Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
09:02:32 (1573915): wrapper (7.7.26015): starting
09:02:32 (1573915): wrapper: running run_atlas (--nthreads 8)
[2025-11-18 09:02:32] Arguments: --nthreads 8
[2025-11-18 09:02:32] Threads: 8
[2025-11-18 09:02:32] Checking for CVMFS
[2025-11-18 09:02:32] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-18 09:02:33] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-18 09:02:33] Running cvmfs_config stat atlas.cern.ch
[2025-11-18 09:02:33] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-18 09:02:33] 2.11.3.0 2884895 17138 224856 153007 2 317 44603419 45568001 12156 130560 0 102279402 99.763 70605017 19397 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.164:3129 1
[2025-11-18 09:02:33] CVMFS is ok
[2025-11-18 09:02:33] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-18 09:02:33] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-18 09:02:33] Further information can be found at the LHC@home message board.
[2025-11-18 09:02:33] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-18 09:02:33] Checking for apptainer binary...
[2025-11-18 09:02:33] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-18 09:02:33] Running /usr/bin/apptainer --version
[2025-11-18 09:02:33] apptainer version 1.4.1-1.el9
[2025-11-18 09:02:33] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-18 09:02:33] wns0017.triumf.lcg
[2025-11-18 09:02:33] apptainer works
[2025-11-18 09:02:33] Set ATHENA_PROC_NUMBER=8
[2025-11-18 09:02:33] Set ATHENA_CORE_NUMBER=8
[2025-11-18 09:02:33] Starting ATLAS job with PandaID=6891570087
[2025-11-18 09:02:33] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-18 09:06:55]  *** The last 200 lines of the pilot log: ***
[2025-11-18 09:06:55] 2025-11-18 17:06:23,410 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-18 09:06:55] 2025-11-18 17:06:23,411 | WARNING  | wrong length of table data, x=[1763485392.0, 1763485453.0], y=[1240.0, 255416.0] (must be same and length>=4)
[2025-11-18 09:06:55] 2025-11-18 17:06:23,412 | INFO     | could have reported an average CPU frequency of 2094 MHz (4 samples)
[2025-11-18 09:06:55] 2025-11-18 17:06:23,412 | INFO     | ..............................
[2025-11-18 09:06:55] 2025-11-18 17:06:23,412 | INFO     | . Timing measurements:
[2025-11-18 09:06:55] 2025-11-18 17:06:23,412 | INFO     | . get job = 0 s
[2025-11-18 09:06:55] 2025-11-18 17:06:23,412 | INFO     | . initial setup = 2 s
[2025-11-18 09:06:55] 2025-11-18 17:06:23,412 | INFO     | . payload setup = 6 s
[2025-11-18 09:06:55] 2025-11-18 17:06:23,412 | INFO     | . stage-in = 0 s
[2025-11-18 09:06:55] 2025-11-18 17:06:23,412 | INFO     | . payload execution = 68 s
[2025-11-18 09:06:55] 2025-11-18 17:06:23,412 | INFO     | . stage-out = 0 s
[2025-11-18 09:06:55] 2025-11-18 17:06:23,412 | INFO     | . log creation = 0 s
[2025-11-18 09:06:55] 2025-11-18 17:06:23,412 | INFO     | ..............................
