Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
18:33:54 (2837): wrapper (7.7.26015): starting
18:33:54 (2837): wrapper: running run_atlas (--nthreads 8)
[2025-11-19 18:33:54] Arguments: --nthreads 8
[2025-11-19 18:33:54] Threads: 8
[2025-11-19 18:33:54] Checking for CVMFS
[2025-11-19 18:33:55] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-19 18:33:56] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-19 18:33:56] Running cvmfs_config stat atlas.cern.ch
[2025-11-19 18:33:58] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-19 18:33:58] 2.11.2.0 17816 180577 136260 153052 1 128 13695312 25165825 4251 130560 3 62193002 99.876 31428168 2850 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-11-19 18:33:58] CVMFS is ok
[2025-11-19 18:33:58] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-19 18:33:58] Checking for apptainer binary...
[2025-11-19 18:33:58] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-19 18:33:58] Running /usr/bin/apptainer --version
[2025-11-19 18:33:58] apptainer version 1.3.2-1.el7
[2025-11-19 18:33:58] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-19 18:34:06] cg-vwn410.simple-grid.lan
[2025-11-19 18:34:06] apptainer works
[2025-11-19 18:34:06] Set ATHENA_PROC_NUMBER=8
[2025-11-19 18:34:06] Set ATHENA_CORE_NUMBER=8
[2025-11-19 18:34:06] Starting ATLAS job with PandaID=6891561610
[2025-11-19 18:34:06] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/8 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-20 20:02:20]  *** The last 200 lines of the pilot log: ***
[2025-11-20 20:02:20] 2025-11-20 19:01:45,336 | INFO     | mean x: 1763619821.9040267
[2025-11-20 20:02:20] 2025-11-20 19:01:45,336 | INFO     | mean y: 2856726.8
[2025-11-20 20:02:20] 2025-11-20 19:01:45,336 | INFO     | intersect: -7909277300.420456
[2025-11-20 20:02:20] 2025-11-20 19:01:45,338 | INFO     | chi2: 14.872700902017332
[2025-11-20 20:02:20] 2025-11-20 19:01:45,340 | INFO     | sum of square deviations: 1015450106906.8861
[2025-11-20 20:02:20] 2025-11-20 19:01:45,404 | INFO     | sum of deviations: 5079841920363.877
[2025-11-20 20:02:20] 2025-11-20 19:01:45,404 | INFO     | mean x: 1763619669.408754
[2025-11-20 20:02:20] 2025-11-20 19:01:45,404 | INFO     | mean y: 2863811.6855218858
[2025-11-20 20:02:20] 2025-11-20 19:01:45,405 | INFO     | intersect: -8819735218.344791
[2025-11-20 20:02:20] 2025-11-20 19:01:45,407 | INFO     | chi2: 12.0295149457679
[2025-11-20 20:02:20] 2025-11-20 19:01:45,407 | INFO     | current chi2=12.0295149457679 (change=19.11680988530995 %)
[2025-11-20 20:02:20] 2025-11-20 19:01:45,407 | INFO     | right removable region: 1484
[2025-11-20 20:02:20] 2025-11-20 19:01:45,410 | INFO     | sum of square deviations: 1015448830786.8865
[2025-11-20 20:02:20] 2025-11-20 19:01:45,480 | INFO     | sum of deviations: 3966548140306.3633
[2025-11-20 20:02:20] 2025-11-20 19:01:45,480 | INFO     | mean x: 1763619974.408754
[2025-11-20 20:02:20] 2025-11-20 19:01:45,481 | INFO     | mean y: 2866138.8956228956
[2025-11-20 20:02:20] 2025-11-20 19:01:45,481 | INFO     | intersect: -6886189535.408807
[2025-11-20 20:02:20] 2025-11-20 19:01:45,483 | INFO     | chi2: 9.971453323660686
[2025-11-20 20:02:20] 2025-11-20 19:01:45,483 | INFO     | current chi2=9.971453323660686 (change=32.95465706361271 %)
[2025-11-20 20:02:20] 2025-11-20 19:01:45,485 | INFO     | sum of square deviations: 1005225638256.9302
[2025-11-20 20:02:20] 2025-11-20 19:01:45,549 | INFO     | sum of deviations: 3428711893044.253
[2025-11-20 20:02:20] 2025-11-20 19:01:45,550 | INFO     | mean x: 1763620126.9135134
[2025-11-20 20:02:20] 2025-11-20 19:01:45,550 | INFO     | mean y: 2874162.0878378376
[2025-11-20 20:02:20] 2025-11-20 19:01:45,550 | INFO     | intersect: -6012636260.47364
[2025-11-20 20:02:20] 2025-11-20 19:01:45,552 | INFO     | chi2: 6.585301919770227
[2025-11-20 20:02:20] 2025-11-20 19:01:45,553 | INFO     | current chi2=6.585301919770227 (change=33.958454138833055 %)
[2025-11-20 20:02:20] 2025-11-20 19:01:45,555 | INFO     | sum of square deviations: 995071284226.906
[2025-11-20 20:02:20] 2025-11-20 19:01:45,622 | INFO     | sum of deviations: 3013560784893.3013
[2025-11-20 20:02:20] 2025-11-20 19:01:45,623 | INFO     | mean x: 1763620279.4183052
[2025-11-20 20:02:20] 2025-11-20 19:01:45,623 | INFO     | mean y: 2880394.9444067795
[2025-11-20 20:02:20] 2025-11-20 19:01:45,623 | INFO     | intersect: -5338221290.6767845
[2025-11-20 20:02:20] 2025-11-20 19:01:45,625 | INFO     | chi2: 4.602377976612972
[2025-11-20 20:02:20] 2025-11-20 19:01:45,626 | INFO     | current chi2=4.602377976612972 (change=30.11135962049319 %)
[2025-11-20 20:02:20] 2025-11-20 19:01:45,628 | INFO     | sum of square deviations: 984986255943.0405
[2025-11-20 20:02:20] 2025-11-20 19:01:45,667 | INFO     | time since job start (91412s) is within the limit (172800.0s)
[2025-11-20 20:02:20] 2025-11-20 19:01:45,691 | INFO     | sum of deviations: 2907752699836.6167
[2025-11-20 20:02:20] 2025-11-20 19:01:45,692 | INFO     | mean x: 1763620431.9176872
[2025-11-20 20:02:20] 2025-11-20 19:01:45,692 | INFO     | mean y: 2881994.6993197277
[2025-11-20 20:02:20] 2025-11-20 19:01:45,692 | INFO     | intersect: -5203456714.550879
[2025-11-20 20:02:20] 2025-11-20 19:01:45,694 | INFO     | chi2: 4.534004326563816
[2025-11-20 20:02:20] 2025-11-20 19:01:45,695 | INFO     | current chi2=4.534004326563816 (change=1.4856157055460772 %)
[2025-11-20 20:02:20] 2025-11-20 19:01:45,695 | INFO     | left removable region: 40
[2025-11-20 20:02:20] 2025-11-20 19:01:45,697 | INFO     | sum of square deviations: 933641425138.4675
[2025-11-20 20:02:20] 2025-11-20 19:01:45,758 | INFO     | sum of deviations: 3256455104182.6504
[2025-11-20 20:02:20] 2025-11-20 19:01:45,759 | INFO     | mean x: 1763620858.9231303
[2025-11-20 20:02:20] 2025-11-20 19:01:45,759 | INFO     | mean y: 2894801.474376731
[2025-11-20 20:02:20] 2025-11-20 19:01:45,759 | INFO     | intersect: -6148451950.3382435
[2025-11-20 20:02:20] 2025-11-20 19:01:45,761 | INFO     | chi2: 0.7684923097248103
[2025-11-20 20:02:20] 2025-11-20 19:01:45,762 | INFO     | current memory leak: 3.49 B/s (using 1444 data points, chi2=0.77)
[2025-11-20 20:02:20] 2025-11-20 19:01:45,764 | INFO     | could have reported an average CPU frequency of 1999 MHz (50 samples)
[2025-11-20 20:02:20] 2025-11-20 19:01:45,765 | INFO     | ..............................
[2025-11-20 20:02:20] 2025-11-20 19:01:45,765 | INFO     | . Timing measurements:
[2025-11-20 20:02:20] 2025-11-20 19:01:45,765 | INFO     | . get job = 0 s
[2025-11-20 20:02:20] 2025-11-20 19:01:45,765 | INFO     | . initial setup = 16 s
[2025-11-20 20:02:20] 2025-11-20 19:01:45,765 | INFO     | . payload setup = 155 s
[2025-11-20 20:02:20] 2025-11-20 19:01:45,765 | INFO     | . stage-in = 0 s
[2025-11-20 20:02:20] 2025-11-20 19:01:45,765 | INFO     | . payload execution = 91041 s
[2025-11-20 20:02:20] 2025-11-20 19:01:45,765 | INFO     | . stage-out = 3 s
[2025-11-20 20:02:20] 2025-11-20 19:01:45,765 | INFO     | . log creation = 1 s
[2025-11-20 20:02:20] 2025-11-20 19:01:45,766 | INFO     | ..............................
[2025-11-20 20:02:20] 2025-11-20 19:01:46,138 | INFO     | 
[2025-11-20 20:02:20] 2025-11-20 19:01:46,138 | INFO     | job summary report
[2025-11-20 20:02:20] 2025-11-20 19:01:46,138 | INFO     | --------------------------------------------------
[2025-11-20 20:02:20] 2025-11-20 19:01:46,138 | INFO     | PanDA job id: 6891561610
[2025-11-20 20:02:20] 2025-11-20 19:01:46,139 | INFO     | task id: 47493068
[2025-11-20 20:02:20] 2025-11-20 19:01:46,139 | INFO     | errors: (none)
[2025-11-20 20:02:20] 2025-11-20 19:01:46,139 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-20 20:02:20] 2025-11-20 19:01:46,139 | INFO     | pilot state: finished 
[2025-11-20 20:02:20] 2025-11-20 19:01:46,139 | INFO     | transexitcode: 0
[2025-11-20 20:02:20] 2025-11-20 19:01:46,139 | INFO     | exeerrorcode: 0
[2025-11-20 20:02:20] 2025-11-20 19:01:46,139 | INFO     | exeerrordiag: 
[2025-11-20 20:02:20] 2025-11-20 19:01:46,139 | INFO     | exitcode: 0
[2025-11-20 20:02:20] 2025-11-20 19:01:46,139 | INFO     | exitmsg: OK
[2025-11-20 20:02:20] 2025-11-20 19:01:46,139 | INFO     | cpuconsumptiontime: 337039 s
[2025-11-20 20:02:20] 2025-11-20 19:01:46,140 | INFO     | nevents: 1000
[2025-11-20 20:02:20] 2025-11-20 19:01:46,140 | INFO     | neventsw: 0
[2025-11-20 20:02:20] 2025-11-20 19:01:46,140 | INFO     | pid: 13170
[2025-11-20 20:02:20] 2025-11-20 19:01:46,140 | INFO     | pgrp: 13170
[2025-11-20 20:02:20] 2025-11-20 19:01:46,140 | INFO     | corecount: 8
[2025-11-20 20:02:20] 2025-11-20 19:01:46,140 | INFO     | event service: False
[2025-11-20 20:02:20] 2025-11-20 19:01:46,140 | INFO     | sizes: {0: 2297019, 1: 2297218, 2: 2297218, 12: 2297246, 23: 2297274, 34: 2297302, 45: 2297458, 55: 2297486, 66: 2297514, 77: 2297542, 88: 2297598, 98: 2297906, 10
[2025-11-20 20:02:20] 2025-11-20 19:01:46,140 | INFO     | --------------------------------------------------
[2025-11-20 20:02:20] 2025-11-20 19:01:46,140 | INFO     | 
[2025-11-20 20:02:20] 2025-11-20 19:01:46,140 | INFO     | executing command: ls -lF /var/lib/boinc/slots/8
[2025-11-20 20:02:20] 2025-11-20 19:01:46,267 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-20 20:02:20] 2025-11-20 19:01:46,267 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-20 20:02:20] 2025-11-20 19:01:46,267 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-20 20:02:20] 2025-11-20 19:01:46,267 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-20 20:02:20] 2025-11-20 19:01:46,267 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-20 20:02:20] 2025-11-20 19:01:46,268 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-20 20:02:20] 2025-11-20 19:01:46,268 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-20 20:02:20] 2025-11-20 19:01:46,268 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-20 20:02:20] 2025-11-20 19:01:46,268 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-20 20:02:20] 2025-11-20 19:01:46,268 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-20 20:02:20] 2025-11-20 19:01:46,268 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-20 20:02:20] 2025-11-20 19:01:46,268 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-20 20:02:20] 2025-11-20 19:01:46,268 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-20 20:02:20] 2025-11-20 19:01:46,268 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-20 20:02:20] 2025-11-20 19:01:46,268 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-20 20:02:20] 2025-11-20 19:01:46,269 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-20 20:02:20] 2025-11-20 19:01:46,269 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-20 20:02:20] 2025-11-20 19:01:46,269 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-20 20:02:20] 2025-11-20 19:01:46,269 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-20 20:02:20] 2025-11-20 19:01:46,269 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-20 20:02:20] 2025-11-20 19:01:46,269 | INFO     | job 6891561610 has completed (purged errors)
[2025-11-20 20:02:20] 2025-11-20 19:01:46,269 | INFO     | overall cleanup function is called
[2025-11-20 20:02:20] 2025-11-20 19:01:46,795 | INFO     | PID=6585 has CPU usage=17.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-20 20:02:20] 2025-11-20 19:01:46,796 | INFO     | .. there are 9 such processes running
[2025-11-20 20:02:20] 2025-11-20 19:01:47,288 | INFO     | --- collectZombieJob: --- 10, [13170]
[2025-11-20 20:02:20] 2025-11-20 19:01:47,288 | INFO     | zombie collector waiting for pid 13170
[2025-11-20 20:02:20] 2025-11-20 19:01:47,288 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-20 20:02:20] 2025-11-20 19:01:47,289 | INFO     | collected zombie processes
[2025-11-20 20:02:20] 2025-11-20 19:01:47,289 | INFO     | will attempt to kill all subprocesses of pid=13170
[2025-11-20 20:02:20] 2025-11-20 19:01:47,384 | INFO     | process IDs to be killed: [13170] (in reverse order)
[2025-11-20 20:02:20] 2025-11-20 19:01:47,456 | WARNING  | found no corresponding commands to process id(s)
[2025-11-20 20:02:20] 2025-11-20 19:01:47,456 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-20 20:02:20] 2025-11-20 19:01:47,460 | INFO     | did not find any defunct processes belonging to 13170
[2025-11-20 20:02:20] 2025-11-20 19:01:47,463 | INFO     | did not find any defunct processes belonging to 13170
[2025-11-20 20:02:20] 2025-11-20 19:01:47,465 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-20 20:02:20] 2025-11-20 19:01:47,465 | INFO     | ready for new job
[2025-11-20 20:02:20] 2025-11-20 19:01:47,465 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-20 20:02:20] 2025-11-20 19:01:47,472 | INFO     | ***************************************
[2025-11-20 20:02:20] 2025-11-20 19:01:47,473 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-20 20:02:20] 2025-11-20 19:01:47,473 | INFO     | ***************************************
[2025-11-20 20:02:20] 2025-11-20 19:01:47,473 | INFO     | 
[2025-11-20 20:02:20] 2025-11-20 19:01:47,473 | INFO     | pilot is running in a VM
[2025-11-20 20:02:20] 2025-11-20 19:01:47,474 | INFO     | architecture information:
[2025-11-20 20:02:20] 2025-11-20 19:01:47,474 | INFO     | executing command: cat /etc/os-release
[2025-11-20 20:02:20] 2025-11-20 19:01:47,496 | INFO     | cat /etc/os-release:
[2025-11-20 20:02:20] NAME="CentOS Linux"
[2025-11-20 20:02:20] VERSION="7 (Core)"
[2025-11-20 20:02:20] ID="centos"
[2025-11-20 20:02:20] ID_LIKE="rhel fedora"
[2025-11-20 20:02:20] VERSION_ID="7"
[2025-11-20 20:02:20] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-20 20:02:20] ANSI_COLOR="0;31"
[2025-11-20 20:02:20] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-20 20:02:20] HOME_URL="https://www.centos.org/"
[2025-11-20 20:02:20] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-20 20:02:20] 
[2025-11-20 20:02:20] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-20 20:02:20] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-20 20:02:20] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-20 20:02:20] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-20 20:02:20] 
[2025-11-20 20:02:20] 2025-11-20 19:01:47,497 | INFO     | ***************************************
[2025-11-20 20:02:20] 2025-11-20 19:01:47,998 | INFO     | executing command: df -mP /var/lib/boinc/slots/8
[2025-11-20 20:02:20] 2025-11-20 19:01:48,022 | INFO     | sufficient remaining disk space (494796800000 B)
[2025-11-20 20:02:20] 2025-11-20 19:01:48,022 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-20 20:02:20] 2025-11-20 19:01:48,023 | INFO     | current server update state: UPDATING_FINAL
[2025-11-20 20:02:20] 2025-11-20 19:01:48,023 | INFO     | update_server=False
[2025-11-20 20:02:20] 2025-11-20 19:01:48,023 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-20 20:02:20] 2025-11-20 19:01:48,024 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-20 20:02:20] 2025-11-20 19:01:48,024 | INFO     | aborting loop
[2025-11-20 20:02:20] 2025-11-20 19:01:48,862 | INFO     | all data control threads have been joined
[2025-11-20 20:02:20] 2025-11-20 19:01:49,024 | INFO     | [job] retrieve thread has finished
[2025-11-20 20:02:20] 2025-11-20 19:01:49,029 | INFO     | [job] job monitor thread has finished
[2025-11-20 20:02:20] 2025-11-20 19:01:49,072 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-20 20:02:20] 2025-11-20 19:01:49,098 | INFO     | all job control threads have been joined
[2025-11-20 20:02:20] 2025-11-20 19:01:49,237 | INFO     | all payload control threads have been joined
[2025-11-20 20:02:20] 2025-11-20 19:01:49,269 | INFO     | [payload] validate_pre thread has finished
[2025-11-20 20:02:20] 2025-11-20 19:01:49,427 | INFO     | [payload] validate_post thread has finished
[2025-11-20 20:02:20] 2025-11-20 19:01:49,449 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-20 20:02:20] 2025-11-20 19:01:49,597 | INFO     | [payload] execute_payloads thread has finished
[2025-11-20 20:02:20] 2025-11-20 19:01:49,867 | INFO     | [data] control thread has finished
[2025-11-20 20:02:20] 2025-11-20 19:01:50,013 | INFO     | [job] validate thread has finished
[2025-11-20 20:02:20] 2025-11-20 19:01:50,104 | INFO     | [job] control thread has finished
[2025-11-20 20:02:20] 2025-11-20 19:01:50,242 | INFO     | [payload] control thread has finished
[2025-11-20 20:02:20] 2025-11-20 19:01:50,357 | INFO     | [payload] failed_post thread has finished
[2025-11-20 20:02:20] 2025-11-20 19:01:50,390 | INFO     | [job] create_data_payload thread has finished
[2025-11-20 20:02:20] 2025-11-20 19:01:50,435 | INFO     | [data] copytool_in thread has finished
[2025-11-20 20:02:20] 2025-11-20 19:01:50,921 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-20 20:02:20] 2025-11-20 19:01:51,271 | INFO     | [monitor] cgroup control has ended
[2025-11-20 20:02:20] 2025-11-20 19:01:51,456 | INFO     | [data] copytool_out thread has finished
[2025-11-20 20:02:20] 2025-11-20 19:01:51,927 | INFO     | [job] queue monitor thread has finished
[2025-11-20 20:02:20] 2025-11-20 19:01:53,080 | INFO     | [data] queue_monitor thread has finished
[2025-11-20 20:02:20] 2025-11-20 19:01:58,291 | INFO     | job.realtimelogging is not enabled
[2025-11-20 20:02:20] 2025-11-20 19:01:59,292 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-20 20:02:20] 2025-11-20 19:02:01,211 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139774063380288)>', '<ExcThread(monitor, started 139773326911232)>']
[2025-11-20 20:02:20] 2025-11-20 19:02:06,237 | INFO     | all workflow threads have been joined
[2025-11-20 20:02:20] 2025-11-20 19:02:06,237 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-20 20:02:20] 2025-11-20 19:02:06,238 | INFO     | traces error code: 0
[2025-11-20 20:02:20] 2025-11-20 19:02:06,238 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-20 20:02:20] 2025-11-20 19:02:19,011 | INFO     | PID=6585 has CPU usage=1.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-11-20 20:02:20] 2025-11-20 19:02:19,012 | INFO     | .. there are 8 such processes running
[2025-11-20 20:02:20] 2025-11-20 19:02:19,012 | INFO     | found 0 job(s) in 20 queues
[2025-11-20 20:02:20] 2025-11-20 19:02:19,012 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-20 20:02:20] 2025-11-20 19:02:19,012 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-20 20:02:20] 2025-11-20 19:02:19,013 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-20 20:02:20] 2025-11-20 19:02:19,013 | INFO     | [monitor] control thread has ended
[2025-11-20 20:02:20] 2025-11-20 19:02:19,308 [wrapper] ==== pilot stdout END ====
[2025-11-20 20:02:20] 2025-11-20 19:02:19,362 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-20 20:02:20] 2025-11-20 19:02:19,420 [wrapper] pilotpid: 6585
[2025-11-20 20:02:20] 2025-11-20 19:02:19,469 [wrapper] Pilot exit status: 0
[2025-11-20 20:02:20] 2025-11-20 19:02:19,762 [wrapper] pandaids: 6891561610
[2025-11-20 20:02:20] 2025-11-20 19:02:20,177 [wrapper] cleanup supervisor_pilot 15154 6586
[2025-11-20 20:02:20] 2025-11-20 19:02:20,218 [wrapper] Test setup, not cleaning
[2025-11-20 20:02:20] 2025-11-20 19:02:20,260 [wrapper] apfmon messages muted
[2025-11-20 20:02:20] 2025-11-20 19:02:20,271 [wrapper] ==== wrapper stdout END ====
[2025-11-20 20:02:20] 2025-11-20 19:02:20,334 [wrapper] ==== wrapper stderr END ====
[2025-11-20 20:02:20]  *** Error codes and diagnostics ***
[2025-11-20 20:02:20]     "exeErrorCode": 0,
[2025-11-20 20:02:20]     "exeErrorDiag": "",
[2025-11-20 20:02:20]     "pilotErrorCode": 0,
[2025-11-20 20:02:20]     "pilotErrorDiag": "",
[2025-11-20 20:02:20]  *** Listing of results directory ***
[2025-11-20 20:02:20] total 1328368
[2025-11-20 20:02:20] -rw-r--r--. 1 boinc boinc    576529 Nov 18 16:15 pilot3.tar.gz
[2025-11-20 20:02:20] -rwx------. 1 boinc boinc     36292 Nov 18 16:24 runpilot2-wrapper.sh
[2025-11-20 20:02:20] -rw-r--r--. 1 boinc boinc      5112 Nov 18 16:24 queuedata.json
[2025-11-20 20:02:20] -rw-r--r--. 1 boinc boinc       100 Nov 19 18:33 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-20 20:02:20] -rwxr-xr-x. 1 boinc boinc      7986 Nov 19 18:33 run_atlas
[2025-11-20 20:02:20] -rw-r--r--. 1 boinc boinc       105 Nov 19 18:33 job.xml
[2025-11-20 20:02:20] -rw-r--r--. 1 boinc boinc      6389 Nov 19 18:33 init_data.xml
[2025-11-20 20:02:20] -rw-r--r--. 2 boinc boinc 408950908 Nov 19 18:33 EVNT.47493065._000089.pool.root.1
[2025-11-20 20:02:20] -rw-r--r--. 2 boinc boinc     15120 Nov 19 18:33 start_atlas.sh
[2025-11-20 20:02:20] drwxrwx--x. 2 boinc boinc        68 Nov 19 18:33 shared
[2025-11-20 20:02:20] -rw-r--r--. 2 boinc boinc    590092 Nov 19 18:33 input.tar.gz
[2025-11-20 20:02:20] -rw-r--r--. 1 boinc boinc         0 Nov 19 18:33 boinc_lockfile
[2025-11-20 20:02:20] -rw-r--r--. 1 boinc boinc      2768 Nov 19 18:34 pandaJob.out
[2025-11-20 20:02:20] -rw-------. 1 boinc boinc    989434 Nov 19 18:37 agis_schedconf.cvmfs.json
[2025-11-20 20:02:20] drwx------. 5 boinc boinc      4096 Nov 19 18:38 pilot3
[2025-11-20 20:02:20] -rw-r--r--. 1 boinc boinc       533 Nov 20 19:47 boinc_task_state.xml
[2025-11-20 20:02:20] -rw-------. 1 boinc boinc 917919472 Nov 20 20:00 HITS.47493068._000881.pool.root.1
[2025-11-20 20:02:20] -rw-------. 1 boinc boinc      1033 Nov 20 20:01 memory_monitor_summary.json
[2025-11-20 20:02:20] -rw-------. 1 boinc boinc   1526164 Nov 20 20:01 agis_ddmendpoints.agis.ALL.json
[2025-11-20 20:02:20] -rw-------. 1 boinc boinc   2567707 Nov 20 20:01 log.47493068._000881.job.log.tgz.1
[2025-11-20 20:02:20] -rw-------. 1 boinc boinc        95 Nov 20 20:01 pilot_heartbeat.json
[2025-11-20 20:02:20] -rw-------. 1 boinc boinc      8625 Nov 20 20:01 heartbeat.json
[2025-11-20 20:02:20] -rw-r--r--. 1 boinc boinc        29 Nov 20 20:02 wrapper_checkpoint.txt
[2025-11-20 20:02:20] -rw-r--r--. 1 boinc boinc      8192 Nov 20 20:02 boinc_mmap_file
[2025-11-20 20:02:20] -rw-------. 1 boinc boinc       819 Nov 20 20:02 pilotlog.txt
[2025-11-20 20:02:20] -rw-------. 1 boinc boinc  12169061 Nov 20 20:02 log.47493068._000881.job.log.1
[2025-11-20 20:02:20] -rw-------. 1 boinc boinc       353 Nov 20 20:02 output.list
[2025-11-20 20:02:20] -rw-r--r--. 1 boinc boinc       620 Nov 20 20:02 runtime_log
[2025-11-20 20:02:20] -rw-------. 1 boinc boinc  14755840 Nov 20 20:02 result.tar.gz
[2025-11-20 20:02:20] -rw-r--r--. 1 boinc boinc      8703 Nov 20 20:02 runtime_log.err
[2025-11-20 20:02:20] -rw-------. 1 boinc boinc       662 Nov 20 20:02 eUBNDmUkcf8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm7LFKDmq0EUVn.diag
[2025-11-20 20:02:20] -rw-r--r--. 1 boinc boinc     20965 Nov 20 20:02 stderr.txt
[2025-11-20 20:02:20] HITS file was successfully produced:
[2025-11-20 20:02:20] -rw-------. 1 boinc boinc 917919472 Nov 20 20:00 shared/HITS.pool.root.1
[2025-11-20 20:02:20]  *** Contents of shared directory: ***
[2025-11-20 20:02:20] total 1310784
[2025-11-20 20:02:20] -rw-r--r--. 2 boinc boinc 408950908 Nov 19 18:33 ATLAS.root_0
[2025-11-20 20:02:20] -rw-r--r--. 2 boinc boinc     15120 Nov 19 18:33 start_atlas.sh
[2025-11-20 20:02:20] -rw-r--r--. 2 boinc boinc    590092 Nov 19 18:33 input.tar.gz
[2025-11-20 20:02:20] -rw-------. 1 boinc boinc 917919472 Nov 20 20:00 HITS.pool.root.1
[2025-11-20 20:02:20] -rw-------. 1 boinc boinc  14755840 Nov 20 20:02 result.tar.gz
20:02:22 (2837): run_atlas exited; CPU time 337471.693291
20:02:22 (2837): called boinc_finish(0)

</stderr_txt>
]]>

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