Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
18:48:09 (20000): wrapper (7.7.26015): starting
18:48:09 (20000): wrapper: running run_atlas (--nthreads 8)
[2025-11-20 18:48:09] Arguments: --nthreads 8
[2025-11-20 18:48:09] Threads: 8
[2025-11-20 18:48:09] Checking for CVMFS
[2025-11-20 18:48:09] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-20 18:48:10] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-20 18:48:10] Running cvmfs_config stat atlas.cern.ch
[2025-11-20 18:48:10] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-20 18:48:10] 2.11.2.0 21240 276884 145112 153088 0 221 20772742 25165824 4147 130560 105 128919354 99.875 79641788 3119 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-11-20 18:48:10] CVMFS is ok
[2025-11-20 18:48:10] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-20 18:48:10] Checking for apptainer binary...
[2025-11-20 18:48:10] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-20 18:48:10] Running /usr/bin/apptainer --version
[2025-11-20 18:48:10] apptainer version 1.3.2-1.el7
[2025-11-20 18:48:10] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-20 18:48:11] cg-vwn384.simple-grid.lan
[2025-11-20 18:48:11] apptainer works
[2025-11-20 18:48:11] Set ATHENA_PROC_NUMBER=8
[2025-11-20 18:48:11] Set ATHENA_CORE_NUMBER=8
[2025-11-20 18:48:11] Starting ATLAS job with PandaID=6891561872
[2025-11-20 18:48:11] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/10 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-21 19:55:23]  *** The last 200 lines of the pilot log: ***
[2025-11-21 19:55:23] 2025-11-21 18:54:19,646 | INFO     | time since job start (90342s) is within the limit (172800.0s)
[2025-11-21 19:55:23] 2025-11-21 18:54:20,882 | INFO     | monitor loop #6020: job 0:6891561872 is in state 'finished'
[2025-11-21 19:55:23] 2025-11-21 18:54:20,882 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-21 19:55:23] 2025-11-21 18:54:21,657 | INFO     | time since job start (90344s) is within the limit (172800.0s)
[2025-11-21 19:55:23] 2025-11-21 18:54:23,402 | INFO     | monitor loop #6021: job 0:6891561872 is in state 'finished'
[2025-11-21 19:55:23] 2025-11-21 18:54:23,402 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-21 19:55:23] 2025-11-21 18:54:23,664 | INFO     | time since job start (90346s) is within the limit (172800.0s)
[2025-11-21 19:55:23] 2025-11-21 18:54:25,674 | INFO     | time since job start (90348s) is within the limit (172800.0s)
[2025-11-21 19:55:23] 2025-11-21 18:54:25,913 | INFO     | monitor loop #6022: job 0:6891561872 is in state 'finished'
[2025-11-21 19:55:23] 2025-11-21 18:54:25,914 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-21 19:55:23] 2025-11-21 18:54:27,681 | INFO     | time since job start (90350s) is within the limit (172800.0s)
[2025-11-21 19:55:23] 2025-11-21 18:54:28,418 | INFO     | monitor loop #6023: job 0:6891561872 is in state 'finished'
[2025-11-21 19:55:23] 2025-11-21 18:54:28,419 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-21 19:55:23] 2025-11-21 18:54:29,687 | INFO     | time since job start (90352s) is within the limit (172800.0s)
[2025-11-21 19:55:23] 2025-11-21 18:54:29,807 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-21 19:55:23] 2025-11-21 18:54:29,808 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2025-11-21 19:55:23] 2025-11-21 18:54:29,810 | INFO     | using path: /var/lib/boinc/slots/10/PanDA_Pilot-6891561872/memory_monitor_summary.json (trf name=prmon)
