Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
19:56:51 (5147): wrapper (7.7.26015): starting
19:56:51 (5147): wrapper: running run_atlas (--nthreads 8)
[2025-11-20 19:56:51] Arguments: --nthreads 8
[2025-11-20 19:56:51] Threads: 8
[2025-11-20 19:56:51] Checking for CVMFS
[2025-11-20 19:56:52] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-20 19:56:52] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-20 19:56:52] Running cvmfs_config stat atlas.cern.ch
[2025-11-20 19:56:53] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-20 19:56:53] 2.11.2.0 20854 163924 139952 153088 1 300 16946473 25165825 4337 130560 2 55244151 99.882 27238981 2573 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-11-20 19:56:53] CVMFS is ok
[2025-11-20 19:56:53] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-20 19:56:53] Checking for apptainer binary...
[2025-11-20 19:56:53] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-20 19:56:53] Running /usr/bin/apptainer --version
[2025-11-20 19:56:54] apptainer version 1.3.2-1.el7
[2025-11-20 19:56:54] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-20 19:56:56] cg-vwn379.simple-grid.lan
[2025-11-20 19:56:56] apptainer works
[2025-11-20 19:56:56] Set ATHENA_PROC_NUMBER=8
[2025-11-20 19:56:56] Set ATHENA_CORE_NUMBER=8
[2025-11-20 19:56:56] Starting ATLAS job with PandaID=6891565264
[2025-11-20 19:56:56] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-21 22:00:29]  *** The last 200 lines of the pilot log: ***
[2025-11-21 22:00:29] 2025-11-21 20:59:24,147 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-21 22:00:29] 2025-11-21 20:59:24,415 | INFO     | time since job start (93710s) is within the limit (172800.0s)
[2025-11-21 22:00:29] 2025-11-21 20:59:26,423 | INFO     | time since job start (93712s) is within the limit (172800.0s)
[2025-11-21 22:00:29] 2025-11-21 20:59:26,651 | INFO     | monitor loop #6250: job 0:6891565264 is in state 'finished'
[2025-11-21 22:00:29] 2025-11-21 20:59:26,652 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-21 22:00:29] 2025-11-21 20:59:28,432 | INFO     | time since job start (93714s) is within the limit (172800.0s)
[2025-11-21 22:00:29] 2025-11-21 20:59:29,164 | INFO     | monitor loop #6251: job 0:6891565264 is in state 'finished'
[2025-11-21 22:00:29] 2025-11-21 20:59:29,165 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-21 22:00:29] 2025-11-21 20:59:30,439 | INFO     | time since job start (93716s) is within the limit (172800.0s)
[2025-11-21 22:00:29] 2025-11-21 20:59:31,674 | INFO     | monitor loop #6252: job 0:6891565264 is in state 'finished'
[2025-11-21 22:00:29] 2025-11-21 20:59:31,675 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-21 22:00:29] 2025-11-21 20:59:32,446 | INFO     | time since job start (93718s) is within the limit (172800.0s)
[2025-11-21 22:00:29] 2025-11-21 20:59:34,184 | INFO     | monitor loop #6253: job 0:6891565264 is in state 'finished'
[2025-11-21 22:00:29] 2025-11-21 20:59:34,185 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-21 22:00:29] 2025-11-21 20:59:34,452 | INFO     | time since job start (93720s) is within the limit (172800.0s)
[2025-11-21 22:00:29] 2025-11-21 20:59:35,395 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-21 22:00:29] 2025-11-21 20:59:35,396 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2025-11-21 22:00:29] 2025-11-21 20:59:35,398 | INFO     | using path: /var/lib/boinc/slots/3/PanDA_Pilot-6891565264/memory_monitor_summary.json (trf name=prmon)