[2025-11-18 09:06:55] 2025-11-18 17:06:23,413 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-18 09:06:55] 2025-11-18 17:06:23,413 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6891570087/pilotlog.txt
[2025-11-18 09:06:55] 2025-11-18 17:06:23,426 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-11-18 09:06:55] - Log from pilotlog.txt -
[2025-11-18 09:06:55] 2025-11-18 17:06:23,408 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6891570087/memory_monitor_summary.json (trf name=prmon)
[2025-11-18 09:06:55] 2025-11-18 17:06:23,409 | INFO     | extracted standard info from prmon json
[2025-11-18 09:06:55] 2025-11-18 17:06:23,409 | INFO     | extracted standard memory fields from prmon json
[2025-11-18 09:06:55] 2025-11-18 17:06:23,409 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-18 09:06:55] 2025-11-18 17:06:23,410 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-11-18 09:06:55] 2025-11-18 17:06:23,410 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-18 09:06:55] 2025-11-18 17:06:23,411 | WARNING  | wrong length of table data, x=[1763485392.0, 1763485453.0], y=[1240.0, 255416.0] (must be same and length>=4)
[2025-11-18 09:06:55] 2025-11-18 17:06:23,412 | INFO     | could have reported an average CPU frequency of 2094 MHz (4 samples)
[2025-11-18 09:06:55] 2025-11-18 17:06:23,412 | INFO     | ..............................
[2025-11-18 09:06:55] 2025-11-18 17:06:23,412 | INFO     | . Timing measurements:
[2025-11-18 09:06:55] 2025-11-18 17:06:23,412 | INFO     | . get job = 0 s
[2025-11-18 09:06:55] 2025-11-18 17:06:23,412 | INFO     | . initial setup = 2 s
[2025-11-18 09:06:55] 2025-11-18 17:06:23,412 | INFO     | . payload setup = 6 s
[2025-11-18 09:06:55] 2025-11-18 17:06:23,412 | INFO     | . stage-in = 0 s
[2025-11-18 09:06:55] 2025-11-18 17:06:23,412 | INFO     | . payload execution = 68 s
[2025-11-18 09:06:55] 2025-11-18 17:06:23,412 | INFO     | . stage-out = 0 s
[2025-11-18 09:06:55] 2025-11-18 17:06:23,412 | INFO     | . log creation = 0 s
[2025-11-18 09:06:55] 2025-11-18 17:06:23,412 | INFO     | ..............................
[2025-11-18 09:06:55] 2025-11-18 17:06:23,413 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-18 09:06:55] 2025-11-18 17:06:23,413 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6891570087/pilotlog.txt
[2025-11-18 09:06:55] 2025-11-18 17:06:23,426 | WARNING  | 
[2025-11-18 09:06:55] [begin log extracts]
[2025-11-18 09:06:55] - Log from pilotlog.txt -
[2025-11-18 09:06:55] 2025-11-18 17:06:23,408 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6891570087/memory_monitor_summary.json (trf name=prmon)
[2025-11-18 09:06:55] 2025-11-18 17:06:23,409 | INFO     | extracted standard info from prmon json
[2025-11-18 09:06:55] 2025-11-18 17:06:23,409 | INFO     | extracted standard memory fields from prmon json
[2025-11-18 09:06:55] 2025-11-18 17:06:23,409 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-18 09:06:55] 2025-11-18 17:06:23,410 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-11-18 09:06:55] 2025-11-18 17:06:23,410 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-18 09:06:55] 2025-11-18 17:06:23,411 | WARNING  | wrong length of table data, x=[1763485392.0, 1763485453.0], y=[1240.0, 255416.0] (must be same and length>=4)
[2025-11-18 09:06:55] 2025-11-18 17:06:23,412 | INFO     | could have reported an average CPU frequency of 2094 MHz (4 samples)
[2025-11-18 09:06:55] 2025-11-18 17:06:23,412 | INFO     | ..............................
[2025-11-18 09:06:55] 2025-11-18 17:06:23,412 | INFO     | . Timing measurements:
[2025-11-18 09:06:55] 2025-11-18 17:06:23,412 | INFO     | . get job = 0 s
[2025-11-18 09:06:55] 2025-11-18 17:06:23,412 | INFO     | . initial setup = 2 s
[2025-11-18 09:06:55] 2025-11-18 17:06:23,412 | INFO     | . payload setup = 6 s
[2025-11-18 09:06:55] 2025-11-18 17:06:23,412 | INFO     | . stage-in = 0 s
[2025-11-18 09:06:55] 2025-11-18 17:06:23,412 | INFO     | . payload execution = 68 s
[2025-11-18 09:06:55] 2025-11-18 17:06:23,412 | INFO     | . stage-out = 0 s
[2025-11-18 09:06:55] 2025-11-18 17:06:23,412 | INFO     | . log creation = 0 s
[2025-11-18 09:06:55] 2025-11-18 17:06:23,412 | INFO     | ..............................
