Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
20:41:36 (8704): wrapper (7.7.26015): starting
20:41:36 (8704): wrapper: running run_atlas (--nthreads 8)
[2025-11-20 20:41:37] Arguments: --nthreads 8
[2025-11-20 20:41:37] Threads: 8
[2025-11-20 20:41:37] Checking for CVMFS
[2025-11-20 20:41:37] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-20 20:41:38] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-20 20:41:38] Running cvmfs_config stat atlas.cern.ch
[2025-11-20 20:41:39] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-20 20:41:39] 2.11.2.0 23762 277183 141284 153088 2 232 23432272 25165824 4632 130560 2 127852568 99.866 83978326 3304 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-11-20 20:41:39] CVMFS is ok
[2025-11-20 20:41:39] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-20 20:41:39] Checking for apptainer binary...
[2025-11-20 20:41:39] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-20 20:41:39] Running /usr/bin/apptainer --version
[2025-11-20 20:41:40] apptainer version 1.3.2-1.el7
[2025-11-20 20:41:40] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-20 20:41:42] cg-vwn242.simple-grid.lan
[2025-11-20 20:41:42] apptainer works
[2025-11-20 20:41:42] Set ATHENA_PROC_NUMBER=8
[2025-11-20 20:41:42] Set ATHENA_CORE_NUMBER=8
[2025-11-20 20:41:42] Starting ATLAS job with PandaID=6891568289
[2025-11-20 20:41:42] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/8 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-21 22:11:17]  *** The last 200 lines of the pilot log: ***
[2025-11-21 22:11:17] 2025-11-21 21:10:09,897 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-21 22:11:17] 2025-11-21 21:10:11,084 | INFO     | time since job start (91482s) is within the limit (172800.0s)
[2025-11-21 22:11:17] 2025-11-21 21:10:12,408 | INFO     | monitor loop #6154: job 0:6891568289 is in state 'finished'
[2025-11-21 22:11:17] 2025-11-21 21:10:12,408 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-21 22:11:17] 2025-11-21 21:10:13,092 | INFO     | time since job start (91484s) is within the limit (172800.0s)
[2025-11-21 22:11:17] 2025-11-21 21:10:14,912 | INFO     | monitor loop #6155: job 0:6891568289 is in state 'finished'
[2025-11-21 22:11:17] 2025-11-21 21:10:14,912 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-21 22:11:17] 2025-11-21 21:10:15,100 | INFO     | time since job start (91486s) is within the limit (172800.0s)
[2025-11-21 22:11:17] 2025-11-21 21:10:17,106 | INFO     | time since job start (91488s) is within the limit (172800.0s)
[2025-11-21 22:11:17] 2025-11-21 21:10:17,418 | INFO     | monitor loop #6156: job 0:6891568289 is in state 'finished'
[2025-11-21 22:11:17] 2025-11-21 21:10:17,418 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-21 22:11:17] 2025-11-21 21:10:19,115 | INFO     | time since job start (91490s) is within the limit (172800.0s)
[2025-11-21 22:11:17] 2025-11-21 21:10:19,923 | INFO     | monitor loop #6157: job 0:6891568289 is in state 'finished'
[2025-11-21 22:11:17] 2025-11-21 21:10:19,924 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-21 22:11:17] 2025-11-21 21:10:20,263 | INFO     | PID=12470 has CPU usage=1.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-21 22:11:17] 2025-11-21 21:10:20,263 | INFO     | .. there are 9 such processes running
[2025-11-21 22:11:17] 2025-11-21 21:10:20,390 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-21 22:11:17] 2025-11-21 21:10:20,392 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2025-11-21 22:11:17] 2025-11-21 21:10:20,393 | INFO     | using path: /var/lib/boinc/slots/8/PanDA_Pilot-6891568289/memory_monitor_summary.json (trf name=prmon)
