Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
19:34:01 (10106): wrapper (7.7.26015): starting
19:34:01 (10106): wrapper: running run_atlas (--nthreads 8)
[2025-11-19 19:34:01] Arguments: --nthreads 8
[2025-11-19 19:34:01] Threads: 8
[2025-11-19 19:34:01] Checking for CVMFS
[2025-11-19 19:34:02] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-19 19:34:02] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-19 19:34:02] Running cvmfs_config stat atlas.cern.ch
[2025-11-19 19:34:04] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-19 19:34:04] 2.11.2.0 2602 70101 95760 153052 3 129 24931174 25165824 4251 130560 2 19497645 99.865 12807558 2473 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-11-19 19:34:04] CVMFS is ok
[2025-11-19 19:34:04] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-19 19:34:04] Checking for apptainer binary...
[2025-11-19 19:34:04] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-19 19:34:04] Running /usr/bin/apptainer --version
[2025-11-19 19:34:04] apptainer version 1.3.2-1.el7
[2025-11-19 19:34:04] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-19 19:34:21] cg-vwn253.simple-grid.lan
[2025-11-19 19:34:21] apptainer works
[2025-11-19 19:34:21] Set ATHENA_PROC_NUMBER=8
[2025-11-19 19:34:21] Set ATHENA_CORE_NUMBER=8
[2025-11-19 19:34:21] Starting ATLAS job with PandaID=6891555857
[2025-11-19 19:34:21] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/8 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-20 21:26:24]  *** The last 200 lines of the pilot log: ***
[2025-11-20 21:26:24] 2025-11-20 20:25:37,439 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-20 21:26:24] 2025-11-20 20:25:39,076 | INFO     | time since job start (92848s) is within the limit (172800.0s)
[2025-11-20 21:26:24] 2025-11-20 20:25:39,944 | INFO     | monitor loop #6238: job 0:6891555857 is in state 'finished'
[2025-11-20 21:26:24] 2025-11-20 20:25:39,945 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-20 21:26:24] 2025-11-20 20:25:41,085 | INFO     | time since job start (92850s) is within the limit (172800.0s)
[2025-11-20 21:26:24] 2025-11-20 20:25:42,453 | INFO     | monitor loop #6239: job 0:6891555857 is in state 'finished'
[2025-11-20 21:26:24] 2025-11-20 20:25:42,454 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-20 21:26:24] 2025-11-20 20:25:43,092 | INFO     | time since job start (92852s) is within the limit (172800.0s)
[2025-11-20 21:26:24] 2025-11-20 20:25:44,961 | INFO     | monitor loop #6240: job 0:6891555857 is in state 'finished'
[2025-11-20 21:26:24] 2025-11-20 20:25:44,962 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-20 21:26:24] 2025-11-20 20:25:45,099 | INFO     | time since job start (92854s) is within the limit (172800.0s)
[2025-11-20 21:26:24] 2025-11-20 20:25:47,115 | INFO     | time since job start (92856s) is within the limit (172800.0s)
[2025-11-20 21:26:24] 2025-11-20 20:25:47,481 | INFO     | monitor loop #6241: job 0:6891555857 is in state 'finished'
[2025-11-20 21:26:24] 2025-11-20 20:25:47,482 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-20 21:26:24] 2025-11-20 20:25:47,937 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-20 21:26:24] 2025-11-20 20:25:47,938 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2025-11-20 21:26:24] 2025-11-20 20:25:47,941 | INFO     | using path: /var/lib/boinc/slots/8/PanDA_Pilot-6891555857/memory_monitor_summary.json (trf name=prmon)
[2025-11-20 21:26:24] 2025-11-20 20:25:47,941 | INFO     | extracted standard info from prmon json
[2025-11-20 21:26:24] 2025-11-20 20:25:47,941 | INFO     | extracted standard memory fields from prmon json
[2025-11-20 21:26:24] 2025-11-20 20:25:47,942 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-20 21:26:24] 2025-11-20 20:25:47,983 | INFO     | fitting pss+swap vs Time
[2025-11-20 21:26:24] 2025-11-20 20:25:47,994 | INFO     | sum of square deviations: 1071846547016.5715
[2025-11-20 21:26:24] 2025-11-20 20:25:48,101 | INFO     | sum of deviations: 3824034524906.859
[2025-11-20 21:26:24] 2025-11-20 20:25:48,102 | INFO     | mean x: 1763624095.7142856
[2025-11-20 21:26:24] 2025-11-20 20:25:48,102 | INFO     | mean y: 2844937.501984127
[2025-11-20 21:26:24] 2025-11-20 20:25:48,102 | INFO     | intersect: -6289249252.41828
[2025-11-20 21:26:24] 2025-11-20 20:25:48,104 | INFO     | chi2: 22.119445807432907
[2025-11-20 21:26:24] 2025-11-20 20:25:48,107 | INFO     | sum of square deviations: 1061248805949.1744
[2025-11-20 21:26:24] 2025-11-20 20:25:48,170 | INFO     | sum of deviations: 4313656261426.209
[2025-11-20 21:26:24] 2025-11-20 20:25:48,171 | INFO     | mean x: 1763623943.2183146
[2025-11-20 21:26:24] 2025-11-20 20:25:48,171 | INFO     | mean y: 2851982.0358327804
[2025-11-20 21:26:24] 2025-11-20 20:25:48,171 | INFO     | intersect: -7165747334.936415
[2025-11-20 21:26:24] 2025-11-20 20:25:48,173 | INFO     | chi2: 19.045324135114196
[2025-11-20 21:26:24] 2025-11-20 20:25:48,173 | INFO     | current chi2=19.045324135114196 (change=13.897824109524926 %)
[2025-11-20 21:26:24] 2025-11-20 20:25:48,173 | INFO     | right removable region: 1506
[2025-11-20 21:26:24] 2025-11-20 20:25:48,176 | INFO     | sum of square deviations: 1061247685989.1747
[2025-11-20 21:26:24] 2025-11-20 20:25:48,256 | INFO     | sum of deviations: 3196165877595.173
[2025-11-20 21:26:24] 2025-11-20 20:25:48,257 | INFO     | mean x: 1763624248.2183146
[2025-11-20 21:26:24] 2025-11-20 20:25:48,257 | INFO     | mean y: 2853971.1818181816
[2025-11-20 21:26:24] 2025-11-20 20:25:48,257 | INFO     | intersect: -5308663516.652135
[2025-11-20 21:26:24] 2025-11-20 20:25:48,259 | INFO     | chi2: 17.54025039987032
[2025-11-20 21:26:24] 2025-11-20 20:25:48,259 | INFO     | current chi2=17.54025039987032 (change=20.70212539422582 %)
[2025-11-20 21:26:24] 2025-11-20 20:25:48,260 | INFO     | left removable region: 10
[2025-11-20 21:26:24] 2025-11-20 20:25:48,262 | INFO     | sum of square deviations: 1038177940300.7277
[2025-11-20 21:26:24] 2025-11-20 20:25:48,325 | INFO     | sum of deviations: 3256944356810.5435
[2025-11-20 21:26:24] 2025-11-20 20:25:48,325 | INFO     | mean x: 1763624217.7272727
[2025-11-20 21:26:24] 2025-11-20 20:25:48,325 | INFO     | mean y: 2870482.854278075
[2025-11-20 21:26:24] 2025-11-20 20:25:48,325 | INFO     | intersect: -5529924735.080507
[2025-11-20 21:26:24] 2025-11-20 20:25:48,327 | INFO     | chi2: 10.433510757371787
[2025-11-20 21:26:24] 2025-11-20 20:25:48,328 | INFO     | current memory leak: 3.14 B/s (using 1496 data points, chi2=10.43)
[2025-11-20 21:26:24] 2025-11-20 20:25:48,330 | INFO     | could have reported an average CPU frequency of 1999 MHz (51 samples)
[2025-11-20 21:26:24] 2025-11-20 20:25:48,330 | INFO     | ..............................
[2025-11-20 21:26:24] 2025-11-20 20:25:48,330 | INFO     | . Timing measurements:
[2025-11-20 21:26:24] 2025-11-20 20:25:48,330 | INFO     | . get job = 0 s
[2025-11-20 21:26:24] 2025-11-20 20:25:48,330 | INFO     | . initial setup = 8 s
[2025-11-20 21:26:24] 2025-11-20 20:25:48,331 | INFO     | . payload setup = 145 s
[2025-11-20 21:26:24] 2025-11-20 20:25:48,331 | INFO     | . stage-in = 0 s
[2025-11-20 21:26:24] 2025-11-20 20:25:48,331 | INFO     | . payload execution = 92389 s
[2025-11-20 21:26:24] 2025-11-20 20:25:48,331 | INFO     | . stage-out = 5 s
[2025-11-20 21:26:24] 2025-11-20 20:25:48,331 | INFO     | . log creation = 2 s
[2025-11-20 21:26:24] 2025-11-20 20:25:48,331 | INFO     | ..............................
[2025-11-20 21:26:24] 2025-11-20 20:25:48,460 | INFO     | 
[2025-11-20 21:26:24] 2025-11-20 20:25:48,460 | INFO     | job summary report
[2025-11-20 21:26:24] 2025-11-20 20:25:48,460 | INFO     | --------------------------------------------------
[2025-11-20 21:26:24] 2025-11-20 20:25:48,460 | INFO     | PanDA job id: 6891555857
[2025-11-20 21:26:24] 2025-11-20 20:25:48,460 | INFO     | task id: 47493068
[2025-11-20 21:26:24] 2025-11-20 20:25:48,460 | INFO     | errors: (none)
[2025-11-20 21:26:24] 2025-11-20 20:25:48,460 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-20 21:26:24] 2025-11-20 20:25:48,460 | INFO     | pilot state: finished 
[2025-11-20 21:26:24] 2025-11-20 20:25:48,461 | INFO     | transexitcode: 0
[2025-11-20 21:26:24] 2025-11-20 20:25:48,461 | INFO     | exeerrorcode: 0
[2025-11-20 21:26:24] 2025-11-20 20:25:48,461 | INFO     | exeerrordiag: 
[2025-11-20 21:26:24] 2025-11-20 20:25:48,461 | INFO     | exitcode: 0
[2025-11-20 21:26:24] 2025-11-20 20:25:48,461 | INFO     | exitmsg: OK
[2025-11-20 21:26:24] 2025-11-20 20:25:48,461 | INFO     | cpuconsumptiontime: 341494 s
[2025-11-20 21:26:24] 2025-11-20 20:25:48,461 | INFO     | nevents: 1000
[2025-11-20 21:26:24] 2025-11-20 20:25:48,461 | INFO     | neventsw: 0
[2025-11-20 21:26:24] 2025-11-20 20:25:48,461 | INFO     | pid: 20499
[2025-11-20 21:26:24] 2025-11-20 20:25:48,461 | INFO     | pgrp: 20499
[2025-11-20 21:26:24] 2025-11-20 20:25:48,461 | INFO     | corecount: 8
[2025-11-20 21:26:24] 2025-11-20 20:25:48,461 | INFO     | event service: False
[2025-11-20 21:26:24] 2025-11-20 20:25:48,462 | INFO     | sizes: {0: 2297025, 1: 2297224, 12: 2297224, 23: 2297252, 33: 2297280, 44: 2297336, 55: 2297492, 66: 2297520, 76: 2297548, 87: 2297604, 98: 2281432, 99: 2298202, 1
[2025-11-20 21:26:24] 2025-11-20 20:25:48,462 | INFO     | --------------------------------------------------
[2025-11-20 21:26:24] 2025-11-20 20:25:48,462 | INFO     | 
[2025-11-20 21:26:24] 2025-11-20 20:25:48,462 | INFO     | executing command: ls -lF /var/lib/boinc/slots/8
[2025-11-20 21:26:24] 2025-11-20 20:25:48,962 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-20 21:26:24] 2025-11-20 20:25:48,963 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-20 21:26:24] 2025-11-20 20:25:48,963 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-20 21:26:24] 2025-11-20 20:25:48,963 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-20 21:26:24] 2025-11-20 20:25:48,963 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-20 21:26:24] 2025-11-20 20:25:48,963 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-20 21:26:24] 2025-11-20 20:25:48,963 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-20 21:26:24] 2025-11-20 20:25:48,963 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-20 21:26:24] 2025-11-20 20:25:48,963 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-20 21:26:24] 2025-11-20 20:25:48,963 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-20 21:26:24] 2025-11-20 20:25:48,963 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-20 21:26:24] 2025-11-20 20:25:48,964 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-20 21:26:24] 2025-11-20 20:25:48,964 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-20 21:26:24] 2025-11-20 20:25:48,964 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-20 21:26:24] 2025-11-20 20:25:48,964 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-20 21:26:24] 2025-11-20 20:25:48,964 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-20 21:26:24] 2025-11-20 20:25:48,964 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-20 21:26:24] 2025-11-20 20:25:48,964 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-20 21:26:24] 2025-11-20 20:25:48,964 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-20 21:26:24] 2025-11-20 20:25:48,964 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-20 21:26:24] 2025-11-20 20:25:48,964 | INFO     | job 6891555857 has completed (purged errors)
[2025-11-20 21:26:24] 2025-11-20 20:25:48,965 | INFO     | overall cleanup function is called
[2025-11-20 21:26:24] 2025-11-20 20:25:49,986 | INFO     | --- collectZombieJob: --- 10, [20499]
[2025-11-20 21:26:24] 2025-11-20 20:25:49,987 | INFO     | zombie collector waiting for pid 20499
[2025-11-20 21:26:24] 2025-11-20 20:25:49,987 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-20 21:26:24] 2025-11-20 20:25:49,987 | INFO     | collected zombie processes
[2025-11-20 21:26:24] 2025-11-20 20:25:49,987 | INFO     | will attempt to kill all subprocesses of pid=20499
[2025-11-20 21:26:24] 2025-11-20 20:25:50,167 | INFO     | process IDs to be killed: [20499] (in reverse order)
[2025-11-20 21:26:24] 2025-11-20 20:25:51,344 | WARNING  | found no corresponding commands to process id(s)
[2025-11-20 21:26:24] 2025-11-20 20:25:51,344 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-20 21:26:24] 2025-11-20 20:25:51,348 | INFO     | did not find any defunct processes belonging to 20499
[2025-11-20 21:26:24] 2025-11-20 20:25:51,352 | INFO     | did not find any defunct processes belonging to 20499
[2025-11-20 21:26:24] 2025-11-20 20:25:51,410 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-20 21:26:24] 2025-11-20 20:25:51,410 | INFO     | ready for new job
[2025-11-20 21:26:24] 2025-11-20 20:25:51,410 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-20 21:26:24] 2025-11-20 20:25:51,417 | INFO     | ***************************************
[2025-11-20 21:26:24] 2025-11-20 20:25:51,418 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-20 21:26:24] 2025-11-20 20:25:51,418 | INFO     | ***************************************
[2025-11-20 21:26:24] 2025-11-20 20:25:51,418 | INFO     | 
[2025-11-20 21:26:24] 2025-11-20 20:25:51,418 | INFO     | pilot is running in a VM
[2025-11-20 21:26:24] 2025-11-20 20:25:51,419 | INFO     | architecture information:
[2025-11-20 21:26:24] 2025-11-20 20:25:51,428 | INFO     | executing command: cat /etc/os-release
[2025-11-20 21:26:24] 2025-11-20 20:25:51,566 | INFO     | cat /etc/os-release:
[2025-11-20 21:26:24] NAME="CentOS Linux"
[2025-11-20 21:26:24] VERSION="7 (Core)"
[2025-11-20 21:26:24] ID="centos"
[2025-11-20 21:26:24] ID_LIKE="rhel fedora"
[2025-11-20 21:26:24] VERSION_ID="7"
[2025-11-20 21:26:24] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-20 21:26:24] ANSI_COLOR="0;31"
[2025-11-20 21:26:24] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-20 21:26:24] HOME_URL="https://www.centos.org/"
[2025-11-20 21:26:24] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-20 21:26:24] 
[2025-11-20 21:26:24] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-20 21:26:24] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-20 21:26:24] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-20 21:26:24] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-20 21:26:24] 
[2025-11-20 21:26:24] 2025-11-20 20:25:51,566 | INFO     | ***************************************
[2025-11-20 21:26:24] 2025-11-20 20:25:52,070 | INFO     | executing command: df -mP /var/lib/boinc/slots/8
[2025-11-20 21:26:24] 2025-11-20 20:25:52,322 | INFO     | sufficient remaining disk space (494889074688 B)
[2025-11-20 21:26:24] 2025-11-20 20:25:52,322 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-20 21:26:24] 2025-11-20 20:25:52,322 | INFO     | current server update state: UPDATING_FINAL
[2025-11-20 21:26:24] 2025-11-20 20:25:52,322 | INFO     | update_server=False
[2025-11-20 21:26:24] 2025-11-20 20:25:52,322 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-20 21:26:24] 2025-11-20 20:25:52,365 | INFO     | all data control threads have been joined
[2025-11-20 21:26:24] 2025-11-20 20:25:52,418 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-20 21:26:24] 2025-11-20 20:25:52,493 | INFO     | all job control threads have been joined
[2025-11-20 21:26:24] 2025-11-20 20:25:52,508 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-20 21:26:24] 2025-11-20 20:25:52,509 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-20 21:26:24] 2025-11-20 20:25:52,509 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-20 21:26:24] 2025-11-20 20:25:52,509 | INFO     | will abort loop
[2025-11-20 21:26:24] 2025-11-20 20:25:52,537 | INFO     | all payload control threads have been joined
[2025-11-20 21:26:24] 2025-11-20 20:25:52,579 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-20 21:26:24] 2025-11-20 20:25:52,832 | INFO     | [monitor] cgroup control has ended
[2025-11-20 21:26:24] 2025-11-20 20:25:53,329 | INFO     | [job] retrieve thread has finished
[2025-11-20 21:26:24] 2025-11-20 20:25:53,371 | INFO     | [data] control thread has finished
[2025-11-20 21:26:24] 2025-11-20 20:25:53,474 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-20 21:26:24] 2025-11-20 20:25:53,499 | INFO     | [job] control thread has finished
[2025-11-20 21:26:24] 2025-11-20 20:25:53,516 | INFO     | [job] job monitor thread has finished
[2025-11-20 21:26:24] 2025-11-20 20:25:53,543 | INFO     | [payload] control thread has finished
[2025-11-20 21:26:24] 2025-11-20 20:25:54,100 | INFO     | [job] validate thread has finished
[2025-11-20 21:26:24] 2025-11-20 20:25:54,253 | INFO     | [payload] failed_post thread has finished
[2025-11-20 21:26:24] 2025-11-20 20:25:54,417 | INFO     | [job] create_data_payload thread has finished
[2025-11-20 21:26:24] 2025-11-20 20:25:54,480 | INFO     | [job] queue monitor thread has finished
[2025-11-20 21:26:24] 2025-11-20 20:25:54,526 | INFO     | [data] copytool_in thread has finished
[2025-11-20 21:26:24] 2025-11-20 20:25:54,586 | INFO     | [data] copytool_out thread has finished
[2025-11-20 21:26:24] 2025-11-20 20:25:54,591 | INFO     | [payload] validate_post thread has finished
[2025-11-20 21:26:24] 2025-11-20 20:25:54,620 | INFO     | [payload] execute_payloads thread has finished
[2025-11-20 21:26:24] 2025-11-20 20:25:54,625 | INFO     | [payload] validate_pre thread has finished
[2025-11-20 21:26:24] 2025-11-20 20:25:54,626 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-20 21:26:24] 2025-11-20 20:25:56,427 | INFO     | [data] queue_monitor thread has finished
[2025-11-20 21:26:24] 2025-11-20 20:25:57,283 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140442320017216)>', '<ExcThread(monitor, started 140442024777472)>']
[2025-11-20 21:26:24] 2025-11-20 20:26:02,309 | INFO     | all workflow threads have been joined
[2025-11-20 21:26:24] 2025-11-20 20:26:02,310 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-20 21:26:24] 2025-11-20 20:26:02,310 | INFO     | traces error code: 0
[2025-11-20 21:26:24] 2025-11-20 20:26:02,310 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-20 21:26:24] 2025-11-20 20:26:20,328 | INFO     | PID=13913 has CPU usage=1.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-20 21:26:24] 2025-11-20 20:26:20,329 | INFO     | .. there are 9 such processes running
[2025-11-20 21:26:24] 2025-11-20 20:26:20,329 | INFO     | found 0 job(s) in 20 queues
[2025-11-20 21:26:24] 2025-11-20 20:26:20,329 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-20 21:26:24] 2025-11-20 20:26:20,329 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-20 21:26:24] 2025-11-20 20:26:20,329 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-20 21:26:24] 2025-11-20 20:26:20,329 | INFO     | [monitor] control thread has ended
[2025-11-20 21:26:24] 2025-11-20 20:26:20,641 [wrapper] ==== pilot stdout END ====
[2025-11-20 21:26:24] 2025-11-20 20:26:20,727 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-20 21:26:24] 2025-11-20 20:26:20,783 [wrapper] pilotpid: 13913
[2025-11-20 21:26:24] 2025-11-20 20:26:20,819 [wrapper] Pilot exit status: 0
[2025-11-20 21:26:24] 2025-11-20 20:26:21,145 [wrapper] pandaids: 6891555857
[2025-11-20 21:26:24] 2025-11-20 20:26:21,618 [wrapper] cleanup supervisor_pilot  9622 13914
[2025-11-20 21:26:24] 2025-11-20 20:26:21,679 [wrapper] Test setup, not cleaning
[2025-11-20 21:26:24] 2025-11-20 20:26:21,764 [wrapper] apfmon messages muted
[2025-11-20 21:26:24] 2025-11-20 20:26:21,807 [wrapper] ==== wrapper stdout END ====
[2025-11-20 21:26:24] 2025-11-20 20:26:21,832 [wrapper] ==== wrapper stderr END ====
[2025-11-20 21:26:24]  *** Error codes and diagnostics ***
[2025-11-20 21:26:24]     "exeErrorCode": 0,
[2025-11-20 21:26:24]     "exeErrorDiag": "",
[2025-11-20 21:26:24]     "pilotErrorCode": 0,
[2025-11-20 21:26:24]     "pilotErrorDiag": "",
[2025-11-20 21:26:24]  *** Listing of results directory ***
[2025-11-20 21:26:24] total 1333228
[2025-11-20 21:26:24] -rw-r--r--. 1 boinc boinc    576529 Nov 18 16:15 pilot3.tar.gz
[2025-11-20 21:26:24] -rw-r--r--. 1 boinc boinc      5112 Nov 18 16:20 queuedata.json
[2025-11-20 21:26:24] -rwx------. 1 boinc boinc     36292 Nov 18 16:21 runpilot2-wrapper.sh
[2025-11-20 21:26:24] -rw-r--r--. 1 boinc boinc       100 Nov 19 19:34 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-20 21:26:24] -rwxr-xr-x. 1 boinc boinc      7986 Nov 19 19:34 run_atlas
[2025-11-20 21:26:24] -rw-r--r--. 1 boinc boinc       105 Nov 19 19:34 job.xml
[2025-11-20 21:26:24] -rw-r--r--. 2 boinc boinc 412942226 Nov 19 19:34 EVNT.47493065._000040.pool.root.1
[2025-11-20 21:26:24] drwxrwx--x. 2 boinc boinc        68 Nov 19 19:34 shared
[2025-11-20 21:26:24] -rw-r--r--. 2 boinc boinc    590095 Nov 19 19:34 input.tar.gz
[2025-11-20 21:26:24] -rw-r--r--. 1 boinc boinc      6387 Nov 19 19:34 init_data.xml
[2025-11-20 21:26:24] -rw-r--r--. 2 boinc boinc     15120 Nov 19 19:34 start_atlas.sh
[2025-11-20 21:26:24] -rw-r--r--. 1 boinc boinc         0 Nov 19 19:34 boinc_lockfile
[2025-11-20 21:26:24] -rw-r--r--. 1 boinc boinc      2771 Nov 19 19:34 pandaJob.out
[2025-11-20 21:26:24] -rw-------. 1 boinc boinc    989434 Nov 19 19:38 agis_schedconf.cvmfs.json
[2025-11-20 21:26:24] drwx------. 5 boinc boinc      4096 Nov 19 19:38 pilot3
[2025-11-20 21:26:24] -rw-r--r--. 1 boinc boinc       533 Nov 20 20:57 boinc_task_state.xml
[2025-11-20 21:26:24] -rw-------. 1 boinc boinc 918475805 Nov 20 21:22 HITS.47493068._000400.pool.root.1
[2025-11-20 21:26:24] -rw-------. 1 boinc boinc      1032 Nov 20 21:23 memory_monitor_summary.json
[2025-11-20 21:26:24] -rw-------. 1 boinc boinc   1526164 Nov 20 21:24 agis_ddmendpoints.agis.ALL.json
[2025-11-20 21:26:24] -rw-------. 1 boinc boinc   2581962 Nov 20 21:24 log.47493068._000400.job.log.tgz.1
[2025-11-20 21:26:24] -rw-------. 1 boinc boinc        95 Nov 20 21:25 pilot_heartbeat.json
[2025-11-20 21:26:24] -rw-------. 1 boinc boinc      8628 Nov 20 21:25 heartbeat.json
[2025-11-20 21:26:24] -rw-r--r--. 1 boinc boinc        29 Nov 20 21:25 wrapper_checkpoint.txt
[2025-11-20 21:26:24] -rw-r--r--. 1 boinc boinc      8192 Nov 20 21:25 boinc_mmap_file
[2025-11-20 21:26:24] -rw-------. 1 boinc boinc       820 Nov 20 21:26 pilotlog.txt
[2025-11-20 21:26:24] -rw-------. 1 boinc boinc  12368192 Nov 20 21:26 log.47493068._000400.job.log.1
[2025-11-20 21:26:24] -rw-------. 1 boinc boinc       353 Nov 20 21:26 output.list
[2025-11-20 21:26:24] -rw-r--r--. 1 boinc boinc       620 Nov 20 21:26 runtime_log
[2025-11-20 21:26:24] -rw-------. 1 boinc boinc  14970880 Nov 20 21:26 result.tar.gz
[2025-11-20 21:26:24] -rw-r--r--. 1 boinc boinc      8703 Nov 20 21:26 runtime_log.err
[2025-11-20 21:26:24] -rw-------. 1 boinc boinc       662 Nov 20 21:26 QlrMDmMhcf8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmUIFKDmxi6ncm.diag
[2025-11-20 21:26:24] -rw-r--r--. 1 boinc boinc     21431 Nov 20 21:26 stderr.txt
[2025-11-20 21:26:24] HITS file was successfully produced:
[2025-11-20 21:26:24] -rw-------. 1 boinc boinc 918475805 Nov 20 21:22 shared/HITS.pool.root.1
[2025-11-20 21:26:24]  *** Contents of shared directory: ***
[2025-11-20 21:26:24] total 1315432
[2025-11-20 21:26:24] -rw-r--r--. 2 boinc boinc 412942226 Nov 19 19:34 ATLAS.root_0
[2025-11-20 21:26:24] -rw-r--r--. 2 boinc boinc    590095 Nov 19 19:34 input.tar.gz
[2025-11-20 21:26:24] -rw-r--r--. 2 boinc boinc     15120 Nov 19 19:34 start_atlas.sh
[2025-11-20 21:26:24] -rw-------. 1 boinc boinc 918475805 Nov 20 21:22 HITS.pool.root.1
[2025-11-20 21:26:24] -rw-------. 1 boinc boinc  14970880 Nov 20 21:26 result.tar.gz
21:26:25 (10106): run_atlas exited; CPU time 342119.075699
21:26:25 (10106): called boinc_finish(0)

</stderr_txt>
]]>

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