320.933
[2025-11-21 22:28:37] 2025-11-21 21:27:59,348 | INFO     | mean x: 1763715936.910274
[2025-11-21 22:28:37] 2025-11-21 21:27:59,348 | INFO     | mean y: 2892741.617808219
[2025-11-21 22:28:37] 2025-11-21 21:27:59,349 | INFO     | intersect: -4819352274.785607
[2025-11-21 22:28:37] 2025-11-21 21:27:59,350 | INFO     | chi2: 4.756066532908693
[2025-11-21 22:28:37] 2025-11-21 21:27:59,351 | INFO     | current chi2=4.756066532908693 (change=1.5388317140402878 %)
[2025-11-21 22:28:37] 2025-11-21 21:27:59,351 | INFO     | left removable region: 20
[2025-11-21 22:28:37] 2025-11-21 21:27:59,353 | INFO     | sum of square deviations: 914377677446.6173
[2025-11-21 22:28:37] 2025-11-21 21:27:59,411 | INFO     | sum of deviations: 3257902597365.046
[2025-11-21 22:28:37] 2025-11-21 21:27:59,411 | INFO     | mean x: 1763715753.9191074
[2025-11-21 22:28:37] 2025-11-21 21:27:59,412 | INFO     | mean y: 2907396.3451882843
[2025-11-21 22:28:37] 2025-11-21 21:27:59,412 | INFO     | intersect: -6281163483.154351
[2025-11-21 22:28:37] 2025-11-21 21:27:59,413 | INFO     | chi2: 0.14073265083711
[2025-11-21 22:28:37] 2025-11-21 21:27:59,414 | INFO     | current memory leak: 3.56 B/s (using 1434 data points, chi2=0.14)
[2025-11-21 22:28:37] 2025-11-21 21:27:59,416 | INFO     | could have reported an average CPU frequency of 1999 MHz (50 samples)
[2025-11-21 22:28:37] 2025-11-21 21:27:59,416 | INFO     | ..............................
[2025-11-21 22:28:37] 2025-11-21 21:27:59,416 | INFO     | . Timing measurements:
[2025-11-21 22:28:37] 2025-11-21 21:27:59,416 | INFO     | . get job = 0 s
[2025-11-21 22:28:37] 2025-11-21 21:27:59,416 | INFO     | . initial setup = 5 s
[2025-11-21 22:28:37] 2025-11-21 21:27:59,416 | INFO     | . payload setup = 12 s
[2025-11-21 22:28:37] 2025-11-21 21:27:59,417 | INFO     | . stage-in = 0 s
[2025-11-21 22:28:37] 2025-11-21 21:27:59,417 | INFO     | . payload execution = 89649 s
[2025-11-21 22:28:37] 2025-11-21 21:27:59,417 | INFO     | . stage-out = 4 s
[2025-11-21 22:28:37] 2025-11-21 21:27:59,417 | INFO     | . log creation = 1 s
[2025-11-21 22:28:37] 2025-11-21 21:27:59,417 | INFO     | ..............................
[2025-11-21 22:28:37] 2025-11-21 21:27:59,546 | INFO     | time since job start (89828s) is within the limit (172800.0s)
[2025-11-21 22:28:37] 2025-11-21 21:27:59,933 | INFO     | 
[2025-11-21 22:28:37] 2025-11-21 21:27:59,933 | INFO     | job summary report
[2025-11-21 22:28:37] 2025-11-21 21:27:59,933 | INFO     | --------------------------------------------------
[2025-11-21 22:28:37] 2025-11-21 21:27:59,933 | INFO     | PanDA job id: 6891572083
[2025-11-21 22:28:37] 2025-11-21 21:27:59,933 | INFO     | task id: 47493068
[2025-11-21 22:28:37] 2025-11-21 21:27:59,934 | INFO     | errors: (none)
[2025-11-21 22:28:37] 2025-11-21 21:27:59,934 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-21 22:28:37] 2025-11-21 21:27:59,934 | INFO     | pilot state: finished 
[2025-11-21 22:28:37] 2025-11-21 21:27:59,934 | INFO     | transexitcode: 0
[2025-11-21 22:28:37] 2025-11-21 21:27:59,934 | INFO     | exeerrorcode: 0
[2025-11-21 22:28:37] 2025-11-21 21:27:59,934 | INFO     | exeerrordiag: 
[2025-11-21 22:28:37] 2025-11-21 21:27:59,934 | INFO     | exitcode: 0
[2025-11-21 22:28:37] 2025-11-21 21:27:59,934 | INFO     | exitmsg: OK
[2025-11-21 22:28:37] 2025-11-21 21:27:59,934 | INFO     | cpuconsumptiontime: 339195 s
[2025-11-21 22:28:37] 2025-11-21 21:27:59,934 | INFO     | nevents: 1000
[2025-11-21 22:28:37] 2025-11-21 21:27:59,934 | INFO     | neventsw: 0
[2025-11-21 22:28:37] 2025-11-21 21:27:59,934 | INFO     | pid: 16154
[2025-11-21 22:28:37] 2025-11-21 21:27:59,935 | INFO     | pgrp: 16154