[2025-11-18 09:06:55] 2025-11-18 17:06:23,413 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-18 09:06:55] 2025-11-18 17:06:23,413 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6891570087/pilotlog.txt
[2025-11-18 09:06:55] [end log extracts]
[2025-11-18 09:06:55] 2025-11-18 17:06:23,427 | WARNING  | pilotErrorCodes = [1305, 1165] (will report primary/first error code)
[2025-11-18 09:06:55] 2025-11-18 17:06:23,427 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-11-18 09:06:55] 2025-11-18 17:06:23,658 | INFO     | 
[2025-11-18 09:06:55] 2025-11-18 17:06:23,658 | INFO     | job summary report
[2025-11-18 09:06:55] 2025-11-18 17:06:23,658 | INFO     | --------------------------------------------------
[2025-11-18 09:06:55] 2025-11-18 17:06:23,658 | INFO     | PanDA job id: 6891570087
[2025-11-18 09:06:55] 2025-11-18 17:06:23,659 | INFO     | task id: 47493068
[2025-11-18 09:06:55] 2025-11-18 17:06:23,659 | INFO     | error 1/2: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-11-18 09:04:10,180 CRITICAL Transform executor raised TransformValidationExceptio
[2025-11-18 09:06:55] 2025-11-18 17:06:23,659 | INFO     | error 2/2: 1165: Local output file is missing
[2025-11-18 09:06:55] 2025-11-18 17:06:23,659 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-18 09:06:55] 2025-11-18 17:06:23,659 | INFO     | pilot state: failed 
[2025-11-18 09:06:55] 2025-11-18 17:06:23,659 | INFO     | transexitcode: 65
[2025-11-18 09:06:55] 2025-11-18 17:06:23,659 | INFO     | exeerrorcode: 65
[2025-11-18 09:06:55] 2025-11-18 17:06:23,659 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: "IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFL
[2025-11-18 09:06:55] 2025-11-18 17:06:23,659 | INFO     | exitcode: 65
[2025-11-18 09:06:55] 2025-11-18 17:06:23,659 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: "IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 
[2025-11-18 09:06:55] 2025-11-18 17:06:23,659 | INFO     | cpuconsumptiontime: 49 s
[2025-11-18 09:06:55] 2025-11-18 17:06:23,659 | INFO     | nevents: 0
[2025-11-18 09:06:55] 2025-11-18 17:06:23,659 | INFO     | neventsw: 0
[2025-11-18 09:06:55] 2025-11-18 17:06:23,659 | INFO     | pid: 1584127
[2025-11-18 09:06:55] 2025-11-18 17:06:23,660 | INFO     | pgrp: 1584127
[2025-11-18 09:06:55] 2025-11-18 17:06:23,660 | INFO     | corecount: 8
[2025-11-18 09:06:55] 2025-11-18 17:06:23,660 | INFO     | event service: False
[2025-11-18 09:06:55] 2025-11-18 17:06:23,660 | INFO     | sizes: {0: 2297191, 1: 2297191, 5: 2297481, 11: 2297537, 77: 2322943, 78: 2327233, 81: 2327417, 203: 2327583}
[2025-11-18 09:06:55] 2025-11-18 17:06:23,660 | INFO     | --------------------------------------------------
[2025-11-18 09:06:55] 2025-11-18 17:06:23,660 | INFO     | 
[2025-11-18 09:06:55] 2025-11-18 17:06:23,660 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-11-18 09:06:55] 2025-11-18 17:06:23,679 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-18 09:06:55] 2025-11-18 17:06:23,679 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-18 09:06:55] 2025-11-18 17:06:23,679 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-18 09:06:55] 2025-11-18 17:06:23,679 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-18 09:06:55] 2025-11-18 17:06:23,679 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-18 09:06:55] 2025-11-18 17:06:23,679 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-18 09:06:55] 2025-11-18 17:06:23,679 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-18 09:06:55] 2025-11-18 17:06:23,679 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-18 09:06:55] 2025-11-18 17:06:23,679 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-18 09:06:55] 2025-11-18 17:06:23,680 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-18 09:06:55] 2025-11-18 17:06:23,680 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-18 09:06:55] 2025-11-18 17:06:23,680 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-18 09:06:55] 2025-11-18 17:06:23,680 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-18 09:06:55] 2025-11-18 17:06:23,680 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-18 09:06:55] 2025-11-18 17:06:23,680 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-18 09:06:55] 2025-11-18 17:06:23,680 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-18 09:06:55] 2025-11-18 17:06:23,680 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-18 09:06:55] 2025-11-18 17:06:23,680 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-18 09:06:55] 2025-11-18 17:06:23,680 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-18 09:06:55] 2025-11-18 17:06:23,680 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-18 09:06:55] 2025-11-18 17:06:23,680 | INFO     | job 6891570087 has completed (purged errors)
[2025-11-18 09:06:55] 2025-11-18 17:06:23,681 | INFO     | overall cleanup function is called
[2025-11-18 09:06:55] 2025-11-18 17:06:24,688 | INFO     | --- collectZombieJob: --- 10, [1584127]
[2025-11-18 09:06:55] 2025-11-18 17:06:24,688 | INFO     | zombie collector waiting for pid 1584127
[2025-11-18 09:06:55] 2025-11-18 17:06:24,688 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-18 09:06:55] 2025-11-18 17:06:24,689 | INFO     | collected zombie processes
[2025-11-18 09:06:55] 2025-11-18 17:06:24,689 | INFO     | will attempt to kill all subprocesses of pid=1584127
[2025-11-18 09:06:55] 2025-11-18 17:06:24,905 | INFO     | process IDs to be killed: [1584127] (in reverse order)
[2025-11-18 09:06:55] 2025-11-18 17:06:24,974 | WARNING  | found no corresponding commands to process id(s)
[2025-11-18 09:06:55] 2025-11-18 17:06:24,975 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-18 09:06:55] 2025-11-18 17:06:24,984 | INFO     | did not find any defunct processes belonging to 1584127
[2025-11-18 09:06:55] 2025-11-18 17:06:24,991 | INFO     | did not find any defunct processes belonging to 1584127
[2025-11-18 09:06:55] 2025-11-18 17:06:24,992 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-18 09:06:55] 2025-11-18 17:06:24,992 | INFO     | ready for new job
[2025-11-18 09:06:55] 2025-11-18 17:06:24,992 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-18 09:06:55] 2025-11-18 17:06:24,993 | INFO     | ***************************************
[2025-11-18 09:06:55] 2025-11-18 17:06:24,994 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-18 09:06:55] 2025-11-18 17:06:24,994 | INFO     | ***************************************
[2025-11-18 09:06:55] 2025-11-18 17:06:24,994 | INFO     | 
[2025-11-18 09:06:55] 2025-11-18 17:06:24,995 | INFO     | architecture information:
[2025-11-18 09:06:55] 2025-11-18 17:06:24,996 | INFO     | executing command: cat /etc/os-release
