Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
18:41:50 (31326): wrapper (7.7.26015): starting
18:41:50 (31326): wrapper: running run_atlas (--nthreads 8)
[2025-11-19 18:41:50] Arguments: --nthreads 8
[2025-11-19 18:41:50] Threads: 8
[2025-11-19 18:41:50] Checking for CVMFS
[2025-11-19 18:41:51] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-19 18:41:51] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-19 18:41:51] Running cvmfs_config stat atlas.cern.ch
[2025-11-19 18:41:52] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-19 18:41:52] 2.11.2.0 26010 275476 141596 153052 2 243 18241913 25165824 3451 130560 3 135912089 99.885 73562701 2933 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-11-19 18:41:52] CVMFS is ok
[2025-11-19 18:41:52] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-19 18:41:52] Checking for apptainer binary...
[2025-11-19 18:41:52] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-19 18:41:52] Running /usr/bin/apptainer --version
[2025-11-19 18:41:52] apptainer version 1.3.2-1.el7
[2025-11-19 18:41:52] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-19 18:41:55] cg-vwn216.simple-grid.lan
[2025-11-19 18:41:55] apptainer works
[2025-11-19 18:41:56] Set ATHENA_PROC_NUMBER=8
[2025-11-19 18:41:56] Set ATHENA_CORE_NUMBER=8
[2025-11-19 18:41:56] Starting ATLAS job with PandaID=6891564457
[2025-11-19 18:41:56] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/13 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-20 19:44:38]  *** The last 200 lines of the pilot log: ***
[2025-11-20 19:44:38] 2025-11-20 18:44:05,362 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-20 19:44:38] 2025-11-20 18:44:05,391 | INFO     | fitting pss+swap vs Time
[2025-11-20 19:44:38] 2025-11-20 18:44:05,393 | INFO     | sum of square deviations: 991027693164.7443
[2025-11-20 19:44:38] 2025-11-20 18:44:05,459 | INFO     | sum of deviations: 3587263334552.8975
[2025-11-20 19:44:38] 2025-11-20 18:44:05,460 | INFO     | mean x: 1763619328.3849287
[2025-11-20 19:44:38] 2025-11-20 18:44:05,460 | INFO     | mean y: 2884402.7338764425
[2025-11-20 19:44:38] 2025-11-20 18:44:05,460 | INFO     | intersect: -6380960364.127103
[2025-11-20 19:44:38] 2025-11-20 18:44:05,462 | INFO     | chi2: 7.224355728761301
[2025-11-20 19:44:38] 2025-11-20 18:44:05,464 | INFO     | sum of square deviations: 980970582590.1227
[2025-11-20 19:44:38] 2025-11-20 18:44:05,529 | INFO     | sum of deviations: 4089079802385.3467
[2025-11-20 19:44:38] 2025-11-20 18:44:05,530 | INFO     | mean x: 1763619175.8896458
[2025-11-20 19:44:38] 2025-11-20 18:44:05,530 | INFO     | mean y: 2892011.372615804
[2025-11-20 19:44:38] 2025-11-20 18:44:05,530 | INFO     | intersect: -7348581803.661289
[2025-11-20 19:44:38] 2025-11-20 18:44:05,532 | INFO     | chi2: 4.034738501657413
[2025-11-20 19:44:38] 2025-11-20 18:44:05,532 | INFO     | current chi2=4.034738501657413 (change=44.15088828482681 %)
[2025-11-20 19:44:38] 2025-11-20 18:44:05,534 | INFO     | sum of square deviations: 970981663063.2224
[2025-11-20 19:44:38] 2025-11-20 18:44:05,596 | INFO     | sum of deviations: 4335498977048.5435
[2025-11-20 19:44:38] 2025-11-20 18:44:05,597 | INFO     | mean x: 1763619023.3937116
[2025-11-20 19:44:38] 2025-11-20 18:44:05,597 | INFO     | mean y: 2895769.058099795