[2025-11-21 22:28:37] 2025-11-21 21:27:59,935 | INFO     | corecount: 8
[2025-11-21 22:28:37] 2025-11-21 21:27:59,935 | INFO     | event service: False
[2025-11-21 22:28:37] 2025-11-21 21:27:59,935 | INFO     | sizes: {0: 2297968, 1: 2298654, 2: 2298853, 13: 2298853, 23: 2298909, 34: 2298937, 45: 2299093, 56: 2299121, 67: 2299149, 77: 2299177, 88: 2299233, 99: 2299541, 10
[2025-11-21 22:28:37] 2025-11-21 21:27:59,935 | INFO     | --------------------------------------------------
[2025-11-21 22:28:37] 2025-11-21 21:27:59,935 | INFO     | 
[2025-11-21 22:28:37] 2025-11-21 21:27:59,935 | INFO     | executing command: ls -lF /var/lib/boinc/slots/16
[2025-11-21 22:28:37] 2025-11-21 21:27:59,976 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-21 22:28:37] 2025-11-21 21:27:59,977 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-21 22:28:37] 2025-11-21 21:27:59,977 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-21 22:28:37] 2025-11-21 21:27:59,977 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-21 22:28:37] 2025-11-21 21:27:59,977 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-21 22:28:37] 2025-11-21 21:27:59,977 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-21 22:28:37] 2025-11-21 21:27:59,977 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-21 22:28:37] 2025-11-21 21:27:59,977 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-21 22:28:37] 2025-11-21 21:27:59,977 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-21 22:28:37] 2025-11-21 21:27:59,978 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-21 22:28:37] 2025-11-21 21:27:59,978 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-21 22:28:37] 2025-11-21 21:27:59,978 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-21 22:28:37] 2025-11-21 21:27:59,978 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-21 22:28:37] 2025-11-21 21:27:59,978 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-21 22:28:37] 2025-11-21 21:27:59,978 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-21 22:28:37] 2025-11-21 21:27:59,978 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-21 22:28:37] 2025-11-21 21:27:59,978 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-21 22:28:37] 2025-11-21 21:27:59,978 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-21 22:28:37] 2025-11-21 21:27:59,978 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-21 22:28:37] 2025-11-21 21:27:59,978 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-21 22:28:37] 2025-11-21 21:27:59,979 | INFO     | job 6891572083 has completed (purged errors)
[2025-11-21 22:28:37] 2025-11-21 21:27:59,979 | INFO     | overall cleanup function is called
[2025-11-21 22:28:37] 2025-11-21 21:28:00,998 | INFO     | --- collectZombieJob: --- 10, [16154]
[2025-11-21 22:28:37] 2025-11-21 21:28:00,998 | INFO     | zombie collector waiting for pid 16154
[2025-11-21 22:28:37] 2025-11-21 21:28:00,998 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-21 22:28:37] 2025-11-21 21:28:00,998 | INFO     | collected zombie processes
[2025-11-21 22:28:37] 2025-11-21 21:28:00,998 | INFO     | will attempt to kill all subprocesses of pid=16154
[2025-11-21 22:28:37] 2025-11-21 21:28:01,109 | INFO     | process IDs to be killed: [16154] (in reverse order)
[2025-11-21 22:28:37] 2025-11-21 21:28:01,372 | WARNING  | found no corresponding commands to process id(s)
[2025-11-21 22:28:37] 2025-11-21 21:28:01,372 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-21 22:28:37] 2025-11-21 21:28:01,376 | INFO     | did not find any defunct processes belonging to 16154
[2025-11-21 22:28:37] 2025-11-21 21:28:01,380 | INFO     | did not find any defunct processes belonging to 16154
