Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
21:05:23 (23267): wrapper (7.7.26015): starting
21:05:23 (23267): wrapper: running run_atlas (--nthreads 8)
[2025-11-20 21:05:23] Arguments: --nthreads 8
[2025-11-20 21:05:23] Threads: 8
[2025-11-20 21:05:23] Checking for CVMFS
[2025-11-20 21:05:24] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-20 21:05:24] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-20 21:05:24] Running cvmfs_config stat atlas.cern.ch
[2025-11-20 21:05:26] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-20 21:05:26] 2.11.2.0 32728 277013 146500 153088 1 304 16897435 25165825 4239 130560 2 136604220 99.888 74471855 3113 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-11-20 21:05:26] CVMFS is ok
[2025-11-20 21:05:26] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-20 21:05:26] Checking for apptainer binary...
[2025-11-20 21:05:26] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-20 21:05:26] Running /usr/bin/apptainer --version
[2025-11-20 21:05:26] apptainer version 1.3.2-1.el7
[2025-11-20 21:05:26] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-20 21:05:31] cg-vwn337.simple-grid.lan
[2025-11-20 21:05:31] apptainer works
[2025-11-20 21:05:31] Set ATHENA_PROC_NUMBER=8
[2025-11-20 21:05:31] Set ATHENA_CORE_NUMBER=8
[2025-11-20 21:05:32] Starting ATLAS job with PandaID=6891569582
[2025-11-20 21:05:32] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-21 22:37:15]  *** The last 200 lines of the pilot log: ***
[2025-11-21 22:37:15] 2025-11-21 21:36:05,185 | INFO     | monitor loop #6181: job 0:6891569582 is in state 'finished'
[2025-11-21 22:37:15] 2025-11-21 21:36:05,185 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-21 22:37:15] 2025-11-21 21:36:06,943 | INFO     | time since job start (91601s) is within the limit (172800.0s)
[2025-11-21 22:37:15] 2025-11-21 21:36:07,690 | INFO     | monitor loop #6182: job 0:6891569582 is in state 'finished'
[2025-11-21 22:37:15] 2025-11-21 21:36:07,690 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-21 22:37:15] 2025-11-21 21:36:08,951 | INFO     | time since job start (91603s) is within the limit (172800.0s)
[2025-11-21 22:37:15] 2025-11-21 21:36:10,194 | INFO     | monitor loop #6183: job 0:6891569582 is in state 'finished'
[2025-11-21 22:37:15] 2025-11-21 21:36:10,194 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-21 22:37:15] 2025-11-21 21:36:10,960 | INFO     | time since job start (91605s) is within the limit (172800.0s)
[2025-11-21 22:37:15] 2025-11-21 21:36:11,870 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-21 22:37:15] 2025-11-21 21:36:11,871 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2025-11-21 22:37:15] 2025-11-21 21:36:11,873 | INFO     | using path: /var/lib/boinc/slots/5/PanDA_Pilot-6891569582/memory_monitor_summary.json (trf name=prmon)
[2025-11-21 22:37:15] 2025-11-21 21:36:11,874 | INFO     | extracted standard info from prmon json
[2025-11-21 22:37:15] 2025-11-21 21:36:11,874 | INFO     | extracted standard memory fields from prmon json
[2025-11-21 22:37:15] 2025-11-21 21:36:11,874 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-21 22:37:15] 2025-11-21 21:36:11,918 | INFO     | fitting pss+swap vs Time
[2025-11-21 22:37:15] 2025-11-21 21:36:11,921 | INFO     | sum of square deviations: 1029876009190.1346
[2025-11-21 22:37:15] 2025-11-21 21:36:11,982 | INFO     | sum of deviations: 2566821641657.139