[2025-11-21 22:00:29] 2025-11-21 20:59:35,398 | INFO     | extracted standard info from prmon json
[2025-11-21 22:00:29] 2025-11-21 20:59:35,399 | INFO     | extracted standard memory fields from prmon json
[2025-11-21 22:00:29] 2025-11-21 20:59:35,399 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-21 22:00:29] 2025-11-21 20:59:35,442 | INFO     | fitting pss+swap vs Time
[2025-11-21 22:00:29] 2025-11-21 20:59:35,445 | INFO     | sum of square deviations: 1119314208619.4297
[2025-11-21 22:00:29] 2025-11-21 20:59:35,523 | INFO     | sum of deviations: 1167430509414.3179
[2025-11-21 22:00:29] 2025-11-21 20:59:35,523 | INFO     | mean x: 1763711864.6877444
[2025-11-21 22:00:29] 2025-11-21 20:59:35,523 | INFO     | mean y: 2882085.990221643
[2025-11-21 22:00:29] 2025-11-21 20:59:35,523 | INFO     | intersect: -1836646997.7976892
[2025-11-21 22:00:29] 2025-11-21 20:59:35,525 | INFO     | chi2: 18.37828491832965
[2025-11-21 22:00:29] 2025-11-21 20:59:35,528 | INFO     | sum of square deviations: 1108405285354.8518
[2025-11-21 22:00:29] 2025-11-21 20:59:35,612 | INFO     | sum of deviations: 1673992063392.9092
[2025-11-21 22:00:29] 2025-11-21 20:59:35,613 | INFO     | mean x: 1763711712.1916285
[2025-11-21 22:00:29] 2025-11-21 20:59:35,613 | INFO     | mean y: 2889166.3211249183
[2025-11-21 22:00:29] 2025-11-21 20:59:35,613 | INFO     | intersect: -2660793015.036114
[2025-11-21 22:00:29] 2025-11-21 20:59:35,615 | INFO     | chi2: 15.230106540987185
[2025-11-21 22:00:29] 2025-11-21 20:59:35,615 | INFO     | current chi2=15.230106540987185 (change=17.129881223043935 %)
[2025-11-21 22:00:29] 2025-11-21 20:59:35,615 | INFO     | right removable region: 1528
[2025-11-21 22:00:29] 2025-11-21 20:59:35,618 | INFO     | sum of square deviations: 1108404173934.8533
[2025-11-21 22:00:29] 2025-11-21 20:59:35,686 | INFO     | sum of deviations: 704199482194.2981
[2025-11-21 22:00:29] 2025-11-21 20:59:35,687 | INFO     | mean x: 1763712017.1916285
[2025-11-21 22:00:29] 2025-11-21 20:59:35,687 | INFO     | mean y: 2888558.3982995423
[2025-11-21 22:00:29] 2025-11-21 20:59:35,687 | INFO     | intersect: -1117645916.7084363
[2025-11-21 22:00:29] 2025-11-21 20:59:35,689 | INFO     | chi2: 15.997171105354687
[2025-11-21 22:00:29] 2025-11-21 20:59:35,689 | INFO     | current chi2=15.997171105354687 (change=12.956126339080487 %)
[2025-11-21 22:00:29] 2025-11-21 20:59:35,690 | INFO     | left removable region: 10
[2025-11-21 22:00:29] 2025-11-21 20:59:35,692 | INFO     | sum of square deviations: 1084653902522.6067
[2025-11-21 22:00:29] 2025-11-21 20:59:35,761 | INFO     | sum of deviations: 1206742414022.7627
[2025-11-21 22:00:29] 2025-11-21 20:59:35,761 | INFO     | mean x: 1763711986.6969697
[2025-11-21 22:00:29] 2025-11-21 20:59:35,761 | INFO     | mean y: 2898849.360342556
[2025-11-21 22:00:29] 2025-11-21 20:59:35,762 | INFO     | intersect: -1959336344.296949
[2025-11-21 22:00:29] 2025-11-21 20:59:35,763 | INFO     | chi2: 12.014368415587239
[2025-11-21 22:00:29] 2025-11-21 20:59:35,764 | INFO     | current memory leak: 1.11 B/s (using 1518 data points, chi2=12.01)
[2025-11-21 22:00:29] 2025-11-21 20:59:35,766 | INFO     | could have reported an average CPU frequency of 1999 MHz (52 samples)
[2025-11-21 22:00:29] 2025-11-21 20:59:35,766 | INFO     | ..............................