[2025-11-21 22:28:37] 2025-11-21 21:28:01,381 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-21 22:28:37] 2025-11-21 21:28:01,382 | INFO     | ready for new job
[2025-11-21 22:28:37] 2025-11-21 21:28:01,382 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-21 22:28:37] 2025-11-21 21:28:01,389 | INFO     | ***************************************
[2025-11-21 22:28:37] 2025-11-21 21:28:01,389 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-21 22:28:37] 2025-11-21 21:28:01,389 | INFO     | ***************************************
[2025-11-21 22:28:37] 2025-11-21 21:28:01,389 | INFO     | 
[2025-11-21 22:28:37] 2025-11-21 21:28:01,390 | INFO     | pilot is running in a VM
[2025-11-21 22:28:37] 2025-11-21 21:28:01,390 | INFO     | architecture information:
[2025-11-21 22:28:37] 2025-11-21 21:28:01,390 | INFO     | executing command: cat /etc/os-release
[2025-11-21 22:28:37] 2025-11-21 21:28:01,425 | INFO     | cat /etc/os-release:
[2025-11-21 22:28:37] NAME="CentOS Linux"
[2025-11-21 22:28:37] VERSION="7 (Core)"
[2025-11-21 22:28:37] ID="centos"
[2025-11-21 22:28:37] ID_LIKE="rhel fedora"
[2025-11-21 22:28:37] VERSION_ID="7"
[2025-11-21 22:28:37] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-21 22:28:37] ANSI_COLOR="0;31"
[2025-11-21 22:28:37] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-21 22:28:37] HOME_URL="https://www.centos.org/"
[2025-11-21 22:28:37] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-21 22:28:37] 
[2025-11-21 22:28:37] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-21 22:28:37] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-21 22:28:37] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-21 22:28:37] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-21 22:28:37] 
[2025-11-21 22:28:37] 2025-11-21 21:28:01,425 | INFO     | ***************************************
[2025-11-21 22:28:37] 2025-11-21 21:28:01,929 | INFO     | executing command: df -mP /var/lib/boinc/slots/16
[2025-11-21 22:28:37] 2025-11-21 21:28:01,976 | INFO     | sufficient remaining disk space (495046361088 B)
[2025-11-21 22:28:37] 2025-11-21 21:28:01,976 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-21 22:28:37] 2025-11-21 21:28:01,977 | INFO     | current server update state: UPDATING_FINAL
[2025-11-21 22:28:37] 2025-11-21 21:28:01,977 | INFO     | update_server=False
[2025-11-21 22:28:37] 2025-11-21 21:28:01,977 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-21 22:28:37] 2025-11-21 21:28:01,978 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-21 22:28:37] 2025-11-21 21:28:02,288 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-21 22:28:37] 2025-11-21 21:28:02,288 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-21 22:28:37] 2025-11-21 21:28:02,288 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-21 22:28:37] 2025-11-21 21:28:02,288 | INFO     | will abort loop
[2025-11-21 22:28:37] 2025-11-21 21:28:02,580 | INFO     | all data control threads have been joined
[2025-11-21 22:28:37] 2025-11-21 21:28:02,727 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-21 22:28:37] 2025-11-21 21:28:02,982 | INFO     | [job] retrieve thread has finished
[2025-11-21 22:28:37] 2025-11-21 21:28:03,057 | INFO     | [payload] validate_pre thread has finished
[2025-11-21 22:28:37] 2025-11-21 21:28:03,294 | INFO     | [job] job monitor thread has finished
[2025-11-21 22:28:37] 2025-11-21 21:28:03,300 | INFO     | all job control threads have been joined
[2025-11-21 22:28:37] 2025-11-21 21:28:03,385 | INFO     | all payload control threads have been joined
[2025-11-21 22:28:37] 2025-11-21 21:28:03,585 | INFO     | [data] control thread has finished
[2025-11-21 22:28:37] 2025-11-21 21:28:03,702 | INFO     | [payload] execute_payloads thread has finished