[2025-11-20 19:44:38] 2025-11-20 18:44:05,597 | INFO     | intersect: -7871782778.119502
[2025-11-20 19:44:38] 2025-11-20 18:44:05,599 | INFO     | chi2: 2.8872268784132453
[2025-11-20 19:44:38] 2025-11-20 18:44:05,599 | INFO     | current chi2=2.8872268784132453 (change=28.440792947864814 %)
[2025-11-20 19:44:38] 2025-11-20 18:44:05,601 | INFO     | sum of square deviations: 961060434234.9446
[2025-11-20 19:44:38] 2025-11-20 18:44:05,662 | INFO     | sum of deviations: 4352394519274.486
[2025-11-20 19:44:38] 2025-11-20 18:44:05,663 | INFO     | mean x: 1763618870.8950617
[2025-11-20 19:44:38] 2025-11-20 18:44:05,663 | INFO     | mean y: 2896027.7482853225
[2025-11-20 19:44:38] 2025-11-20 18:44:05,663 | INFO     | intersect: -7984078395.856201
[2025-11-20 19:44:38] 2025-11-20 18:44:05,665 | INFO     | chi2: 2.832270562062066
[2025-11-20 19:44:38] 2025-11-20 18:44:05,665 | INFO     | current chi2=2.832270562062066 (change=1.9034290918413035 %)
[2025-11-20 19:44:38] 2025-11-20 18:44:05,665 | INFO     | right removable region: 1457
[2025-11-20 19:44:38] 2025-11-20 18:44:05,667 | INFO     | sum of square deviations: 980969338190.1223
[2025-11-20 19:44:38] 2025-11-20 18:44:05,765 | INFO     | sum of deviations: 3133132308507.672
[2025-11-20 19:44:38] 2025-11-20 18:44:05,766 | INFO     | mean x: 1763619480.8896458
[2025-11-20 19:44:38] 2025-11-20 18:44:05,766 | INFO     | mean y: 2891285.2016348774
[2025-11-20 19:44:38] 2025-11-20 18:44:05,766 | INFO     | intersect: -5629958754.416982
[2025-11-20 19:44:38] 2025-11-20 18:44:05,770 | INFO     | chi2: 4.73780879439784
[2025-11-20 19:44:38] 2025-11-20 18:44:05,770 | INFO     | current chi2=4.73780879439784 (change=34.41894374697144 %)
[2025-11-20 19:44:38] 2025-11-20 18:44:05,772 | INFO     | sum of square deviations: 970979980201.7002
[2025-11-20 19:44:38] 2025-11-20 18:44:05,838 | INFO     | sum of deviations: 3025790274677.1885
[2025-11-20 19:44:38] 2025-11-20 18:44:05,839 | INFO     | mean x: 1763619633.3889267
[2025-11-20 19:44:38] 2025-11-20 18:44:05,839 | INFO     | mean y: 2892923.6657552975
[2025-11-20 19:44:38] 2025-11-20 18:44:05,839 | INFO     | intersect: -5492939373.339435
[2025-11-20 19:44:38] 2025-11-20 18:44:05,841 | INFO     | chi2: 4.668675581016007
[2025-11-20 19:44:38] 2025-11-20 18:44:05,841 | INFO     | current chi2=4.668675581016007 (change=1.4591811612063923 %)
[2025-11-20 19:44:38] 2025-11-20 18:44:05,841 | INFO     | left removable region: 20
[2025-11-20 19:44:38] 2025-11-20 18:44:05,843 | INFO     | sum of square deviations: 920127872712.3152
[2025-11-20 19:44:38] 2025-11-20 18:44:05,904 | INFO     | sum of deviations: 3634716627387.8965
[2025-11-20 19:44:38] 2025-11-20 18:44:05,905 | INFO     | mean x: 1763619450.3980515
[2025-11-20 19:44:38] 2025-11-20 18:44:05,905 | INFO     | mean y: 2907009.176757133
[2025-11-20 19:44:38] 2025-11-20 18:44:05,905 | INFO     | intersect: -6963795262.161474
[2025-11-20 19:44:38] 2025-11-20 18:44:05,907 | INFO     | chi2: 0.21952220111859858
[2025-11-20 19:44:38] 2025-11-20 18:44:05,907 | INFO     | current memory leak: 3.95 B/s (using 1437 data points, chi2=0.22)
[2025-11-20 19:44:38] 2025-11-20 18:44:05,910 | INFO     | could have reported an average CPU frequency of 1999 MHz (50 samples)
[2025-11-20 19:44:38] 2025-11-20 18:44:05,910 | INFO     | ..............................
