Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
19:59:05 (13075): wrapper (7.7.26015): starting
19:59:05 (13075): wrapper: running run_atlas (--nthreads 8)
[2025-11-20 19:59:05] Arguments: --nthreads 8
[2025-11-20 19:59:05] Threads: 8
[2025-11-20 19:59:05] Checking for CVMFS
[2025-11-20 19:59:06] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-20 19:59:06] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-20 19:59:06] Running cvmfs_config stat atlas.cern.ch
[2025-11-20 19:59:06] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-20 19:59:06] 2.11.2.0 19767 72516 97284 153088 1 307 13537115 25165825 4112 130560 2 20984995 99.863 13037453 2327 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-11-20 19:59:06] CVMFS is ok
[2025-11-20 19:59:06] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-20 19:59:06] Checking for apptainer binary...
[2025-11-20 19:59:06] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-20 19:59:06] Running /usr/bin/apptainer --version
[2025-11-20 19:59:06] apptainer version 1.3.2-1.el7
[2025-11-20 19:59:06] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-20 19:59:08] cg-vwn305.simple-grid.lan
[2025-11-20 19:59:08] apptainer works
[2025-11-20 19:59:08] Set ATHENA_PROC_NUMBER=8
[2025-11-20 19:59:08] Set ATHENA_CORE_NUMBER=8
[2025-11-20 19:59:08] Starting ATLAS job with PandaID=6891561729
[2025-11-20 19:59:08] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-21 21:08:27]  *** The last 200 lines of the pilot log: ***
[2025-11-21 21:08:27] 2025-11-21 20:07:26,016 | INFO     | time since job start (90464s) is within the limit (172800.0s)
[2025-11-21 21:08:27] 2025-11-21 20:07:28,025 | INFO     | time since job start (90466s) is within the limit (172800.0s)
[2025-11-21 21:08:27] 2025-11-21 20:07:28,169 | INFO     | monitor loop #6054: job 0:6891561729 is in state 'finished'
[2025-11-21 21:08:27] 2025-11-21 20:07:28,169 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-21 21:08:27] 2025-11-21 20:07:30,032 | INFO     | time since job start (90468s) is within the limit (172800.0s)
[2025-11-21 21:08:27] 2025-11-21 20:07:30,678 | INFO     | monitor loop #6055: job 0:6891561729 is in state 'finished'
[2025-11-21 21:08:27] 2025-11-21 20:07:30,678 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-21 21:08:27] 2025-11-21 20:07:31,179 | INFO     | PID=21144 has CPU usage=15.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-11-21 21:08:27] 2025-11-21 20:07:31,179 | INFO     | .. there are 8 such processes running
[2025-11-21 21:08:27] 2025-11-21 20:07:32,181 | INFO     | time since job start (90470s) is within the limit (172800.0s)
[2025-11-21 21:08:27] 2025-11-21 20:07:33,184 | INFO     | monitor loop #6056: job 0:6891561729 is in state 'finished'
[2025-11-21 21:08:27] 2025-11-21 20:07:33,184 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-21 21:08:27] 2025-11-21 20:07:34,188 | INFO     | time since job start (90472s) is within the limit (172800.0s)
[2025-11-21 21:08:27] 2025-11-21 20:07:35,690 | INFO     | monitor loop #6057: job 0:6891561729 is in state 'finished'
[2025-11-21 21:08:27] 2025-11-21 20:07:35,690 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-21 21:08:27] 2025-11-21 20:07:36,195 | INFO     | time since job start (90474s) is within the limit (172800.0s)
[2025-11-21 21:08:27] 2025-11-21 20:07:37,711 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-21 21:08:27] 2025-11-21 20:07:37,712 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.9959999999996
[2025-11-21 21:08:27] 2025-11-21 20:07:37,714 | INFO     | using path: /var/lib/boinc/slots/7/PanDA_Pilot-6891561729/memory_monitor_summary.json (trf name=prmon)
[2025-11-21 21:08:27] 2025-11-21 20:07:37,715 | INFO     | extracted standard info from prmon json
[2025-11-21 21:08:27] 2025-11-21 20:07:37,715 | INFO     | extracted standard memory fields from prmon json
[2025-11-21 21:08:27] 2025-11-21 20:07:37,716 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-21 21:08:27] 2025-11-21 20:07:37,745 | INFO     | fitting pss+swap vs Time
[2025-11-21 21:08:27] 2025-11-21 20:07:37,748 | INFO     | sum of square deviations: 997094335962.43
[2025-11-21 21:08:27] 2025-11-21 20:07:37,838 | INFO     | sum of deviations: 3032071977905.8687
[2025-11-21 21:08:27] 2025-11-21 20:07:37,839 | INFO     | mean x: 1763710613.7025745
[2025-11-21 21:08:27] 2025-11-21 20:07:37,839 | INFO     | mean y: 2860510.7195121953
[2025-11-21 21:08:27] 2025-11-21 20:07:37,839 | INFO     | intersect: -5360420912.177104
[2025-11-21 21:08:27] 2025-11-21 20:07:37,841 | INFO     | chi2: 21.435577239013877
[2025-11-21 21:08:27] 2025-11-21 20:07:37,860 | INFO     | sum of square deviations: 986996064725.1736
[2025-11-21 21:08:27] 2025-11-21 20:07:37,931 | INFO     | sum of deviations: 3527389201543.481
[2025-11-21 21:08:27] 2025-11-21 20:07:37,931 | INFO     | mean x: 1763710461.2066622
[2025-11-21 21:08:27] 2025-11-21 20:07:37,932 | INFO     | mean y: 2867990.011556764
[2025-11-21 21:08:27] 2025-11-21 20:07:37,932 | INFO     | intersect: -6300392436.09962
[2025-11-21 21:08:27] 2025-11-21 20:07:37,934 | INFO     | chi2: 18.269941267755023
[2025-11-21 21:08:27] 2025-11-21 20:07:37,934 | INFO     | current chi2=18.269941267755023 (change=14.768139602497996 %)
[2025-11-21 21:08:27] 2025-11-21 20:07:37,934 | INFO     | right removable region: 1470
[2025-11-21 21:08:27] 2025-11-21 20:07:37,936 | INFO     | sum of square deviations: 986994981975.1736
[2025-11-21 21:08:27] 2025-11-21 20:07:38,006 | INFO     | sum of deviations: 2407170709175.369
[2025-11-21 21:08:27] 2025-11-21 20:07:38,007 | INFO     | mean x: 1763710766.2066622
[2025-11-21 21:08:27] 2025-11-21 20:07:38,007 | INFO     | mean y: 2869946.472467709
[2025-11-21 21:08:27] 2025-11-21 20:07:38,007 | INFO     | intersect: -4298623955.1213665
[2025-11-21 21:08:27] 2025-11-21 20:07:38,009 | INFO     | chi2: 16.64790807461819
[2025-11-21 21:08:27] 2025-11-21 20:07:38,009 | INFO     | current chi2=16.64790807461819 (change=22.33515389397528 %)
[2025-11-21 21:08:27] 2025-11-21 20:07:38,009 | INFO     | left removable region: 10
[2025-11-21 21:08:27] 2025-11-21 20:07:38,011 | INFO     | sum of square deviations: 965018213059.0367
[2025-11-21 21:08:27] 2025-11-21 20:07:38,072 | INFO     | sum of deviations: 2501070526824.7944
[2025-11-21 21:08:27] 2025-11-21 20:07:38,072 | INFO     | mean x: 1763710735.7157533
[2025-11-21 21:08:27] 2025-11-21 20:07:38,073 | INFO     | mean y: 2887162.495890411
[2025-11-21 21:08:27] 2025-11-21 20:07:38,073 | INFO     | intersect: -4568181941.951451
[2025-11-21 21:08:27] 2025-11-21 20:07:38,075 | INFO     | chi2: 9.403162912798292
[2025-11-21 21:08:27] 2025-11-21 20:07:38,075 | INFO     | current memory leak: 2.59 B/s (using 1460 data points, chi2=9.40)
[2025-11-21 21:08:27] 2025-11-21 20:07:38,077 | INFO     | could have reported an average CPU frequency of 1999 MHz (50 samples)
[2025-11-21 21:08:27] 2025-11-21 20:07:38,077 | INFO     | ..............................