[2025-11-21 22:37:15] 2025-11-21 21:36:11,982 | INFO     | mean x: 1763715362.9229221
[2025-11-21 22:37:15] 2025-11-21 21:36:11,983 | INFO     | mean y: 2868985.5837801606
[2025-11-21 22:37:15] 2025-11-21 21:36:11,983 | INFO     | intersect: -4392944416.103039
[2025-11-21 22:37:15] 2025-11-21 21:36:11,984 | INFO     | chi2: 17.06636676881756
[2025-11-21 22:37:15] 2025-11-21 21:36:11,987 | INFO     | sum of square deviations: 1019557337629.98
[2025-11-21 22:37:15] 2025-11-21 21:36:12,052 | INFO     | sum of deviations: 3051226273118.4365
[2025-11-21 22:37:15] 2025-11-21 21:36:12,052 | INFO     | mean x: 1763715210.4277067
[2025-11-21 22:37:15] 2025-11-21 21:36:12,053 | INFO     | mean y: 2876143.338937458
[2025-11-21 22:37:15] 2025-11-21 21:36:12,053 | INFO     | intersect: -5275389227.067032
[2025-11-21 22:37:15] 2025-11-21 21:36:12,054 | INFO     | chi2: 14.064183437856732
[2025-11-21 22:37:15] 2025-11-21 21:36:12,055 | INFO     | current chi2=14.064183437856732 (change=17.591227070346342 %)
[2025-11-21 22:37:15] 2025-11-21 21:36:12,055 | INFO     | right removable region: 1486
[2025-11-21 22:37:15] 2025-11-21 21:36:12,057 | INFO     | sum of square deviations: 1019556042599.9774
[2025-11-21 22:37:15] 2025-11-21 21:36:12,124 | INFO     | sum of deviations: 1945901729312.1064
[2025-11-21 22:37:15] 2025-11-21 21:36:12,125 | INFO     | mean x: 1763715515.4277067
[2025-11-21 22:37:15] 2025-11-21 21:36:12,125 | INFO     | mean y: 2878160.6381977135
[2025-11-21 22:37:15] 2025-11-21 21:36:12,125 | INFO     | intersect: -3363309599.6082673
[2025-11-21 22:37:15] 2025-11-21 21:36:12,127 | INFO     | chi2: 12.586693884679097
[2025-11-21 22:37:15] 2025-11-21 21:36:12,127 | INFO     | current chi2=12.586693884679097 (change=26.24854454858781 %)
[2025-11-21 22:37:15] 2025-11-21 21:36:12,129 | INFO     | sum of square deviations: 1009305330562.1177
[2025-11-21 22:37:15] 2025-11-21 21:36:12,190 | INFO     | sum of deviations: 1589698615301.4617
[2025-11-21 22:37:15] 2025-11-21 21:36:12,190 | INFO     | mean x: 1763715667.9318488
[2025-11-21 22:37:15] 2025-11-21 21:36:12,191 | INFO     | mean y: 2883456.390688259
[2025-11-21 22:37:15] 2025-11-21 21:36:12,191 | INFO     | intersect: -2775043371.297055
[2025-11-21 22:37:15] 2025-11-21 21:36:12,192 | INFO     | chi2: 10.998878493207226
[2025-11-21 22:37:15] 2025-11-21 21:36:12,193 | INFO     | current chi2=10.998878493207226 (change=12.61503144526783 %)
[2025-11-21 22:37:15] 2025-11-21 21:36:12,193 | INFO     | left removable region: 20
[2025-11-21 22:37:15] 2025-11-21 21:36:12,195 | INFO     | sum of square deviations: 976967740988.2281
[2025-11-21 22:37:15] 2025-11-21 21:36:12,255 | INFO     | sum of deviations: 1994478470997.8467
[2025-11-21 22:37:15] 2025-11-21 21:36:12,256 | INFO     | mean x: 1763715789.9372442
[2025-11-21 22:37:15] 2025-11-21 21:36:12,256 | INFO     | mean y: 2895183.096180082
[2025-11-21 22:37:15] 2025-11-21 21:36:12,256 | INFO     | intersect: -3597728485.8394556
[2025-11-21 22:37:15] 2025-11-21 21:36:12,258 | INFO     | chi2: 7.109931614216052
[2025-11-21 22:37:15] 2025-11-21 21:36:12,258 | INFO     | current memory leak: 2.04 B/s (using 1466 data points, chi2=7.11)
[2025-11-21 22:37:15] 2025-11-21 21:36:12,261 | INFO     | could have reported an average CPU frequency of 1999 MHz (51 samples)
[2025-11-21 22:37:15] 2025-11-21 21:36:12,261 | INFO     | ..............................