[2025-11-21 22:11:17] 2025-11-21 21:10:20,394 | INFO     | extracted standard info from prmon json
[2025-11-21 22:11:17] 2025-11-21 21:10:20,395 | INFO     | extracted standard memory fields from prmon json
[2025-11-21 22:11:17] 2025-11-21 21:10:20,395 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-21 22:11:17] 2025-11-21 21:10:20,423 | INFO     | fitting pss+swap vs Time
[2025-11-21 22:11:17] 2025-11-21 21:10:20,426 | INFO     | sum of square deviations: 1025739123905.7435
[2025-11-21 22:11:17] 2025-11-21 21:10:20,485 | INFO     | sum of deviations: 3248827404960.7974
[2025-11-21 22:11:17] 2025-11-21 21:10:20,486 | INFO     | mean x: 1763713877.6845639
[2025-11-21 22:11:17] 2025-11-21 21:10:20,486 | INFO     | mean y: 2850481.095302013
[2025-11-21 22:11:17] 2025-11-21 21:10:20,486 | INFO     | intersect: -5583367151.428018
[2025-11-21 22:11:17] 2025-11-21 21:10:20,488 | INFO     | chi2: 21.811712700500923
[2025-11-21 22:11:17] 2025-11-21 21:10:20,490 | INFO     | sum of square deviations: 1015448036701.2063
[2025-11-21 22:11:17] 2025-11-21 21:10:20,555 | INFO     | sum of deviations: 3732404659953.7734
[2025-11-21 22:11:17] 2025-11-21 21:10:20,556 | INFO     | mean x: 1763713725.1885521
[2025-11-21 22:11:17] 2025-11-21 21:10:20,556 | INFO     | mean y: 2857645.657912458
[2025-11-21 22:11:17] 2025-11-21 21:10:20,556 | INFO     | intersect: -6479889958.151957
[2025-11-21 22:11:17] 2025-11-21 21:10:20,558 | INFO     | chi2: 18.773730474456777
[2025-11-21 22:11:17] 2025-11-21 21:10:20,558 | INFO     | current chi2=18.773730474456777 (change=13.928214935521211 %)
[2025-11-21 22:11:17] 2025-11-21 21:10:20,558 | INFO     | right removable region: 1484
[2025-11-21 22:11:17] 2025-11-21 21:10:20,560 | INFO     | sum of square deviations: 1015446960051.2054
[2025-11-21 22:11:17] 2025-11-21 21:10:20,634 | INFO     | sum of deviations: 2624014830781.598
[2025-11-21 22:11:17] 2025-11-21 21:10:20,634 | INFO     | mean x: 1763714030.1885521
[2025-11-21 22:11:17] 2025-11-21 21:10:20,634 | INFO     | mean y: 2859738.5764309764
[2025-11-21 22:11:17] 2025-11-21 21:10:20,634 | INFO     | intersect: -4554750805.886639
[2025-11-21 22:11:17] 2025-11-21 21:10:20,636 | INFO     | chi2: 17.111610216236066
[2025-11-21 22:11:17] 2025-11-21 21:10:20,636 | INFO     | current chi2=17.111610216236066 (change=21.548525550480573 %)
[2025-11-21 22:11:17] 2025-11-21 21:10:20,636 | INFO     | left removable region: 10
[2025-11-21 22:11:17] 2025-11-21 21:10:20,639 | INFO     | sum of square deviations: 993048294243.055
[2025-11-21 22:11:17] 2025-11-21 21:10:20,703 | INFO     | sum of deviations: 2666887174570.381
[2025-11-21 22:11:17] 2025-11-21 21:10:20,704 | INFO     | mean x: 1763713999.697422
[2025-11-21 22:11:17] 2025-11-21 21:10:20,704 | INFO     | mean y: 2876781.4402985075
[2025-11-21 22:11:17] 2025-11-21 21:10:20,704 | INFO     | intersect: -4733676589.298427
[2025-11-21 22:11:17] 2025-11-21 21:10:20,706 | INFO     | chi2: 9.80433510813515
[2025-11-21 22:11:17] 2025-11-21 21:10:20,707 | INFO     | current memory leak: 2.69 B/s (using 1474 data points, chi2=9.80)
[2025-11-21 22:11:17] 2025-11-21 21:10:20,709 | INFO     | could have reported an average CPU frequency of 1999 MHz (50 samples)
[2025-11-21 22:11:17] 2025-11-21 21:10:20,710 | INFO     | ..............................