[2025-11-18 09:06:55] 2025-11-18 17:06:25,013 | INFO     | cat /etc/os-release:
[2025-11-18 09:06:55] NAME="CentOS Linux"
[2025-11-18 09:06:55] VERSION="7 (Core)"
[2025-11-18 09:06:55] ID="centos"
[2025-11-18 09:06:55] ID_LIKE="rhel fedora"
[2025-11-18 09:06:55] VERSION_ID="7"
[2025-11-18 09:06:55] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-18 09:06:55] ANSI_COLOR="0;31"
[2025-11-18 09:06:55] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-18 09:06:55] HOME_URL="https://www.centos.org/"
[2025-11-18 09:06:55] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-18 09:06:55] 
[2025-11-18 09:06:55] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-18 09:06:55] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-18 09:06:55] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-18 09:06:55] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-18 09:06:55] 
[2025-11-18 09:06:55] 2025-11-18 17:06:25,013 | INFO     | ***************************************
[2025-11-18 09:06:55] 2025-11-18 17:06:25,515 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-11-18 09:06:55] 2025-11-18 17:06:25,530 | INFO     | sufficient remaining disk space (1450451140608 B)
[2025-11-18 09:06:55] 2025-11-18 17:06:25,531 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-18 09:06:55] 2025-11-18 17:06:25,531 | INFO     | current server update state: UPDATING_FINAL
[2025-11-18 09:06:55] 2025-11-18 17:06:25,531 | INFO     | update_server=False
[2025-11-18 09:06:55] 2025-11-18 17:06:25,531 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-18 09:06:55] 2025-11-18 17:06:25,532 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-18 09:06:55] 2025-11-18 17:06:25,532 | INFO     | aborting loop
[2025-11-18 09:06:55] 2025-11-18 17:06:25,798 | INFO     | all data control threads have been joined
[2025-11-18 09:06:55] 2025-11-18 17:06:25,839 | INFO     | all job control threads have been joined
[2025-11-18 09:06:55] 2025-11-18 17:06:26,224 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-18 09:06:55] 2025-11-18 17:06:26,536 | INFO     | [job] retrieve thread has finished
[2025-11-18 09:06:55] 2025-11-18 17:06:26,538 | INFO     | [job] job monitor thread has finished
[2025-11-18 09:06:55] 2025-11-18 17:06:26,591 | INFO     | [payload] validate_pre thread has finished
[2025-11-18 09:06:55] 2025-11-18 17:06:26,606 | INFO     | [payload] failed_post thread has finished
[2025-11-18 09:06:55] 2025-11-18 17:06:26,751 | INFO     | [data] copytool_in thread has finished
[2025-11-18 09:06:55] 2025-11-18 17:06:26,781 | INFO     | all payload control threads have been joined
[2025-11-18 09:06:55] 2025-11-18 17:06:26,804 | INFO     | [data] control thread has finished
[2025-11-18 09:06:55] 2025-11-18 17:06:26,844 | INFO     | [job] control thread has finished
[2025-11-18 09:06:55] 2025-11-18 17:06:27,294 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-18 09:06:55] 2025-11-18 17:06:27,469 | INFO     | [payload] validate_post thread has finished
[2025-11-18 09:06:55] 2025-11-18 17:06:27,479 | INFO     | [payload] execute_payloads thread has finished
[2025-11-18 09:06:55] 2025-11-18 17:06:27,745 | INFO     | [job] validate thread has finished
[2025-11-18 09:06:55] 2025-11-18 17:06:27,786 | INFO     | [payload] control thread has finished
[2025-11-18 09:06:55] 2025-11-18 17:06:27,943 | INFO     | [job] create_data_payload thread has finished
[2025-11-18 09:06:55] 2025-11-18 17:06:28,229 | INFO     | [data] copytool_out thread has finished
[2025-11-18 09:06:55] 2025-11-18 17:06:28,367 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-18 09:06:55] 2025-11-18 17:06:28,513 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-18 09:06:55] 2025-11-18 17:06:29,518 | INFO     | [job] queue monitor thread has finished
[2025-11-18 09:06:55] 2025-11-18 17:06:32,373 | INFO     | [data] queue_monitor thread has finished
[2025-11-18 09:06:55] 2025-11-18 17:06:43,974 | INFO     | [monitor] cgroup control has ended
[2025-11-18 09:06:55] 2025-11-18 17:06:46,047 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140536162985792)>', '<ExcThread(monitor, started 140535842969344)>']
[2025-11-18 09:06:55] 2025-11-18 17:06:51,073 | INFO     | all workflow threads have been joined
[2025-11-18 09:06:55] 2025-11-18 17:06:51,073 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-18 09:06:55] 2025-11-18 17:06:51,074 | INFO     | traces error code: 0
[2025-11-18 09:06:55] 2025-11-18 17:06:51,074 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-18 09:06:55] 2025-11-18 17:06:55,102 | INFO     | PID=1577590 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-18 09:06:55] 2025-11-18 17:06:55,102 | INFO     | .. there are 26 such processes running
[2025-11-18 09:06:55] 2025-11-18 17:06:55,103 | INFO     | found 0 job(s) in 20 queues
[2025-11-18 09:06:55] 2025-11-18 17:06:55,103 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-18 09:06:55] 2025-11-18 17:06:55,103 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-18 09:06:55] 2025-11-18 17:06:55,103 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-18 09:06:55] 2025-11-18 17:06:55,103 | INFO     | [monitor] control thread has ended
[2025-11-18 09:06:55] 2025-11-18 17:06:55,237 [wrapper] ==== pilot stdout END ====
[2025-11-18 09:06:55] 2025-11-18 17:06:55,239 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-18 09:06:55] 2025-11-18 17:06:55,241 [wrapper] pilotpid: 1577590
[2025-11-18 09:06:55] 2025-11-18 17:06:55,243 [wrapper] Pilot exit status: 0
[2025-11-18 09:06:55] 2025-11-18 17:06:55,253 [wrapper] pandaids: 6891570087
[2025-11-18 09:06:55] 2025-11-18 17:06:55,293 [wrapper] cleanup supervisor_pilot 1577596 1577591
[2025-11-18 09:06:55] 2025-11-18 17:06:55,295 [wrapper] Test setup, not cleaning
[2025-11-18 09:06:55] 2025-11-18 17:06:55,298 [wrapper] apfmon messages muted
[2025-11-18 09:06:55] 2025-11-18 17:06:55,300 [wrapper] ==== wrapper stdout END ====
[2025-11-18 09:06:55] 2025-11-18 17:06:55,303 [wrapper] ==== wrapper stderr END ====
[2025-11-18 09:06:55]  *** Error codes and diagnostics ***
[2025-11-18 09:06:55]     "exeErrorCode": 65,
[2025-11-18 09:06:55]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: \"IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 cannot be opened - STOP\"",
[2025-11-18 09:06:55]     "pilotErrorCode": 1305,
[2025-11-18 09:06:55]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: \"IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 canno",
[2025-11-18 09:06:55]  *** Listing of results directory ***
[2025-11-18 09:06:55] total 402744
[2025-11-18 09:06:55] -rw-r--r--. 1 boinc boinc    576529 Nov 18 07:15 pilot3.tar.gz
[2025-11-18 09:06:55] -rwx------. 1 boinc boinc     36292 Nov 18 07:35 runpilot2-wrapper.sh
[2025-11-18 09:06:55] -rw-r--r--. 1 boinc boinc      5112 Nov 18 07:35 queuedata.json
[2025-11-18 09:06:55] -rw-r--r--. 1 boinc boinc       100 Nov 18 09:02 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-18 09:06:55] -rwxr-xr-x. 1 boinc boinc      7986 Nov 18 09:02 run_atlas
[2025-11-18 09:06:55] -rw-r--r--. 1 boinc boinc       105 Nov 18 09:02 job.xml
[2025-11-18 09:06:55] -rw-r--r--. 1 boinc boinc      6445 Nov 18 09:02 init_data.xml
[2025-11-18 09:06:55] -rw-r--r--. 2 boinc boinc 408204195 Nov 18 09:02 EVNT.47493065._000230.pool.root.1
[2025-11-18 09:06:55] -rw-r--r--. 2 boinc boinc    590101 Nov 18 09:02 input.tar.gz
[2025-11-18 09:06:55] -rw-r--r--. 2 boinc boinc     15120 Nov 18 09:02 start_atlas.sh
[2025-11-18 09:06:55] drwxrwx--x. 2 boinc boinc      4096 Nov 18 09:02 shared
[2025-11-18 09:06:55] -rw-r--r--. 1 boinc boinc         0 Nov 18 09:02 boinc_lockfile
[2025-11-18 09:06:55] -rw-r--r--. 1 boinc boinc      2770 Nov 18 09:02 pandaJob.out
[2025-11-18 09:06:55] -rw-------. 1 boinc boinc    992798 Nov 18 09:02 agis_schedconf.cvmfs.json
[2025-11-18 09:06:55] -rw-------. 1 boinc boinc   1525063 Nov 18 09:02 agis_ddmendpoints.agis.ALL.json
[2025-11-18 09:06:55] drwx------. 5 boinc boinc      4096 Nov 18 09:02 pilot3
[2025-11-18 09:06:55] -rw-r--r--. 1 boinc boinc       523 Nov 18 09:03 boinc_task_state.xml
[2025-11-18 09:06:55] -rw-------. 1 boinc boinc       986 Nov 18 09:04 memory_monitor_summary.json
[2025-11-18 09:06:55] -rw-------. 1 boinc boinc     48498 Nov 18 09:04 log.47493068._002291.job.log.tgz.1
[2025-11-18 09:06:55] -rw-------. 1 boinc boinc     10322 Nov 18 09:06 heartbeat.json
[2025-11-18 09:06:55] -rw-r--r--. 1 boinc boinc      8192 Nov 18 09:06 boinc_mmap_file
[2025-11-18 09:06:55] -rw-r--r--. 1 boinc boinc        23 Nov 18 09:06 wrapper_checkpoint.txt
[2025-11-18 09:06:55] -rw-------. 1 boinc boinc        95 Nov 18 09:06 pilot_heartbeat.json
[2025-11-18 09:06:55] -rw-------. 1 boinc boinc       823 Nov 18 09:06 pilotlog.txt
[2025-11-18 09:06:55] -rw-------. 1 boinc boinc     94673 Nov 18 09:06 log.47493068._002291.job.log.1
[2025-11-18 09:06:55] -rw-------. 1 boinc boinc       186 Nov 18 09:06 output.list
[2025-11-18 09:06:55] -rw-r--r--. 1 boinc boinc       620 Nov 18 09:06 runtime_log
[2025-11-18 09:06:55] -rw-------. 1 boinc boinc    163840 Nov 18 09:06 result.tar.gz
[2025-11-18 09:06:55] -rw-r--r--. 1 boinc boinc      8526 Nov 18 09:06 runtime_log.err
[2025-11-18 09:06:55] -rw-------. 1 boinc boinc       646 Nov 18 09:06 rfHMDmgucf8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmdLFKDmNlKMKm.diag
[2025-11-18 09:06:55] -rw-r--r--. 1 boinc boinc     22471 Nov 18 09:06 stderr.txt
[2025-11-18 09:06:55] No HITS result produced
[2025-11-18 09:06:55]  *** Contents of shared directory: ***
[2025-11-18 09:06:55] total 399400
[2025-11-18 09:06:55] -rw-r--r--. 2 boinc boinc 408204195 Nov 18 09:02 ATLAS.root_0
[2025-11-18 09:06:55] -rw-r--r--. 2 boinc boinc    590101 Nov 18 09:02 input.tar.gz
[2025-11-18 09:06:55] -rw-r--r--. 2 boinc boinc     15120 Nov 18 09:02 start_atlas.sh
[2025-11-18 09:06:55] -rw-------. 1 boinc boinc    163840 Nov 18 09:06 result.tar.gz
09:06:56 (1573915): run_atlas exited; CPU time 48.875907
09:06:56 (1573915): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN