Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
20:38:46 (7280): wrapper (7.7.26015): starting
20:38:46 (7280): wrapper: running run_atlas (--nthreads 8)
[2025-11-20 20:38:46] Arguments: --nthreads 8
[2025-11-20 20:38:46] Threads: 8
[2025-11-20 20:38:46] Checking for CVMFS
[2025-11-20 20:38:46] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-20 20:38:46] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-20 20:38:46] Running cvmfs_config stat atlas.cern.ch
[2025-11-20 20:38:47] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-20 20:38:47] 2.11.2.0 15591 80458 103224 153088 1 294 20966127 25165824 4147 130560 3 21800270 99.862 12931815 2075 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-11-20 20:38:47] CVMFS is ok
[2025-11-20 20:38:47] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-20 20:38:47] Checking for apptainer binary...
[2025-11-20 20:38:47] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-20 20:38:47] Running /usr/bin/apptainer --version
[2025-11-20 20:38:47] apptainer version 1.3.2-1.el7
[2025-11-20 20:38:47] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-20 20:38:48] cg-vwn260.simple-grid.lan
[2025-11-20 20:38:48] apptainer works
[2025-11-20 20:38:48] Set ATHENA_PROC_NUMBER=8
[2025-11-20 20:38:48] Set ATHENA_CORE_NUMBER=8
[2025-11-20 20:38:48] Starting ATLAS job with PandaID=6891562520
[2025-11-20 20:38:48] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/8 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-21 22:02:02]  *** The last 200 lines of the pilot log: ***
[2025-11-21 22:02:02] 2025-11-21 21:00:47,520 | INFO     | monitor loop #6158: job 0:6891562520 is in state 'finished'
[2025-11-21 22:02:02] 2025-11-21 21:00:47,521 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-21 22:02:02] 2025-11-21 21:00:48,436 | INFO     | time since job start (91294s) is within the limit (172800.0s)
[2025-11-21 22:02:02] 2025-11-21 21:00:50,025 | INFO     | monitor loop #6159: job 0:6891562520 is in state 'finished'
[2025-11-21 22:02:02] 2025-11-21 21:00:50,026 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-21 22:02:02] 2025-11-21 21:00:50,442 | INFO     | time since job start (91296s) is within the limit (172800.0s)
[2025-11-21 22:02:02] 2025-11-21 21:00:52,452 | INFO     | time since job start (91298s) is within the limit (172800.0s)
[2025-11-21 22:02:02] 2025-11-21 21:00:52,531 | INFO     | monitor loop #6160: job 0:6891562520 is in state 'finished'
[2025-11-21 22:02:02] 2025-11-21 21:00:52,532 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-21 22:02:02] 2025-11-21 21:00:54,467 | INFO     | time since job start (91300s) is within the limit (172800.0s)
[2025-11-21 22:02:02] 2025-11-21 21:00:55,036 | INFO     | monitor loop #6161: job 0:6891562520 is in state 'finished'
[2025-11-21 22:02:02] 2025-11-21 21:00:55,037 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-21 22:02:02] 2025-11-21 21:00:56,475 | INFO     | time since job start (91302s) is within the limit (172800.0s)
[2025-11-21 22:02:02] 2025-11-21 21:00:57,541 | INFO     | monitor loop #6162: job 0:6891562520 is in state 'finished'
[2025-11-21 22:02:02] 2025-11-21 21:00:57,542 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-21 22:02:02] 2025-11-21 21:00:58,481 | INFO     | time since job start (91304s) is within the limit (172800.0s)
[2025-11-21 22:02:02] 2025-11-21 21:00:58,625 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-21 22:02:02] 2025-11-21 21:00:58,626 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2025-11-21 22:02:02] 2025-11-21 21:00:58,628 | INFO     | using path: /var/lib/boinc/slots/8/PanDA_Pilot-6891562520/memory_monitor_summary.json (trf name=prmon)
[2025-11-21 22:02:02] 2025-11-21 21:00:58,629 | INFO     | extracted standard info from prmon json
[2025-11-21 22:02:02] 2025-11-21 21:00:58,629 | INFO     | extracted standard memory fields from prmon json
[2025-11-21 22:02:02] 2025-11-21 21:00:58,629 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-21 22:02:02] 2025-11-21 21:00:58,659 | INFO     | fitting pss+swap vs Time
[2025-11-21 22:02:02] 2025-11-21 21:00:58,661 | INFO     | sum of square deviations: 1025738652113.1693
[2025-11-21 22:02:02] 2025-11-21 21:00:58,721 | INFO     | sum of deviations: 3017306057190.0137
[2025-11-21 22:02:02] 2025-11-21 21:00:58,721 | INFO     | mean x: 1763713309.890604
[2025-11-21 22:02:02] 2025-11-21 21:00:58,721 | INFO     | mean y: 2855597.9080536915
[2025-11-21 22:02:02] 2025-11-21 21:00:58,721 | INFO     | intersect: -5185271847.729464
[2025-11-21 22:02:02] 2025-11-21 21:00:58,723 | INFO     | chi2: 20.294760343309292
[2025-11-21 22:02:02] 2025-11-21 21:00:58,725 | INFO     | sum of square deviations: 1015447658540.969
[2025-11-21 22:02:02] 2025-11-21 21:00:58,784 | INFO     | sum of deviations: 3503263956946.329
[2025-11-21 22:02:02] 2025-11-21 21:00:58,785 | INFO     | mean x: 1763713157.395286
[2025-11-21 22:02:02] 2025-11-21 21:00:58,785 | INFO     | mean y: 2862798.018181818
[2025-11-21 22:02:02] 2025-11-21 21:00:58,785 | INFO     | intersect: -6081894680.838743
[2025-11-21 22:02:02] 2025-11-21 21:00:58,787 | INFO     | chi2: 17.271477624560628
[2025-11-21 22:02:02] 2025-11-21 21:00:58,787 | INFO     | current chi2=17.271477624560628 (change=14.896863365747356 %)
[2025-11-21 22:02:02] 2025-11-21 21:00:58,787 | INFO     | right removable region: 1484
[2025-11-21 22:02:02] 2025-11-21 21:00:58,789 | INFO     | sum of square deviations: 1015446394620.969
[2025-11-21 22:02:02] 2025-11-21 21:00:58,850 | INFO     | sum of deviations: 2394929229974.7734
[2025-11-21 22:02:02] 2025-11-21 21:00:58,850 | INFO     | mean x: 1763713462.395286
[2025-11-21 22:02:02] 2025-11-21 21:00:58,850 | INFO     | mean y: 2864819.368350168
[2025-11-21 22:02:02] 2025-11-21 21:00:58,850 | INFO     | intersect: -4156851485.4663777
[2025-11-21 22:02:02] 2025-11-21 21:00:58,852 | INFO     | chi2: 15.649426304469763
[2025-11-21 22:02:02] 2025-11-21 21:00:58,852 | INFO     | current chi2=15.649426304469763 (change=22.88932690141861 %)
[2025-11-21 22:02:02] 2025-11-21 21:00:58,853 | INFO     | left removable region: 10
[2025-11-21 22:02:02] 2025-11-21 21:00:58,855 | INFO     | sum of square deviations: 993047747533.8942
[2025-11-21 22:02:02] 2025-11-21 21:00:58,914 | INFO     | sum of deviations: 2450251002907.9595
[2025-11-21 22:02:02] 2025-11-21 21:00:58,914 | INFO     | mean x: 1763713431.9056988
[2025-11-21 22:02:02] 2025-11-21 21:00:58,914 | INFO     | mean y: 2881877.1004070556
[2025-11-21 22:02:02] 2025-11-21 21:00:58,914 | INFO     | intersect: -4348913508.470092
[2025-11-21 22:02:02] 2025-11-21 21:00:58,916 | INFO     | chi2: 8.378629899595246
[2025-11-21 22:02:02] 2025-11-21 21:00:58,916 | INFO     | current memory leak: 2.47 B/s (using 1474 data points, chi2=8.38)
[2025-11-21 22:02:02] 2025-11-21 21:00:58,919 | INFO     | could have reported an average CPU frequency of 1999 MHz (51 samples)
[2025-11-21 22:02:02] 2025-11-21 21:00:58,919 | INFO     | ..............................
[2025-11-21 22:02:02] 2025-11-21 21:00:58,919 | INFO     | . Timing measurements:
[2025-11-21 22:02:02] 2025-11-21 21:00:58,919 | INFO     | . get job = 0 s
[2025-11-21 22:02:02] 2025-11-21 21:00:58,919 | INFO     | . initial setup = 3 s
[2025-11-21 22:02:02] 2025-11-21 21:00:58,919 | INFO     | . payload setup = 127 s
[2025-11-21 22:02:02] 2025-11-21 21:00:58,919 | INFO     | . stage-in = 0 s
[2025-11-21 22:02:02] 2025-11-21 21:00:58,919 | INFO     | . payload execution = 91038 s
[2025-11-21 22:02:02] 2025-11-21 21:00:58,920 | INFO     | . stage-out = 5 s
[2025-11-21 22:02:02] 2025-11-21 21:00:58,920 | INFO     | . log creation = 1 s
[2025-11-21 22:02:02] 2025-11-21 21:00:58,920 | INFO     | ..............................
[2025-11-21 22:02:02] 2025-11-21 21:00:59,052 | INFO     | 
[2025-11-21 22:02:02] 2025-11-21 21:00:59,053 | INFO     | job summary report
[2025-11-21 22:02:02] 2025-11-21 21:00:59,053 | INFO     | --------------------------------------------------
[2025-11-21 22:02:02] 2025-11-21 21:00:59,053 | INFO     | PanDA job id: 6891562520
[2025-11-21 22:02:02] 2025-11-21 21:00:59,053 | INFO     | task id: 47493068
[2025-11-21 22:02:02] 2025-11-21 21:00:59,053 | INFO     | errors: (none)
[2025-11-21 22:02:02] 2025-11-21 21:00:59,053 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-21 22:02:02] 2025-11-21 21:00:59,053 | INFO     | pilot state: finished 
[2025-11-21 22:02:02] 2025-11-21 21:00:59,053 | INFO     | transexitcode: 0
[2025-11-21 22:02:02] 2025-11-21 21:00:59,053 | INFO     | exeerrorcode: 0
[2025-11-21 22:02:02] 2025-11-21 21:00:59,053 | INFO     | exeerrordiag: 
[2025-11-21 22:02:02] 2025-11-21 21:00:59,053 | INFO     | exitcode: 0
[2025-11-21 22:02:02] 2025-11-21 21:00:59,054 | INFO     | exitmsg: OK
[2025-11-21 22:02:02] 2025-11-21 21:00:59,054 | INFO     | cpuconsumptiontime: 334124 s
[2025-11-21 22:02:02] 2025-11-21 21:00:59,054 | INFO     | nevents: 1000
[2025-11-21 22:02:02] 2025-11-21 21:00:59,054 | INFO     | neventsw: 0
[2025-11-21 22:02:02] 2025-11-21 21:00:59,054 | INFO     | pid: 25103
[2025-11-21 22:02:02] 2025-11-21 21:00:59,054 | INFO     | pgrp: 25103
[2025-11-21 22:02:02] 2025-11-21 21:00:59,054 | INFO     | corecount: 8
[2025-11-21 22:02:02] 2025-11-21 21:00:59,054 | INFO     | event service: False
[2025-11-21 22:02:02] 2025-11-21 21:00:59,054 | INFO     | sizes: {0: 2298625, 1: 2298824, 12: 2298824, 14: 2299114, 23: 2299142, 91167: 2362229, 91173: 2371223, 91176: 2371279, 91264: 2371303}
[2025-11-21 22:02:02] 2025-11-21 21:00:59,054 | INFO     | --------------------------------------------------
[2025-11-21 22:02:02] 2025-11-21 21:00:59,054 | INFO     | 
[2025-11-21 22:02:02] 2025-11-21 21:00:59,054 | INFO     | executing command: ls -lF /var/lib/boinc/slots/8
[2025-11-21 22:02:02] 2025-11-21 21:00:59,610 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-21 22:02:02] 2025-11-21 21:00:59,610 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-21 22:02:02] 2025-11-21 21:00:59,610 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-21 22:02:02] 2025-11-21 21:00:59,610 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-21 22:02:02] 2025-11-21 21:00:59,611 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-21 22:02:02] 2025-11-21 21:00:59,611 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-21 22:02:02] 2025-11-21 21:00:59,611 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-21 22:02:02] 2025-11-21 21:00:59,611 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-21 22:02:02] 2025-11-21 21:00:59,611 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-21 22:02:02] 2025-11-21 21:00:59,611 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-21 22:02:02] 2025-11-21 21:00:59,611 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-21 22:02:02] 2025-11-21 21:00:59,611 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-21 22:02:02] 2025-11-21 21:00:59,611 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-21 22:02:02] 2025-11-21 21:00:59,611 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-21 22:02:02] 2025-11-21 21:00:59,611 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-21 22:02:02] 2025-11-21 21:00:59,611 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-21 22:02:02] 2025-11-21 21:00:59,612 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-21 22:02:02] 2025-11-21 21:00:59,612 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-21 22:02:02] 2025-11-21 21:00:59,612 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-21 22:02:02] 2025-11-21 21:00:59,612 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-21 22:02:02] 2025-11-21 21:00:59,612 | INFO     | job 6891562520 has completed (purged errors)
[2025-11-21 22:02:02] 2025-11-21 21:00:59,612 | INFO     | overall cleanup function is called
[2025-11-21 22:02:02] 2025-11-21 21:01:00,634 | INFO     | --- collectZombieJob: --- 10, [25103]
[2025-11-21 22:02:02] 2025-11-21 21:01:00,635 | INFO     | zombie collector waiting for pid 25103
[2025-11-21 22:02:02] 2025-11-21 21:01:00,635 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-21 22:02:02] 2025-11-21 21:01:00,635 | INFO     | collected zombie processes
[2025-11-21 22:02:02] 2025-11-21 21:01:00,635 | INFO     | will attempt to kill all subprocesses of pid=25103
[2025-11-21 22:02:02] 2025-11-21 21:01:00,776 | INFO     | process IDs to be killed: [25103] (in reverse order)
[2025-11-21 22:02:02] 2025-11-21 21:01:00,880 | WARNING  | found no corresponding commands to process id(s)
[2025-11-21 22:02:02] 2025-11-21 21:01:00,881 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-21 22:02:02] 2025-11-21 21:01:00,893 | INFO     | did not find any defunct processes belonging to 25103
[2025-11-21 22:02:02] 2025-11-21 21:01:00,897 | INFO     | did not find any defunct processes belonging to 25103
[2025-11-21 22:02:02] 2025-11-21 21:01:00,903 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-21 22:02:02] 2025-11-21 21:01:00,904 | INFO     | ready for new job
[2025-11-21 22:02:02] 2025-11-21 21:01:00,904 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-21 22:02:02] 2025-11-21 21:01:00,911 | INFO     | ***************************************
[2025-11-21 22:02:02] 2025-11-21 21:01:00,911 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-21 22:02:02] 2025-11-21 21:01:00,911 | INFO     | ***************************************
[2025-11-21 22:02:02] 2025-11-21 21:01:00,911 | INFO     | 
[2025-11-21 22:02:02] 2025-11-21 21:01:00,912 | INFO     | pilot is running in a VM
[2025-11-21 22:02:02] 2025-11-21 21:01:00,912 | INFO     | architecture information:
[2025-11-21 22:02:02] 2025-11-21 21:01:00,913 | INFO     | executing command: cat /etc/os-release
[2025-11-21 22:02:02] 2025-11-21 21:01:01,048 | INFO     | cat /etc/os-release:
[2025-11-21 22:02:02] NAME="CentOS Linux"
[2025-11-21 22:02:02] VERSION="7 (Core)"
[2025-11-21 22:02:02] ID="centos"
[2025-11-21 22:02:02] ID_LIKE="rhel fedora"
[2025-11-21 22:02:02] VERSION_ID="7"
[2025-11-21 22:02:02] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-21 22:02:02] ANSI_COLOR="0;31"
[2025-11-21 22:02:02] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-21 22:02:02] HOME_URL="https://www.centos.org/"
[2025-11-21 22:02:02] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-21 22:02:02] 
[2025-11-21 22:02:02] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-21 22:02:02] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-21 22:02:02] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-21 22:02:02] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-21 22:02:02] 
[2025-11-21 22:02:02] 2025-11-21 21:01:01,049 | INFO     | ***************************************
[2025-11-21 22:02:02] 2025-11-21 21:01:01,553 | INFO     | executing command: df -mP /var/lib/boinc/slots/8
[2025-11-21 22:02:02] 2025-11-21 21:01:01,620 | INFO     | sufficient remaining disk space (493908656128 B)
[2025-11-21 22:02:02] 2025-11-21 21:01:01,621 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-21 22:02:02] 2025-11-21 21:01:01,621 | INFO     | current server update state: UPDATING_FINAL
[2025-11-21 22:02:02] 2025-11-21 21:01:01,621 | INFO     | update_server=False
[2025-11-21 22:02:02] 2025-11-21 21:01:01,621 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-21 22:02:02] 2025-11-21 21:01:01,622 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-21 22:02:02] 2025-11-21 21:01:01,622 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-21 22:02:02] 2025-11-21 21:01:01,622 | INFO     | aborting loop
[2025-11-21 22:02:02] 2025-11-21 21:01:01,646 | INFO     | all data control threads have been joined
[2025-11-21 22:02:02] 2025-11-21 21:01:01,649 | INFO     | all payload control threads have been joined
[2025-11-21 22:02:02] 2025-11-21 21:01:02,506 | INFO     | all job control threads have been joined
[2025-11-21 22:02:02] 2025-11-21 21:01:02,628 | INFO     | [job] retrieve thread has finished
[2025-11-21 22:02:02] 2025-11-21 21:01:02,628 | INFO     | [job] job monitor thread has finished
[2025-11-21 22:02:02] 2025-11-21 21:01:02,653 | INFO     | [data] control thread has finished
[2025-11-21 22:02:02] 2025-11-21 21:01:02,655 | INFO     | [payload] control thread has finished
[2025-11-21 22:02:02] 2025-11-21 21:01:02,910 | INFO     | [job] create_data_payload thread has finished
[2025-11-21 22:02:02] 2025-11-21 21:01:02,977 | INFO     | [payload] execute_payloads thread has finished
[2025-11-21 22:02:02] 2025-11-21 21:01:03,309 | INFO     | [data] copytool_in thread has finished
[2025-11-21 22:02:02] 2025-11-21 21:01:03,318 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-21 22:02:02] 2025-11-21 21:01:03,326 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-21 22:02:02] 2025-11-21 21:01:03,349 | INFO     | [payload] failed_post thread has finished
[2025-11-21 22:02:02] 2025-11-21 21:01:03,393 | INFO     | [payload] validate_pre thread has finished
[2025-11-21 22:02:02] 2025-11-21 21:01:03,509 | INFO     | [payload] validate_post thread has finished
[2025-11-21 22:02:02] 2025-11-21 21:01:03,511 | INFO     | [job] control thread has finished
[2025-11-21 22:02:02] 2025-11-21 21:01:03,571 | INFO     | [job] validate thread has finished
[2025-11-21 22:02:02] 2025-11-21 21:01:03,629 | INFO     | [data] copytool_out thread has finished
[2025-11-21 22:02:02] 2025-11-21 21:01:04,069 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-21 22:02:02] 2025-11-21 21:01:05,075 | INFO     | [job] queue monitor thread has finished
[2025-11-21 22:02:02] 2025-11-21 21:01:07,335 | INFO     | [data] queue_monitor thread has finished
[2025-11-21 22:02:02] 2025-11-21 21:01:31,693 | INFO     | PID=12661 has CPU usage=1.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-21 22:02:02] 2025-11-21 21:01:31,694 | INFO     | .. there are 9 such processes running
[2025-11-21 22:02:02] 2025-11-21 21:01:31,696 | INFO     | found 0 job(s) in 20 queues
[2025-11-21 22:02:02] 2025-11-21 21:01:31,696 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-21 22:02:02] 2025-11-21 21:01:31,696 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-21 22:02:02] 2025-11-21 21:01:53,419 | INFO     | [monitor] cgroup control has ended
[2025-11-21 22:02:02] 2025-11-21 21:01:54,964 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140620029843264)>', '<ExcThread(monitor, started 140619737442048)>']
[2025-11-21 22:02:02] 2025-11-21 21:01:55,839 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-21 22:02:02] 2025-11-21 21:01:55,840 | INFO     | [monitor] control thread has ended
[2025-11-21 22:02:02] 2025-11-21 21:01:59,990 | INFO     | all workflow threads have been joined
[2025-11-21 22:02:02] 2025-11-21 21:01:59,991 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-21 22:02:02] 2025-11-21 21:01:59,991 | INFO     | traces error code: 0
[2025-11-21 22:02:02] 2025-11-21 21:01:59,991 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-21 22:02:02] 2025-11-21 21:02:00,298 [wrapper] ==== pilot stdout END ====
[2025-11-21 22:02:02] 2025-11-21 21:02:00,306 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-21 22:02:02] 2025-11-21 21:02:00,319 [wrapper] pilotpid: 12661
[2025-11-21 22:02:02] 2025-11-21 21:02:00,329 [wrapper] Pilot exit status: 0
[2025-11-21 22:02:02] 2025-11-21 21:02:00,364 [wrapper] pandaids: 6891562520
[2025-11-21 22:02:02] 2025-11-21 21:02:00,510 [wrapper] cleanup supervisor_pilot 16766 12662
[2025-11-21 22:02:02] 2025-11-21 21:02:00,611 [wrapper] Test setup, not cleaning
[2025-11-21 22:02:02] 2025-11-21 21:02:00,722 [wrapper] apfmon messages muted
[2025-11-21 22:02:02] 2025-11-21 21:02:00,819 [wrapper] ==== wrapper stdout END ====
[2025-11-21 22:02:02] 2025-11-21 21:02:00,896 [wrapper] ==== wrapper stderr END ====
[2025-11-21 22:02:02]  *** Error codes and diagnostics ***
[2025-11-21 22:02:02]     "exeErrorCode": 0,
[2025-11-21 22:02:02]     "exeErrorDiag": "",
[2025-11-21 22:02:02]     "pilotErrorCode": 0,
[2025-11-21 22:02:02]     "pilotErrorDiag": "",
[2025-11-21 22:02:02]  *** Listing of results directory ***
[2025-11-21 22:02:02] total 1317856
[2025-11-21 22:02:02] -rw-r--r--. 1 boinc boinc    576529 Nov 18 16:15 pilot3.tar.gz
[2025-11-21 22:02:02] -rw-r--r--. 1 boinc boinc      5112 Nov 18 16:27 queuedata.json
[2025-11-21 22:02:02] -rwx------. 1 boinc boinc     36292 Nov 18 16:27 runpilot2-wrapper.sh
[2025-11-21 22:02:02] -rw-r--r--. 1 boinc boinc       100 Nov 20 20:38 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-21 22:02:02] -rwxr-xr-x. 1 boinc boinc      7986 Nov 20 20:38 run_atlas
[2025-11-21 22:02:02] -rw-r--r--. 1 boinc boinc       105 Nov 20 20:38 job.xml
[2025-11-21 22:02:02] -rw-r--r--. 2 boinc boinc 408785196 Nov 20 20:38 EVNT.47493065._000107.pool.root.1
[2025-11-21 22:02:02] -rw-r--r--. 1 boinc boinc      6391 Nov 20 20:38 init_data.xml
[2025-11-21 22:02:02] drwxrwx--x. 2 boinc boinc        68 Nov 20 20:38 shared
[2025-11-21 22:02:02] -rw-r--r--. 2 boinc boinc    590105 Nov 20 20:38 input.tar.gz
[2025-11-21 22:02:02] -rw-r--r--. 2 boinc boinc     15120 Nov 20 20:38 start_atlas.sh
[2025-11-21 22:02:02] -rw-r--r--. 1 boinc boinc         0 Nov 20 20:38 boinc_lockfile
[2025-11-21 22:02:02] -rw-r--r--. 1 boinc boinc      2773 Nov 20 20:38 pandaJob.out
[2025-11-21 22:02:02] -rw-------. 1 boinc boinc    989440 Nov 20 20:39 agis_schedconf.cvmfs.json
[2025-11-21 22:02:02] drwx------. 5 boinc boinc      4096 Nov 20 20:39 pilot3
[2025-11-21 22:02:02] -rw-r--r--. 1 boinc boinc       533 Nov 21 21:36 boinc_task_state.xml
[2025-11-21 22:02:02] -rw-------. 1 boinc boinc 907239912 Nov 21 21:58 HITS.47493068._001065.pool.root.1
[2025-11-21 22:02:02] -rw-------. 1 boinc boinc      1035 Nov 21 21:59 memory_monitor_summary.json
[2025-11-21 22:02:02] -rw-------. 1 boinc boinc   1526164 Nov 21 21:59 agis_ddmendpoints.agis.ALL.json
[2025-11-21 22:02:02] -rw-------. 1 boinc boinc   2556128 Nov 21 21:59 log.47493068._001065.job.log.tgz.1
[2025-11-21 22:02:02] -rw-------. 1 boinc boinc      7944 Nov 21 22:00 heartbeat.json
[2025-11-21 22:02:02] -rw-------. 1 boinc boinc        95 Nov 21 22:01 pilot_heartbeat.json
[2025-11-21 22:02:02] -rw-------. 1 boinc boinc      4884 Nov 21 22:01 pilotlog.txt
[2025-11-21 22:02:02] -rw-------. 1 boinc boinc  12227651 Nov 21 22:02 log.47493068._001065.job.log.1
[2025-11-21 22:02:02] -rw-r--r--. 1 boinc boinc      8192 Nov 21 22:02 boinc_mmap_file
[2025-11-21 22:02:02] -rw-r--r--. 1 boinc boinc        29 Nov 21 22:02 wrapper_checkpoint.txt
[2025-11-21 22:02:02] -rw-------. 1 boinc boinc       353 Nov 21 22:02 output.list
[2025-11-21 22:02:02] -rw-r--r--. 1 boinc boinc       620 Nov 21 22:02 runtime_log
[2025-11-21 22:02:02] -rw-------. 1 boinc boinc  14807040 Nov 21 22:02 result.tar.gz
[2025-11-21 22:02:02] -rw-r--r--. 1 boinc boinc      8703 Nov 21 22:02 runtime_log.err
[2025-11-21 22:02:02] -rw-------. 1 boinc boinc       662 Nov 21 22:02 kJHMDmXncf8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmDDFKDmbppyPo.diag
[2025-11-21 22:02:02] -rw-r--r--. 1 boinc boinc      1837 Nov 21 22:02 stderr.txt
[2025-11-21 22:02:02] HITS file was successfully produced:
[2025-11-21 22:02:02] -rw-------. 1 boinc boinc 907239912 Nov 21 21:58 shared/HITS.pool.root.1
[2025-11-21 22:02:02]  *** Contents of shared directory: ***
[2025-11-21 22:02:02] total 1300244
[2025-11-21 22:02:02] -rw-r--r--. 2 boinc boinc 408785196 Nov 20 20:38 ATLAS.root_0
[2025-11-21 22:02:02] -rw-r--r--. 2 boinc boinc    590105 Nov 20 20:38 input.tar.gz
[2025-11-21 22:02:02] -rw-r--r--. 2 boinc boinc     15120 Nov 20 20:38 start_atlas.sh
[2025-11-21 22:02:02] -rw-------. 1 boinc boinc 907239912 Nov 21 21:58 HITS.pool.root.1
[2025-11-21 22:02:02] -rw-------. 1 boinc boinc  14807040 Nov 21 22:02 result.tar.gz
22:02:04 (7280): run_atlas exited; CPU time 334630.025169
22:02:04 (7280): called boinc_finish(0)

</stderr_txt>
]]>

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