[2025-11-21 21:08:27] 2025-11-21 20:07:38,077 | INFO     | . Timing measurements:
[2025-11-21 21:08:27] 2025-11-21 20:07:38,078 | INFO     | . get job = 0 s
[2025-11-21 21:08:27] 2025-11-21 20:07:38,078 | INFO     | . initial setup = 2 s
[2025-11-21 21:08:27] 2025-11-21 20:07:38,078 | INFO     | . payload setup = 157 s
[2025-11-21 21:08:27] 2025-11-21 20:07:38,078 | INFO     | . stage-in = 0 s
[2025-11-21 21:08:27] 2025-11-21 20:07:38,078 | INFO     | . payload execution = 90161 s
[2025-11-21 21:08:27] 2025-11-21 20:07:38,078 | INFO     | . stage-out = 4 s
[2025-11-21 21:08:27] 2025-11-21 20:07:38,078 | INFO     | . log creation = 1 s
[2025-11-21 21:08:27] 2025-11-21 20:07:38,078 | INFO     | ..............................
[2025-11-21 21:08:27] 2025-11-21 20:07:38,217 | INFO     | time since job start (90476s) is within the limit (172800.0s)
[2025-11-21 21:08:27] 2025-11-21 20:07:38,217 | INFO     | 
[2025-11-21 21:08:27] 2025-11-21 20:07:38,217 | INFO     | job summary report
[2025-11-21 21:08:27] 2025-11-21 20:07:38,218 | INFO     | --------------------------------------------------
[2025-11-21 21:08:27] 2025-11-21 20:07:38,218 | INFO     | PanDA job id: 6891561729
[2025-11-21 21:08:27] 2025-11-21 20:07:38,218 | INFO     | task id: 47493068
[2025-11-21 21:08:27] 2025-11-21 20:07:38,218 | INFO     | errors: (none)
[2025-11-21 21:08:27] 2025-11-21 20:07:38,218 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-21 21:08:27] 2025-11-21 20:07:38,218 | INFO     | pilot state: finished 
[2025-11-21 21:08:27] 2025-11-21 20:07:38,218 | INFO     | transexitcode: 0
[2025-11-21 21:08:27] 2025-11-21 20:07:38,218 | INFO     | exeerrorcode: 0
[2025-11-21 21:08:27] 2025-11-21 20:07:38,218 | INFO     | exeerrordiag: 
[2025-11-21 21:08:27] 2025-11-21 20:07:38,218 | INFO     | exitcode: 0
[2025-11-21 21:08:27] 2025-11-21 20:07:38,218 | INFO     | exitmsg: OK
[2025-11-21 21:08:27] 2025-11-21 20:07:38,218 | INFO     | cpuconsumptiontime: 332931 s
[2025-11-21 21:08:27] 2025-11-21 20:07:38,219 | INFO     | nevents: 1000
[2025-11-21 21:08:27] 2025-11-21 20:07:38,219 | INFO     | neventsw: 0
[2025-11-21 21:08:27] 2025-11-21 20:07:38,219 | INFO     | pid: 28665
[2025-11-21 21:08:27] 2025-11-21 20:07:38,219 | INFO     | pgrp: 28665
[2025-11-21 21:08:27] 2025-11-21 20:07:38,219 | INFO     | corecount: 8
[2025-11-21 21:08:27] 2025-11-21 20:07:38,219 | INFO     | event service: False
[2025-11-21 21:08:27] 2025-11-21 20:07:38,219 | INFO     | sizes: {0: 2298559, 1: 2298643, 2: 2298842, 13: 2298842, 23: 2298898, 34: 2298926, 44: 2299344, 45: 2299372, 90322: 2362956, 90326: 2371950, 90328: 2372006, 90343:
[2025-11-21 21:08:27] 2025-11-21 20:07:38,219 | INFO     | --------------------------------------------------
[2025-11-21 21:08:27] 2025-11-21 20:07:38,219 | INFO     | 
[2025-11-21 21:08:27] 2025-11-21 20:07:38,219 | INFO     | executing command: ls -lF /var/lib/boinc/slots/7
