Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
19:45:08 (32542): wrapper (7.7.26015): starting
19:45:08 (32542): wrapper: running run_atlas (--nthreads 8)
[2025-11-19 19:45:08] Arguments: --nthreads 8
[2025-11-19 19:45:08] Threads: 8
[2025-11-19 19:45:08] Checking for CVMFS
[2025-11-19 19:45:09] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-19 19:45:09] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-19 19:45:09] Running cvmfs_config stat atlas.cern.ch
[2025-11-19 19:45:10] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-19 19:45:10] 2.11.2.0 22643 136573 139228 153052 3 243 16385830 25165825 4016 130560 2 40634559 99.865 23141426 2255 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-11-19 19:45:10] CVMFS is ok
[2025-11-19 19:45:10] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-19 19:45:10] Checking for apptainer binary...
[2025-11-19 19:45:10] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-19 19:45:10] Running /usr/bin/apptainer --version
[2025-11-19 19:45:11] apptainer version 1.3.2-1.el7
[2025-11-19 19:45:11] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-19 19:45:14] cg-vwn227.simple-grid.lan
[2025-11-19 19:45:14] apptainer works
[2025-11-19 19:45:14] Set ATHENA_PROC_NUMBER=8
[2025-11-19 19:45:14] Set ATHENA_CORE_NUMBER=8
[2025-11-19 19:45:14] Starting ATLAS job with PandaID=6891571915
[2025-11-19 19:45:14] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-20 21:59:15]  *** The last 200 lines of the pilot log: ***
[2025-11-20 21:59:15] 2025-11-20 20:57:55,778 | INFO     | job 6891571915 has finished - writing final server update
[2025-11-20 21:59:15] 2025-11-20 20:57:55,779 | INFO     | total number of processed events: 1000 (read)
[2025-11-20 21:59:15] 2025-11-20 20:57:55,779 | INFO     | executing command: lscpu
[2025-11-20 21:59:15] 2025-11-20 20:57:55,901 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-11-20 21:59:15] 2025-11-20 20:57:56,157 | INFO     | time since job start (94235s) is within the limit (172800.0s)
[2025-11-20 21:59:15] 2025-11-20 20:57:56,841 | INFO     | monitor loop #6237: job 0:6891571915 is in state 'finished'
[2025-11-20 21:59:15] 2025-11-20 20:57:56,841 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-20 21:59:15] 2025-11-20 20:57:58,164 | INFO     | time since job start (94237s) is within the limit (172800.0s)
[2025-11-20 21:59:15] 2025-11-20 20:57:59,346 | INFO     | monitor loop #6238: job 0:6891571915 is in state 'finished'
[2025-11-20 21:59:15] 2025-11-20 20:57:59,347 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-20 21:59:15] 2025-11-20 20:57:59,352 | INFO     | PID=3918 has CPU usage=15.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-20 21:59:15] 2025-11-20 20:57:59,352 | INFO     | .. there are 9 such processes running
[2025-11-20 21:59:15] 2025-11-20 20:58:00,353 | INFO     | time since job start (94239s) is within the limit (172800.0s)
[2025-11-20 21:59:15] 2025-11-20 20:58:01,871 | INFO     | monitor loop #6239: job 0:6891571915 is in state 'finished'
[2025-11-20 21:59:15] 2025-11-20 20:58:01,872 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-20 21:59:15] 2025-11-20 20:58:02,361 | INFO     | time since job start (94241s) is within the limit (172800.0s)
[2025-11-20 21:59:15] 2025-11-20 20:58:03,962 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-20 21:59:15] 2025-11-20 20:58:03,963 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2025-11-20 21:59:15] 2025-11-20 20:58:03,965 | INFO     | using path: /var/lib/boinc/slots/6/PanDA_Pilot-6891571915/memory_monitor_summary.json (trf name=prmon)
[2025-11-20 21:59:15] 2025-11-20 20:58:03,966 | INFO     | extracted standard info from prmon json
[2025-11-20 21:59:15] 2025-11-20 20:58:03,966 | INFO     | extracted standard memory fields from prmon json
[2025-11-20 21:59:15] 2025-11-20 20:58:03,966 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-20 21:59:15] 2025-11-20 20:58:03,995 | INFO     | fitting pss+swap vs Time
[2025-11-20 21:59:15] 2025-11-20 20:58:03,998 | INFO     | sum of square deviations: 1139134146230.3655
[2025-11-20 21:59:15] 2025-11-20 20:58:04,087 | INFO     | sum of deviations: 2675992863714.5283
[2025-11-20 21:59:15] 2025-11-20 20:58:04,088 | INFO     | mean x: 1763625215.2819183
[2025-11-20 21:59:15] 2025-11-20 20:58:04,088 | INFO     | mean y: 2859644.430978613
[2025-11-20 21:59:15] 2025-11-20 20:58:04,088 | INFO     | intersect: -4140154157.744173
[2025-11-20 21:59:15] 2025-11-20 20:58:04,090 | INFO     | chi2: 16.69574668943525
[2025-11-20 21:59:15] 2025-11-20 20:58:04,092 | INFO     | sum of square deviations: 1128096672784.6233
[2025-11-20 21:59:15] 2025-11-20 20:58:04,164 | INFO     | sum of deviations: 3187367259405.6973
[2025-11-20 21:59:15] 2025-11-20 20:58:04,164 | INFO     | mean x: 1763625062.7860858
[2025-11-20 21:59:15] 2025-11-20 20:58:04,164 | INFO     | mean y: 2866709.032509753
[2025-11-20 21:59:15] 2025-11-20 20:58:04,164 | INFO     | intersect: -4980146643.108555
[2025-11-20 21:59:15] 2025-11-20 20:58:04,166 | INFO     | chi2: 13.471756323830519
[2025-11-20 21:59:15] 2025-11-20 20:58:04,166 | INFO     | current chi2=13.471756323830519 (change=19.310249643670087 %)
[2025-11-20 21:59:15] 2025-11-20 20:58:04,166 | INFO     | right removable region: 1537
[2025-11-20 21:59:15] 2025-11-20 20:58:04,169 | INFO     | sum of square deviations: 1128095466204.623
[2025-11-20 21:59:15] 2025-11-20 20:58:04,240 | INFO     | sum of deviations: 2208167900933.05
[2025-11-20 21:59:15] 2025-11-20 20:58:04,241 | INFO     | mean x: 1763625367.7860858
[2025-11-20 21:59:15] 2025-11-20 20:58:04,241 | INFO     | mean y: 2866104.9089726917
[2025-11-20 21:59:15] 2025-11-20 20:58:04,241 | INFO     | intersect: -3449307087.062783
[2025-11-20 21:59:15] 2025-11-20 20:58:04,243 | INFO     | chi2: 14.286400231540316
[2025-11-20 21:59:15] 2025-11-20 20:58:04,243 | INFO     | current chi2=14.286400231540316 (change=14.43089969386947 %)
[2025-11-20 21:59:15] 2025-11-20 20:58:04,243 | INFO     | left removable region: 10
[2025-11-20 21:59:15] 2025-11-20 20:58:04,245 | INFO     | sum of square deviations: 1104063859071.317
[2025-11-20 21:59:15] 2025-11-20 20:58:04,318 | INFO     | sum of deviations: 2721370879609.6694
[2025-11-20 21:59:15] 2025-11-20 20:58:04,318 | INFO     | mean x: 1763625337.2914212
[2025-11-20 21:59:15] 2025-11-20 20:58:04,318 | INFO     | mean y: 2876761.005239031
[2025-11-20 21:59:15] 2025-11-20 20:58:04,318 | INFO     | intersect: -4344225624.434436
[2025-11-20 21:59:15] 2025-11-20 20:58:04,320 | INFO     | chi2: 9.988990370918167
[2025-11-20 21:59:15] 2025-11-20 20:58:04,320 | INFO     | current memory leak: 2.46 B/s (using 1527 data points, chi2=9.99)
[2025-11-20 21:59:15] 2025-11-20 20:58:04,323 | INFO     | could have reported an average CPU frequency of 1999 MHz (52 samples)
[2025-11-20 21:59:15] 2025-11-20 20:58:04,323 | INFO     | ..............................
[2025-11-20 21:59:15] 2025-11-20 20:58:04,324 | INFO     | . Timing measurements:
[2025-11-20 21:59:15] 2025-11-20 20:58:04,324 | INFO     | . get job = 0 s
[2025-11-20 21:59:15] 2025-11-20 20:58:04,324 | INFO     | . initial setup = 3 s
[2025-11-20 21:59:15] 2025-11-20 20:58:04,324 | INFO     | . payload setup = 19 s
[2025-11-20 21:59:15] 2025-11-20 20:58:04,324 | INFO     | . stage-in = 0 s
[2025-11-20 21:59:15] 2025-11-20 20:58:04,324 | INFO     | . payload execution = 94104 s
[2025-11-20 21:59:15] 2025-11-20 20:58:04,324 | INFO     | . stage-out = 4 s
[2025-11-20 21:59:15] 2025-11-20 20:58:04,324 | INFO     | . log creation = 1 s
[2025-11-20 21:59:15] 2025-11-20 20:58:04,324 | INFO     | ..............................
[2025-11-20 21:59:15] 2025-11-20 20:58:04,427 | INFO     | time since job start (94243s) is within the limit (172800.0s)
[2025-11-20 21:59:15] 2025-11-20 20:58:04,459 | INFO     | 
[2025-11-20 21:59:15] 2025-11-20 20:58:04,460 | INFO     | job summary report
[2025-11-20 21:59:15] 2025-11-20 20:58:04,460 | INFO     | --------------------------------------------------
[2025-11-20 21:59:15] 2025-11-20 20:58:04,460 | INFO     | PanDA job id: 6891571915
[2025-11-20 21:59:15] 2025-11-20 20:58:04,460 | INFO     | task id: 47493068
[2025-11-20 21:59:15] 2025-11-20 20:58:04,460 | INFO     | errors: (none)
[2025-11-20 21:59:15] 2025-11-20 20:58:04,460 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-20 21:59:15] 2025-11-20 20:58:04,461 | INFO     | pilot state: finished 
[2025-11-20 21:59:15] 2025-11-20 20:58:04,461 | INFO     | transexitcode: 0
[2025-11-20 21:59:15] 2025-11-20 20:58:04,461 | INFO     | exeerrorcode: 0
[2025-11-20 21:59:15] 2025-11-20 20:58:04,461 | INFO     | exeerrordiag: 
[2025-11-20 21:59:15] 2025-11-20 20:58:04,461 | INFO     | exitcode: 0
[2025-11-20 21:59:15] 2025-11-20 20:58:04,461 | INFO     | exitmsg: OK
[2025-11-20 21:59:15] 2025-11-20 20:58:04,461 | INFO     | cpuconsumptiontime: 346677 s
[2025-11-20 21:59:15] 2025-11-20 20:58:04,461 | INFO     | nevents: 1000
[2025-11-20 21:59:15] 2025-11-20 20:58:04,461 | INFO     | neventsw: 0
[2025-11-20 21:59:15] 2025-11-20 20:58:04,461 | INFO     | pid: 10527
[2025-11-20 21:59:15] 2025-11-20 20:58:04,461 | INFO     | pgrp: 10527
[2025-11-20 21:59:15] 2025-11-20 20:58:04,462 | INFO     | corecount: 8
[2025-11-20 21:59:15] 2025-11-20 20:58:04,462 | INFO     | event service: False
[2025-11-20 21:59:15] 2025-11-20 20:58:04,462 | INFO     | sizes: {0: 2296372, 1: 2296973, 2: 2297256, 3: 2297284, 13: 2297284, 24: 2297340, 35: 2297496, 46: 2297524, 57: 2297552, 67: 2297580, 76: 2297870, 78: 2298206, 941
[2025-11-20 21:59:15] 2025-11-20 20:58:04,462 | INFO     | --------------------------------------------------
[2025-11-20 21:59:15] 2025-11-20 20:58:04,462 | INFO     | 
[2025-11-20 21:59:15] 2025-11-20 20:58:04,462 | INFO     | executing command: ls -lF /var/lib/boinc/slots/6
[2025-11-20 21:59:15] 2025-11-20 20:58:04,527 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-20 21:59:15] 2025-11-20 20:58:04,528 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-20 21:59:15] 2025-11-20 20:58:04,528 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-20 21:59:15] 2025-11-20 20:58:04,528 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-20 21:59:15] 2025-11-20 20:58:04,528 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-20 21:59:15] 2025-11-20 20:58:04,528 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-20 21:59:15] 2025-11-20 20:58:04,528 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-20 21:59:15] 2025-11-20 20:58:04,528 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-20 21:59:15] 2025-11-20 20:58:04,528 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-20 21:59:15] 2025-11-20 20:58:04,528 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-20 21:59:15] 2025-11-20 20:58:04,528 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-20 21:59:15] 2025-11-20 20:58:04,529 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-20 21:59:15] 2025-11-20 20:58:04,529 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-20 21:59:15] 2025-11-20 20:58:04,529 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-20 21:59:15] 2025-11-20 20:58:04,529 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-20 21:59:15] 2025-11-20 20:58:04,529 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-20 21:59:15] 2025-11-20 20:58:04,529 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-20 21:59:15] 2025-11-20 20:58:04,529 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-20 21:59:15] 2025-11-20 20:58:04,529 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-20 21:59:15] 2025-11-20 20:58:04,529 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-20 21:59:15] 2025-11-20 20:58:04,529 | INFO     | job 6891571915 has completed (purged errors)
[2025-11-20 21:59:15] 2025-11-20 20:58:04,530 | INFO     | overall cleanup function is called
[2025-11-20 21:59:15] 2025-11-20 20:58:05,547 | INFO     | --- collectZombieJob: --- 10, [10527]
[2025-11-20 21:59:15] 2025-11-20 20:58:05,548 | INFO     | zombie collector waiting for pid 10527
[2025-11-20 21:59:15] 2025-11-20 20:58:05,548 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-20 21:59:15] 2025-11-20 20:58:05,548 | INFO     | collected zombie processes
[2025-11-20 21:59:15] 2025-11-20 20:58:05,548 | INFO     | will attempt to kill all subprocesses of pid=10527
[2025-11-20 21:59:15] 2025-11-20 20:58:05,664 | INFO     | process IDs to be killed: [10527] (in reverse order)
[2025-11-20 21:59:15] 2025-11-20 20:58:05,758 | WARNING  | found no corresponding commands to process id(s)
[2025-11-20 21:59:15] 2025-11-20 20:58:05,759 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-20 21:59:15] 2025-11-20 20:58:05,762 | INFO     | did not find any defunct processes belonging to 10527
[2025-11-20 21:59:15] 2025-11-20 20:58:05,766 | INFO     | did not find any defunct processes belonging to 10527
[2025-11-20 21:59:15] 2025-11-20 20:58:05,768 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-20 21:59:15] 2025-11-20 20:58:05,768 | INFO     | ready for new job
[2025-11-20 21:59:15] 2025-11-20 20:58:05,768 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-20 21:59:15] 2025-11-20 20:58:05,776 | INFO     | ***************************************
[2025-11-20 21:59:15] 2025-11-20 20:58:05,776 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-20 21:59:15] 2025-11-20 20:58:05,776 | INFO     | ***************************************
[2025-11-20 21:59:15] 2025-11-20 20:58:05,776 | INFO     | 
[2025-11-20 21:59:15] 2025-11-20 20:58:05,777 | INFO     | pilot is running in a VM
[2025-11-20 21:59:15] 2025-11-20 20:58:05,777 | INFO     | architecture information:
[2025-11-20 21:59:15] 2025-11-20 20:58:05,778 | INFO     | executing command: cat /etc/os-release
[2025-11-20 21:59:15] 2025-11-20 20:58:05,803 | INFO     | cat /etc/os-release:
[2025-11-20 21:59:15] NAME="CentOS Linux"
[2025-11-20 21:59:15] VERSION="7 (Core)"
[2025-11-20 21:59:15] ID="centos"
[2025-11-20 21:59:15] ID_LIKE="rhel fedora"
[2025-11-20 21:59:15] VERSION_ID="7"
[2025-11-20 21:59:15] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-20 21:59:15] ANSI_COLOR="0;31"
[2025-11-20 21:59:15] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-20 21:59:15] HOME_URL="https://www.centos.org/"
[2025-11-20 21:59:15] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-20 21:59:15] 
[2025-11-20 21:59:15] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-20 21:59:15] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-20 21:59:15] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-20 21:59:15] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-20 21:59:15] 
[2025-11-20 21:59:15] 2025-11-20 20:58:05,803 | INFO     | ***************************************
[2025-11-20 21:59:15] 2025-11-20 20:58:06,307 | INFO     | executing command: df -mP /var/lib/boinc/slots/6
[2025-11-20 21:59:15] 2025-11-20 20:58:06,379 | INFO     | sufficient remaining disk space (494483275776 B)
[2025-11-20 21:59:15] 2025-11-20 20:58:06,380 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-20 21:59:15] 2025-11-20 20:58:06,380 | INFO     | current server update state: UPDATING_FINAL
[2025-11-20 21:59:15] 2025-11-20 20:58:06,380 | INFO     | update_server=False
[2025-11-20 21:59:15] 2025-11-20 20:58:06,380 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-20 21:59:15] 2025-11-20 20:58:06,382 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-20 21:59:15] 2025-11-20 20:58:06,382 | INFO     | aborting loop
[2025-11-20 21:59:15] 2025-11-20 20:58:06,382 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-20 21:59:15] 2025-11-20 20:58:06,382 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-11-20 21:59:15] 2025-11-20 20:58:06,383 | INFO     | found 0 job(s) in 20 queues
[2025-11-20 21:59:15] 2025-11-20 20:58:06,383 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-20 21:59:15] 2025-11-20 20:58:06,383 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-20 21:59:15] 2025-11-20 20:58:06,522 | INFO     | all payload control threads have been joined
[2025-11-20 21:59:15] 2025-11-20 20:58:06,619 | INFO     | all data control threads have been joined
[2025-11-20 21:59:15] 2025-11-20 20:58:06,743 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-20 21:59:15] 2025-11-20 20:58:07,237 | INFO     | all job control threads have been joined
[2025-11-20 21:59:15] 2025-11-20 20:58:07,385 | INFO     | [job] retrieve thread has finished
[2025-11-20 21:59:15] 2025-11-20 20:58:07,388 | INFO     | [job] job monitor thread has finished
[2025-11-20 21:59:15] 2025-11-20 20:58:07,389 | INFO     | [job] queue monitor thread has finished
[2025-11-20 21:59:15] 2025-11-20 20:58:07,528 | INFO     | [payload] control thread has finished
[2025-11-20 21:59:15] 2025-11-20 20:58:07,626 | INFO     | [data] control thread has finished
[2025-11-20 21:59:15] 2025-11-20 20:58:07,877 | INFO     | [job] create_data_payload thread has finished
[2025-11-20 21:59:15] 2025-11-20 20:58:08,195 | INFO     | [payload] validate_pre thread has finished
[2025-11-20 21:59:15] 2025-11-20 20:58:08,223 | INFO     | [payload] failed_post thread has finished
[2025-11-20 21:59:15] 2025-11-20 20:58:08,244 | INFO     | [job] control thread has finished
[2025-11-20 21:59:15] 2025-11-20 20:58:08,275 | INFO     | [payload] execute_payloads thread has finished
[2025-11-20 21:59:15] 2025-11-20 20:58:08,286 | INFO     | [data] copytool_in thread has finished
[2025-11-20 21:59:15] 2025-11-20 20:58:08,351 | INFO     | [payload] validate_post thread has finished
[2025-11-20 21:59:15] 2025-11-20 20:58:08,749 | INFO     | [data] copytool_out thread has finished
[2025-11-20 21:59:15] 2025-11-20 20:58:08,756 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-20 21:59:15] 2025-11-20 20:58:08,873 | INFO     | [job] validate thread has finished
[2025-11-20 21:59:15] 2025-11-20 20:58:09,636 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-20 21:59:15] 2025-11-20 20:58:13,645 | INFO     | [data] queue_monitor thread has finished
[2025-11-20 21:59:15] 2025-11-20 20:59:05,151 | INFO     | [monitor] cgroup control has ended
[2025-11-20 21:59:15] 2025-11-20 20:59:06,968 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139909782918976)>', '<ExcThread(monitor, started 139909323007744)>']
[2025-11-20 21:59:15] 2025-11-20 20:59:07,745 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-20 21:59:15] 2025-11-20 20:59:07,746 | INFO     | [monitor] control thread has ended
[2025-11-20 21:59:15] 2025-11-20 20:59:11,994 | INFO     | all workflow threads have been joined
[2025-11-20 21:59:15] 2025-11-20 20:59:11,995 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-20 21:59:15] 2025-11-20 20:59:11,995 | INFO     | traces error code: 0
[2025-11-20 21:59:15] 2025-11-20 20:59:11,996 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-20 21:59:15] 2025-11-20 20:59:12,239 [wrapper] ==== pilot stdout END ====
[2025-11-20 21:59:15] 2025-11-20 20:59:12,259 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-20 21:59:15] 2025-11-20 20:59:12,338 [wrapper] pilotpid: 3918
[2025-11-20 21:59:15] 2025-11-20 20:59:12,365 [wrapper] Pilot exit status: 0
[2025-11-20 21:59:15] 2025-11-20 20:59:12,687 [wrapper] pandaids: 6891571915
[2025-11-20 21:59:15] 2025-11-20 20:59:13,061 [wrapper] cleanup supervisor_pilot 15306 3919
[2025-11-20 21:59:15] 2025-11-20 20:59:13,078 [wrapper] Test setup, not cleaning
[2025-11-20 21:59:15] 2025-11-20 20:59:13,089 [wrapper] apfmon messages muted
[2025-11-20 21:59:15] 2025-11-20 20:59:13,170 [wrapper] ==== wrapper stdout END ====
[2025-11-20 21:59:15] 2025-11-20 20:59:13,323 [wrapper] ==== wrapper stderr END ====
[2025-11-20 21:59:15]  *** Error codes and diagnostics ***
[2025-11-20 21:59:15]     "exeErrorCode": 0,
[2025-11-20 21:59:15]     "exeErrorDiag": "",
[2025-11-20 21:59:15]     "pilotErrorCode": 0,
[2025-11-20 21:59:15]     "pilotErrorDiag": "",
[2025-11-20 21:59:15]  *** Listing of results directory ***
[2025-11-20 21:59:15] total 1342236
[2025-11-20 21:59:15] -rw-r--r--. 1 boinc boinc    576529 Nov 18 16:47 pilot3.tar.gz
[2025-11-20 21:59:15] -rw-r--r--. 1 boinc boinc      5112 Nov 18 17:03 queuedata.json
[2025-11-20 21:59:15] -rwx------. 1 boinc boinc     36292 Nov 18 17:03 runpilot2-wrapper.sh
[2025-11-20 21:59:15] -rw-r--r--. 1 boinc boinc       100 Nov 19 19:45 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-20 21:59:15] -rwxr-xr-x. 1 boinc boinc      7986 Nov 19 19:45 run_atlas
[2025-11-20 21:59:15] -rw-r--r--. 1 boinc boinc       105 Nov 19 19:45 job.xml
[2025-11-20 21:59:15] -rw-r--r--. 2 boinc boinc 410390002 Nov 19 19:45 EVNT.47493065._000311.pool.root.1
[2025-11-20 21:59:15] -rw-r--r--. 1 boinc boinc      6391 Nov 19 19:45 init_data.xml
[2025-11-20 21:59:15] -rw-r--r--. 2 boinc boinc     15120 Nov 19 19:45 start_atlas.sh
[2025-11-20 21:59:15] drwxrwx--x. 2 boinc boinc        68 Nov 19 19:45 shared
[2025-11-20 21:59:15] -rw-r--r--. 2 boinc boinc    590098 Nov 19 19:45 input.tar.gz
[2025-11-20 21:59:15] -rw-r--r--. 1 boinc boinc         0 Nov 19 19:45 boinc_lockfile
[2025-11-20 21:59:15] -rw-r--r--. 1 boinc boinc      2773 Nov 19 19:45 pandaJob.out
[2025-11-20 21:59:15] -rw-------. 1 boinc boinc    989434 Nov 19 19:47 agis_schedconf.cvmfs.json
[2025-11-20 21:59:15] drwx------. 5 boinc boinc      4096 Nov 19 19:47 pilot3
[2025-11-20 21:59:15] -rw-r--r--. 1 boinc boinc       533 Nov 20 21:30 boinc_task_state.xml
[2025-11-20 21:59:15] -rw-------. 1 boinc boinc 929926129 Nov 20 21:56 HITS.47493068._003107.pool.root.1
[2025-11-20 21:59:15] -rw-------. 1 boinc boinc      1033 Nov 20 21:57 memory_monitor_summary.json
[2025-11-20 21:59:15] -rw-------. 1 boinc boinc   1526164 Nov 20 21:57 agis_ddmendpoints.agis.ALL.json
[2025-11-20 21:59:15] -rw-------. 1 boinc boinc   2587987 Nov 20 21:57 log.47493068._003107.job.log.tgz.1
[2025-11-20 21:59:15] -rw-------. 1 boinc boinc      8623 Nov 20 21:58 heartbeat.json
[2025-11-20 21:59:15] -rw-------. 1 boinc boinc        95 Nov 20 21:58 pilot_heartbeat.json
[2025-11-20 21:59:15] -rw-r--r--. 1 boinc boinc        29 Nov 20 21:59 wrapper_checkpoint.txt
[2025-11-20 21:59:15] -rw-r--r--. 1 boinc boinc      8192 Nov 20 21:59 boinc_mmap_file
[2025-11-20 21:59:15] -rw-------. 1 boinc boinc      4615 Nov 20 21:59 pilotlog.txt
[2025-11-20 21:59:15] -rw-------. 1 boinc boinc  12523978 Nov 20 21:59 log.47493068._003107.job.log.1
[2025-11-20 21:59:15] -rw-------. 1 boinc boinc       353 Nov 20 21:59 output.list
[2025-11-20 21:59:15] -rw-r--r--. 1 boinc boinc       620 Nov 20 21:59 runtime_log
[2025-11-20 21:59:15] -rw-------. 1 boinc boinc  15134720 Nov 20 21:59 result.tar.gz
[2025-11-20 21:59:15] -rw-r--r--. 1 boinc boinc      8703 Nov 20 21:59 runtime_log.err
[2025-11-20 21:59:15] -rw-------. 1 boinc boinc       662 Nov 20 21:59 fe5LDmVMdf8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmUjFKDm0S8LPo.diag
[2025-11-20 21:59:15] -rw-r--r--. 1 boinc boinc     21476 Nov 20 21:59 stderr.txt
[2025-11-20 21:59:15] HITS file was successfully produced:
[2025-11-20 21:59:15] -rw-------. 1 boinc boinc 929926129 Nov 20 21:56 shared/HITS.pool.root.1
[2025-11-20 21:59:15]  *** Contents of shared directory: ***
[2025-11-20 21:59:15] total 1324280
[2025-11-20 21:59:15] -rw-r--r--. 2 boinc boinc 410390002 Nov 19 19:45 ATLAS.root_0
[2025-11-20 21:59:15] -rw-r--r--. 2 boinc boinc     15120 Nov 19 19:45 start_atlas.sh
[2025-11-20 21:59:15] -rw-r--r--. 2 boinc boinc    590098 Nov 19 19:45 input.tar.gz
[2025-11-20 21:59:15] -rw-------. 1 boinc boinc 929926129 Nov 20 21:56 HITS.pool.root.1
[2025-11-20 21:59:15] -rw-------. 1 boinc boinc  15134720 Nov 20 21:59 result.tar.gz
21:59:17 (32542): run_atlas exited; CPU time 347230.806365
21:59:17 (32542): called boinc_finish(0)

</stderr_txt>
]]>

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