[2025-11-21 19:55:23] 2025-11-21 18:54:29,811 | INFO     | extracted standard info from prmon json
[2025-11-21 19:55:23] 2025-11-21 18:54:29,811 | INFO     | extracted standard memory fields from prmon json
[2025-11-21 19:55:23] 2025-11-21 18:54:29,811 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-21 19:55:23] 2025-11-21 18:54:29,844 | INFO     | fitting pss+swap vs Time
[2025-11-21 19:55:23] 2025-11-21 18:54:29,850 | INFO     | sum of square deviations: 1003183518408.6863
[2025-11-21 19:55:23] 2025-11-21 18:54:29,936 | INFO     | sum of deviations: 889813394822.5546
[2025-11-21 19:55:23] 2025-11-21 18:54:29,937 | INFO     | mean x: 1763706052.2630155
[2025-11-21 19:55:23] 2025-11-21 18:54:29,937 | INFO     | mean y: 2885778.15280595
[2025-11-21 19:55:23] 2025-11-21 18:54:29,937 | INFO     | intersect: -1561503230.4731266
[2025-11-21 19:55:23] 2025-11-21 18:54:29,939 | INFO     | chi2: 19.182265236256985
[2025-11-21 19:55:23] 2025-11-21 18:54:29,941 | INFO     | sum of square deviations: 993044111973.1835
[2025-11-21 19:55:23] 2025-11-21 18:54:30,016 | INFO     | sum of deviations: 1375720071555.802
[2025-11-21 19:55:23] 2025-11-21 18:54:30,017 | INFO     | mean x: 1763705899.7673
[2025-11-21 19:55:23] 2025-11-21 18:54:30,017 | INFO     | mean y: 2893085.037313433
[2025-11-21 19:55:23] 2025-11-21 18:54:30,017 | INFO     | intersect: -2440468269.5857553
[2025-11-21 19:55:23] 2025-11-21 18:54:30,019 | INFO     | chi2: 16.08089850581237
[2025-11-21 19:55:23] 2025-11-21 18:54:30,019 | INFO     | current chi2=16.08089850581237 (change=16.16788576451662 %)
[2025-11-21 19:55:23] 2025-11-21 18:54:30,019 | INFO     | right removable region: 1473
[2025-11-21 19:55:23] 2025-11-21 18:54:30,021 | INFO     | sum of square deviations: 993042972493.1837
[2025-11-21 19:55:23] 2025-11-21 18:54:30,093 | INFO     | sum of deviations: 376455106662.57294
[2025-11-21 19:55:23] 2025-11-21 18:54:30,093 | INFO     | mean x: 1763706204.7673
[2025-11-21 19:55:23] 2025-11-21 18:54:30,093 | INFO     | mean y: 2893495.9579375847
[2025-11-21 19:55:23] 2025-11-21 18:54:30,094 | INFO     | intersect: -665714233.8466988
[2025-11-21 19:55:23] 2025-11-21 18:54:30,095 | INFO     | chi2: 16.076880252260302
[2025-11-21 19:55:23] 2025-11-21 18:54:30,096 | INFO     | current chi2=16.076880252260302 (change=16.188833517571737 %)
[2025-11-21 19:55:23] 2025-11-21 18:54:30,096 | INFO     | left removable region: 10
[2025-11-21 19:55:23] 2025-11-21 18:54:30,098 | INFO     | sum of square deviations: 970976588084.6416
[2025-11-21 19:55:23] 2025-11-21 18:54:30,155 | INFO     | sum of deviations: 809732444749.1353
[2025-11-21 19:55:23] 2025-11-21 18:54:30,156 | INFO     | mean x: 1763706174.2734108
[2025-11-21 19:55:23] 2025-11-21 18:54:30,156 | INFO     | mean y: 2904793.5946684894
[2025-11-21 19:55:23] 2025-11-21 18:54:30,156 | INFO     | intersect: -1467913483.4254782
[2025-11-21 19:55:23] 2025-11-21 18:54:30,158 | INFO     | chi2: 11.95037887105973
[2025-11-21 19:55:23] 2025-11-21 18:54:30,158 | INFO     | current memory leak: 0.83 B/s (using 1463 data points, chi2=11.95)
[2025-11-21 19:55:23] 2025-11-21 18:54:30,160 | INFO     | could have reported an average CPU frequency of 1999 MHz (50 samples)
[2025-11-21 19:55:23] 2025-11-21 18:54:30,160 | INFO     | ..............................
