Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
20:45:08 (2074): wrapper (7.7.26015): starting
20:45:08 (2074): wrapper: running run_atlas (--nthreads 8)
[2025-11-20 20:45:08] Arguments: --nthreads 8
[2025-11-20 20:45:08] Threads: 8
[2025-11-20 20:45:08] Checking for CVMFS
[2025-11-20 20:45:09] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-20 20:45:10] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-20 20:45:10] Running cvmfs_config stat atlas.cern.ch
[2025-11-20 20:45:11] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-20 20:45:11] 2.11.2.0 27053 163972 136272 153088 1 85 22408130 25165824 4632 130560 4 55826947 99.903 27629498 2720 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-11-20 20:45:11] CVMFS is ok
[2025-11-20 20:45:11] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-20 20:45:11] Checking for apptainer binary...
[2025-11-20 20:45:11] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-20 20:45:11] Running /usr/bin/apptainer --version
[2025-11-20 20:45:11] apptainer version 1.3.2-1.el7
[2025-11-20 20:45:11] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-20 20:45:29] cg-vwn373.simple-grid.lan
[2025-11-20 20:45:29] apptainer works
[2025-11-20 20:45:29] Set ATHENA_PROC_NUMBER=8
[2025-11-20 20:45:29] Set ATHENA_CORE_NUMBER=8
[2025-11-20 20:45:29] Starting ATLAS job with PandaID=6891570613
[2025-11-20 20:45:29] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/14 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-21 23:14:48]  *** The last 200 lines of the pilot log: ***
[2025-11-21 23:14:48] 2025-11-21 22:14:00,325 | INFO     | chi2: 15.491045817937943
[2025-11-21 23:14:48] 2025-11-21 22:14:00,326 | INFO     | current chi2=15.491045817937943 (change=16.771727632336 %)
[2025-11-21 23:14:48] 2025-11-21 22:14:00,326 | INFO     | right removable region: 1544
[2025-11-21 23:14:48] 2025-11-21 22:14:00,328 | INFO     | sum of square deviations: 1143575539568.7358
[2025-11-21 23:14:48] 2025-11-21 22:14:00,393 | INFO     | sum of deviations: 4351262961842.114
[2025-11-21 23:14:48] 2025-11-21 22:14:00,394 | INFO     | mean x: 1763716109.3935275
[2025-11-21 23:14:48] 2025-11-21 22:14:00,394 | INFO     | mean y: 2875790.131391586
[2025-11-21 23:14:48] 2025-11-21 22:14:00,394 | INFO     | intersect: -6707999282.364904
[2025-11-21 23:14:48] 2025-11-21 22:14:00,396 | INFO     | chi2: 13.559577938817423
[2025-11-21 23:14:48] 2025-11-21 22:14:00,396 | INFO     | current chi2=13.559577938817423 (change=27.14886656808767 %)
[2025-11-21 23:14:48] 2025-11-21 22:14:00,398 | INFO     | sum of square deviations: 1132508126558.9946
[2025-11-21 23:14:48] 2025-11-21 22:14:00,461 | INFO     | sum of deviations: 3769081304256.023
[2025-11-21 23:14:48] 2025-11-21 22:14:00,462 | INFO     | mean x: 1763716261.898052
[2025-11-21 23:14:48] 2025-11-21 22:14:00,462 | INFO     | mean y: 2883811.809090909
[2025-11-21 23:14:48] 2025-11-21 22:14:00,462 | INFO     | intersect: -5866910702.540455
[2025-11-21 23:14:48] 2025-11-21 22:14:00,464 | INFO     | chi2: 9.847205816461594
[2025-11-21 23:14:48] 2025-11-21 22:14:00,464 | INFO     | current chi2=9.847205816461594 (change=27.378227693417408 %)