[2025-11-21 22:28:37] 2025-11-21 21:28:03,703 | INFO     | [job] create_data_payload thread has finished
[2025-11-21 22:28:37] 2025-11-21 21:28:03,835 | INFO     | [payload] validate_post thread has finished
[2025-11-21 22:28:37] 2025-11-21 21:28:03,847 | INFO     | [data] copytool_in thread has finished
[2025-11-21 22:28:37] 2025-11-21 21:28:03,860 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-21 22:28:37] 2025-11-21 21:28:03,985 | INFO     | [data] copytool_out thread has finished
[2025-11-21 22:28:37] 2025-11-21 21:28:04,301 | INFO     | [payload] failed_post thread has finished
[2025-11-21 22:28:37] 2025-11-21 21:28:04,305 | INFO     | [job] control thread has finished
[2025-11-21 22:28:37] 2025-11-21 21:28:04,391 | INFO     | [payload] control thread has finished
[2025-11-21 22:28:37] 2025-11-21 21:28:04,423 | INFO     | [job] validate thread has finished
[2025-11-21 22:28:37] 2025-11-21 21:28:04,558 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-21 22:28:37] 2025-11-21 21:28:05,565 | INFO     | [job] queue monitor thread has finished
[2025-11-21 22:28:37] 2025-11-21 21:28:06,736 | INFO     | [data] queue_monitor thread has finished
[2025-11-21 22:28:37] 2025-11-21 21:28:28,649 | INFO     | [monitor] cgroup control has ended
[2025-11-21 22:28:37] 2025-11-21 21:28:28,918 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139957244331840)>', '<ExcThread(monitor, started 139956676720384)>']
[2025-11-21 22:28:37] 2025-11-21 21:28:32,724 | INFO     | PID=9585 has CPU usage=2.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-11-21 22:28:37] 2025-11-21 21:28:32,725 | INFO     | .. there are 9 such processes running
[2025-11-21 22:28:37] 2025-11-21 21:28:32,726 | INFO     | found 0 job(s) in 20 queues
[2025-11-21 22:28:37] 2025-11-21 21:28:32,726 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-21 22:28:37] 2025-11-21 21:28:32,726 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-21 22:28:37] 2025-11-21 21:28:32,726 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-21 22:28:37] 2025-11-21 21:28:32,726 | INFO     | [monitor] control thread has ended
[2025-11-21 22:28:37] 2025-11-21 21:28:33,945 | INFO     | all workflow threads have been joined
[2025-11-21 22:28:37] 2025-11-21 21:28:33,945 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-21 22:28:37] 2025-11-21 21:28:33,946 | INFO     | traces error code: 0
[2025-11-21 22:28:37] 2025-11-21 21:28:33,946 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-21 22:28:37] 2025-11-21 21:28:34,228 [wrapper] ==== pilot stdout END ====
[2025-11-21 22:28:37] 2025-11-21 21:28:34,288 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-21 22:28:37] 2025-11-21 21:28:34,330 [wrapper] pilotpid: 9585
[2025-11-21 22:28:37] 2025-11-21 21:28:34,397 [wrapper] Pilot exit status: 0
[2025-11-21 22:28:37] 2025-11-21 21:28:34,691 [wrapper] pandaids: 6891572083
[2025-11-21 22:28:37] 2025-11-21 21:28:35,139 [wrapper] cleanup supervisor_pilot 26895 9586
[2025-11-21 22:28:37] 2025-11-21 21:28:35,175 [wrapper] Test setup, not cleaning
[2025-11-21 22:28:37] 2025-11-21 21:28:35,268 [wrapper] apfmon messages muted
[2025-11-21 22:28:37] 2025-11-21 21:28:35,304 [wrapper] ==== wrapper stdout END ====
[2025-11-21 22:28:37] 2025-11-21 21:28:35,395 [wrapper] ==== wrapper stderr END ====
[2025-11-21 22:28:37]  *** Error codes and diagnostics ***
[2025-11-21 22:28:37]     "exeErrorCode": 0,
[2025-11-21 22:28:37]     "exeErrorDiag": "",
[2025-11-21 22:28:37]     "pilotErrorCode": 0,
[2025-11-21 22:28:37]     "pilotErrorDiag": "",
[2025-11-21 22:28:37]  *** Listing of results directory ***
[2025-11-21 22:28:37] total 1335976
[2025-11-21 22:28:37] -rw-r--r--. 1 boinc boinc    576529 Nov 18 16:47 pilot3.tar.gz