[2025-11-21 22:11:17] 2025-11-21 21:10:20,710 | INFO     | . Timing measurements:
[2025-11-21 22:11:17] 2025-11-21 21:10:20,710 | INFO     | . get job = 0 s
[2025-11-21 22:11:17] 2025-11-21 21:10:20,710 | INFO     | . initial setup = 10 s
[2025-11-21 22:11:17] 2025-11-21 21:10:20,710 | INFO     | . payload setup = 171 s
[2025-11-21 22:11:17] 2025-11-21 21:10:20,710 | INFO     | . stage-in = 0 s
[2025-11-21 22:11:17] 2025-11-21 21:10:20,710 | INFO     | . payload execution = 91013 s
[2025-11-21 22:11:17] 2025-11-21 21:10:20,710 | INFO     | . stage-out = 5 s
[2025-11-21 22:11:17] 2025-11-21 21:10:20,710 | INFO     | . log creation = 2 s
[2025-11-21 22:11:17] 2025-11-21 21:10:20,711 | INFO     | ..............................
[2025-11-21 22:11:17] 2025-11-21 21:10:20,862 | INFO     | 
[2025-11-21 22:11:17] 2025-11-21 21:10:20,862 | INFO     | job summary report
[2025-11-21 22:11:17] 2025-11-21 21:10:20,862 | INFO     | --------------------------------------------------
[2025-11-21 22:11:17] 2025-11-21 21:10:20,862 | INFO     | PanDA job id: 6891568289
[2025-11-21 22:11:17] 2025-11-21 21:10:20,863 | INFO     | task id: 47493068
[2025-11-21 22:11:17] 2025-11-21 21:10:20,863 | INFO     | errors: (none)
[2025-11-21 22:11:17] 2025-11-21 21:10:20,863 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-21 22:11:17] 2025-11-21 21:10:20,863 | INFO     | pilot state: finished 
[2025-11-21 22:11:17] 2025-11-21 21:10:20,863 | INFO     | transexitcode: 0
[2025-11-21 22:11:17] 2025-11-21 21:10:20,863 | INFO     | exeerrorcode: 0
[2025-11-21 22:11:17] 2025-11-21 21:10:20,863 | INFO     | exeerrordiag: 
[2025-11-21 22:11:17] 2025-11-21 21:10:20,863 | INFO     | exitcode: 0
[2025-11-21 22:11:17] 2025-11-21 21:10:20,863 | INFO     | exitmsg: OK
[2025-11-21 22:11:17] 2025-11-21 21:10:20,864 | INFO     | cpuconsumptiontime: 336303 s
[2025-11-21 22:11:17] 2025-11-21 21:10:20,864 | INFO     | nevents: 1000
[2025-11-21 22:11:17] 2025-11-21 21:10:20,864 | INFO     | neventsw: 0
[2025-11-21 22:11:17] 2025-11-21 21:10:20,864 | INFO     | pid: 19072
[2025-11-21 22:11:17] 2025-11-21 21:10:20,864 | INFO     | pgrp: 19072
[2025-11-21 22:11:17] 2025-11-21 21:10:20,864 | INFO     | corecount: 8
[2025-11-21 22:11:17] 2025-11-21 21:10:20,864 | INFO     | event service: False
[2025-11-21 22:11:17] 2025-11-21 21:10:20,864 | INFO     | sizes: {0: 2298569, 1: 2298824, 12: 2298824, 23: 2298852, 34: 2298880, 44: 2298908, 55: 2299064, 66: 2299092, 77: 2299120, 87: 2299176, 94: 2299466, 98: 2299774, 9
[2025-11-21 22:11:17] 2025-11-21 21:10:20,864 | INFO     | --------------------------------------------------
[2025-11-21 22:11:17] 2025-11-21 21:10:20,864 | INFO     | 
[2025-11-21 22:11:17] 2025-11-21 21:10:20,865 | INFO     | executing command: ls -lF /var/lib/boinc/slots/8
[2025-11-21 22:11:17] 2025-11-21 21:10:21,084 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-21 22:11:17] 2025-11-21 21:10:21,084 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-21 22:11:17] 2025-11-21 21:10:21,084 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-21 22:11:17] 2025-11-21 21:10:21,084 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-21 22:11:17] 2025-11-21 21:10:21,084 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-21 22:11:17] 2025-11-21 21:10:21,085 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-21 22:11:17] 2025-11-21 21:10:21,085 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-21 22:11:17] 2025-11-21 21:10:21,085 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-21 22:11:17] 2025-11-21 21:10:21,085 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-21 22:11:17] 2025-11-21 21:10:21,085 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-21 22:11:17] 2025-11-21 21:10:21,085 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-21 22:11:17] 2025-11-21 21:10:21,085 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-21 22:11:17] 2025-11-21 21:10:21,085 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-21 22:11:17] 2025-11-21 21:10:21,085 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-21 22:11:17] 2025-11-21 21:10:21,086 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-21 22:11:17] 2025-11-21 21:10:21,086 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-21 22:11:17] 2025-11-21 21:10:21,086 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-21 22:11:17] 2025-11-21 21:10:21,086 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-21 22:11:17] 2025-11-21 21:10:21,086 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-21 22:11:17] 2025-11-21 21:10:21,086 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-21 22:11:17] 2025-11-21 21:10:21,086 | INFO     | job 6891568289 has completed (purged errors)
[2025-11-21 22:11:17] 2025-11-21 21:10:21,087 | INFO     | overall cleanup function is called
[2025-11-21 22:11:17] 2025-11-21 21:10:22,105 | INFO     | --- collectZombieJob: --- 10, [19072]
[2025-11-21 22:11:17] 2025-11-21 21:10:22,105 | INFO     | zombie collector waiting for pid 19072
[2025-11-21 22:11:17] 2025-11-21 21:10:22,106 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-21 22:11:17] 2025-11-21 21:10:22,106 | INFO     | collected zombie processes
[2025-11-21 22:11:17] 2025-11-21 21:10:22,106 | INFO     | will attempt to kill all subprocesses of pid=19072
[2025-11-21 22:11:17] 2025-11-21 21:10:22,241 | INFO     | process IDs to be killed: [19072] (in reverse order)
[2025-11-21 22:11:17] 2025-11-21 21:10:22,918 | WARNING  | found no corresponding commands to process id(s)
[2025-11-21 22:11:17] 2025-11-21 21:10:22,918 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-21 22:11:17] 2025-11-21 21:10:22,922 | INFO     | did not find any defunct processes belonging to 19072
[2025-11-21 22:11:17] 2025-11-21 21:10:22,925 | INFO     | did not find any defunct processes belonging to 19072
[2025-11-21 22:11:17] 2025-11-21 21:10:22,967 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-21 22:11:17] 2025-11-21 21:10:22,968 | INFO     | ready for new job
[2025-11-21 22:11:17] 2025-11-21 21:10:22,968 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-21 22:11:17] 2025-11-21 21:10:22,974 | INFO     | ***************************************
[2025-11-21 22:11:17] 2025-11-21 21:10:22,975 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-21 22:11:17] 2025-11-21 21:10:22,975 | INFO     | ***************************************
[2025-11-21 22:11:17] 2025-11-21 21:10:22,975 | INFO     | 
[2025-11-21 22:11:17] 2025-11-21 21:10:22,976 | INFO     | pilot is running in a VM
[2025-11-21 22:11:17] 2025-11-21 21:10:22,976 | INFO     | architecture information:
[2025-11-21 22:11:17] 2025-11-21 21:10:22,976 | INFO     | executing command: cat /etc/os-release
[2025-11-21 22:11:17] 2025-11-21 21:10:23,151 | INFO     | cat /etc/os-release:
[2025-11-21 22:11:17] NAME="CentOS Linux"
[2025-11-21 22:11:17] VERSION="7 (Core)"
[2025-11-21 22:11:17] ID="centos"
[2025-11-21 22:11:17] ID_LIKE="rhel fedora"
[2025-11-21 22:11:17] VERSION_ID="7"
[2025-11-21 22:11:17] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-21 22:11:17] ANSI_COLOR="0;31"
[2025-11-21 22:11:17] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-21 22:11:17] HOME_URL="https://www.centos.org/"
[2025-11-21 22:11:17] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-21 22:11:17] 
[2025-11-21 22:11:17] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-21 22:11:17] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-21 22:11:17] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-21 22:11:17] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-21 22:11:17] 
[2025-11-21 22:11:17] 2025-11-21 21:10:23,151 | INFO     | ***************************************
[2025-11-21 22:11:17] 2025-11-21 21:10:23,656 | INFO     | executing command: df -mP /var/lib/boinc/slots/8
[2025-11-21 22:11:17] 2025-11-21 21:10:23,933 | INFO     | sufficient remaining disk space (494945697792 B)
[2025-11-21 22:11:17] 2025-11-21 21:10:23,934 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-21 22:11:17] 2025-11-21 21:10:23,934 | INFO     | current server update state: UPDATING_FINAL
[2025-11-21 22:11:17] 2025-11-21 21:10:23,934 | INFO     | update_server=False
[2025-11-21 22:11:17] 2025-11-21 21:10:23,934 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-21 22:11:17] 2025-11-21 21:10:23,936 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-21 22:11:17] 2025-11-21 21:10:23,937 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-21 22:11:17] 2025-11-21 21:10:23,937 | INFO     | aborting loop
[2025-11-21 22:11:17] 2025-11-21 21:10:24,101 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-21 22:11:17] 2025-11-21 21:10:24,104 | INFO     | all data control threads have been joined
[2025-11-21 22:11:17] 2025-11-21 21:10:24,200 | INFO     | all job control threads have been joined
[2025-11-21 22:11:17] 2025-11-21 21:10:24,709 | INFO     | all payload control threads have been joined
[2025-11-21 22:11:17] 2025-11-21 21:10:24,940 | INFO     | [job] retrieve thread has finished
[2025-11-21 22:11:17] 2025-11-21 21:10:24,942 | INFO     | [job] job monitor thread has finished
[2025-11-21 22:11:17] 2025-11-21 21:10:25,106 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-21 22:11:17] 2025-11-21 21:10:25,113 | INFO     | [data] control thread has finished
[2025-11-21 22:11:17] 2025-11-21 21:10:25,206 | INFO     | [job] control thread has finished
[2025-11-21 22:11:17] 2025-11-21 21:10:25,337 | INFO     | [data] copytool_in thread has finished
[2025-11-21 22:11:17] 2025-11-21 21:10:25,375 | INFO     | [payload] execute_payloads thread has finished
[2025-11-21 22:11:17] 2025-11-21 21:10:25,508 | INFO     | [payload] validate_post thread has finished
[2025-11-21 22:11:17] 2025-11-21 21:10:25,552 | INFO     | [payload] validate_pre thread has finished
[2025-11-21 22:11:17] 2025-11-21 21:10:25,601 | INFO     | [payload] failed_post thread has finished
[2025-11-21 22:11:17] 2025-11-21 21:10:25,715 | INFO     | [payload] control thread has finished
[2025-11-21 22:11:17] 2025-11-21 21:10:25,788 | INFO     | [job] create_data_payload thread has finished