[2025-11-20 19:44:38] 2025-11-20 18:44:05,910 | INFO     | . Timing measurements:
[2025-11-20 19:44:38] 2025-11-20 18:44:05,910 | INFO     | . get job = 0 s
[2025-11-20 19:44:38] 2025-11-20 18:44:05,910 | INFO     | . initial setup = 10 s
[2025-11-20 19:44:38] 2025-11-20 18:44:05,910 | INFO     | . payload setup = 11 s
[2025-11-20 19:44:38] 2025-11-20 18:44:05,910 | INFO     | . stage-in = 0 s
[2025-11-20 19:44:38] 2025-11-20 18:44:05,911 | INFO     | . payload execution = 89820 s
[2025-11-20 19:44:38] 2025-11-20 18:44:05,911 | INFO     | . stage-out = 3 s
[2025-11-20 19:44:38] 2025-11-20 18:44:05,911 | INFO     | . log creation = 1 s
[2025-11-20 19:44:38] 2025-11-20 18:44:05,911 | INFO     | ..............................
[2025-11-20 19:44:38] 2025-11-20 18:44:06,058 | INFO     | 
[2025-11-20 19:44:38] 2025-11-20 18:44:06,059 | INFO     | job summary report
[2025-11-20 19:44:38] 2025-11-20 18:44:06,059 | INFO     | --------------------------------------------------
[2025-11-20 19:44:38] 2025-11-20 18:44:06,059 | INFO     | PanDA job id: 6891564457
[2025-11-20 19:44:38] 2025-11-20 18:44:06,059 | INFO     | task id: 47493068
[2025-11-20 19:44:38] 2025-11-20 18:44:06,059 | INFO     | errors: (none)
[2025-11-20 19:44:38] 2025-11-20 18:44:06,059 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-20 19:44:38] 2025-11-20 18:44:06,059 | INFO     | pilot state: finished 
[2025-11-20 19:44:38] 2025-11-20 18:44:06,059 | INFO     | transexitcode: 0
[2025-11-20 19:44:38] 2025-11-20 18:44:06,060 | INFO     | exeerrorcode: 0
[2025-11-20 19:44:38] 2025-11-20 18:44:06,060 | INFO     | exeerrordiag: 
[2025-11-20 19:44:38] 2025-11-20 18:44:06,060 | INFO     | exitcode: 0
[2025-11-20 19:44:38] 2025-11-20 18:44:06,060 | INFO     | exitmsg: OK
[2025-11-20 19:44:38] 2025-11-20 18:44:06,060 | INFO     | cpuconsumptiontime: 337165 s
[2025-11-20 19:44:38] 2025-11-20 18:44:06,060 | INFO     | nevents: 1000
[2025-11-20 19:44:38] 2025-11-20 18:44:06,060 | INFO     | neventsw: 0
[2025-11-20 19:44:38] 2025-11-20 18:44:06,060 | INFO     | pid: 9321
[2025-11-20 19:44:38] 2025-11-20 18:44:06,060 | INFO     | pgrp: 9321
[2025-11-20 19:44:38] 2025-11-20 18:44:06,060 | INFO     | corecount: 8
[2025-11-20 19:44:38] 2025-11-20 18:44:06,061 | INFO     | event service: False
[2025-11-20 19:44:38] 2025-11-20 18:44:06,061 | INFO     | sizes: {0: 2297030, 1: 2297229, 12: 2297229, 23: 2297257, 34: 2297285, 41: 2297575, 44: 2297731, 89835: 2361594, 89839: 2372242, 89849: 2372210}
[2025-11-20 19:44:38] 2025-11-20 18:44:06,061 | INFO     | --------------------------------------------------
[2025-11-20 19:44:38] 2025-11-20 18:44:06,061 | INFO     | 
[2025-11-20 19:44:38] 2025-11-20 18:44:06,061 | INFO     | executing command: ls -lF /var/lib/boinc/slots/13
[2025-11-20 19:44:38] 2025-11-20 18:44:06,102 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-20 19:44:38] 2025-11-20 18:44:06,102 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-20 19:44:38] 2025-11-20 18:44:06,103 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-20 19:44:38] 2025-11-20 18:44:06,103 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-20 19:44:38] 2025-11-20 18:44:06,103 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-20 19:44:38] 2025-11-20 18:44:06,103 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-20 19:44:38] 2025-11-20 18:44:06,103 