[2025-11-21 22:28:37] -rw-r--r--. 1 boinc boinc      5112 Nov 18 17:16 queuedata.json
[2025-11-21 22:28:37] -rwx------. 1 boinc boinc     36292 Nov 18 17:17 runpilot2-wrapper.sh
[2025-11-21 22:28:37] -rw-r--r--. 1 boinc boinc       100 Nov 20 21:27 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-21 22:28:37] -rwxr-xr-x. 1 boinc boinc      7986 Nov 20 21:27 run_atlas
[2025-11-21 22:28:37] -rw-r--r--. 1 boinc boinc       105 Nov 20 21:27 job.xml
[2025-11-21 22:28:37] -rw-r--r--. 1 boinc boinc      6392 Nov 20 21:27 init_data.xml
[2025-11-21 22:28:37] -rw-r--r--. 2 boinc boinc 410848921 Nov 20 21:27 EVNT.47493065._000326.pool.root.1
[2025-11-21 22:28:37] -rw-r--r--. 2 boinc boinc     15120 Nov 20 21:27 start_atlas.sh
[2025-11-21 22:28:37] drwxrwx--x. 2 boinc boinc        68 Nov 20 21:27 shared
[2025-11-21 22:28:37] -rw-r--r--. 2 boinc boinc    590099 Nov 20 21:27 input.tar.gz
[2025-11-21 22:28:37] -rw-r--r--. 1 boinc boinc         0 Nov 20 21:27 boinc_lockfile
[2025-11-21 22:28:37] -rw-r--r--. 1 boinc boinc      2773 Nov 20 21:27 pandaJob.out
[2025-11-21 22:28:37] -rw-------. 1 boinc boinc    989440 Nov 20 21:30 agis_schedconf.cvmfs.json
[2025-11-21 22:28:37] drwx------. 5 boinc boinc      4096 Nov 20 21:30 pilot3
[2025-11-21 22:28:37] -rw-r--r--. 1 boinc boinc       533 Nov 21 22:14 boinc_task_state.xml
[2025-11-21 22:28:37] -rw-------. 1 boinc boinc 924298304 Nov 21 22:26 HITS.47493068._003256.pool.root.1
[2025-11-21 22:28:37] -rw-------. 1 boinc boinc      1034 Nov 21 22:27 memory_monitor_summary.json
[2025-11-21 22:28:37] -rw-------. 1 boinc boinc   1526164 Nov 21 22:27 agis_ddmendpoints.agis.ALL.json
[2025-11-21 22:28:37] -rw-------. 1 boinc boinc   2541487 Nov 21 22:27 log.47493068._003256.job.log.tgz.1
[2025-11-21 22:28:37] -rw-------. 1 boinc boinc      8635 Nov 21 22:27 heartbeat.json
[2025-11-21 22:28:37] -rw-r--r--. 1 boinc boinc      8192 Nov 21 22:28 boinc_mmap_file
[2025-11-21 22:28:37] -rw-r--r--. 1 boinc boinc        29 Nov 21 22:28 wrapper_checkpoint.txt
[2025-11-21 22:28:37] -rw-------. 1 boinc boinc        95 Nov 21 22:28 pilot_heartbeat.json
[2025-11-21 22:28:37] -rw-------. 1 boinc boinc      5070 Nov 21 22:28 pilotlog.txt
[2025-11-21 22:28:37] -rw-------. 1 boinc boinc  11949363 Nov 21 22:28 log.47493068._003256.job.log.1
[2025-11-21 22:28:37] -rw-------. 1 boinc boinc       353 Nov 21 22:28 output.list
[2025-11-21 22:28:37] -rw-r--r--. 1 boinc boinc       620 Nov 21 22:28 runtime_log
[2025-11-21 22:28:37] -rw-------. 1 boinc boinc  14510080 Nov 21 22:28 result.tar.gz
[2025-11-21 22:28:37] -rw-------. 1 boinc boinc       662 Nov 21 22:28 zd1KDmWZdf8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm8SFKDm6yPTjn.diag
[2025-11-21 22:28:37] -rw-r--r--. 1 boinc boinc      8717 Nov 21 22:28 runtime_log.err
[2025-11-21 22:28:37] -rw-r--r--. 1 boinc boinc     20885 Nov 21 22:28 stderr.txt
[2025-11-21 22:28:37] HITS file was successfully produced:
[2025-11-21 22:28:37] -rw-------. 1 boinc boinc 924298304 Nov 21 22:26 shared/HITS.pool.root.1
[2025-11-21 22:28:37]  *** Contents of shared directory: ***
[2025-11-21 22:28:37] total 1318624
[2025-11-21 22:28:37] -rw-r--r--. 2 boinc boinc 410848921 Nov 20 21:27 ATLAS.root_0
[2025-11-21 22:28:37] -rw-r--r--. 2 boinc boinc     15120 Nov 20 21:27 start_atlas.sh
[2025-11-21 22:28:37] -rw-r--r--. 2 boinc boinc    590099 Nov 20 21:27 input.tar.gz
[2025-11-21 22:28:37] -rw-------. 1 boinc boinc 924298304 Nov 21 22:26 HITS.pool.root.1
[2025-11-21 22:28:37] -rw-------. 1 boinc boinc  14510080 Nov 21 22:28 result.tar.gz
22:28:38 (5785): run_atlas exited; CPU time 339640.698131
22:28:38 (5785): called boinc_finish(0)

</stderr_txt>
]]>

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