[2025-11-21 22:00:29] 2025-11-21 20:59:35,767 | INFO     | . Timing measurements:
[2025-11-21 22:00:29] 2025-11-21 20:59:35,767 | INFO     | . get job = 0 s
[2025-11-21 22:00:29] 2025-11-21 20:59:35,767 | INFO     | . initial setup = 2 s
[2025-11-21 22:00:29] 2025-11-21 20:59:35,767 | INFO     | . payload setup = 11 s
[2025-11-21 22:00:29] 2025-11-21 20:59:35,767 | INFO     | . stage-in = 0 s
[2025-11-21 22:00:29] 2025-11-21 20:59:35,767 | INFO     | . payload execution = 93586 s
[2025-11-21 22:00:29] 2025-11-21 20:59:35,767 | INFO     | . stage-out = 5 s
[2025-11-21 22:00:29] 2025-11-21 20:59:35,767 | INFO     | . log creation = 2 s
[2025-11-21 22:00:29] 2025-11-21 20:59:35,767 | INFO     | ..............................
[2025-11-21 22:00:29] 2025-11-21 20:59:35,928 | INFO     | 
[2025-11-21 22:00:29] 2025-11-21 20:59:35,929 | INFO     | job summary report
[2025-11-21 22:00:29] 2025-11-21 20:59:35,929 | INFO     | --------------------------------------------------
[2025-11-21 22:00:29] 2025-11-21 20:59:35,929 | INFO     | PanDA job id: 6891565264
[2025-11-21 22:00:29] 2025-11-21 20:59:35,929 | INFO     | task id: 47493068
[2025-11-21 22:00:29] 2025-11-21 20:59:35,929 | INFO     | errors: (none)
[2025-11-21 22:00:29] 2025-11-21 20:59:35,929 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-21 22:00:29] 2025-11-21 20:59:35,929 | INFO     | pilot state: finished 
[2025-11-21 22:00:29] 2025-11-21 20:59:35,929 | INFO     | transexitcode: 0
[2025-11-21 22:00:29] 2025-11-21 20:59:35,929 | INFO     | exeerrorcode: 0
[2025-11-21 22:00:29] 2025-11-21 20:59:35,929 | INFO     | exeerrordiag: 
[2025-11-21 22:00:29] 2025-11-21 20:59:35,930 | INFO     | exitcode: 0
[2025-11-21 22:00:29] 2025-11-21 20:59:35,930 | INFO     | exitmsg: OK
[2025-11-21 22:00:29] 2025-11-21 20:59:35,930 | INFO     | cpuconsumptiontime: 345797 s
[2025-11-21 22:00:29] 2025-11-21 20:59:35,930 | INFO     | nevents: 1000
[2025-11-21 22:00:29] 2025-11-21 20:59:35,930 | INFO     | neventsw: 0
[2025-11-21 22:00:29] 2025-11-21 20:59:35,930 | INFO     | pid: 15362
[2025-11-21 22:00:29] 2025-11-21 20:59:35,930 | INFO     | pgrp: 15362
[2025-11-21 22:00:29] 2025-11-21 20:59:35,930 | INFO     | corecount: 8
[2025-11-21 22:00:29] 2025-11-21 20:59:35,930 | INFO     | event service: False
[2025-11-21 22:00:29] 2025-11-21 20:59:35,931 | INFO     | sizes: {0: 2298569, 1: 2298824, 2: 2298824, 8: 2299114, 12: 2299142, 93602: 2362953, 93608: 2372003, 93701: 2371971}
[2025-11-21 22:00:29] 2025-11-21 20:59:35,931 | INFO     | --------------------------------------------------
[2025-11-21 22:00:29] 2025-11-21 20:59:35,931 | INFO     | 
[2025-11-21 22:00:29] 2025-11-21 20:59:35,931 | INFO     | executing command: ls -lF /var/lib/boinc/slots/3
[2025-11-21 22:00:29] 2025-11-21 20:59:36,471 | INFO     | time since job start (93722s) is within the limit (172800.0s)
[2025-11-21 22:00:29] 2025-11-21 20:59:36,489 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-21 22:00:29] 2025-11-21 20:59:36,489 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-21 22:00:29] 2025-11-21 20:59:36,489 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-21 22:00:29] 2025-11-21 20:59:36,489 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-21 22:00:29] 2025-11-21 20:59:36,489 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-21 22:00:29] 2025-11-21 20:59:36,489 