Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
19:43:29 (2740): wrapper (7.7.26015): starting
19:43:29 (2740): wrapper: running run_atlas (--nthreads 8)
[2025-11-19 19:43:29] Arguments: --nthreads 8
[2025-11-19 19:43:29] Threads: 8
[2025-11-19 19:43:29] Checking for CVMFS
[2025-11-19 19:43:30] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-19 19:43:31] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-19 19:43:31] Running cvmfs_config stat atlas.cern.ch
[2025-11-19 19:43:32] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-19 19:43:32] 2.11.2.0 2281 162471 134656 153052 0 129 24750860 25165824 4251 130560 2 51961505 99.894 25186007 2437 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-11-19 19:43:32] CVMFS is ok
[2025-11-19 19:43:32] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-19 19:43:32] Checking for apptainer binary...
[2025-11-19 19:43:32] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-19 19:43:32] Running /usr/bin/apptainer --version
[2025-11-19 19:43:32] apptainer version 1.3.2-1.el7
[2025-11-19 19:43:32] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-19 19:43:37] cg-vwn445.simple-grid.lan
[2025-11-19 19:43:37] apptainer works
[2025-11-19 19:43:37] Set ATHENA_PROC_NUMBER=8
[2025-11-19 19:43:37] Set ATHENA_CORE_NUMBER=8
[2025-11-19 19:43:37] Starting ATLAS job with PandaID=6891570696
[2025-11-19 19:43:37] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/16 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-20 21:26:28]  *** The last 200 lines of the pilot log: ***
[2025-11-20 21:26:28] 2025-11-20 20:25:24,231 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-20 21:26:28] 2025-11-20 20:25:24,292 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-20 21:26:28] 2025-11-20 20:25:24,293 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2025-11-20 21:26:28] 2025-11-20 20:25:24,295 | INFO     | using path: /var/lib/boinc/slots/16/PanDA_Pilot-6891570696/memory_monitor_summary.json (trf name=prmon)
[2025-11-20 21:26:28] 2025-11-20 20:25:24,296 | INFO     | extracted standard info from prmon json
[2025-11-20 21:26:28] 2025-11-20 20:25:24,296 | INFO     | extracted standard memory fields from prmon json
[2025-11-20 21:26:28] 2025-11-20 20:25:24,296 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-20 21:26:28] 2025-11-20 20:25:24,327 | INFO     | fitting pss+swap vs Time
[2025-11-20 21:26:28] 2025-11-20 20:25:24,330 | INFO     | sum of square deviations: 1054926489123.0828
[2025-11-20 21:26:28] 2025-11-20 20:25:24,403 | INFO     | sum of deviations: 4926610742874.624
[2025-11-20 21:26:28] 2025-11-20 20:25:24,404 | INFO     | mean x: 1763624442.8291223
[2025-11-20 21:26:28] 2025-11-20 20:25:24,404 | INFO     | mean y: 2857960.0724734045
[2025-11-20 21:26:28] 2025-11-20 20:25:24,404 | INFO     | intersect: -8233442119.623868
[2025-11-20 21:26:28] 2025-11-20 20:25:24,406 | INFO     | chi2: 14.353480622292286
[2025-11-20 21:26:28] 2025-11-20 20:25:24,408 | INFO     | sum of square deviations: 1044440837079.2224
[2025-11-20 21:26:28] 2025-11-20 20:25:24,446 | INFO     | time since job start (92266s) is within the limit (172800.0s)
[2025-11-20 21:26:28] 2025-11-20 20:25:24,483 | INFO     | sum of deviations: 5426134957938.294
[2025-11-20 21:26:28] 2025-11-20 20:25:24,484 | INFO     | mean x: 1763624290.3335557
[2025-11-20 21:26:28] 2025-11-20 20:25:24,484 | INFO     | mean y: 2865224.0793862576
[2025-11-20 21:26:28] 2025-11-20 20:25:24,484 | INFO     | intersect: -9159610116.514893
[2025-11-20 21:26:28] 2025-11-20 20:25:24,486 | INFO     | chi2: 11.292208197940507
[2025-11-20 21:26:28] 2025-11-20 20:25:24,486 | INFO     | current chi2=11.292208197940507 (change=21.327735793904505 %)
[2025-11-20 21:26:28] 2025-11-20 20:25:24,486 | INFO     | right removable region: 1498
[2025-11-20 21:26:28] 2025-11-20 20:25:24,488 | INFO     | sum of square deviations: 1044439617689.2216
[2025-11-20 21:26:28] 2025-11-20 20:25:24,548 | INFO     | sum of deviations: 4300572786346.1636
[2025-11-20 21:26:28] 2025-11-20 20:25:24,548 | INFO     | mean x: 1763624595.3335557
[2025-11-20 21:26:28] 2025-11-20 20:25:24,549 | INFO     | mean y: 2867063.525683789
[2025-11-20 21:26:28] 2025-11-20 20:25:24,549 | INFO     | intersect: -7259013672.866576
[2025-11-20 21:26:28] 2025-11-20 20:25:24,550 | INFO     | chi2: 9.715498897745107
[2025-11-20 21:26:28] 2025-11-20 20:25:24,551 | INFO     | current chi2=9.715498897745107 (change=32.31259264978533 %)
[2025-11-20 21:26:28] 2025-11-20 20:25:24,553 | INFO     | sum of square deviations: 1034022468492.7998
[2025-11-20 21:26:28] 2025-11-20 20:25:24,612 | INFO     | sum of deviations: 3741115460536.449
[2025-11-20 21:26:28] 2025-11-20 20:25:24,612 | INFO     | mean x: 1763624747.8380187
[2025-11-20 21:26:28] 2025-11-20 20:25:24,613 | INFO     | mean y: 2875253.2456492637
[2025-11-20 21:26:28] 2025-11-20 20:25:24,613 | INFO     | intersect: -6377956896.696605
[2025-11-20 21:26:28] 2025-11-20 20:25:24,615 | INFO     | chi2: 6.135079165831426
[2025-11-20 21:26:28] 2025-11-20 20:25:24,615 | INFO     | current chi2=6.135079165831426 (change=36.85265954530311 %)
[2025-11-20 21:26:28] 2025-11-20 20:25:24,617 | INFO     | sum of square deviations: 1023674899863.0044
[2025-11-20 21:26:28] 2025-11-20 20:25:24,676 | INFO     | sum of deviations: 3395795584093.216
[2025-11-20 21:26:28] 2025-11-20 20:25:24,676 | INFO     | mean x: 1763624900.3418403
[2025-11-20 21:26:28] 2025-11-20 20:25:24,677 | INFO     | mean y: 2880339.404298187
[2025-11-20 21:26:28] 2025-11-20 20:25:24,677 | INFO     | intersect: -5847521628.42664
[2025-11-20 21:26:28] 2025-11-20 20:25:24,678 | INFO     | chi2: 4.701645649319485
[2025-11-20 21:26:28] 2025-11-20 20:25:24,679 | INFO     | current chi2=4.701645649319485 (change=23.364547999564106 %)
[2025-11-20 21:26:28] 2025-11-20 20:25:24,679 | INFO     | left removable region: 30
[2025-11-20 21:26:28] 2025-11-20 20:25:24,681 | INFO     | sum of square deviations: 980971852409.8981
[2025-11-20 21:26:28] 2025-11-20 20:25:24,741 | INFO     | sum of deviations: 3734245841877.5723
[2025-11-20 21:26:28] 2025-11-20 20:25:24,741 | INFO     | mean x: 1763625174.845368
[2025-11-20 21:26:28] 2025-11-20 20:25:24,742 | INFO     | mean y: 2893037.2976839235
[2025-11-20 21:26:28] 2025-11-20 20:25:24,742 | INFO     | intersect: -6710663482.8185
[2025-11-20 21:26:28] 2025-11-20 20:25:24,743 | INFO     | chi2: 0.9246571717352434
[2025-11-20 21:26:28] 2025-11-20 20:25:24,744 | INFO     | current memory leak: 3.81 B/s (using 1468 data points, chi2=0.92)
[2025-11-20 21:26:28] 2025-11-20 20:25:24,746 | INFO     | could have reported an average CPU frequency of 1999 MHz (51 samples)
[2025-11-20 21:26:28] 2025-11-20 20:25:24,747 | INFO     | ..............................
[2025-11-20 21:26:28] 2025-11-20 20:25:24,747 | INFO     | . Timing measurements:
[2025-11-20 21:26:28] 2025-11-20 20:25:24,747 | INFO     | . get job = 0 s
[2025-11-20 21:26:28] 2025-11-20 20:25:24,747 | INFO     | . initial setup = 23 s
[2025-11-20 21:26:28] 2025-11-20 20:25:24,747 | INFO     | . payload setup = 171 s
[2025-11-20 21:26:28] 2025-11-20 20:25:24,747 | INFO     | . stage-in = 0 s
[2025-11-20 21:26:28] 2025-11-20 20:25:24,747 | INFO     | . payload execution = 91853 s
[2025-11-20 21:26:28] 2025-11-20 20:25:24,747 | INFO     | . stage-out = 4 s
[2025-11-20 21:26:28] 2025-11-20 20:25:24,747 | INFO     | . log creation = 1 s
[2025-11-20 21:26:28] 2025-11-20 20:25:24,748 | INFO     | ..............................
[2025-11-20 21:26:28] 2025-11-20 20:25:25,048 | INFO     | 
[2025-11-20 21:26:28] 2025-11-20 20:25:25,049 | INFO     | job summary report
[2025-11-20 21:26:28] 2025-11-20 20:25:25,049 | INFO     | --------------------------------------------------
[2025-11-20 21:26:28] 2025-11-20 20:25:25,049 | INFO     | PanDA job id: 6891570696
[2025-11-20 21:26:28] 2025-11-20 20:25:25,049 | INFO     | task id: 47493068
[2025-11-20 21:26:28] 2025-11-20 20:25:25,049 | INFO     | errors: (none)
[2025-11-20 21:26:28] 2025-11-20 20:25:25,049 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-20 21:26:28] 2025-11-20 20:25:25,049 | INFO     | pilot state: finished 
[2025-11-20 21:26:28] 2025-11-20 20:25:25,049 | INFO     | transexitcode: 0
[2025-11-20 21:26:28] 2025-11-20 20:25:25,049 | INFO     | exeerrorcode: 0
[2025-11-20 21:26:28] 2025-11-20 20:25:25,049 | INFO     | exeerrordiag: 
[2025-11-20 21:26:28] 2025-11-20 20:25:25,049 | INFO     | exitcode: 0
[2025-11-20 21:26:28] 2025-11-20 20:25:25,049 | INFO     | exitmsg: OK
[2025-11-20 21:26:28] 2025-11-20 20:25:25,050 | INFO     | cpuconsumptiontime: 339958 s
[2025-11-20 21:26:28] 2025-11-20 20:25:25,050 | INFO     | nevents: 1000
[2025-11-20 21:26:28] 2025-11-20 20:25:25,050 | INFO     | neventsw: 0
[2025-11-20 21:26:28] 2025-11-20 20:25:25,050 | INFO     | pid: 13099
[2025-11-20 21:26:28] 2025-11-20 20:25:25,050 | INFO     | pgrp: 13099
[2025-11-20 21:26:28] 2025-11-20 20:25:25,050 | INFO     | corecount: 8
[2025-11-20 21:26:28] 2025-11-20 20:25:25,050 | INFO     | event service: False
[2025-11-20 21:26:28] 2025-11-20 20:25:25,050 | INFO     | sizes: {0: 2296372, 1: 2297058, 2: 2297257, 3: 2297257, 14: 2297285, 24: 2297313, 35: 2297469, 46: 2297497, 57: 2297525, 67: 2297553, 78: 2297581, 89: 2297917, 100
[2025-11-20 21:26:28] 2025-11-20 20:25:25,050 | INFO     | --------------------------------------------------
[2025-11-20 21:26:28] 2025-11-20 20:25:25,050 | INFO     | 
[2025-11-20 21:26:28] 2025-11-20 20:25:25,050 | INFO     | executing command: ls -lF /var/lib/boinc/slots/16
[2025-11-20 21:26:28] 2025-11-20 20:25:25,098 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-20 21:26:28] 2025-11-20 20:25:25,098 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-20 21:26:28] 2025-11-20 20:25:25,098 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-20 21:26:28] 2025-11-20 20:25:25,098 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-20 21:26:28] 2025-11-20 20:25:25,098 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-20 21:26:28] 2025-11-20 20:25:25,098 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-20 21:26:28] 2025-11-20 20:25:25,099 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-20 21:26:28] 2025-11-20 20:25:25,099 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-20 21:26:28] 2025-11-20 20:25:25,099 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-20 21:26:28] 2025-11-20 20:25:25,099 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-20 21:26:28] 2025-11-20 20:25:25,099 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-20 21:26:28] 2025-11-20 20:25:25,099 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-20 21:26:28] 2025-11-20 20:25:25,099 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-20 21:26:28] 2025-11-20 20:25:25,099 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-20 21:26:28] 2025-11-20 20:25:25,099 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-20 21:26:28] 2025-11-20 20:25:25,100 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-20 21:26:28] 2025-11-20 20:25:25,100 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-20 21:26:28] 2025-11-20 20:25:25,100 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-20 21:26:28] 2025-11-20 20:25:25,100 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-20 21:26:28] 2025-11-20 20:25:25,100 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-20 21:26:28] 2025-11-20 20:25:25,100 | INFO     | job 6891570696 has completed (purged errors)
[2025-11-20 21:26:28] 2025-11-20 20:25:25,100 | INFO     | overall cleanup function is called
[2025-11-20 21:26:28] 2025-11-20 20:25:26,122 | INFO     | --- collectZombieJob: --- 10, [13099]
[2025-11-20 21:26:28] 2025-11-20 20:25:26,122 | INFO     | zombie collector waiting for pid 13099
[2025-11-20 21:26:28] 2025-11-20 20:25:26,123 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-20 21:26:28] 2025-11-20 20:25:26,123 | INFO     | collected zombie processes
[2025-11-20 21:26:28] 2025-11-20 20:25:26,123 | INFO     | will attempt to kill all subprocesses of pid=13099
[2025-11-20 21:26:28] 2025-11-20 20:25:26,246 | INFO     | process IDs to be killed: [13099] (in reverse order)
[2025-11-20 21:26:28] 2025-11-20 20:25:26,386 | WARNING  | found no corresponding commands to process id(s)
[2025-11-20 21:26:28] 2025-11-20 20:25:26,387 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-20 21:26:28] 2025-11-20 20:25:26,390 | INFO     | did not find any defunct processes belonging to 13099
[2025-11-20 21:26:28] 2025-11-20 20:25:26,394 | INFO     | did not find any defunct processes belonging to 13099
[2025-11-20 21:26:28] 2025-11-20 20:25:26,397 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-20 21:26:28] 2025-11-20 20:25:26,397 | INFO     | ready for new job
[2025-11-20 21:26:28] 2025-11-20 20:25:26,397 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-20 21:26:28] 2025-11-20 20:25:26,405 | INFO     | ***************************************
[2025-11-20 21:26:28] 2025-11-20 20:25:26,405 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-20 21:26:28] 2025-11-20 20:25:26,405 | INFO     | ***************************************
[2025-11-20 21:26:28] 2025-11-20 20:25:26,405 | INFO     | 
[2025-11-20 21:26:28] 2025-11-20 20:25:26,406 | INFO     | pilot is running in a VM
[2025-11-20 21:26:28] 2025-11-20 20:25:26,406 | INFO     | architecture information:
[2025-11-20 21:26:28] 2025-11-20 20:25:26,406 | INFO     | executing command: cat /etc/os-release
[2025-11-20 21:26:28] 2025-11-20 20:25:26,426 | INFO     | cat /etc/os-release:
[2025-11-20 21:26:28] NAME="CentOS Linux"
[2025-11-20 21:26:28] VERSION="7 (Core)"
[2025-11-20 21:26:28] ID="centos"
[2025-11-20 21:26:28] ID_LIKE="rhel fedora"
[2025-11-20 21:26:28] VERSION_ID="7"
[2025-11-20 21:26:28] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-20 21:26:28] ANSI_COLOR="0;31"
[2025-11-20 21:26:28] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-20 21:26:28] HOME_URL="https://www.centos.org/"
[2025-11-20 21:26:28] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-20 21:26:28] 
[2025-11-20 21:26:28] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-20 21:26:28] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-20 21:26:28] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-20 21:26:28] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-20 21:26:28] 
[2025-11-20 21:26:28] 2025-11-20 20:25:26,427 | INFO     | ***************************************
[2025-11-20 21:26:28] 2025-11-20 20:25:26,929 | INFO     | executing command: df -mP /var/lib/boinc/slots/16
[2025-11-20 21:26:28] 2025-11-20 20:25:26,976 | INFO     | sufficient remaining disk space (494853423104 B)
[2025-11-20 21:26:28] 2025-11-20 20:25:26,977 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-20 21:26:28] 2025-11-20 20:25:26,977 | INFO     | current server update state: UPDATING_FINAL
[2025-11-20 21:26:28] 2025-11-20 20:25:26,977 | INFO     | update_server=False
[2025-11-20 21:26:28] 2025-11-20 20:25:26,977 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-20 21:26:28] 2025-11-20 20:25:26,978 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-20 21:26:28] 2025-11-20 20:25:27,741 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-20 21:26:28] 2025-11-20 20:25:27,742 | INFO     | aborting loop
[2025-11-20 21:26:28] 2025-11-20 20:25:27,752 | INFO     | all job control threads have been joined
[2025-11-20 21:26:28] 2025-11-20 20:25:27,836 | INFO     | all data control threads have been joined
[2025-11-20 21:26:28] 2025-11-20 20:25:27,983 | INFO     | [job] retrieve thread has finished
[2025-11-20 21:26:28] 2025-11-20 20:25:28,308 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-20 21:26:28] 2025-11-20 20:25:28,369 | INFO     | all payload control threads have been joined
[2025-11-20 21:26:28] 2025-11-20 20:25:28,748 | INFO     | [job] job monitor thread has finished
[2025-11-20 21:26:28] 2025-11-20 20:25:28,758 | INFO     | [job] control thread has finished
[2025-11-20 21:26:28] 2025-11-20 20:25:28,764 | INFO     | [payload] failed_post thread has finished
[2025-11-20 21:26:28] 2025-11-20 20:25:28,792 | INFO     | [data] copytool_in thread has finished
[2025-11-20 21:26:28] 2025-11-20 20:25:28,806 | INFO     | [payload] validate_post thread has finished
[2025-11-20 21:26:28] 2025-11-20 20:25:28,842 | INFO     | [data] control thread has finished
[2025-11-20 21:26:28] 2025-11-20 20:25:28,942 | INFO     | [payload] validate_pre thread has finished
[2025-11-20 21:26:28] 2025-11-20 20:25:28,985 | INFO     | [data] copytool_out thread has finished
[2025-11-20 21:26:28] 2025-11-20 20:25:29,004 | INFO     | [job] validate thread has finished
[2025-11-20 21:26:28] 2025-11-20 20:25:29,185 | INFO     | [job] create_data_payload thread has finished
[2025-11-20 21:26:28] 2025-11-20 20:25:29,273 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-20 21:26:28] 2025-11-20 20:25:29,290 | INFO     | [payload] execute_payloads thread has finished
[2025-11-20 21:26:28] 2025-11-20 20:25:29,375 | INFO     | [payload] control thread has finished
[2025-11-20 21:26:28] 2025-11-20 20:25:29,889 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-20 21:26:28] 2025-11-20 20:25:30,894 | INFO     | [job] queue monitor thread has finished
[2025-11-20 21:26:28] 2025-11-20 20:25:33,282 | INFO     | [data] queue_monitor thread has finished
[2025-11-20 21:26:28] 2025-11-20 20:25:57,647 | INFO     | PID=6520 has CPU usage=2.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-11-20 21:26:28] 2025-11-20 20:25:57,647 | INFO     | .. there are 9 such processes running
[2025-11-20 21:26:28] 2025-11-20 20:25:57,647 | INFO     | found 0 job(s) in 20 queues
[2025-11-20 21:26:28] 2025-11-20 20:25:57,648 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-20 21:26:28] 2025-11-20 20:25:57,648 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-20 21:26:28] 2025-11-20 20:26:19,247 | INFO     | [monitor] cgroup control has ended
[2025-11-20 21:26:28] 2025-11-20 20:26:19,288 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139849010587456)>', '<ExcThread(monitor, started 139848346228480)>']
[2025-11-20 21:26:28] 2025-11-20 20:26:19,783 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-20 21:26:28] 2025-11-20 20:26:19,783 | INFO     | [monitor] control thread has ended
[2025-11-20 21:26:28] 2025-11-20 20:26:24,314 | INFO     | all workflow threads have been joined
[2025-11-20 21:26:28] 2025-11-20 20:26:24,314 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-20 21:26:28] 2025-11-20 20:26:24,315 | INFO     | traces error code: 0
[2025-11-20 21:26:28] 2025-11-20 20:26:24,315 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-20 21:26:28] 2025-11-20 20:26:24,631 [wrapper] ==== pilot stdout END ====
[2025-11-20 21:26:28] 2025-11-20 20:26:24,737 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-20 21:26:28] 2025-11-20 20:26:24,840 [wrapper] pilotpid: 6520
[2025-11-20 21:26:28] 2025-11-20 20:26:24,897 [wrapper] Pilot exit status: 0
[2025-11-20 21:26:28] 2025-11-20 20:26:25,284 [wrapper] pandaids: 6891570696
[2025-11-20 21:26:28] 2025-11-20 20:26:25,788 [wrapper] cleanup supervisor_pilot 19751 6521
[2025-11-20 21:26:28] 2025-11-20 20:26:25,816 [wrapper] Test setup, not cleaning
[2025-11-20 21:26:28] 2025-11-20 20:26:25,890 [wrapper] apfmon messages muted
[2025-11-20 21:26:28] 2025-11-20 20:26:25,970 [wrapper] ==== wrapper stdout END ====
[2025-11-20 21:26:28] 2025-11-20 20:26:26,052 [wrapper] ==== wrapper stderr END ====
[2025-11-20 21:26:28]  *** Error codes and diagnostics ***
[2025-11-20 21:26:28]     "exeErrorCode": 0,
[2025-11-20 21:26:28]     "exeErrorDiag": "",
[2025-11-20 21:26:28]     "pilotErrorCode": 0,
[2025-11-20 21:26:28]     "pilotErrorDiag": "",
[2025-11-20 21:26:28]  *** Listing of results directory ***
[2025-11-20 21:26:28] total 1317216
[2025-11-20 21:26:28] -rw-r--r--. 1 boinc boinc    576529 Nov 18 16:15 pilot3.tar.gz
[2025-11-20 21:26:28] -rw-r--r--. 1 boinc boinc      5112 Nov 18 16:39 queuedata.json
[2025-11-20 21:26:28] -rwx------. 1 boinc boinc     36292 Nov 18 16:40 runpilot2-wrapper.sh
[2025-11-20 21:26:28] -rw-r--r--. 1 boinc boinc       100 Nov 19 19:43 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-20 21:26:28] -rwxr-xr-x. 1 boinc boinc      7986 Nov 19 19:43 run_atlas
[2025-11-20 21:26:28] -rw-r--r--. 1 boinc boinc       105 Nov 19 19:43 job.xml
[2025-11-20 21:26:28] -rw-r--r--. 1 boinc boinc      6390 Nov 19 19:43 init_data.xml
[2025-11-20 21:26:28] -rw-r--r--. 2 boinc boinc 409305618 Nov 19 19:43 EVNT.47493065._000249.pool.root.1
[2025-11-20 21:26:28] -rw-r--r--. 2 boinc boinc     15120 Nov 19 19:43 start_atlas.sh
[2025-11-20 21:26:28] drwxrwx--x. 2 boinc boinc        68 Nov 19 19:43 shared
[2025-11-20 21:26:28] -rw-r--r--. 2 boinc boinc    590099 Nov 19 19:43 input.tar.gz
[2025-11-20 21:26:28] -rw-r--r--. 1 boinc boinc         0 Nov 19 19:43 boinc_lockfile
[2025-11-20 21:26:28] -rw-r--r--. 1 boinc boinc      2773 Nov 19 19:43 pandaJob.out
[2025-11-20 21:26:28] -rw-------. 1 boinc boinc    989434 Nov 19 19:47 agis_schedconf.cvmfs.json
[2025-11-20 21:26:28] drwx------. 5 boinc boinc      4096 Nov 19 19:47 pilot3
[2025-11-20 21:26:28] -rw-r--r--. 1 boinc boinc       533 Nov 20 21:13 boinc_task_state.xml
[2025-11-20 21:26:28] -rw-------. 1 boinc boinc 905921272 Nov 20 21:24 HITS.47493068._002488.pool.root.1
[2025-11-20 21:26:28] -rw-------. 1 boinc boinc      1033 Nov 20 21:24 memory_monitor_summary.json
[2025-11-20 21:26:28] -rw-------. 1 boinc boinc   1526164 Nov 20 21:24 agis_ddmendpoints.agis.ALL.json
[2025-11-20 21:26:28] -rw-------. 1 boinc boinc   2571398 Nov 20 21:24 log.47493068._002488.job.log.tgz.1
[2025-11-20 21:26:28] -rw-------. 1 boinc boinc        95 Nov 20 21:24 pilot_heartbeat.json
[2025-11-20 21:26:28] -rw-------. 1 boinc boinc      7956 Nov 20 21:25 heartbeat.json
[2025-11-20 21:26:28] -rw-r--r--. 1 boinc boinc        29 Nov 20 21:26 wrapper_checkpoint.txt
[2025-11-20 21:26:28] -rw-r--r--. 1 boinc boinc      8192 Nov 20 21:26 boinc_mmap_file
[2025-11-20 21:26:28] -rw-------. 1 boinc boinc      4884 Nov 20 21:26 pilotlog.txt
[2025-11-20 21:26:28] -rw-------. 1 boinc boinc  12272832 Nov 20 21:26 log.47493068._002488.job.log.1
[2025-11-20 21:26:28] -rw-------. 1 boinc boinc       353 Nov 20 21:26 output.list
[2025-11-20 21:26:28] -rw-r--r--. 1 boinc boinc       620 Nov 20 21:26 runtime_log
[2025-11-20 21:26:28] -rw-------. 1 boinc boinc  14868480 Nov 20 21:26 result.tar.gz
[2025-11-20 21:26:28] -rw-------. 1 boinc boinc       662 Nov 20 21:26 dvnKDmkzcf8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmIOFKDmwrqbum.diag
[2025-11-20 21:26:28] -rw-r--r--. 1 boinc boinc      8717 Nov 20 21:26 runtime_log.err
[2025-11-20 21:26:28] -rw-r--r--. 1 boinc boinc     21011 Nov 20 21:26 stderr.txt
[2025-11-20 21:26:28] HITS file was successfully produced:
[2025-11-20 21:26:28] -rw-------. 1 boinc boinc 905921272 Nov 20 21:24 shared/HITS.pool.root.1
[2025-11-20 21:26:28]  *** Contents of shared directory: ***
[2025-11-20 21:26:28] total 1299524
[2025-11-20 21:26:28] -rw-r--r--. 2 boinc boinc 409305618 Nov 19 19:43 ATLAS.root_0
[2025-11-20 21:26:28] -rw-r--r--. 2 boinc boinc     15120 Nov 19 19:43 start_atlas.sh
[2025-11-20 21:26:28] -rw-r--r--. 2 boinc boinc    590099 Nov 19 19:43 input.tar.gz
[2025-11-20 21:26:28] -rw-------. 1 boinc boinc 905921272 Nov 20 21:24 HITS.pool.root.1
[2025-11-20 21:26:28] -rw-------. 1 boinc boinc  14868480 Nov 20 21:26 result.tar.gz
21:26:30 (2740): run_atlas exited; CPU time 340515.738602
21:26:30 (2740): called boinc_finish(0)

</stderr_txt>
]]>

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