Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
19:23:35 (9842): wrapper (7.7.26015): starting
19:23:35 (9842): wrapper: running run_atlas (--nthreads 8)
[2025-11-19 19:23:35] Arguments: --nthreads 8
[2025-11-19 19:23:35] Threads: 8
[2025-11-19 19:23:35] Checking for CVMFS
[2025-11-19 19:23:36] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-19 19:23:37] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-19 19:23:37] Running cvmfs_config stat atlas.cern.ch
[2025-11-19 19:23:38] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-19 19:23:38] 2.11.2.0 16343 275483 136452 153052 1 129 24865128 25165824 4189 130560 3 135702203 99.870 74903425 2918 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-11-19 19:23:38] CVMFS is ok
[2025-11-19 19:23:38] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-19 19:23:38] Checking for apptainer binary...
[2025-11-19 19:23:38] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-19 19:23:38] Running /usr/bin/apptainer --version
[2025-11-19 19:23:38] apptainer version 1.3.2-1.el7
[2025-11-19 19:23:38] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-19 19:23:54] cg-vwn436.simple-grid.lan
[2025-11-19 19:23:54] apptainer works
[2025-11-19 19:23:54] Set ATHENA_PROC_NUMBER=8
[2025-11-19 19:23:54] Set ATHENA_CORE_NUMBER=8
[2025-11-19 19:23:54] Starting ATLAS job with PandaID=6891570836
[2025-11-19 19:23:54] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/8 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-20 20:44:00]  *** The last 200 lines of the pilot log: ***
[2025-11-20 20:44:00] 2025-11-20 19:43:21,521 | INFO     | sum of square deviations: 1007264415221.0443
[2025-11-20 20:44:00] 2025-11-20 19:43:21,612 | INFO     | sum of deviations: 5261482280447.908
[2025-11-20 20:44:00] 2025-11-20 19:43:21,612 | INFO     | mean x: 1763622515.2464552
[2025-11-20 20:44:00] 2025-11-20 19:43:21,612 | INFO     | mean y: 2852288.887913572
[2025-11-20 20:44:00] 2025-11-20 19:43:21,612 | INFO     | intersect: -9209494015.763243
[2025-11-20 20:44:00] 2025-11-20 19:43:21,614 | INFO     | chi2: 18.01945893790435
[2025-11-20 20:44:00] 2025-11-20 19:43:21,617 | INFO     | sum of square deviations: 997097513188.2495
[2025-11-20 20:44:00] 2025-11-20 19:43:21,711 | INFO     | sum of deviations: 5742028259573.936
[2025-11-20 20:44:00] 2025-11-20 19:43:21,712 | INFO     | mean x: 1763622362.7506776
[2025-11-20 20:44:00] 2025-11-20 19:43:21,712 | INFO     | mean y: 2859495.562330623
[2025-11-20 20:44:00] 2025-11-20 19:43:21,712 | INFO     | intersect: -10153388325.927359
[2025-11-20 20:44:00] 2025-11-20 19:43:21,714 | INFO     | chi2: 15.067024800132673
[2025-11-20 20:44:00] 2025-11-20 19:43:21,714 | INFO     | current chi2=15.067024800132673 (change=16.384699162976325 %)
[2025-11-20 20:44:00] 2025-11-20 19:43:21,714 | INFO     | right removable region: 1475
[2025-11-20 20:44:00] 2025-11-20 19:43:21,716 | INFO     | sum of square deviations: 997096387128.2496
[2025-11-20 20:44:00] 2025-11-20 19:43:21,788 | INFO     | sum of deviations: 4630986207627.092
[2025-11-20 20:44:00] 2025-11-20 19:43:21,789 | INFO     | mean x: 1763622667.7506776
[2025-11-20 20:44:00] 2025-11-20 19:43:21,789 | INFO     | mean y: 2861744.9051490515
[2025-11-20 20:44:00] 2025-11-20 19:43:21,789 | INFO     | intersect: -8188234276.748953
[2025-11-20 20:44:00] 2025-11-20 19:43:21,791 | INFO     | chi2: 13.086726275236137
[2025-11-20 20:44:00] 2025-11-20 19:43:21,791 | INFO     | current chi2=13.086726275236137 (change=27.374477112029684 %)
[2025-11-20 20:44:00] 2025-11-20 19:43:21,793 | INFO     | sum of square deviations: 986997011485.4016
[2025-11-20 20:44:00] 2025-11-20 19:43:21,874 | INFO     | sum of deviations: 4098517969443.1147
[2025-11-20 20:44:00] 2025-11-20 19:43:21,875 | INFO     | mean x: 1763622820.2549286
[2025-11-20 20:44:00] 2025-11-20 19:43:21,875 | INFO     | mean y: 2869784.1570360297
[2025-11-20 20:44:00] 2025-11-20 19:43:21,875 | INFO     | intersect: -7320596990.333476
[2025-11-20 20:44:00] 2025-11-20 19:43:21,877 | INFO     | chi2: 9.693311678022898
[2025-11-20 20:44:00] 2025-11-20 19:43:21,877 | INFO     | current chi2=9.693311678022898 (change=25.930202296922484 %)
[2025-11-20 20:44:00] 2025-11-20 19:43:21,879 | INFO     | sum of square deviations: 976966055729.9935
[2025-11-20 20:44:00] 2025-11-20 19:43:21,957 | INFO     | sum of deviations: 3574363955733.5244
[2025-11-20 20:44:00] 2025-11-20 19:43:21,957 | INFO     | mean x: 1763622972.7592087
[2025-11-20 20:44:00] 2025-11-20 19:43:21,958 | INFO     | mean y: 2877753.2762619373
[2025-11-20 20:44:00] 2025-11-20 19:43:21,958 | INFO     | intersect: -6449578141.543821
[2025-11-20 20:44:00] 2025-11-20 19:43:21,960 | INFO     | chi2: 6.455074889029381
[2025-11-20 20:44:00] 2025-11-20 19:43:21,960 | INFO     | current chi2=6.455074889029381 (change=33.406919085614355 %)
[2025-11-20 20:44:00] 2025-11-20 19:43:21,962 | INFO     | sum of square deviations: 967003465788.5978
[2025-11-20 20:44:00] 2025-11-20 19:43:22,027 | INFO     | sum of deviations: 3311124142460.599
[2025-11-20 20:44:00] 2025-11-20 19:43:22,027 | INFO     | mean x: 1763623125.262149
[2025-11-20 20:44:00] 2025-11-20 19:43:22,027 | INFO     | mean y: 2881779.079397673
[2025-11-20 20:44:00] 2025-11-20 19:43:22,027 | INFO     | intersect: -6035953979.895988
[2025-11-20 20:44:00] 2025-11-20 19:43:22,029 | INFO     | chi2: 5.5402478892080165
[2025-11-20 20:44:00] 2025-11-20 19:43:22,029 | INFO     | current chi2=5.5402478892080165 (change=14.17221357688885 %)
[2025-11-20 20:44:00] 2025-11-20 19:43:22,029 | INFO     | left removable region: 40
[2025-11-20 20:44:00] 2025-11-20 19:43:22,031 | INFO     | sum of square deviations: 916290737573.707
[2025-11-20 20:44:00] 2025-11-20 19:43:22,099 | INFO     | sum of deviations: 3508099483653.7056
[2025-11-20 20:44:00] 2025-11-20 19:43:22,100 | INFO     | mean x: 1763623552.2682927
[2025-11-20 20:44:00] 2025-11-20 19:43:22,100 | INFO     | mean y: 2897420.439721254
[2025-11-20 20:44:00] 2025-11-20 19:43:22,100 | INFO     | intersect: -6749290088.794189
[2025-11-20 20:44:00] 2025-11-20 19:43:22,102 | INFO     | chi2: 1.3705686678960132
[2025-11-20 20:44:00] 2025-11-20 19:43:22,102 | INFO     | current memory leak: 3.83 B/s (using 1435 data points, chi2=1.37)
[2025-11-20 20:44:00] 2025-11-20 19:43:22,104 | INFO     | could have reported an average CPU frequency of 1999 MHz (50 samples)
[2025-11-20 20:44:00] 2025-11-20 19:43:22,105 | INFO     | ..............................
[2025-11-20 20:44:00] 2025-11-20 19:43:22,105 | INFO     | . Timing measurements:
[2025-11-20 20:44:00] 2025-11-20 19:43:22,105 | INFO     | . get job = 0 s
[2025-11-20 20:44:00] 2025-11-20 19:43:22,105 | INFO     | . initial setup = 9 s
[2025-11-20 20:44:00] 2025-11-20 19:43:22,105 | INFO     | . payload setup = 158 s
[2025-11-20 20:44:00] 2025-11-20 19:43:22,105 | INFO     | . stage-in = 0 s
[2025-11-20 20:44:00] 2025-11-20 19:43:22,105 | INFO     | . payload execution = 90471 s
[2025-11-20 20:44:00] 2025-11-20 19:43:22,105 | INFO     | . stage-out = 6 s
[2025-11-20 20:44:00] 2025-11-20 19:43:22,105 | INFO     | . log creation = 2 s
[2025-11-20 20:44:00] 2025-11-20 19:43:22,106 | INFO     | ..............................
[2025-11-20 20:44:00] 2025-11-20 19:43:22,601 | INFO     | 
[2025-11-20 20:44:00] 2025-11-20 19:43:22,601 | INFO     | job summary report
[2025-11-20 20:44:00] 2025-11-20 19:43:22,601 | INFO     | --------------------------------------------------
[2025-11-20 20:44:00] 2025-11-20 19:43:22,601 | INFO     | PanDA job id: 6891570836
[2025-11-20 20:44:00] 2025-11-20 19:43:22,602 | INFO     | task id: 47493068
[2025-11-20 20:44:00] 2025-11-20 19:43:22,602 | INFO     | errors: (none)
[2025-11-20 20:44:00] 2025-11-20 19:43:22,602 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-20 20:44:00] 2025-11-20 19:43:22,602 | INFO     | pilot state: finished 
[2025-11-20 20:44:00] 2025-11-20 19:43:22,602 | INFO     | transexitcode: 0
[2025-11-20 20:44:00] 2025-11-20 19:43:22,602 | INFO     | exeerrorcode: 0
[2025-11-20 20:44:00] 2025-11-20 19:43:22,602 | INFO     | exeerrordiag: 
[2025-11-20 20:44:00] 2025-11-20 19:43:22,602 | INFO     | exitcode: 0
[2025-11-20 20:44:00] 2025-11-20 19:43:22,602 | INFO     | exitmsg: OK
[2025-11-20 20:44:00] 2025-11-20 19:43:22,602 | INFO     | cpuconsumptiontime: 335788 s
[2025-11-20 20:44:00] 2025-11-20 19:43:22,602 | INFO     | nevents: 1000
[2025-11-20 20:44:00] 2025-11-20 19:43:22,602 | INFO     | neventsw: 0
[2025-11-20 20:44:00] 2025-11-20 19:43:22,603 | INFO     | pid: 20233
[2025-11-20 20:44:00] 2025-11-20 19:43:22,603 | INFO     | pgrp: 20233
[2025-11-20 20:44:00] 2025-11-20 19:43:22,603 | INFO     | corecount: 8
[2025-11-20 20:44:00] 2025-11-20 19:43:22,603 | INFO     | event service: False
[2025-11-20 20:44:00] 2025-11-20 19:43:22,603 | INFO     | sizes: {0: 2296973, 1: 2297057, 2: 2297256, 13: 2297256, 24: 2297312, 35: 2297340, 45: 2297496, 56: 2297524, 67: 2297552, 77: 2297580, 86: 2297898, 88: 2298206, 90
[2025-11-20 20:44:00] 2025-11-20 19:43:22,603 | INFO     | --------------------------------------------------
[2025-11-20 20:44:00] 2025-11-20 19:43:22,603 | INFO     | 
[2025-11-20 20:44:00] 2025-11-20 19:43:22,603 | INFO     | executing command: ls -lF /var/lib/boinc/slots/8
[2025-11-20 20:44:00] 2025-11-20 19:43:22,916 | INFO     | time since job start (90923s) is within the limit (172800.0s)
[2025-11-20 20:44:00] 2025-11-20 19:43:23,081 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-20 20:44:00] 2025-11-20 19:43:23,082 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-20 20:44:00] 2025-11-20 19:43:23,082 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-20 20:44:00] 2025-11-20 19:43:23,082 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-20 20:44:00] 2025-11-20 19:43:23,082 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-20 20:44:00] 2025-11-20 19:43:23,082 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-20 20:44:00] 2025-11-20 19:43:23,082 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-20 20:44:00] 2025-11-20 19:43:23,082 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-20 20:44:00] 2025-11-20 19:43:23,082 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-20 20:44:00] 2025-11-20 19:43:23,082 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-20 20:44:00] 2025-11-20 19:43:23,083 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-20 20:44:00] 2025-11-20 19:43:23,083 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-20 20:44:00] 2025-11-20 19:43:23,083 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-20 20:44:00] 2025-11-20 19:43:23,083 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-20 20:44:00] 2025-11-20 19:43:23,083 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-20 20:44:00] 2025-11-20 19:43:23,083 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-20 20:44:00] 2025-11-20 19:43:23,083 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-20 20:44:00] 2025-11-20 19:43:23,083 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-20 20:44:00] 2025-11-20 19:43:23,083 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-20 20:44:00] 2025-11-20 19:43:23,083 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-20 20:44:00] 2025-11-20 19:43:23,084 | INFO     | job 6891570836 has completed (purged errors)
[2025-11-20 20:44:00] 2025-11-20 19:43:23,084 | INFO     | overall cleanup function is called
[2025-11-20 20:44:00] 2025-11-20 19:43:24,105 | INFO     | --- collectZombieJob: --- 10, [20233]
[2025-11-20 20:44:00] 2025-11-20 19:43:24,105 | INFO     | zombie collector waiting for pid 20233
[2025-11-20 20:44:00] 2025-11-20 19:43:24,105 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-20 20:44:00] 2025-11-20 19:43:24,105 | INFO     | collected zombie processes
[2025-11-20 20:44:00] 2025-11-20 19:43:24,105 | INFO     | will attempt to kill all subprocesses of pid=20233
[2025-11-20 20:44:00] 2025-11-20 19:43:24,243 | INFO     | process IDs to be killed: [20233] (in reverse order)
[2025-11-20 20:44:00] 2025-11-20 19:43:25,255 | WARNING  | found no corresponding commands to process id(s)
[2025-11-20 20:44:00] 2025-11-20 19:43:25,256 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-20 20:44:00] 2025-11-20 19:43:25,259 | INFO     | did not find any defunct processes belonging to 20233
[2025-11-20 20:44:00] 2025-11-20 19:43:25,263 | INFO     | did not find any defunct processes belonging to 20233
[2025-11-20 20:44:00] 2025-11-20 19:43:25,327 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-20 20:44:00] 2025-11-20 19:43:25,327 | INFO     | ready for new job
[2025-11-20 20:44:00] 2025-11-20 19:43:25,328 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-20 20:44:00] 2025-11-20 19:43:25,334 | INFO     | ***************************************
[2025-11-20 20:44:00] 2025-11-20 19:43:25,334 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-20 20:44:00] 2025-11-20 19:43:25,335 | INFO     | ***************************************
[2025-11-20 20:44:00] 2025-11-20 19:43:25,335 | INFO     | 
[2025-11-20 20:44:00] 2025-11-20 19:43:25,335 | INFO     | pilot is running in a VM
[2025-11-20 20:44:00] 2025-11-20 19:43:25,335 | INFO     | architecture information:
[2025-11-20 20:44:00] 2025-11-20 19:43:25,344 | INFO     | executing command: cat /etc/os-release
[2025-11-20 20:44:00] 2025-11-20 19:43:25,720 | INFO     | cat /etc/os-release:
[2025-11-20 20:44:00] NAME="CentOS Linux"
[2025-11-20 20:44:00] VERSION="7 (Core)"
[2025-11-20 20:44:00] ID="centos"
[2025-11-20 20:44:00] ID_LIKE="rhel fedora"
[2025-11-20 20:44:00] VERSION_ID="7"
[2025-11-20 20:44:00] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-20 20:44:00] ANSI_COLOR="0;31"
[2025-11-20 20:44:00] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-20 20:44:00] HOME_URL="https://www.centos.org/"
[2025-11-20 20:44:00] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-20 20:44:00] 
[2025-11-20 20:44:00] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-20 20:44:00] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-20 20:44:00] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-20 20:44:00] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-20 20:44:00] 
[2025-11-20 20:44:00] 2025-11-20 19:43:25,721 | INFO     | ***************************************
[2025-11-20 20:44:00] 2025-11-20 19:43:26,224 | INFO     | executing command: df -mP /var/lib/boinc/slots/8
[2025-11-20 20:44:00] 2025-11-20 19:43:26,396 | INFO     | sufficient remaining disk space (494022950912 B)
[2025-11-20 20:44:00] 2025-11-20 19:43:26,396 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-20 20:44:00] 2025-11-20 19:43:26,397 | INFO     | current server update state: UPDATING_FINAL
[2025-11-20 20:44:00] 2025-11-20 19:43:26,397 | INFO     | update_server=False
[2025-11-20 20:44:00] 2025-11-20 19:43:26,397 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-20 20:44:00] 2025-11-20 19:43:26,397 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-20 20:44:00] 2025-11-20 19:43:26,397 | INFO     | aborting loop
[2025-11-20 20:44:00] 2025-11-20 19:43:26,398 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-20 20:44:00] 2025-11-20 19:43:26,404 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-20 20:44:00] 2025-11-20 19:43:26,506 | INFO     | all job control threads have been joined
[2025-11-20 20:44:00] 2025-11-20 19:43:27,245 | INFO     | all payload control threads have been joined
[2025-11-20 20:44:00] 2025-11-20 19:43:27,260 | INFO     | all data control threads have been joined
[2025-11-20 20:44:00] 2025-11-20 19:43:27,273 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-20 20:44:00] 2025-11-20 19:43:27,403 | INFO     | [job] retrieve thread has finished
[2025-11-20 20:44:00] 2025-11-20 19:43:27,404 | INFO     | [job] job monitor thread has finished
[2025-11-20 20:44:00] 2025-11-20 19:43:27,428 | INFO     | [payload] failed_post thread has finished
[2025-11-20 20:44:00] 2025-11-20 19:43:27,511 | INFO     | [job] control thread has finished
[2025-11-20 20:44:00] 2025-11-20 19:43:27,796 | INFO     | [payload] execute_payloads thread has finished
[2025-11-20 20:44:00] 2025-11-20 19:43:28,057 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-20 20:44:00] 2025-11-20 19:43:28,196 | INFO     | [data] copytool_in thread has finished
[2025-11-20 20:44:00] 2025-11-20 19:43:28,251 | INFO     | [payload] control thread has finished
[2025-11-20 20:44:00] 2025-11-20 19:43:28,266 | INFO     | [data] control thread has finished
[2025-11-20 20:44:00] 2025-11-20 19:43:28,279 | INFO     | [job] queue monitor thread has finished
[2025-11-20 20:44:00] 2025-11-20 19:43:28,340 | INFO     | [payload] validate_post thread has finished
[2025-11-20 20:44:00] 2025-11-20 19:43:28,369 | INFO     | [job] validate thread has finished
[2025-11-20 20:44:00] 2025-11-20 19:43:28,405 | INFO     | [data] copytool_out thread has finished
[2025-11-20 20:44:00] 2025-11-20 19:43:28,463 | INFO     | [job] create_data_payload thread has finished
[2025-11-20 20:44:00] 2025-11-20 19:43:28,845 | INFO     | [payload] validate_pre thread has finished
[2025-11-20 20:44:00] 2025-11-20 19:43:30,412 | INFO     | [data] queue_monitor thread has finished
[2025-11-20 20:44:00] 2025-11-20 19:43:37,211 | INFO     | [monitor] cgroup control has ended
[2025-11-20 20:44:00] 2025-11-20 19:43:38,593 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139989216556864)>', '<ExcThread(monitor, started 139988410820352)>']
[2025-11-20 20:44:00] 2025-11-20 19:43:43,619 | INFO     | all workflow threads have been joined
[2025-11-20 20:44:00] 2025-11-20 19:43:43,619 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-20 20:44:00] 2025-11-20 19:43:43,619 | INFO     | traces error code: 0
[2025-11-20 20:44:00] 2025-11-20 19:43:43,620 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-20 20:44:00] 2025-11-20 19:43:56,114 | INFO     | PID=13618 has CPU usage=2.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-20 20:44:00] 2025-11-20 19:43:56,115 | INFO     | .. there are 9 such processes running
[2025-11-20 20:44:00] 2025-11-20 19:43:56,115 | INFO     | found 0 job(s) in 20 queues
[2025-11-20 20:44:00] 2025-11-20 19:43:56,115 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-20 20:44:00] 2025-11-20 19:43:56,115 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-20 20:44:00] 2025-11-20 19:43:56,115 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-20 20:44:00] 2025-11-20 19:43:56,115 | INFO     | [monitor] control thread has ended
[2025-11-20 20:44:00] 2025-11-20 19:43:56,464 [wrapper] ==== pilot stdout END ====
[2025-11-20 20:44:00] 2025-11-20 19:43:56,581 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-20 20:44:00] 2025-11-20 19:43:56,674 [wrapper] pilotpid: 13618
[2025-11-20 20:44:00] 2025-11-20 19:43:56,811 [wrapper] Pilot exit status: 0
[2025-11-20 20:44:00] 2025-11-20 19:43:57,142 [wrapper] supervise_pilot (15 min periods counter: 102)
[2025-11-20 20:44:00] 2025-11-20 19:43:57,244 [wrapper] pandaids: 6891570836
[2025-11-20 20:44:00] 2025-11-20 19:43:58,110 [wrapper] cleanup supervisor_pilot  4741 13619
[2025-11-20 20:44:00] 2025-11-20 19:43:58,126 [wrapper] Test setup, not cleaning
[2025-11-20 20:44:00] 2025-11-20 19:43:58,191 [wrapper] apfmon messages muted
[2025-11-20 20:44:00] 2025-11-20 19:43:58,263 [wrapper] ==== wrapper stdout END ====
[2025-11-20 20:44:00] 2025-11-20 19:43:58,332 [wrapper] ==== wrapper stderr END ====
[2025-11-20 20:44:00]  *** Error codes and diagnostics ***
[2025-11-20 20:44:00]     "exeErrorCode": 0,
[2025-11-20 20:44:00]     "exeErrorDiag": "",
[2025-11-20 20:44:00]     "pilotErrorCode": 0,
[2025-11-20 20:44:00]     "pilotErrorDiag": "",
[2025-11-20 20:44:00]  *** Listing of results directory ***
[2025-11-20 20:44:00] total 1331032
[2025-11-20 20:44:00] -rw-r--r--. 1 boinc boinc    576529 Nov 18 16:15 pilot3.tar.gz
[2025-11-20 20:44:00] -rw-r--r--. 1 boinc boinc      5112 Nov 18 16:39 queuedata.json
[2025-11-20 20:44:00] -rwx------. 1 boinc boinc     36292 Nov 18 16:40 runpilot2-wrapper.sh
[2025-11-20 20:44:00] -rw-r--r--. 1 boinc boinc       100 Nov 19 19:23 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-20 20:44:00] -rwxr-xr-x. 1 boinc boinc      7986 Nov 19 19:23 run_atlas