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-20 19:44:38] 2025-11-20 18:44:06,103 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-20 19:44:38] 2025-11-20 18:44:06,103 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-20 19:44:38] 2025-11-20 18:44:06,103 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-20 19:44:38] 2025-11-20 18:44:06,103 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-20 19:44:38] 2025-11-20 18:44:06,104 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-20 19:44:38] 2025-11-20 18:44:06,104 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-20 19:44:38] 2025-11-20 18:44:06,104 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-20 19:44:38] 2025-11-20 18:44:06,104 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-20 19:44:38] 2025-11-20 18:44:06,104 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-20 19:44:38] 2025-11-20 18:44:06,104 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-20 19:44:38] 2025-11-20 18:44:06,104 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-20 19:44:38] 2025-11-20 18:44:06,104 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-20 19:44:38] 2025-11-20 18:44:06,104 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-20 19:44:38] 2025-11-20 18:44:06,105 | INFO     | job 6891564457 has completed (purged errors)
[2025-11-20 19:44:38] 2025-11-20 18:44:06,105 | INFO     | overall cleanup function is called
[2025-11-20 19:44:38] 2025-11-20 18:44:07,124 | INFO     | --- collectZombieJob: --- 10, [9321]
[2025-11-20 19:44:38] 2025-11-20 18:44:07,124 | INFO     | zombie collector waiting for pid 9321
[2025-11-20 19:44:38] 2025-11-20 18:44:07,124 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-20 19:44:38] 2025-11-20 18:44:07,124 | INFO     | collected zombie processes
[2025-11-20 19:44:38] 2025-11-20 18:44:07,124 | INFO     | will attempt to kill all subprocesses of pid=9321
[2025-11-20 19:44:38] 2025-11-20 18:44:07,225 | INFO     | process IDs to be killed: [9321] (in reverse order)
[2025-11-20 19:44:38] 2025-11-20 18:44:07,302 | WARNING  | found no corresponding commands to process id(s)
[2025-11-20 19:44:38] 2025-11-20 18:44:07,303 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-20 19:44:38] 2025-11-20 18:44:07,307 | INFO     | did not find any defunct processes belonging to 9321
[2025-11-20 19:44:38] 2025-11-20 18:44:07,310 | INFO     | did not find any defunct processes belonging to 9321
[2025-11-20 19:44:38] 2025-11-20 18:44:07,312 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-20 19:44:38] 2025-11-20 18:44:07,312 | INFO     | ready for new job
[2025-11-20 19:44:38] 2025-11-20 18:44:07,312 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-20 19:44:38] 2025-11-20 18:44:07,320 | INFO     | ***************************************
[2025-11-20 19:44:38] 2025-11-20 18:44:07,320 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-20 19:44:38] 2025-11-20 18:44:07,320 | INFO     | ***************************************
[2025-11-20 19:44:38] 2025-11-20 18:44:07,320 | INFO     | 
[2025-11-20 19:44:38] 2025-11-20 18:44:07,321 | INFO     | pilot is running in a VM
[2025-11-20 19:44:38] 2025-11-20 18:44:07,321 | INFO     | architecture information:
[2025-11-20 19:44:38] 2025-11-20 18:44:07,322 | INFO     | executing command: cat /etc/os-release
[2025-11-20 19:44:38] 2025-11-20 18:44:07,344 | INFO     | cat /etc/os-release:
[2025-11-20 19:44:38] NAME="CentOS Linux"
[2025-11-20 19:44:38] VERSION="7 (Core)"
[2025-11-20 19:44:38] ID="centos"
[2025-11-20 19:44:38] ID_LIKE="rhel fedora"
[2025-11-20 19:44:38] VERSION_ID="7"
[2025-11-20 19:44:38] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-20 19:44:38] ANSI_COLOR="0;31"
[2025-11-20 19:44:38] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-20 19:44:38] HOME_URL="https://www.centos.org/"
[2025-11-20 19:44:38] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-20 19:44:38] 
[2025-11-20 19:44:38] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-20 19:44:38] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-20 19:44:38] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-20 19:44:38] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-20 19:44:38] 
[2025-11-20 19:44:38] 2025-11-20 18:44:07,345 | INFO     | ***************************************
[2025-11-20 19:44:38] 2025-11-20 18:44:07,849 | INFO     | executing command: df -mP /var/lib/boinc/slots/13
[2025-11-20 19:44:38] 2025-11-20 18:44:07,911 | INFO     | sufficient remaining disk space (494661533696 B)
[2025-11-20 19:44:38] 2025-11-20 18:44:07,911 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-20 19:44:38] 2025-11-20 18:44:07,912 | INFO     | current server update state: UPDATING_FINAL
[2025-11-20 19:44:38] 2025-11-20 18:44:07,912 | INFO     | update_server=False
[2025-11-20 19:44:38] 2025-11-20 18:44:07,912 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-20 19:44:38] 2025-11-20 18:44:07,912 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-20 19:44:38] 2025-11-20 18:44:07,913 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-20 19:44:38] 2025-11-20 18:44:08,161 | INFO     | all data control threads have been joined
[2025-11-20 19:44:38] 2025-11-20 18:44:08,310 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-20 19:44:38] 2025-11-20 18:44:08,310 | INFO     | aborting loop
[2025-11-20 19:44:38] 2025-11-20 18:44:08,681 | INFO     | all job control threads have been joined
[2025-11-20 19:44:38] 2025-11-20 18:44:08,836 | INFO     | all payload control threads have been joined
[2025-11-20 19:44:38] 2025-11-20 18:44:08,917 | INFO     | [job] retrieve thread has finished
[2025-11-20 19:44:38] 2025-11-20 18:44:08,918 | INFO     | [job] queue monitor thread has finished
[2025-11-20 19:44:38] 2025-11-20 18:44:09,128 | INFO     | [job] validate thread has finished
[2025-11-20 19:44:38] 2025-11-20 18:44:09,168 | INFO     | [data] control thread has finished
[2025-11-20 19:44:38] 2025-11-20 18:44:09,316 | INFO     | [job] job monitor thread has finished
[2025-11-20 19:44:38] 2025-11-20 18:44:09,322 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-20 19:44:38] 2025-11-20 18:44:09,345 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-20 19:44:38] 2025-11-20 18:44:09,516 | INFO     | [payload] validate_post thread has finished
[2025-11-20 19:44:38] 2025-11-20 18:44:09,577 | INFO     | [payload] failed_post thread has finished
[2025-11-20 19:44:38] 2025-11-20 18:44:09,687 | INFO     | [job] control thread has finished
[2025-11-20 19:44:38] 2025-11-20 18:44:09,816 | INFO     | [payload] validate_pre thread has finished
[2025-11-20 19:44:38] 2025-11-20 18:44:09,841 | INFO     | [payload] control thread has finished
[2025-11-20 19:44:38] 2025-11-20 18:44:09,971 | INFO     | [payload] execute_payloads thread has finished
[2025-11-20 19:44:38] 2025-11-20 18:44:10,216 | INFO     | [data] copytool_in thread has finished
[2025-11-20 19:44:38] 2025-11-20 18:44:10,220 | INFO     | [job] create_data_payload thread has finished
[2025-11-20 19:44:38] 2025-11-20 18:44:11,352 | INFO     | [data] copytool_out thread has finished
[2025-11-20 19:44:38] 2025-11-20 18:44:11,921 | INFO     | [data] queue_monitor thread has finished
[2025-11-20 19:44:38] 2025-11-20 18:44:19,527 | INFO     | [monitor] cgroup control has ended
[2025-11-20 19:44:38] 2025-11-20 18:44:19,797 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139760482342720)>', '<ExcThread(monitor, started 139759871567616)>']
[2025-11-20 19:44:38] 2025-11-20 18:44:24,823 | INFO     | all workflow threads have been joined
[2025-11-20 19:44:38] 2025-11-20 18:44:24,823 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-20 19:44:38] 2025-11-20 18:44:24,823 | INFO     | traces error code: 0
[2025-11-20 19:44:38] 2025-11-20 18:44:24,824 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-20 19:44:38] 2025-11-20 18:44:37,319 | INFO     | PID=2737 has CPU usage=9.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-11-20 19:44:38] 2025-11-20 18:44:37,319 | INFO     | .. there are 9 such processes running
[2025-11-20 19:44:38] 2025-11-20 18:44:37,320 | INFO     | found 0 job(s) in 20 queues
[2025-11-20 19:44:38] 2025-11-20 18:44:37,320 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-20 19:44:38] 2025-11-20 18:44:37,320 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-20 19:44:38] 2025-11-20 18:44:37,320 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-20 19:44:38] 2025-11-20 18:44:37,321 | INFO     | [monitor] control thread has ended
[2025-11-20 19:44:38] 2025-11-20 18:44:37,601 [wrapper] ==== pilot stdout END ====
[2025-11-20 19:44:38] 2025-11-20 18:44:37,643 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-20 19:44:38] 2025-11-20 18:44:37,665 [wrapper] pilotpid: 2737
[2025-11-20 19:44:38] 2025-11-20 18:44:37,736 [wrapper] Pilot exit status: 0
[2025-11-20 19:44:38] 2025-11-20 18:44:37,840 [wrapper] pandaids: 6891564457
[2025-11-20 19:44:38] 2025-11-20 18:44:37,936 [wrapper] cleanup supervisor_pilot 16287 2738
[2025-11-20 19:44:38] 2025-11-20 18:44:37,964 [wrapper] Test setup, not cleaning
[2025-11-20 19:44:38] 2025-11-20 18:44:37,991 [wrapper] apfmon messages muted
[2025-11-20 19:44:38] 2025-11-20 18:44:38,013 [wrapper] ==== wrapper stdout END ====
[2025-11-20 19:44:38] 2025-11-20 18:44:38,024 [wrapper] ==== wrapper stderr END ====
[2025-11-20 19:44:38]  *** Error codes and diagnostics ***
[2025-11-20 19:44:38]     "exeErrorCode": 0,
[2025-11-20 19:44:38]     "exeErrorDiag": "",
[2025-11-20 19:44:38]     "pilotErrorCode": 0,
[2025-11-20 19:44:38]     "pilotErrorDiag": "",
[2025-11-20 19:44:38]  *** Listing of results directory ***
[2025-11-20 19:44:38] total 1321684
[2025-11-20 19:44:38] -rw-r--r--. 1 boinc boinc    576529 Nov 18 16:15 pilot3.tar.gz
[2025-11-20 19:44:38] -rw-r--r--. 1 boinc boinc      5112 Nov 18 16:29 queuedata.json
[2025-11-20 19:44:38] -rwx------. 1 boinc boinc     36292 Nov 18 16:29 runpilot2-wrapper.sh
[2025-11-20 19:44:38] -rw-r--r--. 1 boinc boinc       100 Nov 19 18:41 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-20 19:44:38] -rwxr-xr-x. 1 boinc boinc      7986 Nov 19 18:41 run_atlas
[2025-11-20 19:44:38] -rw-r--r--. 1 boinc boinc       105 Nov 19 18:41 job.xml
[2025-11-20 19:44:38] -rw-r--r--. 2 boinc boinc 408136271 Nov 19 18:41 EVNT.47493065._000120.pool.root.1
[2025-11-20 19:44:38] -rw-r--r--. 1 boinc boinc      6390 Nov 19 18:41 init_data.xml
[2025-11-20 19:44:38] -rw-r--r--. 2 boinc boinc     15120 Nov 19 18:41 start_atlas.sh
[2025-11-20 19:44:38] drwxrwx--x. 2 boinc boinc        68 Nov 19 18:41 shared
[2025-11-20 19:44:38] -rw-r--r--. 2 boinc boinc    590098 Nov 19 18:41 input.tar.gz
[2025-11-20 19:44:38] -rw-r--r--. 1 boinc boinc         0 Nov 19 18:41 boinc_lockfile
[2025-11-20 19:44:38] -rw-r--r--. 1 boinc boinc      2773 Nov 19 18:41 pandaJob.out
[2025-11-20 19:44:38] -rw-------. 1 boinc boinc    989434 Nov 19 18:45 agis_schedconf.cvmfs.json
[2025-11-20 19:44:38] drwx------. 5 boinc boinc      4096 Nov 19 18:45 pilot3
[2025-11-20 19:44:38] -rw-r--r--. 1 boinc boinc       533 Nov 20 19:30 boinc_task_state.xml
[2025-11-20 19:44:38] -rw-------. 1 boinc boinc 912413801 Nov 20 19:43 HITS.47493068._001199.pool.root.1
[2025-11-20 19:44:38] -rw-------. 1 boinc boinc      1033 Nov 20 19:43 memory_monitor_summary.json
[2025-11-20 19:44:38] -rw-------. 1 boinc boinc   1526164 Nov 20 19:43 agis_ddmendpoints.agis.ALL.json
[2025-11-20 19:44:38] -rw-------. 1 boinc boinc   2540990 Nov 20 19:43 log.47493068._001199.job.log.tgz.1
[2025-11-20 19:44:38] -rw-------. 1 boinc boinc      8629 Nov 20 19:44 heartbeat.json
[2025-11-20 19:44:38] -rw-r--r--. 1 boinc boinc      8192 Nov 20 19:44 boinc_mmap_file
[2025-11-20 19:44:38] -rw-r--r--. 1 boinc boinc        29 Nov 20 19:44 wrapper_checkpoint.txt
[2025-11-20 19:44:38] -rw-------. 1 boinc boinc        95 Nov 20 19:44 pilot_heartbeat.json
[2025-11-20 19:44:38] -rw-------. 1 boinc boinc       819 Nov 20 19:44 pilotlog.txt
[2025-11-20 19:44:38] -rw-------. 1 boinc boinc  11931888 Nov 20 19:44 log.47493068._001199.job.log.1
[2025-11-20 19:44:38] -rw-------. 1 boinc boinc       353 Nov 20 19:44 output.list
[2025-11-20 19:44:38] -rw-r--r--. 1 boinc boinc       620 Nov 20 19:44 runtime_log
[2025-11-20 19:44:38] -rw-------. 1 boinc boinc  14489600 Nov 20 19:44 result.tar.gz
[2025-11-20 19:44:38] -rw-r--r--. 1 boinc boinc      8717 Nov 20 19:44 runtime_log.err
[2025-11-20 19:44:38] -rw-------. 1 boinc boinc       662 Nov 20 19:44 cEJKDmYpcf8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmqFFKDmmxwhQn.diag
[2025-11-20 19:44:38] -rw-r--r--. 1 boinc boinc     20800 Nov 20 19:44 stderr.txt
[2025-11-20 19:44:38] HITS file was successfully produced:
[2025-11-20 19:44:38] -rw-------. 1 boinc boinc 912413801 Nov 20 19:43 shared/HITS.pool.root.1
[2025-11-20 19:44:38]  *** Contents of shared directory: ***
[2025-11-20 19:44:38] total 1304352
[2025-11-20 19:44:38] -rw-r--r--. 2 boinc boinc 408136271 Nov 19 18:41 ATLAS.root_0
[2025-11-20 19:44:38] -rw-r--r--. 2 boinc boinc     15120 Nov 19 18:41 start_atlas.sh
[2025-11-20 19:44:38] -rw-r--r--. 2 boinc boinc    590098 Nov 19 18:41 input.tar.gz
[2025-11-20 19:44:38] -rw-------. 1 boinc boinc 912413801 Nov 20 19:43 HITS.pool.root.1
[2025-11-20 19:44:38] -rw-------. 1 boinc boinc  14489600 Nov 20 19:44 result.tar.gz
19:44:39 (31326): run_atlas exited; CPU time 337620.533239
19:44:39 (31326): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN