Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
23:00:46 (6399): wrapper (7.7.26015): starting
23:00:46 (6399): wrapper: running run_atlas (--nthreads 8)
[2025-11-20 23:00:46] Arguments: --nthreads 8
[2025-11-20 23:00:46] Threads: 8
[2025-11-20 23:00:46] Checking for CVMFS
[2025-11-20 23:00:47] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-20 23:00:47] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-20 23:00:47] Running cvmfs_config stat atlas.cern.ch
[2025-11-20 23:00:49] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-20 23:00:49] 2.11.2.0 25230 277150 142072 153088 1 85 22116391 25165824 4632 130560 3 120518152 99.848 84760287 3171 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-11-20 23:00:49] CVMFS is ok
[2025-11-20 23:00:49] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-20 23:00:49] Checking for apptainer binary...
[2025-11-20 23:00:49] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-20 23:00:49] Running /usr/bin/apptainer --version
[2025-11-20 23:00:49] apptainer version 1.3.2-1.el7
[2025-11-20 23:00:49] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-20 23:01:03] cg-vwn359.simple-grid.lan
[2025-11-20 23:01:03] apptainer works
[2025-11-20 23:01:03] Set ATHENA_PROC_NUMBER=8
[2025-11-20 23:01:03] Set ATHENA_CORE_NUMBER=8
[2025-11-20 23:01:03] Starting ATLAS job with PandaID=6891572070
[2025-11-20 23:01:03] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/14 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-22 01:18:12]  *** The last 200 lines of the pilot log: ***
[2025-11-22 01:18:12] 2025-11-22 00:17:29,048 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-22 01:18:12] 2025-11-22 00:17:29,089 | INFO     | fitting pss+swap vs Time
[2025-11-22 01:18:12] 2025-11-22 00:17:29,092 | INFO     | sum of square deviations: 1128099965065.6504
[2025-11-22 01:18:12] 2025-11-22 00:17:29,168 | INFO     | sum of deviations: 3371014615007.9355
[2025-11-22 01:18:12] 2025-11-22 00:17:29,169 | INFO     | mean x: 1763723626.8907673
[2025-11-22 01:18:12] 2025-11-22 00:17:29,169 | INFO     | mean y: 2874376.2912873863
[2025-11-22 01:18:12] 2025-11-22 00:17:29,169 | INFO     | intersect: -5267525683.279299
[2025-11-22 01:18:12] 2025-11-22 00:17:29,171 | INFO     | chi2: 12.286152322329574
[2025-11-22 01:18:12] 2025-11-22 00:17:29,173 | INFO     | sum of square deviations: 1117134076948.447
[2025-11-22 01:18:12] 2025-11-22 00:17:29,250 | INFO     | sum of deviations: 3879963834254.3154
[2025-11-22 01:18:12] 2025-11-22 00:17:29,250 | INFO     | mean x: 1763723474.3953032
[2025-11-22 01:18:12] 2025-11-22 00:17:29,250 | INFO     | mean y: 2881453.12654925
[2025-11-22 01:18:12] 2025-11-22 00:17:29,251 | INFO     | intersect: -6122778336.047476
[2025-11-22 01:18:12] 2025-11-22 00:17:29,252 | INFO     | chi2: 9.159751455428138
[2025-11-22 01:18:12] 2025-11-22 00:17:29,252 | INFO     | current chi2=9.159751455428138 (change=25.44654164200237 %)
[2025-11-22 01:18:12] 2025-11-22 00:17:29,255 | INFO     | sum of square deviations: 1106239492493.6804
[2025-11-22 01:18:12] 2025-11-22 00:17:29,325 | INFO     | sum of deviations: 4459081766202.02
[2025-11-22 01:18:12] 2025-11-22 00:17:29,325 | INFO     | mean x: 1763723321.8998692
[2025-11-22 01:18:12] 2025-11-22 00:17:29,325 | INFO     | mean y: 2889559.1308900523