[2025-11-21 22:11:17] 2025-11-21 21:10:25,827 | INFO     | [job] validate thread has finished
[2025-11-21 22:11:17] 2025-11-21 21:10:25,876 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-21 22:11:17] 2025-11-21 21:10:25,944 | INFO     | [data] copytool_out thread has finished
[2025-11-21 22:11:17] 2025-11-21 21:10:26,882 | INFO     | [job] queue monitor thread has finished
[2025-11-21 22:11:17] 2025-11-21 21:10:28,110 | INFO     | [data] queue_monitor thread has finished
[2025-11-21 22:11:17] 2025-11-21 21:10:52,422 | INFO     | PID=12470 has CPU usage=2.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-21 22:11:17] 2025-11-21 21:10:52,423 | INFO     | .. there are 9 such processes running
[2025-11-21 22:11:17] 2025-11-21 21:10:52,424 | INFO     | found 0 job(s) in 20 queues
[2025-11-21 22:11:17] 2025-11-21 21:10:52,424 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-21 22:11:17] 2025-11-21 21:10:52,424 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-21 22:11:17] 2025-11-21 21:11:08,622 | INFO     | [monitor] cgroup control has ended
[2025-11-21 22:11:17] 2025-11-21 21:11:08,698 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140212239202112)>', '<ExcThread(monitor, started 140211799443200)>']
[2025-11-21 22:11:17] 2025-11-21 21:11:09,525 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-21 22:11:17] 2025-11-21 21:11:09,525 | INFO     | [monitor] control thread has ended
[2025-11-21 22:11:17] 2025-11-21 21:11:13,724 | INFO     | all workflow threads have been joined
[2025-11-21 22:11:17] 2025-11-21 21:11:13,725 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-21 22:11:17] 2025-11-21 21:11:13,725 | INFO     | traces error code: 0
[2025-11-21 22:11:17] 2025-11-21 21:11:13,725 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-21 22:11:17] 2025-11-21 21:11:14,097 [wrapper] ==== pilot stdout END ====
[2025-11-21 22:11:17] 2025-11-21 21:11:14,158 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-21 22:11:17] 2025-11-21 21:11:14,210 [wrapper] pilotpid: 12470
[2025-11-21 22:11:17] 2025-11-21 21:11:14,303 [wrapper] Pilot exit status: 0
[2025-11-21 22:11:17] 2025-11-21 21:11:14,766 [wrapper] pandaids: 6891568289
[2025-11-21 22:11:17] 2025-11-21 21:11:15,632 [wrapper] cleanup supervisor_pilot  9757 12471
[2025-11-21 22:11:17] 2025-11-21 21:11:15,747 [wrapper] Test setup, not cleaning
[2025-11-21 22:11:17] 2025-11-21 21:11:15,826 [wrapper] apfmon messages muted
[2025-11-21 22:11:17] 2025-11-21 21:11:15,914 [wrapper] ==== wrapper stdout END ====
[2025-11-21 22:11:17] 2025-11-21 21:11:15,973 [wrapper] ==== wrapper stderr END ====
[2025-11-21 22:11:17]  *** Error codes and diagnostics ***
[2025-11-21 22:11:17]     "exeErrorCode": 0,
[2025-11-21 22:11:17]     "exeErrorDiag": "",
[2025-11-21 22:11:17]     "pilotErrorCode": 0,
[2025-11-21 22:11:17]     "pilotErrorDiag": "",
[2025-11-21 22:11:17]  *** Listing of results directory ***
[2025-11-21 22:11:17] total 1331400
[2025-11-21 22:11:17] -rw-r--r--. 1 boinc boinc    576529 Nov 18 16:15 pilot3.tar.gz
[2025-11-21 22:11:17] -rw-r--r--. 1 boinc boinc      5112 Nov 18 16:32 queuedata.json
[2025-11-21 22:11:17] -rwx------. 1 boinc boinc     36292 Nov 18 16:34 runpilot2-wrapper.sh
[2025-11-21 22:11:17] -rw-r--r--. 1 boinc boinc       100 Nov 20 20:41 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-21 22:11:17] -rwxr-xr-x. 1 boinc boinc      7986 Nov 20 20:41 run_atlas