[2025-11-21 22:37:15] 2025-11-21 21:36:12,261 | INFO     | . Timing measurements:
[2025-11-21 22:37:15] 2025-11-21 21:36:12,262 | INFO     | . get job = 0 s
[2025-11-21 22:37:15] 2025-11-21 21:36:12,262 | INFO     | . initial setup = 11 s
[2025-11-21 22:37:15] 2025-11-21 21:36:12,262 | INFO     | . payload setup = 162 s
[2025-11-21 22:37:15] 2025-11-21 21:36:12,262 | INFO     | . stage-in = 0 s
[2025-11-21 22:37:15] 2025-11-21 21:36:12,262 | INFO     | . payload execution = 91145 s
[2025-11-21 22:37:15] 2025-11-21 21:36:12,262 | INFO     | . stage-out = 6 s
[2025-11-21 22:37:15] 2025-11-21 21:36:12,262 | INFO     | . log creation = 1 s
[2025-11-21 22:37:15] 2025-11-21 21:36:12,262 | INFO     | ..............................
[2025-11-21 22:37:15] 2025-11-21 21:36:12,387 | INFO     | 
[2025-11-21 22:37:15] 2025-11-21 21:36:12,387 | INFO     | job summary report
[2025-11-21 22:37:15] 2025-11-21 21:36:12,388 | INFO     | --------------------------------------------------
[2025-11-21 22:37:15] 2025-11-21 21:36:12,388 | INFO     | PanDA job id: 6891569582
[2025-11-21 22:37:15] 2025-11-21 21:36:12,388 | INFO     | task id: 47493068
[2025-11-21 22:37:15] 2025-11-21 21:36:12,388 | INFO     | errors: (none)
[2025-11-21 22:37:15] 2025-11-21 21:36:12,388 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-21 22:37:15] 2025-11-21 21:36:12,388 | INFO     | pilot state: finished 
[2025-11-21 22:37:15] 2025-11-21 21:36:12,388 | INFO     | transexitcode: 0
[2025-11-21 22:37:15] 2025-11-21 21:36:12,388 | INFO     | exeerrorcode: 0
[2025-11-21 22:37:15] 2025-11-21 21:36:12,388 | INFO     | exeerrordiag: 
[2025-11-21 22:37:15] 2025-11-21 21:36:12,388 | INFO     | exitcode: 0
[2025-11-21 22:37:15] 2025-11-21 21:36:12,388 | INFO     | exitmsg: OK
[2025-11-21 22:37:15] 2025-11-21 21:36:12,388 | INFO     | cpuconsumptiontime: 335348 s
[2025-11-21 22:37:15] 2025-11-21 21:36:12,389 | INFO     | nevents: 1000
[2025-11-21 22:37:15] 2025-11-21 21:36:12,389 | INFO     | neventsw: 0
[2025-11-21 22:37:15] 2025-11-21 21:36:12,389 | INFO     | pid: 1235
[2025-11-21 22:37:15] 2025-11-21 21:36:12,389 | INFO     | pgrp: 1235
[2025-11-21 22:37:15] 2025-11-21 21:36:12,389 | INFO     | corecount: 8
[2025-11-21 22:37:15] 2025-11-21 21:36:12,389 | INFO     | event service: False
[2025-11-21 22:37:15] 2025-11-21 21:36:12,389 | INFO     | sizes: {0: 2297968, 1: 2298653, 2: 2298852, 13: 2298852, 24: 2298908, 35: 2298936, 45: 2299092, 56: 2299120, 67: 2299148, 78: 2299176, 89: 2299232, 95: 2299802, 99
[2025-11-21 22:37:15] 2025-11-21 21:36:12,389 | INFO     | --------------------------------------------------
[2025-11-21 22:37:15] 2025-11-21 21:36:12,389 | INFO     | 
[2025-11-21 22:37:15] 2025-11-21 21:36:12,389 | INFO     | executing command: ls -lF /var/lib/boinc/slots/5
[2025-11-21 22:37:15] 2025-11-21 21:36:12,755 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-21 22:37:15] 2025-11-21 21:36:12,755 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-21 22:37:15] 2025-11-21 21:36:12,756 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-21 22:37:15] 2025-11-21 21:36:12,756 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-21 22:37:15] 2025-11-21 21:36:12,756 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-21 22:37:15] 2025-11-21 21:36:12,756 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-21 22:37:15] 2025-11-21 21:36:12,756 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-21 22:37:15] 2025-11-21 21:36:12,756 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-21 22:37:15] 2025-11-21 21:36:12,756 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-21 22:37:15] 2025-11-21 21:36:12,756 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-21 22:37:15] 2025-11-21 21:36:12,756 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-21 22:37:15] 2025-11-21 21:36:12,756 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-21 22:37:15] 2025-11-21 21:36:12,756 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-21 22:37:15] 2025-11-21 21:36:12,756 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-21 22:37:15] 2025-11-21 21:36:12,757 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-21 22:37:15] 2025-11-21 21:36:12,757 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-21 22:37:15] 2025-11-21 21:36:12,757 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-21 22:37:15] 2025-11-21 21:36:12,757 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-21 22:37:15] 2025-11-21 21:36:12,757 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-21 22:37:15] 2025-11-21 21:36:12,757 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-21 22:37:15] 2025-11-21 21:36:12,757 | INFO     | job 6891569582 has completed (purged errors)
[2025-11-21 22:37:15] 2025-11-21 21:36:12,757 | INFO     | overall cleanup function is called
[2025-11-21 22:37:15] 2025-11-21 21:36:13,775 | INFO     | --- collectZombieJob: --- 10, [1235]
[2025-11-21 22:37:15] 2025-11-21 21:36:13,776 | INFO     | zombie collector waiting for pid 1235
[2025-11-21 22:37:15] 2025-11-21 21:36:13,776 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-21 22:37:15] 2025-11-21 21:36:13,776 | INFO     | collected zombie processes
[2025-11-21 22:37:15] 2025-11-21 21:36:13,776 | INFO     | will attempt to kill all subprocesses of pid=1235
[2025-11-21 22:37:15] 2025-11-21 21:36:13,871 | INFO     | process IDs to be killed: [1235] (in reverse order)
[2025-11-21 22:37:15] 2025-11-21 21:36:14,674 | WARNING  | found no corresponding commands to process id(s)
[2025-11-21 22:37:15] 2025-11-21 21:36:14,675 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-21 22:37:15] 2025-11-21 21:36:14,678 | INFO     | did not find any defunct processes belonging to 1235
[2025-11-21 22:37:15] 2025-11-21 21:36:14,682 | INFO     | did not find any defunct processes belonging to 1235
[2025-11-21 22:37:15] 2025-11-21 21:36:14,732 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-21 22:37:15] 2025-11-21 21:36:14,732 | INFO     | ready for new job
[2025-11-21 22:37:15] 2025-11-21 21:36:14,733 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-21 22:37:15] 2025-11-21 21:36:14,740 | INFO     | ***************************************
[2025-11-21 22:37:15] 2025-11-21 21:36:14,740 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-21 22:37:15] 2025-11-21 21:36:14,740 | INFO     | ***************************************
[2025-11-21 22:37:15] 2025-11-21 21:36:14,740 | INFO     | 
[2025-11-21 22:37:15] 2025-11-21 21:36:14,741 | INFO     | pilot is running in a VM
[2025-11-21 22:37:15] 2025-11-21 21:36:14,741 | INFO     | architecture information:
[2025-11-21 22:37:15] 2025-11-21 21:36:14,752 | INFO     | executing command: cat /etc/os-release
[2025-11-21 22:37:15] 2025-11-21 21:36:14,942 | INFO     | cat /etc/os-release:
[2025-11-21 22:37:15] NAME="CentOS Linux"
[2025-11-21 22:37:15] VERSION="7 (Core)"
[2025-11-21 22:37:15] ID="centos"
[2025-11-21 22:37:15] ID_LIKE="rhel fedora"
[2025-11-21 22:37:15] VERSION_ID="7"
[2025-11-21 22:37:15] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-21 22:37:15] ANSI_COLOR="0;31"
[2025-11-21 22:37:15] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-21 22:37:15] HOME_URL="https://www.centos.org/"
[2025-11-21 22:37:15] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-21 22:37:15] 
[2025-11-21 22:37:15] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-21 22:37:15] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-21 22:37:15] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-21 22:37:15] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-21 22:37:15] 
[2025-11-21 22:37:15] 2025-11-21 21:36:14,943 | INFO     | ***************************************
[2025-11-21 22:37:15] 2025-11-21 21:36:15,446 | INFO     | executing command: df -mP /var/lib/boinc/slots/5
[2025-11-21 22:37:15] 2025-11-21 21:36:15,708 | INFO     | sufficient remaining disk space (493689503744 B)
[2025-11-21 22:37:15] 2025-11-21 21:36:15,709 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-21 22:37:15] 2025-11-21 21:36:15,709 | INFO     | current server update state: UPDATING_FINAL
[2025-11-21 22:37:15] 2025-11-21 21:36:15,709 | INFO     | update_server=False
[2025-11-21 22:37:15] 2025-11-21 21:36:15,709 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-21 22:37:15] 2025-11-21 21:36:15,768 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-21 22:37:15] 2025-11-21 21:36:16,055 | INFO     | all job control threads have been joined
[2025-11-21 22:37:15] 2025-11-21 21:36:16,251 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-21 22:37:15] 2025-11-21 21:36:16,251 | INFO     | aborting loop
[2025-11-21 22:37:15] 2025-11-21 21:36:16,375 | INFO     | all payload control threads have been joined
[2025-11-21 22:37:15] 2025-11-21 21:36:16,422 | INFO     | all data control threads have been joined
[2025-11-21 22:37:15] 2025-11-21 21:36:16,715 | INFO     | [job] retrieve thread has finished
[2025-11-21 22:37:15] 2025-11-21 21:36:16,751 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-21 22:37:15] 2025-11-21 21:36:16,805 | INFO     | [payload] validate_post thread has finished
[2025-11-21 22:37:15] 2025-11-21 21:36:16,874 | INFO     | [job] create_data_payload thread has finished
[2025-11-21 22:37:15] 2025-11-21 21:36:16,928 | INFO     | [data] copytool_in thread has finished
[2025-11-21 22:37:15] 2025-11-21 21:36:17,057 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-21 22:37:15] 2025-11-21 21:36:17,061 | INFO     | [job] control thread has finished
[2025-11-21 22:37:15] 2025-11-21 21:36:17,257 | INFO     | [job] job monitor thread has finished
[2025-11-21 22:37:15] 2025-11-21 21:36:17,319 | INFO     | [payload] execute_payloads thread has finished
[2025-11-21 22:37:15] 2025-11-21 21:36:17,382 | INFO     | [payload] control thread has finished
[2025-11-21 22:37:15] 2025-11-21 21:36:17,395 | INFO     | [payload] failed_post thread has finished
[2025-11-21 22:37:15] 2025-11-21 21:36:17,401 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-21 22:37:15] 2025-11-21 21:36:17,429 | INFO     | [data] control thread has finished
[2025-11-21 22:37:15] 2025-11-21 21:36:17,737 | INFO     | [job] validate thread has finished
[2025-11-21 22:37:15] 2025-11-21 21:36:17,775 | INFO     | [data] copytool_out thread has finished
[2025-11-21 22:37:15] 2025-11-21 21:36:18,029 | INFO     | [payload] validate_pre thread has finished
[2025-11-21 22:37:15] 2025-11-21 21:36:18,406 | INFO     | [job] queue monitor thread has finished
[2025-11-21 22:37:15] 2025-11-21 21:36:21,066 | INFO     | [data] queue_monitor thread has finished
[2025-11-21 22:37:15] 2025-11-21 21:36:44,222 | INFO     | PID=27057 has CPU usage=1.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-21 22:37:15] 2025-11-21 21:36:44,222 | INFO     | .. there are 9 such processes running
[2025-11-21 22:37:15] 2025-11-21 21:36:44,223 | INFO     | found 0 job(s) in 20 queues
[2025-11-21 22:37:15] 2025-11-21 21:36:44,223 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-21 22:37:15] 2025-11-21 21:36:44,223 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-21 22:37:15] 2025-11-21 21:37:04,046 | INFO     | [monitor] cgroup control has ended
[2025-11-21 22:37:15] 2025-11-21 21:37:05,186 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140342238824256)>', '<ExcThread(monitor, started 140341797705472)>']
[2025-11-21 22:37:15] 2025-11-21 21:37:05,347 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-21 22:37:15] 2025-11-21 21:37:05,348 | INFO     | [monitor] control thread has ended
[2025-11-21 22:37:15] 2025-11-21 21:37:10,212 | INFO     | all workflow threads have been joined
[2025-11-21 22:37:15] 2025-11-21 21:37:10,212 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-21 22:37:15] 2025-11-21 21:37:10,212 | INFO     | traces error code: 0
[2025-11-21 22:37:15] 2025-11-21 21:37:10,213 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-21 22:37:15] 2025-11-21 21:37:10,580 [wrapper] ==== pilot stdout END ====
[2025-11-21 22:37:15] 2025-11-21 21:37:10,663 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-21 22:37:15] 2025-11-21 21:37:10,768 [wrapper] pilotpid: 27057
[2025-11-21 22:37:15] 2025-11-21 21:37:10,867 [wrapper] Pilot exit status: 0
[2025-11-21 22:37:15] 2025-11-21 21:37:11,399 [wrapper] pandaids: 6891569582
[2025-11-21 22:37:15] 2025-11-21 21:37:12,445 [wrapper] cleanup supervisor_pilot 28504 27058
[2025-11-21 22:37:15] 2025-11-21 21:37:12,532 [wrapper] Test setup, not cleaning
[2025-11-21 22:37:15] 2025-11-21 21:37:12,576 [wrapper] apfmon messages muted
[2025-11-21 22:37:15] 2025-11-21 21:37:12,648 [wrapper] ==== wrapper stdout END ====
[2025-11-21 22:37:15] 2025-11-21 21:37:12,711 [wrapper] ==== wrapper stderr END ====
[2025-11-21 22:37:15]  *** Error codes and diagnostics ***
[2025-11-21 22:37:15]     "exeErrorCode": 0,
[2025-11-21 22:37:15]     "exeErrorDiag": "",
[2025-11-21 22:37:15]     "pilotErrorCode": 0,
[2025-11-21 22:37:15]     "pilotErrorDiag": "",
[2025-11-21 22:37:15]  *** Listing of results directory ***
[2025-11-21 22:37:15] total 1321720
[2025-11-21 22:37:15] -rw-r--r--. 1 boinc boinc    576529 Nov 18 16:15 pilot3.tar.gz
[2025-11-21 22:37:15] -rw-r--r--. 1 boinc boinc      5112 Nov 18 16:35 queuedata.json
[2025-11-21 22:37:15] -rwx------. 1 boinc boinc     36292 Nov 18 16:37 runpilot2-wrapper.sh
[2025-11-21 22:37:15] -rw-r--r--. 1 boinc boinc       100 Nov 20 21:05 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-21 22:37:15] -rwxr-xr-x. 1 boinc boinc      7986 Nov 20 21:05 run_atlas