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-21 22:00:29] 2025-11-21 20:59:36,490 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-21 22:00:29] 2025-11-21 20:59:36,490 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-21 22:00:29] 2025-11-21 20:59:36,490 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-21 22:00:29] 2025-11-21 20:59:36,490 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-21 22:00:29] 2025-11-21 20:59:36,490 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-21 22:00:29] 2025-11-21 20:59:36,490 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-21 22:00:29] 2025-11-21 20:59:36,490 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-21 22:00:29] 2025-11-21 20:59:36,490 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-21 22:00:29] 2025-11-21 20:59:36,490 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-21 22:00:29] 2025-11-21 20:59:36,490 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-21 22:00:29] 2025-11-21 20:59:36,490 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-21 22:00:29] 2025-11-21 20:59:36,491 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-21 22:00:29] 2025-11-21 20:59:36,491 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-21 22:00:29] 2025-11-21 20:59:36,491 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-21 22:00:29] 2025-11-21 20:59:36,491 | INFO     | job 6891565264 has completed (purged errors)
[2025-11-21 22:00:29] 2025-11-21 20:59:36,491 | INFO     | overall cleanup function is called
[2025-11-21 22:00:29] 2025-11-21 20:59:37,516 | INFO     | --- collectZombieJob: --- 10, [15362]
[2025-11-21 22:00:29] 2025-11-21 20:59:37,517 | INFO     | zombie collector waiting for pid 15362
[2025-11-21 22:00:29] 2025-11-21 20:59:37,517 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-21 22:00:29] 2025-11-21 20:59:37,517 | INFO     | collected zombie processes
[2025-11-21 22:00:29] 2025-11-21 20:59:37,517 | INFO     | will attempt to kill all subprocesses of pid=15362
[2025-11-21 22:00:29] 2025-11-21 20:59:37,625 | INFO     | process IDs to be killed: [15362] (in reverse order)
[2025-11-21 22:00:29] 2025-11-21 20:59:38,529 | WARNING  | found no corresponding commands to process id(s)
[2025-11-21 22:00:29] 2025-11-21 20:59:38,530 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-21 22:00:29] 2025-11-21 20:59:38,533 | INFO     | did not find any defunct processes belonging to 15362
[2025-11-21 22:00:29] 2025-11-21 20:59:38,536 | INFO     | did not find any defunct processes belonging to 15362
[2025-11-21 22:00:29] 2025-11-21 20:59:38,584 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-21 22:00:29] 2025-11-21 20:59:38,584 | INFO     | ready for new job
[2025-11-21 22:00:29] 2025-11-21 20:59:38,584 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-21 22:00:29] 2025-11-21 20:59:38,591 | INFO     | ***************************************
[2025-11-21 22:00:29] 2025-11-21 20:59:38,591 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-21 22:00:29] 2025-11-21 20:59:38,591 | INFO     | ***************************************
[2025-11-21 22:00:29] 2025-11-21 20:59:38,592 | INFO     | 
[2025-11-21 22:00:29] 2025-11-21 20:59:38,592 | INFO     | pilot is running in a VM
[2025-11-21 22:00:29] 2025-11-21 20:59:38,592 | INFO     | architecture information:
[2025-11-21 22:00:29] 2025-11-21 20:59:38,598 | INFO     | executing command: cat /etc/os-release
[2025-11-21 22:00:29] 2025-11-21 20:59:38,802 | INFO     | cat /etc/os-release:
[2025-11-21 22:00:29] NAME="CentOS Linux"
[2025-11-21 22:00:29] VERSION="7 (Core)"
[2025-11-21 22:00:29] ID="centos"
[2025-11-21 22:00:29] ID_LIKE="rhel fedora"
[2025-11-21 22:00:29] VERSION_ID="7"
[2025-11-21 22:00:29] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-21 22:00:29] ANSI_COLOR="0;31"
[2025-11-21 22:00:29] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-21 22:00:29] HOME_URL="https://www.centos.org/"
[2025-11-21 22:00:29] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-21 22:00:29] 
[2025-11-21 22:00:29] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-21 22:00:29] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-21 22:00:29] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-21 22:00:29] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-21 22:00:29] 
[2025-11-21 22:00:29] 2025-11-21 20:59:38,802 | INFO     | ***************************************
[2025-11-21 22:00:29] 2025-11-21 20:59:39,306 | INFO     | executing command: df -mP /var/lib/boinc/slots/3
[2025-11-21 22:00:29] 2025-11-21 20:59:39,559 | INFO     | sufficient remaining disk space (494795751424 B)
[2025-11-21 22:00:29] 2025-11-21 20:59:39,559 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-21 22:00:29] 2025-11-21 20:59:39,560 | INFO     | current server update state: UPDATING_FINAL
[2025-11-21 22:00:29] 2025-11-21 20:59:39,560 | INFO     | update_server=False
[2025-11-21 22:00:29] 2025-11-21 20:59:39,560 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-21 22:00:29] 2025-11-21 20:59:39,560 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-21 22:00:29] 2025-11-21 20:59:39,568 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-21 22:00:29] 2025-11-21 20:59:39,783 | INFO     | all job control threads have been joined
[2025-11-21 22:00:29] 2025-11-21 20:59:39,879 | INFO     | all payload control threads have been joined
[2025-11-21 22:00:29] 2025-11-21 20:59:39,967 | INFO     | all data control threads have been joined
[2025-11-21 22:00:29] 2025-11-21 20:59:40,205 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-21 22:00:29] 2025-11-21 20:59:40,206 | INFO     | aborting loop
[2025-11-21 22:00:29] 2025-11-21 20:59:40,565 | INFO     | [job] retrieve thread has finished
[2025-11-21 22:00:29] 2025-11-21 20:59:40,789 | INFO     | [job] control thread has finished
[2025-11-21 22:00:29] 2025-11-21 20:59:40,804 | INFO     | [job] validate thread has finished
[2025-11-21 22:00:29] 2025-11-21 20:59:40,885 | INFO     | [payload] control thread has finished
[2025-11-21 22:00:29] 2025-11-21 20:59:40,941 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-21 22:00:29] 2025-11-21 20:59:40,960 | INFO     | [payload] validate_post thread has finished
[2025-11-21 22:00:29] 2025-11-21 20:59:40,973 | INFO     | [data] control thread has finished
[2025-11-21 22:00:29] 2025-11-21 20:59:41,176 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-21 22:00:29] 2025-11-21 20:59:41,211 | INFO     | [job] job monitor thread has finished
[2025-11-21 22:00:29] 2025-11-21 20:59:41,494 | INFO     | [payload] execute_payloads thread has finished
[2025-11-21 22:00:29] 2025-11-21 20:59:41,567 | INFO     | [data] copytool_out thread has finished
[2025-11-21 22:00:29] 2025-11-21 20:59:41,603 | INFO     | [data] copytool_in thread has finished
[2025-11-21 22:00:29] 2025-11-21 20:59:41,719 | INFO     | [payload] failed_post thread has finished
[2025-11-21 22:00:29] 2025-11-21 20:59:41,874 | INFO     | [job] create_data_payload thread has finished
[2025-11-21 22:00:29] 2025-11-21 20:59:41,947 | INFO     | [job] queue monitor thread has finished
[2025-11-21 22:00:29] 2025-11-21 20:59:42,063 | INFO     | [payload] validate_pre thread has finished
[2025-11-21 22:00:29] 2025-11-21 20:59:43,577 | INFO     | [data] queue_monitor thread has finished
[2025-11-21 22:00:29] 2025-11-21 21:00:09,613 | INFO     | PID=8897 has CPU usage=1.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-11-21 22:00:29] 2025-11-21 21:00:09,613 | INFO     | .. there are 9 such processes running
[2025-11-21 22:00:29] 2025-11-21 21:00:09,613 | INFO     | found 0 job(s) in 20 queues
[2025-11-21 22:00:29] 2025-11-21 21:00:09,614 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-21 22:00:29] 2025-11-21 21:00:09,614 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-21 22:00:29] 2025-11-21 21:00:18,322 | INFO     | [monitor] cgroup control has ended
[2025-11-21 22:00:29] 2025-11-21 21:00:19,720 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140465082758976)>', '<ExcThread(monitor, started 140464330098432)>']
[2025-11-21 22:00:29] 2025-11-21 21:00:20,680 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-21 22:00:29] 2025-11-21 21:00:20,681 | INFO     | [monitor] control thread has ended
[2025-11-21 22:00:29] 2025-11-21 21:00:24,746 | INFO     | all workflow threads have been joined
[2025-11-21 22:00:29] 2025-11-21 21:00:24,747 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-21 22:00:29] 2025-11-21 21:00:24,747 | INFO     | traces error code: 0
[2025-11-21 22:00:29] 2025-11-21 21:00:24,747 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-21 22:00:29] 2025-11-21 21:00:25,173 [wrapper] ==== pilot stdout END ====
[2025-11-21 22:00:29] 2025-11-21 21:00:25,225 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-21 22:00:29] 2025-11-21 21:00:25,284 [wrapper] pilotpid: 8897
[2025-11-21 22:00:29] 2025-11-21 21:00:25,400 [wrapper] Pilot exit status: 0
[2025-11-21 22:00:29] 2025-11-21 21:00:25,769 [wrapper] pandaids: 6891565264
[2025-11-21 22:00:29] 2025-11-21 21:00:26,730 [wrapper] cleanup supervisor_pilot 22490 8898
[2025-11-21 22:00:29] 2025-11-21 21:00:26,806 [wrapper] Test setup, not cleaning
[2025-11-21 22:00:29] 2025-11-21 21:00:26,919 [wrapper] apfmon messages muted
[2025-11-21 22:00:29] 2025-11-21 21:00:27,031 [wrapper] ==== wrapper stdout END ====
[2025-11-21 22:00:29] 2025-11-21 21:00:27,093 [wrapper] ==== wrapper stderr END ====
[2025-11-21 22:00:29]  *** Error codes and diagnostics ***
[2025-11-21 22:00:29]     "exeErrorCode": 0,
[2025-11-21 22:00:29]     "exeErrorDiag": "",
[2025-11-21 22:00:29]     "pilotErrorCode": 0,
[2025-11-21 22:00:29]     "pilotErrorDiag": "",
[2025-11-21 22:00:29]  *** Listing of results directory ***
[2025-11-21 22:00:29] total 1342688
[2025-11-21 22:00:29] -rw-r--r--. 1 boinc boinc    576529 Nov 18 16:15 pilot3.tar.gz
[2025-11-21 22:00:29] -rw-r--r--. 1 boinc boinc      5112 Nov 18 16:29 queuedata.json
[2025-11-21 22:00:29] -rwx------. 1 boinc boinc     36292 Nov 18 16:30 runpilot2-wrapper.sh
[2025-11-21 22:00:29] -rw-r--r--. 1 boinc boinc       100 Nov 20 19:56 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-21 22:00:29] -rwxr-xr-x. 1 boinc boinc      7986 Nov 20 19:56 run_atlas
[2025-11-21 22:00:29] -rw-r--r--. 1 boinc boinc       105 Nov 20 19:56 job.xml
[2025-11-21 22:00:29] -rw-r--r--. 2 boinc boinc 410687051 Nov 20 19:56 EVNT.47493065._000141.pool.root.1
[2025-11-21 22:00:29] -rw-r--r--. 1 boinc boinc      6390 Nov 20 19:56 init_data.xml
[2025-11-21 22:00:29] -rw-r--r--. 2 boinc boinc     15120 Nov 20 19:56 start_atlas.sh
[2025-11-21 22:00:29] drwxrwx--x. 2 boinc boinc        68 Nov 20 19:56 shared
[2025-11-21 22:00:29] -rw-r--r--. 2 boinc boinc    590101 Nov 20 19:56 input.tar.gz
[2025-11-21 22:00:29] -rw-r--r--. 1 boinc boinc         0 Nov 20 19:56 boinc_lockfile
[2025-11-21 22:00:29] -rw-r--r--. 1 boinc boinc      2773 Nov 20 19:56 pandaJob.out
[2025-11-21 22:00:29] -rw-------. 1 boinc boinc    989440 Nov 20 19:57 agis_schedconf.cvmfs.json
[2025-11-21 22:00:29] drwx------. 5 boinc boinc      4096 Nov 20 19:57 pilot3
[2025-11-21 22:00:29] -rw-r--r--. 1 boinc boinc       533 Nov 21 21:31 boinc_task_state.xml
[2025-11-21 22:00:29] -rw-------. 1 boinc boinc 930211120 Nov 21 21:56 HITS.47493068._001410.pool.root.1
[2025-11-21 22:00:29] -rw-------. 1 boinc boinc      1033 Nov 21 21:57 memory_monitor_summary.json
[2025-11-21 22:00:29] -rw-------. 1 boinc boinc   1526164 Nov 21 21:57 agis_ddmendpoints.agis.ALL.json
[2025-11-21 22:00:29] -rw-------. 1 boinc boinc   2582336 Nov 21 21:58 log.47493068._001410.job.log.tgz.1
[2025-11-21 22:00:29] -rw-------. 1 boinc boinc        95 Nov 21 21:59 pilot_heartbeat.json
[2025-11-21 22:00:29] -rw-------. 1 boinc boinc      7946 Nov 21 21:59 heartbeat.json
[2025-11-21 22:00:29] -rw-r--r--. 1 boinc boinc      8192 Nov 21 21:59 boinc_mmap_file
[2025-11-21 22:00:29] -rw-r--r--. 1 boinc boinc        29 Nov 21 21:59 wrapper_checkpoint.txt
[2025-11-21 22:00:29] -rw-------. 1 boinc boinc      4883 Nov 21 22:00 pilotlog.txt
[2025-11-21 22:00:29] -rw-------. 1 boinc boinc  12475526 Nov 21 22:00 log.47493068._001410.job.log.1
[2025-11-21 22:00:29] -rw-------. 1 boinc boinc       353 Nov 21 22:00 output.list
[2025-11-21 22:00:29] -rw-r--r--. 1 boinc boinc       620 Nov 21 22:00 runtime_log
[2025-11-21 22:00:29] -rw-------. 1 boinc boinc  15073280 Nov 21 22:00 result.tar.gz
[2025-11-21 22:00:29] -rw-------. 1 boinc boinc       662 Nov 21 22:00 YwhNDmdqcf8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmqTFKDmwXtFAn.diag
[2025-11-21 22:00:29] -rw-r--r--. 1 boinc boinc      8703 Nov 21 22:00 runtime_log.err
[2025-11-21 22:00:29] -rw-r--r--. 1 boinc boinc     21401 Nov 21 22:00 stderr.txt
[2025-11-21 22:00:29] HITS file was successfully produced:
[2025-11-21 22:00:29] -rw-------. 1 boinc boinc 930211120 Nov 21 21:56 shared/HITS.pool.root.1
[2025-11-21 22:00:29]  *** Contents of shared directory: ***
[2025-11-21 22:00:29] total 1324792
[2025-11-21 22:00:29] -rw-r--r--. 2 boinc boinc 410687051 Nov 20 19:56 ATLAS.root_0
[2025-11-21 22:00:29] -rw-r--r--. 2 boinc boinc     15120 Nov 20 19:56 start_atlas.sh
[2025-11-21 22:00:29] -rw-r--r--. 2 boinc boinc    590101 Nov 20 19:56 input.tar.gz
[2025-11-21 22:00:29] -rw-------. 1 boinc boinc 930211120 Nov 21 21:56 HITS.pool.root.1
[2025-11-21 22:00:29] -rw-------. 1 boinc boinc  15073280 Nov 21 22:00 result.tar.gz
22:00:31 (5147): run_atlas exited; CPU time 346455.947648
22:00:31 (5147): called boinc_finish(0)

</stderr_txt>
]]>

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