Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
19:47:03 (22220): wrapper (7.7.26015): starting
19:47:03 (22220): wrapper: running run_atlas (--nthreads 8)
[2025-11-20 19:47:03] Arguments: --nthreads 8
[2025-11-20 19:47:03] Threads: 8
[2025-11-20 19:47:03] Checking for CVMFS
[2025-11-20 19:47:04] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-20 19:47:05] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-20 19:47:05] Running cvmfs_config stat atlas.cern.ch
[2025-11-20 19:47:06] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-20 19:47:06] 2.11.2.0 7908 79395 96996 153088 0 294 18415788 25165825 4188 130560 3 23214881 99.892 12434213 2006 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-11-20 19:47:06] CVMFS is ok
[2025-11-20 19:47:06] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-20 19:47:06] Checking for apptainer binary...
[2025-11-20 19:47:06] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-20 19:47:06] Running /usr/bin/apptainer --version
[2025-11-20 19:47:06] apptainer version 1.3.2-1.el7
[2025-11-20 19:47:06] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-20 19:47:08] cg-vwn301.simple-grid.lan
[2025-11-20 19:47:08] apptainer works
[2025-11-20 19:47:08] Set ATHENA_PROC_NUMBER=8
[2025-11-20 19:47:08] Set ATHENA_CORE_NUMBER=8
[2025-11-20 19:47:08] Starting ATLAS job with PandaID=6891558576
[2025-11-20 19:47:08] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/8 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-21 21:05:33]  *** The last 200 lines of the pilot log: ***
[2025-11-21 21:05:33] 2025-11-21 20:04:49,477 | INFO     | monitor loop #6041: job 0:6891558576 is in state 'finished'
[2025-11-21 21:05:33] 2025-11-21 20:04:49,477 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-21 21:05:33] 2025-11-21 20:04:49,490 | INFO     | time since job start (91033s) is within the limit (172800.0s)
[2025-11-21 21:05:33] 2025-11-21 20:04:51,499 | INFO     | time since job start (91035s) is within the limit (172800.0s)
[2025-11-21 21:05:33] 2025-11-21 20:04:51,987 | INFO     | monitor loop #6042: job 0:6891558576 is in state 'finished'
[2025-11-21 21:05:33] 2025-11-21 20:04:51,987 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-21 21:05:33] 2025-11-21 20:04:53,514 | INFO     | time since job start (91037s) is within the limit (172800.0s)
[2025-11-21 21:05:33] 2025-11-21 20:04:54,492 | INFO     | monitor loop #6043: job 0:6891558576 is in state 'finished'
[2025-11-21 21:05:33] 2025-11-21 20:04:54,492 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-21 21:05:33] 2025-11-21 20:04:55,520 | INFO     | time since job start (91039s) is within the limit (172800.0s)
[2025-11-21 21:05:33] 2025-11-21 20:04:56,998 | INFO     | monitor loop #6044: job 0:6891558576 is in state 'finished'
[2025-11-21 21:05:33] 2025-11-21 20:04:56,998 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-21 21:05:33] 2025-11-21 20:04:57,527 | INFO     | time since job start (91041s) is within the limit (172800.0s)
[2025-11-21 21:05:33] 2025-11-21 20:04:59,503 | INFO     | monitor loop #6045: job 0:6891558576 is in state 'finished'
[2025-11-21 21:05:33] 2025-11-21 20:04:59,503 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-21 21:05:33] 2025-11-21 20:04:59,535 | INFO     | time since job start (91043s) is within the limit (172800.0s)
[2025-11-21 21:05:33] 2025-11-21 20:05:00,308 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-21 21:05:33] 2025-11-21 20:05:00,309 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.9959999999996
[2025-11-21 21:05:33] 2025-11-21 20:05:00,311 | INFO     | using path: /var/lib/boinc/slots/8/PanDA_Pilot-6891558576/memory_monitor_summary.json (trf name=prmon)
[2025-11-21 21:05:33] 2025-11-21 20:05:00,312 | INFO     | extracted standard info from prmon json
[2025-11-21 21:05:33] 2025-11-21 20:05:00,312 | INFO     | extracted standard memory fields from prmon json
[2025-11-21 21:05:33] 2025-11-21 20:05:00,312 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-21 21:05:33] 2025-11-21 20:05:00,341 | INFO     | fitting pss+swap vs Time
[2025-11-21 21:05:33] 2025-11-21 20:05:00,343 | INFO     | sum of square deviations: 1029870270725.1013
[2025-11-21 21:05:33] 2025-11-21 20:05:00,410 | INFO     | sum of deviations: 1115709140317.3372
[2025-11-21 21:05:33] 2025-11-21 20:05:00,410 | INFO     | mean x: 1763709987.7399464
[2025-11-21 21:05:33] 2025-11-21 20:05:00,410 | INFO     | mean y: 2868399.6554959784
[2025-11-21 21:05:33] 2025-11-21 20:05:00,411 | INFO     | intersect: -1907845415.595211
[2025-11-21 21:05:33] 2025-11-21 20:05:00,413 | INFO     | chi2: 19.73467823482132
[2025-11-21 21:05:33] 2025-11-21 20:05:00,415 | INFO     | sum of square deviations: 1019551515902.3856
[2025-11-21 21:05:33] 2025-11-21 20:05:00,481 | INFO     | sum of deviations: 1610410125149.1936
[2025-11-21 21:05:33] 2025-11-21 20:05:00,482 | INFO     | mean x: 1763709835.2441156
[2025-11-21 21:05:33] 2025-11-21 20:05:00,482 | INFO     | mean y: 2875709.8507061196
[2025-11-21 21:05:33] 2025-11-21 20:05:00,482 | INFO     | intersect: -2782953286.7237806
[2025-11-21 21:05:33] 2025-11-21 20:05:00,484 | INFO     | chi2: 16.523355180201463
[2025-11-21 21:05:33] 2025-11-21 20:05:00,484 | INFO     | current chi2=16.523355180201463 (change=16.272487528849407 %)
[2025-11-21 21:05:33] 2025-11-21 20:05:00,484 | INFO     | right removable region: 1486
[2025-11-21 21:05:33] 2025-11-21 20:05:00,486 | INFO     | sum of square deviations: 1019550387402.3853
[2025-11-21 21:05:33] 2025-11-21 20:05:00,546 | INFO     | sum of deviations: 617353524473.3499
[2025-11-21 21:05:33] 2025-11-21 20:05:00,547 | INFO     | mean x: 1763710140.2441156
[2025-11-21 21:05:33] 2025-11-21 20:05:00,547 | INFO     | mean y: 2875761.6684599863
[2025-11-21 21:05:33] 2025-11-21 20:05:00,547 | INFO     | intersect: -1065077999.7961631
[2025-11-21 21:05:33] 2025-11-21 20:05:00,549 | INFO     | chi2: 16.841554018800828
[2025-11-21 21:05:33] 2025-11-21 20:05:00,549 | INFO     | current chi2=16.841554018800828 (change=14.660103304424041 %)
[2025-11-21 21:05:33] 2025-11-21 20:05:00,549 | INFO     | left removable region: 10
[2025-11-21 21:05:33] 2025-11-21 20:05:00,551 | INFO     | sum of square deviations: 997091579776.75
[2025-11-21 21:05:33] 2025-11-21 20:05:00,611 | INFO     | sum of deviations: 1067357373274.2489
[2025-11-21 21:05:33] 2025-11-21 20:05:00,611 | INFO     | mean x: 1763710109.75
[2025-11-21 21:05:33] 2025-11-21 20:05:00,612 | INFO     | mean y: 2887036.821815718
[2025-11-21 21:05:33] 2025-11-21 20:05:00,612 | INFO     | intersect: -1885113050.774444
[2025-11-21 21:05:33] 2025-11-21 20:05:00,614 | INFO     | chi2: 12.552372795001366
[2025-11-21 21:05:33] 2025-11-21 20:05:00,614 | INFO     | current memory leak: 1.07 B/s (using 1476 data points, chi2=12.55)
[2025-11-21 21:05:33] 2025-11-21 20:05:00,616 | INFO     | could have reported an average CPU frequency of 1999 MHz (50 samples)
[2025-11-21 21:05:33] 2025-11-21 20:05:00,617 | INFO     | ..............................
[2025-11-21 21:05:33] 2025-11-21 20:05:00,617 | INFO     | . Timing measurements:
[2025-11-21 21:05:33] 2025-11-21 20:05:00,617 | INFO     | . get job = 0 s
[2025-11-21 21:05:33] 2025-11-21 20:05:00,617 | INFO     | . initial setup = 2 s
[2025-11-21 21:05:33] 2025-11-21 20:05:00,617 | INFO     | . payload setup = 14 s
[2025-11-21 21:05:33] 2025-11-21 20:05:00,617 | INFO     | . stage-in = 0 s
[2025-11-21 21:05:33] 2025-11-21 20:05:00,617 | INFO     | . payload execution = 90986 s
[2025-11-21 21:05:33] 2025-11-21 20:05:00,617 | INFO     | . stage-out = 3 s
[2025-11-21 21:05:33] 2025-11-21 20:05:00,618 | INFO     | . log creation = 1 s
[2025-11-21 21:05:33] 2025-11-21 20:05:00,618 | INFO     | ..............................
[2025-11-21 21:05:33] 2025-11-21 20:05:00,735 | INFO     | 
[2025-11-21 21:05:33] 2025-11-21 20:05:00,735 | INFO     | job summary report
[2025-11-21 21:05:33] 2025-11-21 20:05:00,736 | INFO     | --------------------------------------------------
[2025-11-21 21:05:33] 2025-11-21 20:05:00,736 | INFO     | PanDA job id: 6891558576
[2025-11-21 21:05:33] 2025-11-21 20:05:00,736 | INFO     | task id: 47493068
[2025-11-21 21:05:33] 2025-11-21 20:05:00,736 | INFO     | errors: (none)
[2025-11-21 21:05:33] 2025-11-21 20:05:00,736 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-21 21:05:33] 2025-11-21 20:05:00,736 | INFO     | pilot state: finished 
[2025-11-21 21:05:33] 2025-11-21 20:05:00,736 | INFO     | transexitcode: 0
[2025-11-21 21:05:33] 2025-11-21 20:05:00,736 | INFO     | exeerrorcode: 0
[2025-11-21 21:05:33] 2025-11-21 20:05:00,736 | INFO     | exeerrordiag: 
[2025-11-21 21:05:33] 2025-11-21 20:05:00,736 | INFO     | exitcode: 0
[2025-11-21 21:05:33] 2025-11-21 20:05:00,736 | INFO     | exitmsg: OK
[2025-11-21 21:05:33] 2025-11-21 20:05:00,736 | INFO     | cpuconsumptiontime: 339218 s
[2025-11-21 21:05:33] 2025-11-21 20:05:00,737 | INFO     | nevents: 1000
[2025-11-21 21:05:33] 2025-11-21 20:05:00,737 | INFO     | neventsw: 0
[2025-11-21 21:05:33] 2025-11-21 20:05:00,737 | INFO     | pid: 32527
[2025-11-21 21:05:33] 2025-11-21 20:05:00,737 | INFO     | pgrp: 32527
[2025-11-21 21:05:33] 2025-11-21 20:05:00,737 | INFO     | corecount: 8
[2025-11-21 21:05:33] 2025-11-21 20:05:00,737 | INFO     | event service: False
[2025-11-21 21:05:33] 2025-11-21 20:05:00,737 | INFO     | sizes: {0: 2298621, 1: 2298820, 11: 2299082, 12: 2299110, 91005: 2363053, 91009: 2372047, 91010: 2372231, 91024: 2372477}
[2025-11-21 21:05:33] 2025-11-21 20:05:00,737 | INFO     | --------------------------------------------------
[2025-11-21 21:05:33] 2025-11-21 20:05:00,737 | INFO     | 
[2025-11-21 21:05:33] 2025-11-21 20:05:00,737 | INFO     | executing command: ls -lF /var/lib/boinc/slots/8
[2025-11-21 21:05:33] 2025-11-21 20:05:00,773 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-21 21:05:33] 2025-11-21 20:05:00,773 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-21 21:05:33] 2025-11-21 20:05:00,773 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-21 21:05:33] 2025-11-21 20:05:00,773 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-21 21:05:33] 2025-11-21 20:05:00,774 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-21 21:05:33] 2025-11-21 20:05:00,774 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-21 21:05:33] 2025-11-21 20:05:00,774 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-21 21:05:33] 2025-11-21 20:05:00,774 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-21 21:05:33] 2025-11-21 20:05:00,774 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-21 21:05:33] 2025-11-21 20:05:00,774 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-21 21:05:33] 2025-11-21 20:05:00,774 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-21 21:05:33] 2025-11-21 20:05:00,774 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-21 21:05:33] 2025-11-21 20:05:00,775 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-21 21:05:33] 2025-11-21 20:05:00,775 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-21 21:05:33] 2025-11-21 20:05:00,775 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-21 21:05:33] 2025-11-21 20:05:00,775 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-21 21:05:33] 2025-11-21 20:05:00,775 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-21 21:05:33] 2025-11-21 20:05:00,775 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-21 21:05:33] 2025-11-21 20:05:00,775 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-21 21:05:33] 2025-11-21 20:05:00,775 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-21 21:05:33] 2025-11-21 20:05:00,776 | INFO     | job 6891558576 has completed (purged errors)
[2025-11-21 21:05:33] 2025-11-21 20:05:00,776 | INFO     | overall cleanup function is called
[2025-11-21 21:05:33] 2025-11-21 20:05:01,793 | INFO     | --- collectZombieJob: --- 10, [32527]
[2025-11-21 21:05:33] 2025-11-21 20:05:01,793 | INFO     | zombie collector waiting for pid 32527
[2025-11-21 21:05:33] 2025-11-21 20:05:01,793 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-21 21:05:33] 2025-11-21 20:05:01,793 | INFO     | collected zombie processes
[2025-11-21 21:05:33] 2025-11-21 20:05:01,793 | INFO     | will attempt to kill all subprocesses of pid=32527
[2025-11-21 21:05:33] 2025-11-21 20:05:01,885 | INFO     | process IDs to be killed: [32527] (in reverse order)
[2025-11-21 21:05:33] 2025-11-21 20:05:02,083 | WARNING  | found no corresponding commands to process id(s)
[2025-11-21 21:05:33] 2025-11-21 20:05:02,083 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-21 21:05:33] 2025-11-21 20:05:02,086 | INFO     | did not find any defunct processes belonging to 32527
[2025-11-21 21:05:33] 2025-11-21 20:05:02,090 | INFO     | did not find any defunct processes belonging to 32527
[2025-11-21 21:05:33] 2025-11-21 20:05:02,091 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-21 21:05:33] 2025-11-21 20:05:02,092 | INFO     | ready for new job
[2025-11-21 21:05:33] 2025-11-21 20:05:02,092 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-21 21:05:33] 2025-11-21 20:05:02,098 | INFO     | ***************************************
[2025-11-21 21:05:33] 2025-11-21 20:05:02,099 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-21 21:05:33] 2025-11-21 20:05:02,099 | INFO     | ***************************************
[2025-11-21 21:05:33] 2025-11-21 20:05:02,099 | INFO     | 
[2025-11-21 21:05:33] 2025-11-21 20:05:02,099 | INFO     | pilot is running in a VM
[2025-11-21 21:05:33] 2025-11-21 20:05:02,100 | INFO     | architecture information:
[2025-11-21 21:05:33] 2025-11-21 20:05:02,100 | INFO     | executing command: cat /etc/os-release
[2025-11-21 21:05:33] 2025-11-21 20:05:02,134 | INFO     | cat /etc/os-release:
[2025-11-21 21:05:33] NAME="CentOS Linux"
[2025-11-21 21:05:33] VERSION="7 (Core)"
[2025-11-21 21:05:33] ID="centos"
[2025-11-21 21:05:33] ID_LIKE="rhel fedora"
[2025-11-21 21:05:33] VERSION_ID="7"
[2025-11-21 21:05:33] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-21 21:05:33] ANSI_COLOR="0;31"
[2025-11-21 21:05:33] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-21 21:05:33] HOME_URL="https://www.centos.org/"
[2025-11-21 21:05:33] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-21 21:05:33] 
[2025-11-21 21:05:33] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-21 21:05:33] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-21 21:05:33] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-21 21:05:33] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-21 21:05:33] 
[2025-11-21 21:05:33] 2025-11-21 20:05:02,134 | INFO     | ***************************************
[2025-11-21 21:05:33] 2025-11-21 20:05:02,638 | INFO     | executing command: df -mP /var/lib/boinc/slots/8
[2025-11-21 21:05:33] 2025-11-21 20:05:02,709 | INFO     | sufficient remaining disk space (495013855232 B)
[2025-11-21 21:05:33] 2025-11-21 20:05:02,710 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-21 21:05:33] 2025-11-21 20:05:02,710 | INFO     | current server update state: UPDATING_FINAL
[2025-11-21 21:05:33] 2025-11-21 20:05:02,710 | INFO     | update_server=False
[2025-11-21 21:05:33] 2025-11-21 20:05:02,710 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-21 21:05:33] 2025-11-21 20:05:02,710 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-21 21:05:33] 2025-11-21 20:05:03,018 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-21 21:05:33] 2025-11-21 20:05:03,018 | INFO     | aborting loop
[2025-11-21 21:05:33] 2025-11-21 20:05:03,317 | INFO     | all payload control threads have been joined
[2025-11-21 21:05:33] 2025-11-21 20:05:03,346 | INFO     | all data control threads have been joined
[2025-11-21 21:05:33] 2025-11-21 20:05:03,715 | INFO     | [job] retrieve thread has finished
[2025-11-21 21:05:33] 2025-11-21 20:05:03,716 | INFO     | [job] queue monitor thread has finished
[2025-11-21 21:05:33] 2025-11-21 20:05:03,725 | INFO     | [payload] validate_post thread has finished
[2025-11-21 21:05:33] 2025-11-21 20:05:03,805 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-21 21:05:33] 2025-11-21 20:05:03,938 | INFO     | [payload] execute_payloads thread has finished
[2025-11-21 21:05:33] 2025-11-21 20:05:04,023 | INFO     | [job] job monitor thread has finished
[2025-11-21 21:05:33] 2025-11-21 20:05:04,064 | INFO     | all job control threads have been joined
[2025-11-21 21:05:33] 2025-11-21 20:05:04,287 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-21 21:05:33] 2025-11-21 20:05:04,323 | INFO     | [payload] control thread has finished
[2025-11-21 21:05:33] 2025-11-21 20:05:04,352 | INFO     | [data] control thread has finished
[2025-11-21 21:05:33] 2025-11-21 20:05:04,402 | INFO     | [payload] validate_pre thread has finished
[2025-11-21 21:05:33] 2025-11-21 20:05:04,461 | INFO     | [job] validate thread has finished
[2025-11-21 21:05:33] 2025-11-21 20:05:04,601 | INFO     | [data] copytool_in thread has finished
[2025-11-21 21:05:33] 2025-11-21 20:05:04,754 | INFO     | [job] create_data_payload thread has finished
[2025-11-21 21:05:33] 2025-11-21 20:05:05,070 | INFO     | [job] control thread has finished
[2025-11-21 21:05:33] 2025-11-21 20:05:05,141 | INFO     | [payload] failed_post thread has finished
[2025-11-21 21:05:33] 2025-11-21 20:05:05,868 | INFO     | [data] copytool_out thread has finished
[2025-11-21 21:05:33] 2025-11-21 20:05:06,095 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-21 21:05:33] 2025-11-21 20:05:10,104 | INFO     | [data] queue_monitor thread has finished
[2025-11-21 21:05:33] 2025-11-21 20:05:14,763 | INFO     | [monitor] cgroup control has ended
[2025-11-21 21:05:33] 2025-11-21 20:05:16,515 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140629070190400)>', '<ExcThread(monitor, started 140627899578112)>']
[2025-11-21 21:05:33] 2025-11-21 20:05:21,535 | INFO     | all workflow threads have been joined
[2025-11-21 21:05:33] 2025-11-21 20:05:21,535 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-21 21:05:33] 2025-11-21 20:05:21,535 | INFO     | traces error code: 0
[2025-11-21 21:05:33] 2025-11-21 20:05:21,536 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-21 21:05:33] 2025-11-21 20:05:32,811 | INFO     | PID=25989 has CPU usage=2.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-21 21:05:33] 2025-11-21 20:05:32,812 | INFO     | .. there are 9 such processes running
[2025-11-21 21:05:33] 2025-11-21 20:05:32,813 | INFO     | found 0 job(s) in 20 queues
[2025-11-21 21:05:33] 2025-11-21 20:05:32,813 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-21 21:05:33] 2025-11-21 20:05:32,813 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-21 21:05:33] 2025-11-21 20:05:32,813 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-21 21:05:33] 2025-11-21 20:05:32,813 | INFO     | [monitor] control thread has ended
[2025-11-21 21:05:33] 2025-11-21 20:05:33,036 [wrapper] ==== pilot stdout END ====
[2025-11-21 21:05:33] 2025-11-21 20:05:33,043 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-21 21:05:33] 2025-11-21 20:05:33,047 [wrapper] pilotpid: 25989
[2025-11-21 21:05:33] 2025-11-21 20:05:33,051 [wrapper] Pilot exit status: 0
[2025-11-21 21:05:33] 2025-11-21 20:05:33,097 [wrapper] pandaids: 6891558576
[2025-11-21 21:05:33] 2025-11-21 20:05:33,144 [wrapper] cleanup supervisor_pilot 16672 25990
[2025-11-21 21:05:33] 2025-11-21 20:05:33,162 [wrapper] Test setup, not cleaning
[2025-11-21 21:05:33] 2025-11-21 20:05:33,169 [wrapper] apfmon messages muted
[2025-11-21 21:05:33] 2025-11-21 20:05:33,173 [wrapper] ==== wrapper stdout END ====
[2025-11-21 21:05:33] 2025-11-21 20:05:33,177 [wrapper] ==== wrapper stderr END ====
[2025-11-21 21:05:33]  *** Error codes and diagnostics ***
[2025-11-21 21:05:33]     "exeErrorCode": 0,
[2025-11-21 21:05:33]     "exeErrorDiag": "",
[2025-11-21 21:05:33]     "pilotErrorCode": 0,
[2025-11-21 21:05:33]     "pilotErrorDiag": "",
[2025-11-21 21:05:33]  *** Listing of results directory ***
[2025-11-21 21:05:33] total 1315888
[2025-11-21 21:05:33] -rw-r--r--. 1 boinc boinc    576529 Nov 18 16:15 pilot3.tar.gz
[2025-11-21 21:05:33] -rwx------. 1 boinc boinc     36292 Nov 18 16:24 runpilot2-wrapper.sh
[2025-11-21 21:05:33] -rw-r--r--. 1 boinc boinc      5112 Nov 18 16:24 queuedata.json
[2025-11-21 21:05:33] -rw-r--r--. 1 boinc boinc       100 Nov 20 19:47 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-21 21:05:33] -rwxr-xr-x. 1 boinc boinc      7986 Nov 20 19:47 run_atlas
[2025-11-21 21:05:33] -rw-r--r--. 1 boinc boinc       105 Nov 20 19:47 job.xml
[2025-11-21 21:05:33] -rw-r--r--. 2 boinc boinc 409688972 Nov 20 19:47 EVNT.47493065._000068.pool.root.1
[2025-11-21 21:05:33] -rw-r--r--. 1 boinc boinc      6390 Nov 20 19:47 init_data.xml
[2025-11-21 21:05:33] -rw-r--r--. 2 boinc boinc     15120 Nov 20 19:47 start_atlas.sh
[2025-11-21 21:05:33] drwxrwx--x. 2 boinc boinc        68 Nov 20 19:47 shared
[2025-11-21 21:05:33] -rw-r--r--. 2 boinc boinc    590094 Nov 20 19:47 input.tar.gz
[2025-11-21 21:05:33] -rw-r--r--. 1 boinc boinc         0 Nov 20 19:47 boinc_lockfile
[2025-11-21 21:05:33] -rw-r--r--. 1 boinc boinc      2771 Nov 20 19:47 pandaJob.out
[2025-11-21 21:05:33] -rw-------. 1 boinc boinc    989440 Nov 20 19:47 agis_schedconf.cvmfs.json
[2025-11-21 21:05:33] drwx------. 5 boinc boinc      4096 Nov 20 19:47 pilot3
[2025-11-21 21:05:33] -rw-r--r--. 1 boinc boinc       533 Nov 21 20:34 boinc_task_state.xml
[2025-11-21 21:05:33] -rw-------. 1 boinc boinc 904521790 Nov 21 21:03 HITS.47493068._000675.pool.root.1
[2025-11-21 21:05:33] -rw-------. 1 boinc boinc      1034 Nov 21 21:04 memory_monitor_summary.json
[2025-11-21 21:05:33] -rw-------. 1 boinc boinc   1526164 Nov 21 21:04 agis_ddmendpoints.agis.ALL.json
[2025-11-21 21:05:33] -rw-------. 1 boinc boinc   2557454 Nov 21 21:04 log.47493068._000675.job.log.tgz.1
[2025-11-21 21:05:33] -rw-------. 1 boinc boinc      8625 Nov 21 21:05 heartbeat.json
[2025-11-21 21:05:33] -rw-r--r--. 1 boinc boinc      8192 Nov 21 21:05 boinc_mmap_file
[2025-11-21 21:05:33] -rw-r--r--. 1 boinc boinc        29 Nov 21 21:05 wrapper_checkpoint.txt
[2025-11-21 21:05:33] -rw-------. 1 boinc boinc        95 Nov 21 21:05 pilot_heartbeat.json
[2025-11-21 21:05:33] -rw-------. 1 boinc boinc       820 Nov 21 21:05 pilotlog.txt
[2025-11-21 21:05:33] -rw-------. 1 boinc boinc  12118147 Nov 21 21:05 log.47493068._000675.job.log.1
[2025-11-21 21:05:33] -rw-------. 1 boinc boinc       353 Nov 21 21:05 output.list
[2025-11-21 21:05:33] -rw-r--r--. 1 boinc boinc       620 Nov 21 21:05 runtime_log
[2025-11-21 21:05:33] -rw-------. 1 boinc boinc  14694400 Nov 21 21:05 result.tar.gz
[2025-11-21 21:05:33] -rw-r--r--. 1 boinc boinc      8703 Nov 21 21:05 runtime_log.err
[2025-11-21 21:05:33] -rw-------. 1 boinc boinc       662 Nov 21 21:05 bp1LDmUkcf8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmBLFKDmpuwVLm.diag
[2025-11-21 21:05:33] -rw-r--r--. 1 boinc boinc     21408 Nov 21 21:05 stderr.txt
[2025-11-21 21:05:33] HITS file was successfully produced:
[2025-11-21 21:05:33] -rw-------. 1 boinc boinc 904521790 Nov 21 21:03 shared/HITS.pool.root.1
[2025-11-21 21:05:33]  *** Contents of shared directory: ***
[2025-11-21 21:05:33] total 1298360
[2025-11-21 21:05:33] -rw-r--r--. 2 boinc boinc 409688972 Nov 20 19:47 ATLAS.root_0
[2025-11-21 21:05:33] -rw-r--r--. 2 boinc boinc     15120 Nov 20 19:47 start_atlas.sh
[2025-11-21 21:05:33] -rw-r--r--. 2 boinc boinc    590094 Nov 20 19:47 input.tar.gz
[2025-11-21 21:05:33] -rw-------. 1 boinc boinc 904521790 Nov 21 21:03 HITS.pool.root.1
[2025-11-21 21:05:33] -rw-------. 1 boinc boinc  14694400 Nov 21 21:05 result.tar.gz
21:05:35 (22220): run_atlas exited; CPU time 339763.392712
21:05:35 (22220): called boinc_finish(0)

</stderr_txt>
]]>

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