[2025-11-21 19:55:23] 2025-11-21 18:54:30,160 | INFO     | . Timing measurements:
[2025-11-21 19:55:23] 2025-11-21 18:54:30,160 | INFO     | . get job = 0 s
[2025-11-21 19:55:23] 2025-11-21 18:54:30,160 | INFO     | . initial setup = 2 s
[2025-11-21 19:55:23] 2025-11-21 18:54:30,160 | INFO     | . payload setup = 12 s
[2025-11-21 19:55:23] 2025-11-21 18:54:30,161 | INFO     | . stage-in = 0 s
[2025-11-21 19:55:23] 2025-11-21 18:54:30,161 | INFO     | . payload execution = 90200 s
[2025-11-21 19:55:23] 2025-11-21 18:54:30,161 | INFO     | . stage-out = 5 s
[2025-11-21 19:55:23] 2025-11-21 18:54:30,161 | INFO     | . log creation = 1 s
[2025-11-21 19:55:23] 2025-11-21 18:54:30,161 | INFO     | ..............................
[2025-11-21 19:55:23] 2025-11-21 18:54:30,282 | INFO     | 
[2025-11-21 19:55:23] 2025-11-21 18:54:30,282 | INFO     | job summary report
[2025-11-21 19:55:23] 2025-11-21 18:54:30,283 | INFO     | --------------------------------------------------
[2025-11-21 19:55:23] 2025-11-21 18:54:30,283 | INFO     | PanDA job id: 6891561872
[2025-11-21 19:55:23] 2025-11-21 18:54:30,283 | INFO     | task id: 47493068
[2025-11-21 19:55:23] 2025-11-21 18:54:30,283 | INFO     | errors: (none)
[2025-11-21 19:55:23] 2025-11-21 18:54:30,283 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-21 19:55:23] 2025-11-21 18:54:30,283 | INFO     | pilot state: finished 
[2025-11-21 19:55:23] 2025-11-21 18:54:30,283 | INFO     | transexitcode: 0
[2025-11-21 19:55:23] 2025-11-21 18:54:30,283 | INFO     | exeerrorcode: 0
[2025-11-21 19:55:23] 2025-11-21 18:54:30,283 | INFO     | exeerrordiag: 
[2025-11-21 19:55:23] 2025-11-21 18:54:30,283 | INFO     | exitcode: 0
[2025-11-21 19:55:23] 2025-11-21 18:54:30,284 | INFO     | exitmsg: OK
[2025-11-21 19:55:23] 2025-11-21 18:54:30,284 | INFO     | cpuconsumptiontime: 340201 s
[2025-11-21 19:55:23] 2025-11-21 18:54:30,284 | INFO     | nevents: 1000
[2025-11-21 19:55:23] 2025-11-21 18:54:30,284 | INFO     | neventsw: 0
[2025-11-21 19:55:23] 2025-11-21 18:54:30,284 | INFO     | pid: 30353
[2025-11-21 19:55:23] 2025-11-21 18:54:30,284 | INFO     | pgrp: 30353
[2025-11-21 19:55:23] 2025-11-21 18:54:30,284 | INFO     | corecount: 8
[2025-11-21 19:55:23] 2025-11-21 18:54:30,284 | INFO     | event service: False
[2025-11-21 19:55:23] 2025-11-21 18:54:30,284 | INFO     | sizes: {0: 2298622, 1: 2298821, 11: 2299083, 12: 2299111, 90216: 2362812, 90217: 2362811, 90223: 2371991, 90226: 2372047, 90330: 2372293}
[2025-11-21 19:55:23] 2025-11-21 18:54:30,284 | INFO     | --------------------------------------------------
[2025-11-21 19:55:23] 2025-11-21 18:54:30,285 | INFO     | 
[2025-11-21 19:55:23] 2025-11-21 18:54:30,285 | INFO     | executing command: ls -lF /var/lib/boinc/slots/10
[2025-11-21 19:55:23] 2025-11-21 18:54:30,680 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-21 19:55:23] 2025-11-21 18:54:30,680 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-21 19:55:23] 2025-11-21 18:54:30,681 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-21 19:55:23] 2025-11-21 18:54:30,681 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-21 19:55:23] 2025-11-21 18:54:30,681 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-21 19:55:23] 2025-11-21 18:54:30,681 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-21 19:55:23] 2025-11-21 18:54:30,681 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-21 19:55:23] 2025-11-21 18:54:30,681 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-21 19:55:23] 2025-11-21 18:54:30,681 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-21 19:55:23] 2025-11-21 18:54:30,681 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-21 19:55:23] 2025-11-21 18:54:30,681 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-21 19:55:23] 2025-11-21 18:54:30,681 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-21 19:55:23] 2025-11-21 18:54:30,681 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-21 19:55:23] 2025-11-21 18:54:30,682 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-21 19:55:23] 2025-11-21 18:54:30,682 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-21 19:55:23] 2025-11-21 18:54:30,682 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-21 19:55:23] 2025-11-21 18:54:30,682 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-21 19:55:23] 2025-11-21 18:54:30,682 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-21 19:55:23] 2025-11-21 18:54:30,682 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-21 19:55:23] 2025-11-21 18:54:30,682 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-21 19:55:23] 2025-11-21 18:54:30,682 | INFO     | job 6891561872 has completed (purged errors)
[2025-11-21 19:55:23] 2025-11-21 18:54:30,683 | INFO     | overall cleanup function is called
[2025-11-21 19:55:23] 2025-11-21 18:54:31,703 | INFO     | --- collectZombieJob: --- 10, [30353]
[2025-11-21 19:55:23] 2025-11-21 18:54:31,703 | INFO     | zombie collector waiting for pid 30353
[2025-11-21 19:55:23] 2025-11-21 18:54:31,704 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-21 19:55:23] 2025-11-21 18:54:31,704 | INFO     | collected zombie processes
[2025-11-21 19:55:23] 2025-11-21 18:54:31,704 | INFO     | will attempt to kill all subprocesses of pid=30353
[2025-11-21 19:55:23] 2025-11-21 18:54:31,811 | INFO     | process IDs to be killed: [30353] (in reverse order)
[2025-11-21 19:55:23] 2025-11-21 18:54:32,596 | WARNING  | found no corresponding commands to process id(s)
[2025-11-21 19:55:23] 2025-11-21 18:54:32,596 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-21 19:55:23] 2025-11-21 18:54:32,599 | INFO     | did not find any defunct processes belonging to 30353
[2025-11-21 19:55:23] 2025-11-21 18:54:32,602 | INFO     | did not find any defunct processes belonging to 30353
[2025-11-21 19:55:23] 2025-11-21 18:54:32,638 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-21 19:55:23] 2025-11-21 18:54:32,639 | INFO     | ready for new job
[2025-11-21 19:55:23] 2025-11-21 18:54:32,639 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-21 19:55:23] 2025-11-21 18:54:32,645 | INFO     | ***************************************
[2025-11-21 19:55:23] 2025-11-21 18:54:32,646 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-21 19:55:23] 2025-11-21 18:54:32,646 | INFO     | ***************************************
[2025-11-21 19:55:23] 2025-11-21 18:54:32,646 | INFO     | 
[2025-11-21 19:55:23] 2025-11-21 18:54:32,647 | INFO     | pilot is running in a VM
[2025-11-21 19:55:23] 2025-11-21 18:54:32,647 | INFO     | architecture information:
[2025-11-21 19:55:23] 2025-11-21 18:54:32,651 | INFO     | executing command: cat /etc/os-release
[2025-11-21 19:55:23] 2025-11-21 18:54:32,831 | INFO     | cat /etc/os-release:
[2025-11-21 19:55:23] NAME="CentOS Linux"
[2025-11-21 19:55:23] VERSION="7 (Core)"
[2025-11-21 19:55:23] ID="centos"
[2025-11-21 19:55:23] ID_LIKE="rhel fedora"
[2025-11-21 19:55:23] VERSION_ID="7"
[2025-11-21 19:55:23] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-21 19:55:23] ANSI_COLOR="0;31"
[2025-11-21 19:55:23] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-21 19:55:23] HOME_URL="https://www.centos.org/"
[2025-11-21 19:55:23] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-21 19:55:23] 
[2025-11-21 19:55:23] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-21 19:55:23] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-21 19:55:23] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-21 19:55:23] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-21 19:55:23] 
[2025-11-21 19:55:23] 2025-11-21 18:54:32,831 | INFO     | ***************************************
[2025-11-21 19:55:23] 2025-11-21 18:54:33,335 | INFO     | executing command: df -mP /var/lib/boinc/slots/10
[2025-11-21 19:55:23] 2025-11-21 18:54:33,385 | INFO     | sufficient remaining disk space (494731788288 B)
[2025-11-21 19:55:23] 2025-11-21 18:54:33,385 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-21 19:55:23] 2025-11-21 18:54:33,385 | INFO     | current server update state: UPDATING_FINAL
[2025-11-21 19:55:23] 2025-11-21 18:54:33,386 | INFO     | update_server=False
[2025-11-21 19:55:23] 2025-11-21 18:54:33,386 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-21 19:55:23] 2025-11-21 18:54:33,435 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-21 19:55:23] 2025-11-21 18:54:33,435 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-21 19:55:23] 2025-11-21 18:54:33,436 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-21 19:55:23] 2025-11-21 18:54:33,436 | INFO     | will abort loop
[2025-11-21 19:55:23] 2025-11-21 18:54:33,583 | INFO     | all data control threads have been joined
[2025-11-21 19:55:23] 2025-11-21 18:54:33,761 | INFO     | all payload control threads have been joined
[2025-11-21 19:55:23] 2025-11-21 18:54:34,247 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-21 19:55:23] 2025-11-21 18:54:34,392 | INFO     | [job] retrieve thread has finished
[2025-11-21 19:55:23] 2025-11-21 18:54:34,442 | INFO     | [job] job monitor thread has finished
[2025-11-21 19:55:23] 2025-11-21 18:54:34,497 | INFO     | [payload] validate_pre thread has finished
[2025-11-21 19:55:23] 2025-11-21 18:54:34,589 | INFO     | [data] control thread has finished
[2025-11-21 19:55:23] 2025-11-21 18:54:34,719 | INFO     | all job control threads have been joined
[2025-11-21 19:55:23] 2025-11-21 18:54:34,767 | INFO     | [payload] control thread has finished
[2025-11-21 19:55:23] 2025-11-21 18:54:34,992 | INFO     | [job] create_data_payload thread has finished
[2025-11-21 19:55:23] 2025-11-21 18:54:35,002 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-21 19:55:23] 2025-11-21 18:54:35,092 | INFO     | [data] copytool_in thread has finished
[2025-11-21 19:55:23] 2025-11-21 18:54:35,297 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-21 19:55:23] 2025-11-21 18:54:35,357 | INFO     | [payload] failed_post thread has finished
[2025-11-21 19:55:23] 2025-11-21 18:54:35,420 | INFO     | [payload] execute_payloads thread has finished
[2025-11-21 19:55:23] 2025-11-21 18:54:35,421 | INFO     | [job] validate thread has finished
[2025-11-21 19:55:23] 2025-11-21 18:54:35,725 | INFO     | [job] control thread has finished
[2025-11-21 19:55:23] 2025-11-21 18:54:35,823 | INFO     | [payload] validate_post thread has finished
[2025-11-21 19:55:23] 2025-11-21 18:54:36,187 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-21 19:55:23] 2025-11-21 18:54:36,254 | INFO     | [data] copytool_out thread has finished
[2025-11-21 19:55:23] 2025-11-21 18:54:36,303 | INFO     | [job] queue monitor thread has finished
[2025-11-21 19:55:23] 2025-11-21 18:54:40,196 | INFO     | [data] queue_monitor thread has finished
[2025-11-21 19:55:23] 2025-11-21 18:55:02,908 | INFO     | PID=23811 has CPU usage=1.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-21 19:55:23] 2025-11-21 18:55:02,908 | INFO     | .. there are 9 such processes running
[2025-11-21 19:55:23] 2025-11-21 18:55:02,909 | INFO     | found 0 job(s) in 20 queues
[2025-11-21 19:55:23] 2025-11-21 18:55:02,910 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-21 19:55:23] 2025-11-21 18:55:02,910 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-21 19:55:23] 2025-11-21 18:55:13,873 | INFO     | [monitor] cgroup control has ended
[2025-11-21 19:55:23] 2025-11-21 18:55:14,850 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140538914670400)>', '<ExcThread(monitor, started 140538628003584)>']
[2025-11-21 19:55:23] 2025-11-21 18:55:14,981 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-21 19:55:23] 2025-11-21 18:55:14,981 | INFO     | [monitor] control thread has ended
[2025-11-21 19:55:23] 2025-11-21 18:55:19,876 | INFO     | all workflow threads have been joined
[2025-11-21 19:55:23] 2025-11-21 18:55:19,876 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-21 19:55:23] 2025-11-21 18:55:19,877 | INFO     | traces error code: 0
[2025-11-21 19:55:23] 2025-11-21 18:55:19,877 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-21 19:55:23] 2025-11-21 18:55:20,399 [wrapper] ==== pilot stdout END ====
[2025-11-21 19:55:23] 2025-11-21 18:55:20,460 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-21 19:55:23] 2025-11-21 18:55:20,535 [wrapper] pilotpid: 23811
[2025-11-21 19:55:23] 2025-11-21 18:55:20,600 [wrapper] Pilot exit status: 0
[2025-11-21 19:55:23] 2025-11-21 18:55:21,033 [wrapper] pandaids: 6891561872
[2025-11-21 19:55:23] 2025-11-21 18:55:21,470 [wrapper] cleanup supervisor_pilot 24182 23812
[2025-11-21 19:55:23] 2025-11-21 18:55:21,517 [wrapper] Test setup, not cleaning
[2025-11-21 19:55:23] 2025-11-21 18:55:21,595 [wrapper] apfmon messages muted
[2025-11-21 19:55:23] 2025-11-21 18:55:21,672 [wrapper] ==== wrapper stdout END ====
[2025-11-21 19:55:23] 2025-11-21 18:55:21,719 [wrapper] ==== wrapper stderr END ====
[2025-11-21 19:55:23]  *** Error codes and diagnostics ***
[2025-11-21 19:55:23]     "exeErrorCode": 0,
[2025-11-21 19:55:23]     "exeErrorDiag": "",
[2025-11-21 19:55:23]     "pilotErrorCode": 0,
[2025-11-21 19:55:23]     "pilotErrorDiag": "",
[2025-11-21 19:55:23]  *** Listing of results directory ***
[2025-11-21 19:55:23] total 1345728
[2025-11-21 19:55:23] -rw-r--r--. 1 boinc boinc    576529 Nov 18 16:15 pilot3.tar.gz
[2025-11-21 19:55:23] -rw-r--r--. 1 boinc boinc      5112 Nov 18 16:23 queuedata.json
[2025-11-21 19:55:23] -rwx------. 1 boinc boinc     36292 Nov 18 16:24 runpilot2-wrapper.sh
[2025-11-21 19:55:23] -rw-r--r--. 1 boinc boinc       100 Nov 20 18:48 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-21 19:55:23] -rwxr-xr-x. 1 boinc boinc      7986 Nov 20 18:48 run_atlas
[2025-11-21 19:55:23] -rw-r--r--. 1 boinc boinc       105 Nov 20 18:48 job.xml
[2025-11-21 19:55:23] -rw-r--r--. 2 boinc boinc 410801196 Nov 20 18:48 EVNT.47493065._000099.pool.root.1
[2025-11-21 19:55:23] drwxrwx--x. 2 boinc boinc        68 Nov 20 18:48 shared
[2025-11-21 19:55:23] -rw-r--r--. 2 boinc boinc    590098 Nov 20 18:48 input.tar.gz
[2025-11-21 19:55:23] -rw-r--r--. 1 boinc boinc      6391 Nov 20 18:48 init_data.xml
[2025-11-21 19:55:23] -rw-r--r--. 2 boinc boinc     15120 Nov 20 18:48 start_atlas.sh
[2025-11-21 19:55:23] -rw-r--r--. 1 boinc boinc         0 Nov 20 18:48 boinc_lockfile
[2025-11-21 19:55:23] -rw-r--r--. 1 boinc boinc      2771 Nov 20 18:48 pandaJob.out
[2025-11-21 19:55:23] -rw-------. 1 boinc boinc    989440 Nov 20 18:48 agis_schedconf.cvmfs.json
[2025-11-21 19:55:23] drwx------. 5 boinc boinc      4096 Nov 20 18:48 pilot3
[2025-11-21 19:55:23] -rw-r--r--. 1 boinc boinc       533 Nov 21 19:25 boinc_task_state.xml
[2025-11-21 19:55:23] -rw-------. 1 boinc boinc 934125786 Nov 21 19:51 HITS.47493068._000983.pool.root.1
[2025-11-21 19:55:23] -rw-------. 1 boinc boinc      1035 Nov 21 19:52 memory_monitor_summary.json
[2025-11-21 19:55:23] -rw-------. 1 boinc boinc   1526164 Nov 21 19:52 agis_ddmendpoints.agis.ALL.json
[2025-11-21 19:55:23] -rw-------. 1 boinc boinc   2548080 Nov 21 19:52 log.47493068._000983.job.log.tgz.1
[2025-11-21 19:55:23] -rw-------. 1 boinc boinc      8627 Nov 21 19:54 heartbeat.json
[2025-11-21 19:55:23] -rw-r--r--. 1 boinc boinc      8192 Nov 21 19:54 boinc_mmap_file
[2025-11-21 19:55:23] -rw-r--r--. 1 boinc boinc        29 Nov 21 19:54 wrapper_checkpoint.txt
[2025-11-21 19:55:23] -rw-------. 1 boinc boinc        95 Nov 21 19:55 pilot_heartbeat.json
[2025-11-21 19:55:23] -rw-------. 1 boinc boinc      5071 Nov 21 19:55 pilotlog.txt
[2025-11-21 19:55:23] -rw-------. 1 boinc boinc  12044946 Nov 21 19:55 log.47493068._000983.job.log.1
[2025-11-21 19:55:23] -rw-------. 1 boinc boinc       353 Nov 21 19:55 output.list
[2025-11-21 19:55:23] -rw-r--r--. 1 boinc boinc       620 Nov 21 19:55 runtime_log
[2025-11-21 19:55:23] -rw-------. 1 boinc boinc  14612480 Nov 21 19:55 result.tar.gz
[2025-11-21 19:55:23] -rw-r--r--. 1 boinc boinc      8717 Nov 21 19:55 runtime_log.err
[2025-11-21 19:55:23] -rw-------. 1 boinc boinc       662 Nov 21 19:55 P5oLDmckcf8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmnCFKDmdJrATn.diag
[2025-11-21 19:55:23] -rw-r--r--. 1 boinc boinc     21329 Nov 21 19:55 stderr.txt
[2025-11-21 19:55:23] HITS file was successfully produced:
[2025-11-21 19:55:23] -rw-------. 1 boinc boinc 934125786 Nov 21 19:51 shared/HITS.pool.root.1
[2025-11-21 19:55:23]  *** Contents of shared directory: ***
[2025-11-21 19:55:23] total 1328280
[2025-11-21 19:55:23] -rw-r--r--. 2 boinc boinc 410801196 Nov 20 18:48 ATLAS.root_0
[2025-11-21 19:55:23] -rw-r--r--. 2 boinc boinc    590098 Nov 20 18:48 input.tar.gz
[2025-11-21 19:55:23] -rw-r--r--. 2 boinc boinc     15120 Nov 20 18:48 start_atlas.sh
[2025-11-21 19:55:23] -rw-------. 1 boinc boinc 934125786 Nov 21 19:51 HITS.pool.root.1
[2025-11-21 19:55:23] -rw-------. 1 boinc boinc  14612480 Nov 21 19:55 result.tar.gz
19:55:24 (20000): run_atlas exited; CPU time 340732.932446
19:55:24 (20000): called boinc_finish(0)

</stderr_txt>
]]>

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