[2025-11-20 20:44:00] -rw-r--r--. 1 boinc boinc       105 Nov 19 19:23 job.xml
[2025-11-20 20:44:00] -rw-r--r--. 1 boinc boinc      6389 Nov 19 19:23 init_data.xml
[2025-11-20 20:44:00] -rw-r--r--. 2 boinc boinc 408953060 Nov 19 19:23 EVNT.47493065._000253.pool.root.1
[2025-11-20 20:44:00] -rw-r--r--. 2 boinc boinc     15120 Nov 19 19:23 start_atlas.sh
[2025-11-20 20:44:00] drwxrwx--x. 2 boinc boinc        68 Nov 19 19:23 shared
[2025-11-20 20:44:00] -rw-r--r--. 2 boinc boinc    590101 Nov 19 19:23 input.tar.gz
[2025-11-20 20:44:00] -rw-r--r--. 1 boinc boinc         0 Nov 19 19:23 boinc_lockfile
[2025-11-20 20:44:00] -rw-r--r--. 1 boinc boinc      2773 Nov 19 19:23 pandaJob.out
[2025-11-20 20:44:00] -rw-------. 1 boinc boinc    989434 Nov 19 19:27 agis_schedconf.cvmfs.json
[2025-11-20 20:44:00] drwx------. 5 boinc boinc      4096 Nov 19 19:27 pilot3
[2025-11-20 20:44:00] -rw-r--r--. 1 boinc boinc       533 Nov 20 20:29 boinc_task_state.xml
[2025-11-20 20:44:00] -rw-------. 1 boinc boinc 920682904 Nov 20 20:40 HITS.47493068._002525.pool.root.1
[2025-11-20 20:44:00] -rw-------. 1 boinc boinc      1035 Nov 20 20:41 memory_monitor_summary.json
[2025-11-20 20:44:00] -rw-------. 1 boinc boinc   1526164 Nov 20 20:41 agis_ddmendpoints.agis.ALL.json
[2025-11-20 20:44:00] -rw-------. 1 boinc boinc   2567915 Nov 20 20:41 log.47493068._002525.job.log.tgz.1
[2025-11-20 20:44:00] -rw-------. 1 boinc boinc        95 Nov 20 20:43 pilot_heartbeat.json
[2025-11-20 20:44:00] -rw-------. 1 boinc boinc      8625 Nov 20 20:43 heartbeat.json
[2025-11-20 20:44:00] -rw-r--r--. 1 boinc boinc      8192 Nov 20 20:43 boinc_mmap_file
[2025-11-20 20:44:00] -rw-r--r--. 1 boinc boinc        29 Nov 20 20:43 wrapper_checkpoint.txt
[2025-11-20 20:44:00] -rw-------. 1 boinc boinc       820 Nov 20 20:43 pilotlog.txt
[2025-11-20 20:44:00] -rw-------. 1 boinc boinc  12146797 Nov 20 20:43 log.47493068._002525.job.log.1
[2025-11-20 20:44:00] -rw-------. 1 boinc boinc       353 Nov 20 20:43 output.list
[2025-11-20 20:44:00] -rw-r--r--. 1 boinc boinc       620 Nov 20 20:44 runtime_log
[2025-11-20 20:44:00] -rw-------. 1 boinc boinc  14735360 Nov 20 20:44 result.tar.gz
[2025-11-20 20:44:00] -rw-r--r--. 1 boinc boinc      8703 Nov 20 20:44 runtime_log.err
[2025-11-20 20:44:00] -rw-------. 1 boinc boinc       662 Nov 20 20:44 DRKLDmkzcf8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmgOFKDmp5yxpm.diag
[2025-11-20 20:44:00] -rw-r--r--. 1 boinc boinc     20867 Nov 20 20:44 stderr.txt
[2025-11-20 20:44:00] HITS file was successfully produced:
[2025-11-20 20:44:00] -rw-------. 1 boinc boinc 920682904 Nov 20 20:40 shared/HITS.pool.root.1
[2025-11-20 20:44:00]  *** Contents of shared directory: ***
[2025-11-20 20:44:00] total 1313468
[2025-11-20 20:44:00] -rw-r--r--. 2 boinc boinc 408953060 Nov 19 19:23 ATLAS.root_0
[2025-11-20 20:44:00] -rw-r--r--. 2 boinc boinc     15120 Nov 19 19:23 start_atlas.sh
[2025-11-20 20:44:00] -rw-r--r--. 2 boinc boinc    590101 Nov 19 19:23 input.tar.gz
[2025-11-20 20:44:00] -rw-------. 1 boinc boinc 920682904 Nov 20 20:40 HITS.pool.root.1
[2025-11-20 20:44:00] -rw-------. 1 boinc boinc  14735360 Nov 20 20:44 result.tar.gz
20:44:02 (9842): run_atlas exited; CPU time 336372.281777
20:44:02 (9842): called boinc_finish(0)

</stderr_txt>
]]>

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