[2025-11-21 22:37:15] -rw-r--r--. 1 boinc boinc       105 Nov 20 21:05 job.xml
[2025-11-21 22:37:15] -rw-r--r--. 1 boinc boinc      6390 Nov 20 21:05 init_data.xml
[2025-11-21 22:37:15] -rw-r--r--. 2 boinc boinc 408285984 Nov 20 21:05 EVNT.47493065._000211.pool.root.1
[2025-11-21 22:37:15] -rw-r--r--. 2 boinc boinc     15120 Nov 20 21:05 start_atlas.sh
[2025-11-21 22:37:15] drwxrwx--x. 2 boinc boinc        68 Nov 20 21:05 shared
[2025-11-21 22:37:15] -rw-r--r--. 2 boinc boinc    590104 Nov 20 21:05 input.tar.gz
[2025-11-21 22:37:15] -rw-r--r--. 1 boinc boinc         0 Nov 20 21:05 boinc_lockfile
[2025-11-21 22:37:15] -rw-r--r--. 1 boinc boinc      2773 Nov 20 21:05 pandaJob.out
[2025-11-21 22:37:15] -rw-------. 1 boinc boinc    989440 Nov 20 21:09 agis_schedconf.cvmfs.json
[2025-11-21 22:37:15] drwx------. 5 boinc boinc      4096 Nov 20 21:09 pilot3
[2025-11-21 22:37:15] -rw-r--r--. 1 boinc boinc       533 Nov 21 22:09 boinc_task_state.xml
[2025-11-21 22:37:15] -rw-------. 1 boinc boinc 911687955 Nov 21 22:33 HITS.47493068._002108.pool.root.1
[2025-11-21 22:37:15] -rw-------. 1 boinc boinc      1032 Nov 21 22:34 memory_monitor_summary.json
[2025-11-21 22:37:15] -rw-------. 1 boinc boinc   1526164 Nov 21 22:34 agis_ddmendpoints.agis.ALL.json
[2025-11-21 22:37:15] -rw-------. 1 boinc boinc   2569948 Nov 21 22:34 log.47493068._002108.job.log.tgz.1
[2025-11-21 22:37:15] -rw-------. 1 boinc boinc      8637 Nov 21 22:36 heartbeat.json
[2025-11-21 22:37:15] -rw-------. 1 boinc boinc        95 Nov 21 22:36 pilot_heartbeat.json
[2025-11-21 22:37:15] -rw-r--r--. 1 boinc boinc        29 Nov 21 22:36 wrapper_checkpoint.txt
[2025-11-21 22:37:15] -rw-------. 1 boinc boinc      4884 Nov 21 22:37 pilotlog.txt
[2025-11-21 22:37:15] -rw-------. 1 boinc boinc  12205218 Nov 21 22:37 log.47493068._002108.job.log.1
[2025-11-21 22:37:15] -rw-------. 1 boinc boinc       353 Nov 21 22:37 output.list
[2025-11-21 22:37:15] -rw-r--r--. 1 boinc boinc       620 Nov 21 22:37 runtime_log
[2025-11-21 22:37:15] -rw-------. 1 boinc boinc  14796800 Nov 21 22:37 result.tar.gz
[2025-11-21 22:37:15] -rw-r--r--. 1 boinc boinc      8703 Nov 21 22:37 runtime_log.err
[2025-11-21 22:37:15] -rw-------. 1 boinc boinc       662 Nov 21 22:37 2DGMDmnwcf8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmnLFKDmxxzaSm.diag
[2025-11-21 22:37:15] -rw-r--r--. 1 boinc boinc      8192 Nov 21 22:37 boinc_mmap_file
[2025-11-21 22:37:15] -rw-r--r--. 1 boinc boinc     21225 Nov 21 22:37 stderr.txt
[2025-11-21 22:37:15] HITS file was successfully produced:
[2025-11-21 22:37:15] -rw-------. 1 boinc boinc 911687955 Nov 21 22:33 shared/HITS.pool.root.1
[2025-11-21 22:37:15]  *** Contents of shared directory: ***
[2025-11-21 22:37:15] total 1304092
[2025-11-21 22:37:15] -rw-r--r--. 2 boinc boinc 408285984 Nov 20 21:05 ATLAS.root_0
[2025-11-21 22:37:15] -rw-r--r--. 2 boinc boinc     15120 Nov 20 21:05 start_atlas.sh
[2025-11-21 22:37:15] -rw-r--r--. 2 boinc boinc    590104 Nov 20 21:05 input.tar.gz
[2025-11-21 22:37:15] -rw-------. 1 boinc boinc 911687955 Nov 21 22:33 HITS.pool.root.1
[2025-11-21 22:37:15] -rw-------. 1 boinc boinc  14796800 Nov 21 22:37 result.tar.gz
22:37:17 (23267): run_atlas exited; CPU time 335817.329562
22:37:17 (23267): called boinc_finish(0)

</stderr_txt>
]]>

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