[2025-11-21 23:14:48] 2025-11-21 22:14:00,466 | INFO     | sum of square deviations: 1121512342799.188
[2025-11-21 23:14:48] 2025-11-21 22:14:00,527 | INFO     | sum of deviations: 3213672687397.676
[2025-11-21 23:14:48] 2025-11-21 22:14:00,528 | INFO     | mean x: 1763716414.4026058
[2025-11-21 23:14:48] 2025-11-21 22:14:00,528 | INFO     | mean y: 2891515.680130293
[2025-11-21 23:14:48] 2025-11-21 22:14:00,528 | INFO     | intersect: -5051004953.380397
[2025-11-21 23:14:48] 2025-11-21 22:14:00,530 | INFO     | chi2: 6.519525489875052
[2025-11-21 23:14:48] 2025-11-21 22:14:00,530 | INFO     | current chi2=6.519525489875052 (change=33.793142832697285 %)
[2025-11-21 23:14:48] 2025-11-21 22:14:00,533 | INFO     | sum of square deviations: 1110588049119.634
[2025-11-21 23:14:48] 2025-11-21 22:14:00,593 | INFO     | sum of deviations: 2822492105886.1406
[2025-11-21 23:14:48] 2025-11-21 22:14:00,594 | INFO     | mean x: 1763716566.9065359
[2025-11-21 23:14:48] 2025-11-21 22:14:00,594 | INFO     | mean y: 2896972.966013072
[2025-11-21 23:14:48] 2025-11-21 22:14:00,594 | INFO     | intersect: -4479481611.118731
[2025-11-21 23:14:48] 2025-11-21 22:14:00,596 | INFO     | chi2: 4.722078558396621
[2025-11-21 23:14:48] 2025-11-21 22:14:00,597 | INFO     | current chi2=4.722078558396621 (change=27.570210965044932 %)
[2025-11-21 23:14:48] 2025-11-21 22:14:00,599 | INFO     | sum of square deviations: 1099735386344.1213
[2025-11-21 23:14:48] 2025-11-21 22:14:00,631 | INFO     | monitor loop #6379: job 0:6891570613 is in state 'finished'
[2025-11-21 23:14:48] 2025-11-21 22:14:00,642 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-21 23:14:48] 2025-11-21 22:14:00,663 | INFO     | sum of deviations: 2714908115356.469
[2025-11-21 23:14:48] 2025-11-21 22:14:00,664 | INFO     | mean x: 1763716719.4072132
[2025-11-21 23:14:48] 2025-11-21 22:14:00,664 | INFO     | mean y: 2898484.575737705
[2025-11-21 23:14:48] 2025-11-21 22:14:00,664 | INFO     | intersect: -4351175135.467077
[2025-11-21 23:14:48] 2025-11-21 22:14:00,667 | INFO     | chi2: 4.651925687509574
[2025-11-21 23:14:48] 2025-11-21 22:14:00,667 | INFO     | current chi2=4.651925687509574 (change=1.4856354043984288 %)
[2025-11-21 23:14:48] 2025-11-21 22:14:00,667 | INFO     | left removable region: 50
[2025-11-21 23:14:48] 2025-11-21 22:14:00,669 | INFO     | sum of square deviations: 1034023872627.7081
[2025-11-21 23:14:48] 2025-11-21 22:14:00,736 | INFO     | sum of deviations: 3044773815880.961
[2025-11-21 23:14:48] 2025-11-21 22:14:00,736 | INFO     | mean x: 1763717298.9170012
[2025-11-21 23:14:48] 2025-11-21 22:14:00,736 | INFO     | mean y: 2911852.4190093707
[2025-11-21 23:14:48] 2025-11-21 22:14:00,736 | INFO     | intersect: -5190508137.693973
[2025-11-21 23:14:48] 2025-11-21 22:14:00,738 | INFO     | chi2: 0.6950355981783791
[2025-11-21 23:14:48] 2025-11-21 22:14:00,739 | INFO     | current memory leak: 2.94 B/s (using 1494 data points, chi2=0.70)
[2025-11-21 23:14:48] 2025-11-21 22:14:00,742 | INFO     | could have reported an average CPU frequency of 1999 MHz (52 samples)
[2025-11-21 23:14:48] 2025-11-21 22:14:00,742 | INFO     | ..............................
[2025-11-21 23:14:48] 2025-11-21 22:14:00,742 | INFO     | . Timing measurements:
[2025-11-21 23:14:48] 2025-11-21 22:14:00,742 | INFO     | . get job = 0 s
[2025-11-21 23:14:48] 2025-11-21 22:14:00,742 | INFO     | . initial setup = 11 s
[2025-11-21 23:14:48] 2025-11-21 22:14:00,742 | INFO     | . payload setup = 155 s
[2025-11-21 23:14:48] 2025-11-21 22:14:00,742 | INFO     | . stage-in = 0 s
[2025-11-21 23:14:48] 2025-11-21 22:14:00,743 | INFO     | . payload execution = 94678 s
[2025-11-21 23:14:48] 2025-11-21 22:14:00,743 | INFO     | . stage-out = 4 s
[2025-11-21 23:14:48] 2025-11-21 22:14:00,743 | INFO     | . log creation = 1 s
[2025-11-21 23:14:48] 2025-11-21 22:14:00,743 | INFO     | ..............................
[2025-11-21 23:14:48] 2025-11-21 22:14:00,892 | INFO     | 
[2025-11-21 23:14:48] 2025-11-21 22:14:00,892 | INFO     | job summary report
[2025-11-21 23:14:48] 2025-11-21 22:14:00,892 | INFO     | --------------------------------------------------
[2025-11-21 23:14:48] 2025-11-21 22:14:00,892 | INFO     | PanDA job id: 6891570613
[2025-11-21 23:14:48] 2025-11-21 22:14:00,892 | INFO     | task id: 47493068
[2025-11-21 23:14:48] 2025-11-21 22:14:00,892 | INFO     | errors: (none)
[2025-11-21 23:14:48] 2025-11-21 22:14:00,893 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-21 23:14:48] 2025-11-21 22:14:00,893 | INFO     | pilot state: finished 
[2025-11-21 23:14:48] 2025-11-21 22:14:00,893 | INFO     | transexitcode: 0
[2025-11-21 23:14:48] 2025-11-21 22:14:00,893 | INFO     | exeerrorcode: 0
[2025-11-21 23:14:48] 2025-11-21 22:14:00,893 | INFO     | exeerrordiag: 
[2025-11-21 23:14:48] 2025-11-21 22:14:00,893 | INFO     | exitcode: 0
[2025-11-21 23:14:48] 2025-11-21 22:14:00,893 | INFO     | exitmsg: OK
[2025-11-21 23:14:48] 2025-11-21 22:14:00,893 | INFO     | cpuconsumptiontime: 345379 s
[2025-11-21 23:14:48] 2025-11-21 22:14:00,893 | INFO     | nevents: 1000
[2025-11-21 23:14:48] 2025-11-21 22:14:00,894 | INFO     | neventsw: 0
[2025-11-21 23:14:48] 2025-11-21 22:14:00,894 | INFO     | pid: 12468
[2025-11-21 23:14:48] 2025-11-21 22:14:00,894 | INFO     | pgrp: 12468
[2025-11-21 23:14:48] 2025-11-21 22:14:00,894 | INFO     | corecount: 8
[2025-11-21 23:14:48] 2025-11-21 22:14:00,894 | INFO     | event service: False
[2025-11-21 23:14:48] 2025-11-21 22:14:00,894 | INFO     | sizes: {0: 2297968, 1: 2298654, 2: 2298853, 3: 2298853, 13: 2298881, 24: 2298937, 35: 2299093, 46: 2299121, 57: 2299149, 68: 2299177, 78: 2299205, 89: 2299541, 98:
[2025-11-21 23:14:48] 2025-11-21 22:14:00,894 | INFO     | --------------------------------------------------
[2025-11-21 23:14:48] 2025-11-21 22:14:00,894 | INFO     | 
[2025-11-21 23:14:48] 2025-11-21 22:14:00,895 | INFO     | executing command: ls -lF /var/lib/boinc/slots/14
[2025-11-21 23:14:48] 2025-11-21 22:14:00,914 | INFO     | time since job start (95043s) is within the limit (172800.0s)
[2025-11-21 23:14:48] 2025-11-21 22:14:00,984 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-21 23:14:48] 2025-11-21 22:14:00,985 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-21 23:14:48] 2025-11-21 22:14:00,985 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-21 23:14:48] 2025-11-21 22:14:00,985 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-21 23:14:48] 2025-11-21 22:14:00,985 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-21 23:14:48] 2025-11-21 22:14:00,985 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-21 23:14:48] 2025-11-21 22:14:00,985 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-21 23:14:48] 2025-11-21 22:14:00,985 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-21 23:14:48] 2025-11-21 22:14:00,985 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-21 23:14:48] 2025-11-21 22:14:00,986 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-21 23:14:48] 2025-11-21 22:14:00,986 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-21 23:14:48] 2025-11-21 22:14:00,986 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-21 23:14:48] 2025-11-21 22:14:00,986 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-21 23:14:48] 2025-11-21 22:14:00,986 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-21 23:14:48] 2025-11-21 22:14:00,986 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-21 23:14:48] 2025-11-21 22:14:00,986 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-21 23:14:48] 2025-11-21 22:14:00,986 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-21 23:14:48] 2025-11-21 22:14:00,986 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-21 23:14:48] 2025-11-21 22:14:00,987 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-21 23:14:48] 2025-11-21 22:14:00,987 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-21 23:14:48] 2025-11-21 22:14:00,987 | INFO     | job 6891570613 has completed (purged errors)
[2025-11-21 23:14:48] 2025-11-21 22:14:00,987 | INFO     | overall cleanup function is called
[2025-11-21 23:14:48] 2025-11-21 22:14:02,017 | INFO     | --- collectZombieJob: --- 10, [12468]
[2025-11-21 23:14:48] 2025-11-21 22:14:02,017 | INFO     | zombie collector waiting for pid 12468
[2025-11-21 23:14:48] 2025-11-21 22:14:02,017 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-21 23:14:48] 2025-11-21 22:14:02,017 | INFO     | collected zombie processes
[2025-11-21 23:14:48] 2025-11-21 22:14:02,017 | INFO     | will attempt to kill all subprocesses of pid=12468
[2025-11-21 23:14:48] 2025-11-21 22:14:02,106 | INFO     | PID=5880 has CPU usage=19.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-21 23:14:48] 2025-11-21 22:14:02,106 | INFO     | .. there are 7 such processes running
[2025-11-21 23:14:48] 2025-11-21 22:14:02,155 | INFO     | process IDs to be killed: [12468] (in reverse order)
[2025-11-21 23:14:48] 2025-11-21 22:14:02,261 | WARNING  | found no corresponding commands to process id(s)
[2025-11-21 23:14:48] 2025-11-21 22:14:02,262 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-21 23:14:48] 2025-11-21 22:14:02,265 | INFO     | did not find any defunct processes belonging to 12468
[2025-11-21 23:14:48] 2025-11-21 22:14:02,268 | INFO     | did not find any defunct processes belonging to 12468
[2025-11-21 23:14:48] 2025-11-21 22:14:02,271 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-21 23:14:48] 2025-11-21 22:14:02,271 | INFO     | ready for new job
[2025-11-21 23:14:48] 2025-11-21 22:14:02,271 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-21 23:14:48] 2025-11-21 22:14:02,279 | INFO     | ***************************************
[2025-11-21 23:14:48] 2025-11-21 22:14:02,279 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-21 23:14:48] 2025-11-21 22:14:02,279 | INFO     | ***************************************
[2025-11-21 23:14:48] 2025-11-21 22:14:02,279 | INFO     | 
[2025-11-21 23:14:48] 2025-11-21 22:14:02,280 | INFO     | pilot is running in a VM
[2025-11-21 23:14:48] 2025-11-21 22:14:02,280 | INFO     | architecture information:
[2025-11-21 23:14:48] 2025-11-21 22:14:02,281 | INFO     | executing command: cat /etc/os-release
[2025-11-21 23:14:48] 2025-11-21 22:14:02,302 | INFO     | cat /etc/os-release:
[2025-11-21 23:14:48] NAME="CentOS Linux"
[2025-11-21 23:14:48] VERSION="7 (Core)"
[2025-11-21 23:14:48] ID="centos"
[2025-11-21 23:14:48] ID_LIKE="rhel fedora"
[2025-11-21 23:14:48] VERSION_ID="7"
[2025-11-21 23:14:48] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-21 23:14:48] ANSI_COLOR="0;31"
[2025-11-21 23:14:48] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-21 23:14:48] HOME_URL="https://www.centos.org/"
[2025-11-21 23:14:48] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-21 23:14:48] 
[2025-11-21 23:14:48] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-21 23:14:48] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-21 23:14:48] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-21 23:14:48] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-21 23:14:48] 
[2025-11-21 23:14:48] 2025-11-21 22:14:02,303 | INFO     | ***************************************
[2025-11-21 23:14:48] 2025-11-21 22:14:02,806 | INFO     | executing command: df -mP /var/lib/boinc/slots/14
[2025-11-21 23:14:48] 2025-11-21 22:14:02,857 | INFO     | sufficient remaining disk space (494763245568 B)
[2025-11-21 23:14:48] 2025-11-21 22:14:02,858 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-21 23:14:48] 2025-11-21 22:14:02,858 | INFO     | current server update state: UPDATING_FINAL
[2025-11-21 23:14:48] 2025-11-21 22:14:02,858 | INFO     | update_server=False
[2025-11-21 23:14:48] 2025-11-21 22:14:02,858 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-21 23:14:48] 2025-11-21 22:14:02,859 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-21 23:14:48] 2025-11-21 22:14:02,859 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-11-21 23:14:48] 2025-11-21 22:14:02,859 | INFO     | found 0 job(s) in 20 queues
[2025-11-21 23:14:48] 2025-11-21 22:14:02,859 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-21 23:14:48] 2025-11-21 22:14:02,859 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-21 23:14:48] 2025-11-21 22:14:02,898 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-21 23:14:48] 2025-11-21 22:14:03,146 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-21 23:14:48] 2025-11-21 22:14:03,146 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-21 23:14:48] 2025-11-21 22:14:03,146 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-21 23:14:48] 2025-11-21 22:14:03,146 | INFO     | will abort loop
[2025-11-21 23:14:48] 2025-11-21 22:14:03,193 | INFO     | all payload control threads have been joined
[2025-11-21 23:14:48] 2025-11-21 22:14:03,226 | INFO     | all job control threads have been joined
[2025-11-21 23:14:48] 2025-11-21 22:14:03,806 | INFO     | all data control threads have been joined
[2025-11-21 23:14:48] 2025-11-21 22:14:03,865 | INFO     | [job] retrieve thread has finished
[2025-11-21 23:14:48] 2025-11-21 22:14:03,865 | INFO     | [job] queue monitor thread has finished
[2025-11-21 23:14:48] 2025-11-21 22:14:04,149 | INFO     | [job] job monitor thread has finished
[2025-11-21 23:14:48] 2025-11-21 22:14:04,196 | INFO     | [payload] execute_payloads thread has finished
[2025-11-21 23:14:48] 2025-11-21 22:14:04,198 | INFO     | [payload] control thread has finished
[2025-11-21 23:14:48] 2025-11-21 22:14:04,230 | INFO     | [job] control thread has finished
[2025-11-21 23:14:48] 2025-11-21 22:14:04,236 | INFO     | [job] create_data_payload thread has finished
[2025-11-21 23:14:48] 2025-11-21 22:14:04,255 | INFO     | [payload] validate_post thread has finished
[2025-11-21 23:14:48] 2025-11-21 22:14:04,294 | INFO     | [job] validate thread has finished
[2025-11-21 23:14:48] 2025-11-21 22:14:04,810 | INFO     | [data] control thread has finished
[2025-11-21 23:14:48] 2025-11-21 22:14:04,905 | INFO     | [data] copytool_out thread has finished
[2025-11-21 23:14:48] 2025-11-21 22:14:05,042 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-21 23:14:48] 2025-11-21 22:14:05,067 | INFO     | [payload] validate_pre thread has finished
[2025-11-21 23:14:48] 2025-11-21 22:14:05,085 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-21 23:14:48] 2025-11-21 22:14:05,155 | INFO     | [data] copytool_in thread has finished
[2025-11-21 23:14:48] 2025-11-21 22:14:05,189 | INFO     | [payload] failed_post thread has finished
[2025-11-21 23:14:48] 2025-11-21 22:14:09,049 | INFO     | [data] queue_monitor thread has finished
[2025-11-21 23:14:48] 2025-11-21 22:14:42,609 | INFO     | [monitor] cgroup control has ended
[2025-11-21 23:14:48] 2025-11-21 22:14:43,164 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139691731560256)>', '<ExcThread(monitor, started 139691294701312)>']
[2025-11-21 23:14:48] 2025-11-21 22:14:44,034 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-21 23:14:48] 2025-11-21 22:14:44,034 | INFO     | [monitor] control thread has ended
[2025-11-21 23:14:48] 2025-11-21 22:14:48,190 | INFO     | all workflow threads have been joined
[2025-11-21 23:14:48] 2025-11-21 22:14:48,191 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-21 23:14:48] 2025-11-21 22:14:48,191 | INFO     | traces error code: 0
[2025-11-21 23:14:48] 2025-11-21 22:14:48,191 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-21 23:14:48] 2025-11-21 22:14:48,426 [wrapper] ==== pilot stdout END ====
[2025-11-21 23:14:48] 2025-11-21 22:14:48,430 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-21 23:14:48] 2025-11-21 22:14:48,433 [wrapper] pilotpid: 5880
[2025-11-21 23:14:48] 2025-11-21 22:14:48,436 [wrapper] Pilot exit status: 0
[2025-11-21 23:14:48] 2025-11-21 22:14:48,457 [wrapper] pandaids: 6891570613
[2025-11-21 23:14:48] 2025-11-21 22:14:48,497 [wrapper] cleanup supervisor_pilot 25961 5881
[2025-11-21 23:14:48] 2025-11-21 22:14:48,501 [wrapper] Test setup, not cleaning
[2025-11-21 23:14:48] 2025-11-21 22:14:48,504 [wrapper] apfmon messages muted
[2025-11-21 23:14:48] 2025-11-21 22:14:48,539 [wrapper] ==== wrapper stdout END ====
[2025-11-21 23:14:48] 2025-11-21 22:14:48,554 [wrapper] ==== wrapper stderr END ====
[2025-11-21 23:14:48]  *** Error codes and diagnostics ***
[2025-11-21 23:14:48]     "exeErrorCode": 0,
[2025-11-21 23:14:48]     "exeErrorDiag": "",
[2025-11-21 23:14:48]     "pilotErrorCode": 0,
[2025-11-21 23:14:48]     "pilotErrorDiag": "",
[2025-11-21 23:14:48]  *** Listing of results directory ***
[2025-11-21 23:14:48] total 1344920
[2025-11-21 23:14:48] -rw-r--r--. 1 boinc boinc    576529 Nov 18 16:15 pilot3.tar.gz
[2025-11-21 23:14:48] -rw-r--r--. 1 boinc boinc      5112 Nov 18 16:39 queuedata.json
[2025-11-21 23:14:48] -rwx------. 1 boinc boinc     36292 Nov 18 16:40 runpilot2-wrapper.sh
[2025-11-21 23:14:48] -rw-r--r--. 1 boinc boinc       100 Nov 20 20:45 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-21 23:14:48] -rwxr-xr-x. 1 boinc boinc      7986 Nov 20 20:45 run_atlas
[2025-11-21 23:14:48] -rw-r--r--. 1 boinc boinc       105 Nov 20 20:45 job.xml
[2025-11-21 23:14:48] -rw-r--r--. 2 boinc boinc 410044171 Nov 20 20:45 EVNT.47493065._000241.pool.root.1
[2025-11-21 23:14:48] -rw-r--r--. 1 boinc boinc      6392 Nov 20 20:45 init_data.xml
[2025-11-21 23:14:48] -rw-r--r--. 2 boinc boinc     15120 Nov 20 20:45 start_atlas.sh
[2025-11-21 23:14:48] drwxrwx--x. 2 boinc boinc        68 Nov 20 20:45 shared
[2025-11-21 23:14:48] -rw-r--r--. 2 boinc boinc    590098 Nov 20 20:45 input.tar.gz
[2025-11-21 23:14:48] -rw-r--r--. 1 boinc boinc         0 Nov 20 20:45 boinc_lockfile
[2025-11-21 23:14:48] -rw-r--r--. 1 boinc boinc      2773 Nov 20 20:45 pandaJob.out
[2025-11-21 23:14:48] -rw-------. 1 boinc boinc    989440 Nov 20 20:49 agis_schedconf.cvmfs.json
[2025-11-21 23:14:48] drwx------. 5 boinc boinc      4096 Nov 20 20:49 pilot3
[2025-11-21 23:14:48] -rw-r--r--. 1 boinc boinc       533 Nov 21 23:01 boinc_task_state.xml
[2025-11-21 23:14:48] -rw-------. 1 boinc boinc 932585399 Nov 21 23:12 HITS.47493068._002405.pool.root.1
[2025-11-21 23:14:48] -rw-------. 1 boinc boinc      1035 Nov 21 23:13 memory_monitor_summary.json
[2025-11-21 23:14:48] -rw-------. 1 boinc boinc        95 Nov 21 23:13 pilot_heartbeat.json
[2025-11-21 23:14:48] -rw-------. 1 boinc boinc   1526164 Nov 21 23:13 agis_ddmendpoints.agis.ALL.json
[2025-11-21 23:14:48] -rw-------. 1 boinc boinc   2618304 Nov 21 23:13 log.47493068._002405.job.log.tgz.1
[2025-11-21 23:14:48] -rw-------. 1 boinc boinc      8629 Nov 21 23:14 heartbeat.json
[2025-11-21 23:14:48] -rw-r--r--. 1 boinc boinc      8192 Nov 21 23:14 boinc_mmap_file
[2025-11-21 23:14:48] -rw-r--r--. 1 boinc boinc        29 Nov 21 23:14 wrapper_checkpoint.txt
[2025-11-21 23:14:48] -rw-------. 1 boinc boinc      4802 Nov 21 23:14 pilotlog.txt
[2025-11-21 23:14:48] -rw-------. 1 boinc boinc  12707584 Nov 21 23:14 log.47493068._002405.job.log.1
[2025-11-21 23:14:48] -rw-------. 1 boinc boinc       353 Nov 21 23:14 output.list
[2025-11-21 23:14:48] -rw-r--r--. 1 boinc boinc       620 Nov 21 23:14 runtime_log
[2025-11-21 23:14:48] -rw-------. 1 boinc boinc  15349760 Nov 21 23:14 result.tar.gz
[2025-11-21 23:14:48] -rw-------. 1 boinc boinc       662 Nov 21 23:14 Z85KDmkzcf8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmTdFKDmnLR2fn.diag
[2025-11-21 23:14:48] -rw-r--r--. 1 boinc boinc      8717 Nov 21 23:14 runtime_log.err
[2025-11-21 23:14:48] -rw-r--r--. 1 boinc boinc     21053 Nov 21 23:14 stderr.txt
[2025-11-21 23:14:48] HITS file was successfully produced:
[2025-11-21 23:14:48] -rw-------. 1 boinc boinc 932585399 Nov 21 23:12 shared/HITS.pool.root.1
[2025-11-21 23:14:48]  *** Contents of shared directory: ***
[2025-11-21 23:14:48] total 1326752
[2025-11-21 23:14:48] -rw-r--r--. 2 boinc boinc 410044171 Nov 20 20:45 ATLAS.root_0
[2025-11-21 23:14:48] -rw-r--r--. 2 boinc boinc     15120 Nov 20 20:45 start_atlas.sh
[2025-11-21 23:14:48] -rw-r--r--. 2 boinc boinc    590098 Nov 20 20:45 input.tar.gz
[2025-11-21 23:14:48] -rw-------. 1 boinc boinc 932585399 Nov 21 23:12 HITS.pool.root.1
[2025-11-21 23:14:48] -rw-------. 1 boinc boinc  15349760 Nov 21 23:14 result.tar.gz
23:14:49 (2074): run_atlas exited; CPU time 345914.767971
23:14:49 (2074): called boinc_finish(0)

</stderr_txt>
]]>

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