[2025-11-21 22:11:17] -rw-r--r--. 1 boinc boinc       105 Nov 20 20:41 job.xml
[2025-11-21 22:11:17] -rw-r--r--. 2 boinc boinc 407254762 Nov 20 20:41 EVNT.47493065._000183.pool.root.1
[2025-11-21 22:11:17] -rw-r--r--. 1 boinc boinc      6391 Nov 20 20:41 init_data.xml
[2025-11-21 22:11:17] -rw-r--r--. 2 boinc boinc     15120 Nov 20 20:41 start_atlas.sh
[2025-11-21 22:11:17] drwxrwx--x. 2 boinc boinc        68 Nov 20 20:41 shared
[2025-11-21 22:11:17] -rw-r--r--. 2 boinc boinc    590101 Nov 20 20:41 input.tar.gz
[2025-11-21 22:11:17] -rw-r--r--. 1 boinc boinc         0 Nov 20 20:41 boinc_lockfile
[2025-11-21 22:11:17] -rw-r--r--. 1 boinc boinc      2773 Nov 20 20:41 pandaJob.out
[2025-11-21 22:11:17] -rw-------. 1 boinc boinc    989440 Nov 20 20:45 agis_schedconf.cvmfs.json
[2025-11-21 22:11:17] drwx------. 5 boinc boinc      4096 Nov 20 20:45 pilot3
[2025-11-21 22:11:17] -rw-r--r--. 1 boinc boinc       533 Nov 21 21:45 boinc_task_state.xml
[2025-11-21 22:11:17] -rw-------. 1 boinc boinc 922682589 Nov 21 22:07 HITS.47493068._001826.pool.root.1
[2025-11-21 22:11:17] -rw-------. 1 boinc boinc      1031 Nov 21 22:08 memory_monitor_summary.json
[2025-11-21 22:11:17] -rw-------. 1 boinc boinc   1526164 Nov 21 22:08 agis_ddmendpoints.agis.ALL.json
[2025-11-21 22:11:17] -rw-------. 1 boinc boinc   2567570 Nov 21 22:08 log.47493068._001826.job.log.tgz.1
[2025-11-21 22:11:17] -rw-------. 1 boinc boinc      7942 Nov 21 22:10 heartbeat.json
[2025-11-21 22:11:17] -rw-------. 1 boinc boinc        95 Nov 21 22:10 pilot_heartbeat.json
[2025-11-21 22:11:17] -rw-r--r--. 1 boinc boinc      8192 Nov 21 22:11 boinc_mmap_file
[2025-11-21 22:11:17] -rw-r--r--. 1 boinc boinc        29 Nov 21 22:11 wrapper_checkpoint.txt
[2025-11-21 22:11:17] -rw-------. 1 boinc boinc      4884 Nov 21 22:11 pilotlog.txt
[2025-11-21 22:11:17] -rw-------. 1 boinc boinc  12187413 Nov 21 22:11 log.47493068._001826.job.log.1
[2025-11-21 22:11:17] -rw-------. 1 boinc boinc       353 Nov 21 22:11 output.list
[2025-11-21 22:11:17] -rw-r--r--. 1 boinc boinc       620 Nov 21 22:11 runtime_log
[2025-11-21 22:11:17] -rw-------. 1 boinc boinc  14776320 Nov 21 22:11 result.tar.gz
[2025-11-21 22:11:17] -rw-------. 1 boinc boinc       662 Nov 21 22:11 kw0NDmgtcf8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmwWFKDm7SGiJn.diag
[2025-11-21 22:11:17] -rw-r--r--. 1 boinc boinc      8703 Nov 21 22:11 runtime_log.err
[2025-11-21 22:11:17] -rw-r--r--. 1 boinc boinc     21523 Nov 21 22:11 stderr.txt
[2025-11-21 22:11:18] HITS file was successfully produced:
[2025-11-21 22:11:18] -rw-------. 1 boinc boinc 922682589 Nov 21 22:07 shared/HITS.pool.root.1
[2025-11-21 22:11:18]  *** Contents of shared directory: ***
[2025-11-21 22:11:18] total 1313800
[2025-11-21 22:11:18] -rw-r--r--. 2 boinc boinc 407254762 Nov 20 20:41 ATLAS.root_0
[2025-11-21 22:11:18] -rw-r--r--. 2 boinc boinc     15120 Nov 20 20:41 start_atlas.sh
[2025-11-21 22:11:18] -rw-r--r--. 2 boinc boinc    590101 Nov 20 20:41 input.tar.gz
[2025-11-21 22:11:18] -rw-------. 1 boinc boinc 922682589 Nov 21 22:07 HITS.pool.root.1
[2025-11-21 22:11:18] -rw-------. 1 boinc boinc  14776320 Nov 21 22:11 result.tar.gz
22:11:19 (8704): run_atlas exited; CPU time 336900.464112
22:11:19 (8704): called boinc_finish(0)

</stderr_txt>
]]>

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