[2025-11-22 01:18:12] 2025-11-22 00:17:29,325 | INFO     | intersect: -7106408706.455927
[2025-11-22 01:18:12] 2025-11-22 00:17:29,327 | INFO     | chi2: 5.296336050650057
[2025-11-22 01:18:12] 2025-11-22 00:17:29,328 | INFO     | current chi2=5.296336050650057 (change=42.178168518847656 %)
[2025-11-22 01:18:12] 2025-11-22 00:17:29,330 | INFO     | sum of square deviations: 1095415979138.8511
[2025-11-22 01:18:12] 2025-11-22 00:17:29,406 | INFO     | sum of deviations: 4841933521969.3955
[2025-11-22 01:18:12] 2025-11-22 00:17:29,407 | INFO     | mean x: 1763723169.404465
[2025-11-22 01:18:12] 2025-11-22 00:17:29,407 | INFO     | mean y: 2894948.8824688117
[2025-11-22 01:18:12] 2025-11-22 00:17:29,407 | INFO     | intersect: -7793075257.912467
[2025-11-22 01:18:12] 2025-11-22 00:17:29,409 | INFO     | chi2: 3.1303528690476177
[2025-11-22 01:18:12] 2025-11-22 00:17:29,409 | INFO     | current chi2=3.1303528690476177 (change=40.89587897914054 %)
[2025-11-22 01:18:12] 2025-11-22 00:17:29,411 | INFO     | sum of square deviations: 1084663026103.9011
[2025-11-22 01:18:12] 2025-11-22 00:17:29,489 | INFO     | sum of deviations: 4920600071529.987
[2025-11-22 01:18:12] 2025-11-22 00:17:29,489 | INFO     | mean x: 1763723016.9071145
[2025-11-22 01:18:12] 2025-11-22 00:17:29,490 | INFO     | mean y: 2896062.177206851
[2025-11-22 01:18:12] 2025-11-22 00:17:29,490 | INFO     | intersect: -7998276093.866121
[2025-11-22 01:18:12] 2025-11-22 00:17:29,492 | INFO     | chi2: 2.8962385186864865
[2025-11-22 01:18:12] 2025-11-22 00:17:29,492 | INFO     | current chi2=2.8962385186864865 (change=7.478848556532171 %)
[2025-11-22 01:18:12] 2025-11-22 00:17:29,492 | INFO     | right removable region: 1517
[2025-11-22 01:18:12] 2025-11-22 00:17:29,495 | INFO     | sum of square deviations: 1117132772158.448
[2025-11-22 01:18:12] 2025-11-22 00:17:29,561 | INFO     | sum of deviations: 2909560866354.7207
[2025-11-22 01:18:12] 2025-11-22 00:17:29,562 | INFO     | mean x: 1763723779.3953032
[2025-11-22 01:18:12] 2025-11-22 00:17:29,562 | INFO     | mean y: 2880790.29419439
[2025-11-22 01:18:12] 2025-11-22 00:17:29,562 | INFO     | intersect: -4590719733.726575
[2025-11-22 01:18:12] 2025-11-22 00:17:29,564 | INFO     | chi2: 9.939542580157713
[2025-11-22 01:18:12] 2025-11-22 00:17:29,564 | INFO     | current chi2=9.939542580157713 (change=19.099630873914812 %)
[2025-11-22 01:18:12] 2025-11-22 00:17:29,564 | INFO     | left removable region: 10
[2025-11-22 01:18:12] 2025-11-22 00:17:29,567 | INFO     | sum of square deviations: 1061253016593.2759
[2025-11-22 01:18:12] 2025-11-22 00:17:29,639 | INFO     | sum of deviations: 4339475729671.68
[2025-11-22 01:18:12] 2025-11-22 00:17:29,639 | INFO     | mean x: 1763723291.4127405
[2025-11-22 01:18:12] 2025-11-22 00:17:29,639 | INFO     | mean y: 2904203.2561380225
[2025-11-22 01:18:12] 2025-11-22 00:17:29,640 | INFO     | intersect: -7208980519.117741
[2025-11-22 01:18:12] 2025-11-22 00:17:29,642 | INFO     | chi2: 0.44617853246530226
[2025-11-22 01:18:12] 2025-11-22 00:17:29,642 | INFO     | current memory leak: 4.09 B/s (using 1507 data points, chi2=0.45)
[2025-11-22 01:18:12] 2025-11-22 00:17:29,644 | INFO     | could have reported an average CPU frequency of 1999 MHz (52 samples)
[2025-11-22 01:18:12] 2025-11-22 00:17:29,644 | INFO     | ..............................
[2025-11-22 01:18:12] 2025-11-22 00:17:29,645 | INFO     | . Timing measurements:
[2025-11-22 01:18:12] 2025-11-22 00:17:29,645 | INFO     | . get job = 0 s
[2025-11-22 01:18:12] 2025-11-22 00:17:29,645 | INFO     | . initial setup = 11 s
[2025-11-22 01:18:12] 2025-11-22 00:17:29,645 | INFO     | . payload setup = 164 s
[2025-11-22 01:18:12] 2025-11-22 00:17:29,645 | INFO     | . stage-in = 0 s
[2025-11-22 01:18:12] 2025-11-22 00:17:29,645 | INFO     | . payload execution = 93842 s
[2025-11-22 01:18:12] 2025-11-22 00:17:29,645 | INFO     | . stage-out = 6 s
[2025-11-22 01:18:12] 2025-11-22 00:17:29,645 | INFO     | . log creation = 2 s
[2025-11-22 01:18:12] 2025-11-22 00:17:29,645 | INFO     | ..............................
[2025-11-22 01:18:12] 2025-11-22 00:17:29,772 | INFO     | 
[2025-11-22 01:18:12] 2025-11-22 00:17:29,772 | INFO     | job summary report
[2025-11-22 01:18:12] 2025-11-22 00:17:29,772 | INFO     | --------------------------------------------------
[2025-11-22 01:18:12] 2025-11-22 00:17:29,772 | INFO     | PanDA job id: 6891572070
[2025-11-22 01:18:12] 2025-11-22 00:17:29,772 | INFO     | task id: 47493068
[2025-11-22 01:18:12] 2025-11-22 00:17:29,772 | INFO     | errors: (none)
[2025-11-22 01:18:12] 2025-11-22 00:17:29,773 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-22 01:18:12] 2025-11-22 00:17:29,773 | INFO     | pilot state: finished 
[2025-11-22 01:18:12] 2025-11-22 00:17:29,773 | INFO     | transexitcode: 0
[2025-11-22 01:18:12] 2025-11-22 00:17:29,773 | INFO     | exeerrorcode: 0
[2025-11-22 01:18:12] 2025-11-22 00:17:29,773 | INFO     | exeerrordiag: 
[2025-11-22 01:18:12] 2025-11-22 00:17:29,773 | INFO     | exitcode: 0
[2025-11-22 01:18:12] 2025-11-22 00:17:29,773 | INFO     | exitmsg: OK
[2025-11-22 01:18:12] 2025-11-22 00:17:29,773 | INFO     | cpuconsumptiontime: 345740 s
[2025-11-22 01:18:12] 2025-11-22 00:17:29,773 | INFO     | nevents: 1000
[2025-11-22 01:18:12] 2025-11-22 00:17:29,773 | INFO     | neventsw: 0
[2025-11-22 01:18:12] 2025-11-22 00:17:29,774 | INFO     | pid: 16816
[2025-11-22 01:18:12] 2025-11-22 00:17:29,774 | INFO     | pgrp: 16816
[2025-11-22 01:18:12] 2025-11-22 00:17:29,774 | INFO     | corecount: 8
[2025-11-22 01:18:12] 2025-11-22 00:17:29,774 | INFO     | event service: False
[2025-11-22 01:18:12] 2025-11-22 00:17:29,774 | INFO     | sizes: {0: 2297968, 1: 2298570, 2: 2298853, 3: 2298853, 13: 2298881, 24: 2298937, 35: 2299093, 45: 2299121, 56: 2299149, 67: 2299177, 78: 2299205, 89: 2299541, 99:
[2025-11-22 01:18:12] 2025-11-22 00:17:29,774 | INFO     | --------------------------------------------------
[2025-11-22 01:18:12] 2025-11-22 00:17:29,774 | INFO     | 
[2025-11-22 01:18:12] 2025-11-22 00:17:29,774 | INFO     | executing command: ls -lF /var/lib/boinc/slots/14
[2025-11-22 01:18:12] 2025-11-22 00:17:30,153 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-22 01:18:12] 2025-11-22 00:17:30,154 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-22 01:18:12] 2025-11-22 00:17:30,154 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-22 01:18:12] 2025-11-22 00:17:30,154 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-22 01:18:12] 2025-11-22 00:17:30,154 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-22 01:18:12] 2025-11-22 00:17:30,154 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-22 01:18:12] 2025-11-22 00:17:30,154 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-22 01:18:12] 2025-11-22 00:17:30,154 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-22 01:18:12] 2025-11-22 00:17:30,154 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-22 01:18:12] 2025-11-22 00:17:30,154 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-22 01:18:12] 2025-11-22 00:17:30,154 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-22 01:18:12] 2025-11-22 00:17:30,154 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-22 01:18:12] 2025-11-22 00:17:30,155 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-22 01:18:12] 2025-11-22 00:17:30,155 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-22 01:18:12] 2025-11-22 00:17:30,155 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-22 01:18:12] 2025-11-22 00:17:30,155 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-22 01:18:12] 2025-11-22 00:17:30,155 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-22 01:18:12] 2025-11-22 00:17:30,155 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-22 01:18:12] 2025-11-22 00:17:30,155 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-22 01:18:12] 2025-11-22 00:17:30,155 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-22 01:18:12] 2025-11-22 00:17:30,155 | INFO     | job 6891572070 has completed (purged errors)
[2025-11-22 01:18:12] 2025-11-22 00:17:30,155 | INFO     | overall cleanup function is called
[2025-11-22 01:18:12] 2025-11-22 00:17:31,187 | INFO     | --- collectZombieJob: --- 10, [16816]
[2025-11-22 01:18:12] 2025-11-22 00:17:31,188 | INFO     | zombie collector waiting for pid 16816
[2025-11-22 01:18:12] 2025-11-22 00:17:31,188 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-22 01:18:12] 2025-11-22 00:17:31,188 | INFO     | collected zombie processes
[2025-11-22 01:18:12] 2025-11-22 00:17:31,188 | INFO     | will attempt to kill all subprocesses of pid=16816
[2025-11-22 01:18:12] 2025-11-22 00:17:31,318 | INFO     | process IDs to be killed: [16816] (in reverse order)
[2025-11-22 01:18:12] 2025-11-22 00:17:32,307 | WARNING  | found no corresponding commands to process id(s)
[2025-11-22 01:18:12] 2025-11-22 00:17:32,307 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-22 01:18:12] 2025-11-22 00:17:32,311 | INFO     | did not find any defunct processes belonging to 16816
[2025-11-22 01:18:12] 2025-11-22 00:17:32,314 | INFO     | did not find any defunct processes belonging to 16816
[2025-11-22 01:18:12] 2025-11-22 00:17:32,329 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-22 01:18:12] 2025-11-22 00:17:32,329 | INFO     | ready for new job
[2025-11-22 01:18:12] 2025-11-22 00:17:32,329 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-22 01:18:12] 2025-11-22 00:17:32,337 | INFO     | ***************************************
[2025-11-22 01:18:12] 2025-11-22 00:17:32,337 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-22 01:18:12] 2025-11-22 00:17:32,337 | INFO     | ***************************************
[2025-11-22 01:18:12] 2025-11-22 00:17:32,337 | INFO     | 
[2025-11-22 01:18:12] 2025-11-22 00:17:32,338 | INFO     | pilot is running in a VM
[2025-11-22 01:18:12] 2025-11-22 00:17:32,338 | INFO     | architecture information:
[2025-11-22 01:18:12] 2025-11-22 00:17:32,341 | INFO     | executing command: cat /etc/os-release
[2025-11-22 01:18:12] 2025-11-22 00:17:32,596 | INFO     | cat /etc/os-release:
[2025-11-22 01:18:12] NAME="CentOS Linux"
[2025-11-22 01:18:12] VERSION="7 (Core)"
[2025-11-22 01:18:12] ID="centos"
[2025-11-22 01:18:12] ID_LIKE="rhel fedora"
[2025-11-22 01:18:12] VERSION_ID="7"
[2025-11-22 01:18:12] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-22 01:18:12] ANSI_COLOR="0;31"
[2025-11-22 01:18:12] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-22 01:18:12] HOME_URL="https://www.centos.org/"
[2025-11-22 01:18:12] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-22 01:18:12] 
[2025-11-22 01:18:12] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-22 01:18:12] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-22 01:18:12] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-22 01:18:12] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-22 01:18:12] 
[2025-11-22 01:18:12] 2025-11-22 00:17:32,596 | INFO     | ***************************************
[2025-11-22 01:18:12] 2025-11-22 00:17:33,102 | INFO     | executing command: df -mP /var/lib/boinc/slots/14
[2025-11-22 01:18:12] 2025-11-22 00:17:33,360 | INFO     | sufficient remaining disk space (493582548992 B)
[2025-11-22 01:18:12] 2025-11-22 00:17:33,360 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-22 01:18:12] 2025-11-22 00:17:33,360 | INFO     | current server update state: UPDATING_FINAL
[2025-11-22 01:18:12] 2025-11-22 00:17:33,361 | INFO     | update_server=False
[2025-11-22 01:18:12] 2025-11-22 00:17:33,361 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-22 01:18:12] 2025-11-22 00:17:33,367 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-22 01:18:12] 2025-11-22 00:17:33,378 | INFO     | all data control threads have been joined
[2025-11-22 01:18:12] 2025-11-22 00:17:34,335 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-22 01:18:12] 2025-11-22 00:17:34,336 | INFO     | aborting loop
[2025-11-22 01:18:12] 2025-11-22 00:17:34,353 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-22 01:18:12] 2025-11-22 00:17:34,367 | INFO     | [job] retrieve thread has finished
[2025-11-22 01:18:12] 2025-11-22 00:17:34,384 | INFO     | [data] control thread has finished
[2025-11-22 01:18:12] 2025-11-22 00:17:34,497 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-22 01:18:12] 2025-11-22 00:17:34,509 | INFO     | all payload control threads have been joined
[2025-11-22 01:18:12] 2025-11-22 00:17:34,727 | INFO     | [job] create_data_payload thread has finished
[2025-11-22 01:18:12] 2025-11-22 00:17:34,786 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-22 01:18:12] 2025-11-22 00:17:34,970 | INFO     | all job control threads have been joined
[2025-11-22 01:18:12] 2025-11-22 00:17:35,176 | INFO     | [job] validate thread has finished
[2025-11-22 01:18:12] 2025-11-22 00:17:35,316 | INFO     | [payload] validate_post thread has finished
[2025-11-22 01:18:12] 2025-11-22 00:17:35,342 | INFO     | [job] job monitor thread has finished
[2025-11-22 01:18:12] 2025-11-22 00:17:35,369 | INFO     | [payload] execute_payloads thread has finished
[2025-11-22 01:18:12] 2025-11-22 00:17:35,373 | INFO     | [payload] validate_pre thread has finished
[2025-11-22 01:18:12] 2025-11-22 00:17:35,374 | INFO     | [data] copytool_in thread has finished
[2025-11-22 01:18:12] 2025-11-22 00:17:35,515 | INFO     | [payload] control thread has finished
[2025-11-22 01:18:12] 2025-11-22 00:17:35,792 | INFO     | [job] queue monitor thread has finished
[2025-11-22 01:18:12] 2025-11-22 00:17:35,956 | INFO     | [payload] failed_post thread has finished
[2025-11-22 01:18:12] 2025-11-22 00:17:35,976 | INFO     | [job] control thread has finished
[2025-11-22 01:18:12] 2025-11-22 00:17:36,360 | INFO     | [data] copytool_out thread has finished
[2025-11-22 01:18:12] 2025-11-22 00:17:37,375 | INFO     | [data] queue_monitor thread has finished
[2025-11-22 01:18:12] 2025-11-22 00:18:01,808 | INFO     | PID=10211 has CPU usage=2.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-22 01:18:12] 2025-11-22 00:18:01,812 | INFO     | .. there are 9 such processes running
[2025-11-22 01:18:12] 2025-11-22 00:18:01,813 | INFO     | found 0 job(s) in 20 queues
[2025-11-22 01:18:12] 2025-11-22 00:18:01,813 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-22 01:18:12] 2025-11-22 00:18:01,813 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-22 01:18:12] 2025-11-22 00:18:03,199 | INFO     | [monitor] cgroup control has ended
[2025-11-22 01:18:12] 2025-11-22 00:18:03,508 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140711827986240)>', '<ExcThread(monitor, started 140711080998656)>']
[2025-11-22 01:18:12] 2025-11-22 00:18:03,825 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-22 01:18:12] 2025-11-22 00:18:03,826 | INFO     | [monitor] control thread has ended
[2025-11-22 01:18:12] 2025-11-22 00:18:08,533 | INFO     | all workflow threads have been joined
[2025-11-22 01:18:12] 2025-11-22 00:18:08,534 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-22 01:18:12] 2025-11-22 00:18:08,534 | INFO     | traces error code: 0
[2025-11-22 01:18:12] 2025-11-22 00:18:08,534 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-22 01:18:12] 2025-11-22 00:18:08,886 [wrapper] ==== pilot stdout END ====
[2025-11-22 01:18:12] 2025-11-22 00:18:08,971 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-22 01:18:12] 2025-11-22 00:18:09,073 [wrapper] pilotpid: 10211
[2025-11-22 01:18:12] 2025-11-22 00:18:09,124 [wrapper] Pilot exit status: 0
[2025-11-22 01:18:12] 2025-11-22 00:18:09,385 [wrapper] pandaids: 6891572070
[2025-11-22 01:18:12] 2025-11-22 00:18:09,853 [wrapper] cleanup supervisor_pilot  4754 10212
[2025-11-22 01:18:12] 2025-11-22 00:18:09,895 [wrapper] Test setup, not cleaning
[2025-11-22 01:18:12] 2025-11-22 00:18:09,931 [wrapper] apfmon messages muted
[2025-11-22 01:18:12] 2025-11-22 00:18:10,041 [wrapper] ==== wrapper stdout END ====
[2025-11-22 01:18:12] 2025-11-22 00:18:10,177 [wrapper] ==== wrapper stderr END ====
[2025-11-22 01:18:12]  *** Error codes and diagnostics ***
[2025-11-22 01:18:12]     "exeErrorCode": 0,
[2025-11-22 01:18:12]     "exeErrorDiag": "",
[2025-11-22 01:18:12]     "pilotErrorCode": 0,
[2025-11-22 01:18:12]     "pilotErrorDiag": "",
[2025-11-22 01:18:12]  *** Listing of results directory ***
[2025-11-22 01:18:12] total 1341020
[2025-11-22 01:18:12] -rw-r--r--. 1 boinc boinc    576529 Nov 18 16:47 pilot3.tar.gz
[2025-11-22 01:18:12] -rw-r--r--. 1 boinc boinc      5112 Nov 18 17:16 queuedata.json
[2025-11-22 01:18:12] -rwx------. 1 boinc boinc     36292 Nov 18 17:16 runpilot2-wrapper.sh
[2025-11-22 01:18:12] -rw-r--r--. 1 boinc boinc       100 Nov 20 23:00 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-22 01:18:12] -rwxr-xr-x. 1 boinc boinc      7986 Nov 20 23:00 run_atlas
[2025-11-22 01:18:12] -rw-r--r--. 1 boinc boinc       105 Nov 20 23:00 job.xml
[2025-11-22 01:18:12] -rw-r--r--. 2 boinc boinc 409667291 Nov 20 23:00 EVNT.47493065._000325.pool.root.1
[2025-11-22 01:18:12] -rw-r--r--. 1 boinc boinc      6393 Nov 20 23:00 init_data.xml
[2025-11-22 01:18:12] -rw-r--r--. 2 boinc boinc     15120 Nov 20 23:00 start_atlas.sh
[2025-11-22 01:18:12] drwxrwx--x. 2 boinc boinc        68 Nov 20 23:00 shared
[2025-11-22 01:18:12] -rw-r--r--. 2 boinc boinc    590098 Nov 20 23:00 input.tar.gz
[2025-11-22 01:18:12] -rw-r--r--. 1 boinc boinc         0 Nov 20 23:00 boinc_lockfile
[2025-11-22 01:18:12] -rw-r--r--. 1 boinc boinc      2773 Nov 20 23:01 pandaJob.out
[2025-11-22 01:18:12] -rw-------. 1 boinc boinc    989440 Nov 20 23:05 agis_schedconf.cvmfs.json
[2025-11-22 01:18:12] drwx------. 5 boinc boinc      4096 Nov 20 23:05 pilot3
[2025-11-22 01:18:12] -rw-r--r--. 1 boinc boinc       533 Nov 22 00:56 boinc_task_state.xml
[2025-11-22 01:18:12] -rw-------. 1 boinc boinc 929368248 Nov 22 01:14 HITS.47493068._003243.pool.root.1
[2025-11-22 01:18:12] -rw-------. 1 boinc boinc      1035 Nov 22 01:15 memory_monitor_summary.json
[2025-11-22 01:18:12] -rw-------. 1 boinc boinc   1526164 Nov 22 01:15 agis_ddmendpoints.agis.ALL.json
[2025-11-22 01:18:12] -rw-------. 1 boinc boinc   2587248 Nov 22 01:15 log.47493068._003243.job.log.tgz.1
[2025-11-22 01:18:12] -rw-------. 1 boinc boinc        95 Nov 22 01:17 pilot_heartbeat.json
[2025-11-22 01:18:12] -rw-------. 1 boinc boinc      8628 Nov 22 01:17 heartbeat.json
[2025-11-22 01:18:12] -rw-r--r--. 1 boinc boinc        29 Nov 22 01:17 wrapper_checkpoint.txt
[2025-11-22 01:18:12] -rw-r--r--. 1 boinc boinc      8192 Nov 22 01:17 boinc_mmap_file
[2025-11-22 01:18:12] -rw-------. 1 boinc boinc      4885 Nov 22 01:18 pilotlog.txt
[2025-11-22 01:18:12] -rw-------. 1 boinc boinc  12541985 Nov 22 01:18 log.47493068._003243.job.log.1
[2025-11-22 01:18:12] -rw-------. 1 boinc boinc       353 Nov 22 01:18 output.list
[2025-11-22 01:18:12] -rw-r--r--. 1 boinc boinc       620 Nov 22 01:18 runtime_log
[2025-11-22 01:18:12] -rw-------. 1 boinc boinc  15144960 Nov 22 01:18 result.tar.gz
[2025-11-22 01:18:12] -rw-r--r--. 1 boinc boinc      8717 Nov 22 01:18 runtime_log.err
[2025-11-22 01:18:12] -rw-------. 1 boinc boinc       662 Nov 22 01:18 o5CNDmhYdf8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmxSFKDmlPtVRn.diag
[2025-11-22 01:18:12] -rw-r--r--. 1 boinc boinc     20830 Nov 22 01:18 stderr.txt
[2025-11-22 01:18:12] HITS file was successfully produced:
[2025-11-22 01:18:12] -rw-------. 1 boinc boinc 929368248 Nov 22 01:14 shared/HITS.pool.root.1
[2025-11-22 01:18:12]  *** Contents of shared directory: ***
[2025-11-22 01:18:12] total 1323044
[2025-11-22 01:18:12] -rw-r--r--. 2 boinc boinc 409667291 Nov 20 23:00 ATLAS.root_0
[2025-11-22 01:18:12] -rw-r--r--. 2 boinc boinc     15120 Nov 20 23:00 start_atlas.sh
[2025-11-22 01:18:12] -rw-r--r--. 2 boinc boinc    590098 Nov 20 23:00 input.tar.gz
[2025-11-22 01:18:12] -rw-------. 1 boinc boinc 929368248 Nov 22 01:14 HITS.pool.root.1
[2025-11-22 01:18:12] -rw-------. 1 boinc boinc  15144960 Nov 22 01:18 result.tar.gz
01:18:14 (6399): run_atlas exited; CPU time 346292.922188
01:18:14 (6399): called boinc_finish(0)

</stderr_txt>
]]>

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