[2025-11-21 21:08:27] 2025-11-21 20:07:38,256 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-21 21:08:27] 2025-11-21 20:07:38,257 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-21 21:08:27] 2025-11-21 20:07:38,257 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-21 21:08:27] 2025-11-21 20:07:38,257 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-21 21:08:27] 2025-11-21 20:07:38,257 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-21 21:08:27] 2025-11-21 20:07:38,257 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-21 21:08:27] 2025-11-21 20:07:38,257 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-21 21:08:27] 2025-11-21 20:07:38,257 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-21 21:08:27] 2025-11-21 20:07:38,257 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-21 21:08:27] 2025-11-21 20:07:38,257 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-21 21:08:27] 2025-11-21 20:07:38,258 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-21 21:08:27] 2025-11-21 20:07:38,258 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-21 21:08:27] 2025-11-21 20:07:38,258 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-21 21:08:27] 2025-11-21 20:07:38,258 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-21 21:08:27] 2025-11-21 20:07:38,258 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-21 21:08:27] 2025-11-21 20:07:38,258 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-21 21:08:27] 2025-11-21 20:07:38,258 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-21 21:08:27] 2025-11-21 20:07:38,258 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-21 21:08:27] 2025-11-21 20:07:38,258 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-21 21:08:27] 2025-11-21 20:07:38,258 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-21 21:08:27] 2025-11-21 20:07:38,259 | INFO     | job 6891561729 has completed (purged errors)
[2025-11-21 21:08:27] 2025-11-21 20:07:38,259 | INFO     | overall cleanup function is called
[2025-11-21 21:08:27] 2025-11-21 20:07:39,276 | INFO     | --- collectZombieJob: --- 10, [28665]
[2025-11-21 21:08:27] 2025-11-21 20:07:39,276 | INFO     | zombie collector waiting for pid 28665
[2025-11-21 21:08:27] 2025-11-21 20:07:39,276 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-21 21:08:27] 2025-11-21 20:07:39,276 | INFO     | collected zombie processes
[2025-11-21 21:08:27] 2025-11-21 20:07:39,276 | INFO     | will attempt to kill all subprocesses of pid=28665
[2025-11-21 21:08:27] 2025-11-21 20:07:39,385 | INFO     | process IDs to be killed: [28665] (in reverse order)
[2025-11-21 21:08:27] 2025-11-21 20:07:39,513 | WARNING  | found no corresponding commands to process id(s)
[2025-11-21 21:08:27] 2025-11-21 20:07:39,513 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-21 21:08:27] 2025-11-21 20:07:39,517 | INFO     | did not find any defunct processes belonging to 28665
[2025-11-21 21:08:27] 2025-11-21 20:07:39,520 | INFO     | did not find any defunct processes belonging to 28665
[2025-11-21 21:08:27] 2025-11-21 20:07:39,522 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-21 21:08:27] 2025-11-21 20:07:39,522 | INFO     | ready for new job
[2025-11-21 21:08:27] 2025-11-21 20:07:39,523 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-21 21:08:27] 2025-11-21 20:07:39,529 | INFO     | ***************************************
[2025-11-21 21:08:27] 2025-11-21 20:07:39,530 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-21 21:08:27] 2025-11-21 20:07:39,530 | INFO     | ***************************************
[2025-11-21 21:08:27] 2025-11-21 20:07:39,530 | INFO     | 
[2025-11-21 21:08:27] 2025-11-21 20:07:39,530 | INFO     | pilot is running in a VM
[2025-11-21 21:08:27] 2025-11-21 20:07:39,531 | INFO     | architecture information:
[2025-11-21 21:08:27] 2025-11-21 20:07:39,531 | INFO     | executing command: cat /etc/os-release
[2025-11-21 21:08:27] 2025-11-21 20:07:39,559 | INFO     | cat /etc/os-release:
[2025-11-21 21:08:27] NAME="CentOS Linux"
[2025-11-21 21:08:27] VERSION="7 (Core)"
[2025-11-21 21:08:27] ID="centos"
[2025-11-21 21:08:27] ID_LIKE="rhel fedora"
[2025-11-21 21:08:27] VERSION_ID="7"
[2025-11-21 21:08:27] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-21 21:08:27] ANSI_COLOR="0;31"
[2025-11-21 21:08:27] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-21 21:08:27] HOME_URL="https://www.centos.org/"
[2025-11-21 21:08:27] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-21 21:08:27] 
[2025-11-21 21:08:27] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-21 21:08:27] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-21 21:08:27] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-21 21:08:27] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-21 21:08:27] 
[2025-11-21 21:08:27] 2025-11-21 20:07:39,559 | INFO     | ***************************************
[2025-11-21 21:08:27] 2025-11-21 20:07:40,063 | INFO     | executing command: df -mP /var/lib/boinc/slots/7
[2025-11-21 21:08:27] 2025-11-21 20:07:40,121 | INFO     | sufficient remaining disk space (495172190208 B)
[2025-11-21 21:08:27] 2025-11-21 20:07:40,122 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-21 21:08:27] 2025-11-21 20:07:40,122 | INFO     | current server update state: UPDATING_FINAL
[2025-11-21 21:08:27] 2025-11-21 20:07:40,122 | INFO     | update_server=False
[2025-11-21 21:08:27] 2025-11-21 20:07:40,122 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-21 21:08:27] 2025-11-21 20:07:40,123 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-21 21:08:27] 2025-11-21 20:07:40,124 | INFO     | aborting loop
[2025-11-21 21:08:27] 2025-11-21 20:07:40,128 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-21 21:08:27] 2025-11-21 20:07:40,128 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-11-21 21:08:27] 2025-11-21 20:07:40,129 | INFO     | found 0 job(s) in 20 queues
[2025-11-21 21:08:27] 2025-11-21 20:07:40,129 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-21 21:08:27] 2025-11-21 20:07:40,129 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-21 21:08:27] 2025-11-21 20:07:40,130 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-21 21:08:27] 2025-11-21 20:07:40,257 | INFO     | all data control threads have been joined
[2025-11-21 21:08:27] 2025-11-21 20:07:40,535 | INFO     | all payload control threads have been joined
[2025-11-21 21:08:27] 2025-11-21 20:07:41,129 | INFO     | [job] retrieve thread has finished
[2025-11-21 21:08:27] 2025-11-21 20:07:41,129 | INFO     | [job] job monitor thread has finished
[2025-11-21 21:08:27] 2025-11-21 20:07:41,133 | INFO     | [job] queue monitor thread has finished
[2025-11-21 21:08:27] 2025-11-21 20:07:41,262 | INFO     | [data] control thread has finished
[2025-11-21 21:08:27] 2025-11-21 20:07:41,301 | INFO     | [job] validate thread has finished
[2025-11-21 21:08:27] 2025-11-21 20:07:41,324 | INFO     | [job] create_data_payload thread has finished
[2025-11-21 21:08:27] 2025-11-21 20:07:41,339 | INFO     | all job control threads have been joined
[2025-11-21 21:08:27] 2025-11-21 20:07:41,493 | INFO     | [payload] failed_post thread has finished
[2025-11-21 21:08:27] 2025-11-21 20:07:41,541 | INFO     | [payload] control thread has finished
[2025-11-21 21:08:27] 2025-11-21 20:07:41,801 | INFO     | [payload] execute_payloads thread has finished
[2025-11-21 21:08:27] 2025-11-21 20:07:41,802 | INFO     | [data] copytool_in thread has finished
[2025-11-21 21:08:27] 2025-11-21 20:07:41,941 | INFO     | [payload] validate_pre thread has finished
[2025-11-21 21:08:27] 2025-11-21 20:07:41,958 | INFO     | [payload] validate_post thread has finished
[2025-11-21 21:08:27] 2025-11-21 20:07:42,137 | INFO     | [data] copytool_out thread has finished
[2025-11-21 21:08:27] 2025-11-21 20:07:42,308 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-21 21:08:27] 2025-11-21 20:07:42,345 | INFO     | [job] control thread has finished
[2025-11-21 21:08:27] 2025-11-21 20:07:42,689 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-21 21:08:27] 2025-11-21 20:07:46,696 | INFO     | [data] queue_monitor thread has finished
[2025-11-21 21:08:27] 2025-11-21 20:08:20,178 | INFO     | [monitor] cgroup control has ended
[2025-11-21 21:08:27] 2025-11-21 20:08:22,282 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140038488930112)>', '<ExcThread(monitor, started 140038046201600)>']
[2025-11-21 21:08:27] 2025-11-21 20:08:22,343 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-21 21:08:27] 2025-11-21 20:08:22,344 | INFO     | [monitor] control thread has ended
[2025-11-21 21:08:27] 2025-11-21 20:08:27,307 | INFO     | all workflow threads have been joined
[2025-11-21 21:08:27] 2025-11-21 20:08:27,308 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-21 21:08:27] 2025-11-21 20:08:27,308 | INFO     | traces error code: 0
[2025-11-21 21:08:27] 2025-11-21 20:08:27,308 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-21 21:08:27] 2025-11-21 20:08:27,548 [wrapper] ==== pilot stdout END ====
[2025-11-21 21:08:27] 2025-11-21 20:08:27,561 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-21 21:08:27] 2025-11-21 20:08:27,567 [wrapper] pilotpid: 21144
[2025-11-21 21:08:27] 2025-11-21 20:08:27,572 [wrapper] Pilot exit status: 0
[2025-11-21 21:08:27] 2025-11-21 20:08:27,599 [wrapper] pandaids: 6891561729
[2025-11-21 21:08:27] 2025-11-21 20:08:27,648 [wrapper] cleanup supervisor_pilot 24289 21145
[2025-11-21 21:08:27] 2025-11-21 20:08:27,673 [wrapper] Test setup, not cleaning
[2025-11-21 21:08:27] 2025-11-21 20:08:27,677 [wrapper] apfmon messages muted
[2025-11-21 21:08:27] 2025-11-21 20:08:27,680 [wrapper] ==== wrapper stdout END ====
[2025-11-21 21:08:27] 2025-11-21 20:08:27,684 [wrapper] ==== wrapper stderr END ====
[2025-11-21 21:08:27]  *** Error codes and diagnostics ***
[2025-11-21 21:08:27]     "exeErrorCode": 0,
[2025-11-21 21:08:27]     "exeErrorDiag": "",
[2025-11-21 21:08:27]     "pilotErrorCode": 0,
[2025-11-21 21:08:27]     "pilotErrorDiag": "",
[2025-11-21 21:08:27]  *** Listing of results directory ***
[2025-11-21 21:08:27] total 1318108
[2025-11-21 21:08:27] -rw-r--r--. 1 boinc boinc    576529 Nov 18 16:15 pilot3.tar.gz
[2025-11-21 21:08:27] -rwx------. 1 boinc boinc     36292 Nov 18 16:24 runpilot2-wrapper.sh
[2025-11-21 21:08:27] -rw-r--r--. 1 boinc boinc      5112 Nov 18 16:24 queuedata.json
[2025-11-21 21:08:27] -rw-r--r--. 1 boinc boinc       100 Nov 20 19:59 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-21 21:08:27] -rwxr-xr-x. 1 boinc boinc      7986 Nov 20 19:59 run_atlas
[2025-11-21 21:08:27] -rw-r--r--. 1 boinc boinc       105 Nov 20 19:59 job.xml
[2025-11-21 21:08:27] -rw-r--r--. 2 boinc boinc 409434368 Nov 20 19:59 EVNT.47493065._000095.pool.root.1
[2025-11-21 21:08:27] -rw-r--r--. 1 boinc boinc      6391 Nov 20 19:59 init_data.xml
[2025-11-21 21:08:27] -rw-r--r--. 2 boinc boinc     15120 Nov 20 19:59 start_atlas.sh
[2025-11-21 21:08:27] drwxrwx--x. 2 boinc boinc        68 Nov 20 19:59 shared
[2025-11-21 21:08:27] -rw-r--r--. 2 boinc boinc    590094 Nov 20 19:59 input.tar.gz
[2025-11-21 21:08:27] -rw-r--r--. 1 boinc boinc         0 Nov 20 19:59 boinc_lockfile
[2025-11-21 21:08:27] -rw-r--r--. 1 boinc boinc      2768 Nov 20 19:59 pandaJob.out
[2025-11-21 21:08:27] -rw-------. 1 boinc boinc    989440 Nov 20 19:59 agis_schedconf.cvmfs.json
[2025-11-21 21:08:27] drwx------. 5 boinc boinc      4096 Nov 20 19:59 pilot3
[2025-11-21 21:08:27] -rw-r--r--. 1 boinc boinc       533 Nov 21 20:48 boinc_task_state.xml
[2025-11-21 21:08:27] -rw-------. 1 boinc boinc 907152512 Nov 21 21:06 HITS.47493068._000941.pool.root.1
[2025-11-21 21:08:27] -rw-------. 1 boinc boinc        95 Nov 21 21:07 pilot_heartbeat.json
[2025-11-21 21:08:27] -rw-------. 1 boinc boinc      1031 Nov 21 21:07 memory_monitor_summary.json
[2025-11-21 21:08:27] -rw-------. 1 boinc boinc   1526164 Nov 21 21:07 agis_ddmendpoints.agis.ALL.json
[2025-11-21 21:08:27] -rw-------. 1 boinc boinc   2550388 Nov 21 21:07 log.47493068._000941.job.log.tgz.1
[2025-11-21 21:08:27] -rw-------. 1 boinc boinc      8627 Nov 21 21:07 heartbeat.json
[2025-11-21 21:08:27] -rw-r--r--. 1 boinc boinc        29 Nov 21 21:08 wrapper_checkpoint.txt
[2025-11-21 21:08:27] -rw-r--r--. 1 boinc boinc      8192 Nov 21 21:08 boinc_mmap_file
[2025-11-21 21:08:27] -rw-------. 1 boinc boinc      4615 Nov 21 21:08 pilotlog.txt
[2025-11-21 21:08:27] -rw-------. 1 boinc boinc  12074600 Nov 21 21:08 log.47493068._000941.job.log.1
[2025-11-21 21:08:27] -rw-------. 1 boinc boinc       353 Nov 21 21:08 output.list
[2025-11-21 21:08:27] -rw-r--r--. 1 boinc boinc       620 Nov 21 21:08 runtime_log
[2025-11-21 21:08:27] -rw-------. 1 boinc boinc  14643200 Nov 21 21:08 result.tar.gz
[2025-11-21 21:08:27] -rw-r--r--. 1 boinc boinc      8703 Nov 21 21:08 runtime_log.err
[2025-11-21 21:08:27] -rw-------. 1 boinc boinc       662 Nov 21 21:08 QpaNDmckcf8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmnNFKDmMLSgjm.diag
[2025-11-21 21:08:27] -rw-r--r--. 1 boinc boinc     21453 Nov 21 21:08 stderr.txt
[2025-11-21 21:08:27] HITS file was successfully produced:
[2025-11-21 21:08:27] -rw-------. 1 boinc boinc 907152512 Nov 21 21:06 shared/HITS.pool.root.1
[2025-11-21 21:08:27]  *** Contents of shared directory: ***
[2025-11-21 21:08:27] total 1300628
[2025-11-21 21:08:27] -rw-r--r--. 2 boinc boinc 409434368 Nov 20 19:59 ATLAS.root_0
[2025-11-21 21:08:27] -rw-r--r--. 2 boinc boinc     15120 Nov 20 19:59 start_atlas.sh
[2025-11-21 21:08:27] -rw-r--r--. 2 boinc boinc    590094 Nov 20 19:59 input.tar.gz
[2025-11-21 21:08:27] -rw-------. 1 boinc boinc 907152512 Nov 21 21:06 HITS.pool.root.1
[2025-11-21 21:08:27] -rw-------. 1 boinc boinc  14643200 Nov 21 21:08 result.tar.gz
21:08:29 (13075): run_atlas exited; CPU time 333527.777568
21:08:29 (13075): called boinc_finish(0)

</stderr_txt>
]]>

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