Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
17:09:05 (30932): wrapper (7.7.26015): starting
17:09:05 (30932): wrapper: running run_atlas (--nthreads 8)
[2025-11-19 17:09:05] Arguments: --nthreads 8
[2025-11-19 17:09:05] Threads: 8
[2025-11-19 17:09:05] Checking for CVMFS
[2025-11-19 17:09:05] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-19 17:09:06] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-19 17:09:06] Running cvmfs_config stat atlas.cern.ch
[2025-11-19 17:09:07] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-19 17:09:07] 2.11.2.0 21240 275345 144280 153049 0 129 19964245 25165824 4251 130560 105 128183144 99.875 79364689 3128 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-11-19 17:09:07] CVMFS is ok
[2025-11-19 17:09:07] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-19 17:09:07] Checking for apptainer binary...
[2025-11-19 17:09:07] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-19 17:09:07] Running /usr/bin/apptainer --version
[2025-11-19 17:09:07] apptainer version 1.3.2-1.el7
[2025-11-19 17:09:07] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-19 17:09:22] cg-vwn384.simple-grid.lan
[2025-11-19 17:09:22] apptainer works
[2025-11-19 17:09:22] Set ATHENA_PROC_NUMBER=8
[2025-11-19 17:09:22] Set ATHENA_CORE_NUMBER=8
[2025-11-19 17:09:22] Starting ATLAS job with PandaID=6891555638
[2025-11-19 17:09:22] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/10 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-20 18:48:01]  *** The last 200 lines of the pilot log: ***
[2025-11-20 18:48:01] 2025-11-20 17:47:16,651 | INFO     | time since job start (92043s) is within the limit (172800.0s)
[2025-11-20 18:48:01] 2025-11-20 17:47:18,657 | INFO     | time since job start (92045s) is within the limit (172800.0s)
[2025-11-20 18:48:01] 2025-11-20 17:47:19,084 | INFO     | monitor loop #6179: job 0:6891555638 is in state 'finished'
[2025-11-20 18:48:01] 2025-11-20 17:47:19,085 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-20 18:48:01] 2025-11-20 17:47:20,664 | INFO     | time since job start (92047s) is within the limit (172800.0s)
[2025-11-20 18:48:01] 2025-11-20 17:47:21,590 | INFO     | monitor loop #6180: job 0:6891555638 is in state 'finished'
[2025-11-20 18:48:01] 2025-11-20 17:47:21,591 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-20 18:48:01] 2025-11-20 17:47:22,675 | INFO     | time since job start (92049s) is within the limit (172800.0s)
[2025-11-20 18:48:01] 2025-11-20 17:47:24,096 | INFO     | monitor loop #6181: job 0:6891555638 is in state 'finished'
[2025-11-20 18:48:01] 2025-11-20 17:47:24,096 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-20 18:48:01] 2025-11-20 17:47:24,682 | INFO     | time since job start (92051s) is within the limit (172800.0s)
[2025-11-20 18:48:01] 2025-11-20 17:47:26,614 | INFO     | monitor loop #6182: job 0:6891555638 is in state 'finished'
[2025-11-20 18:48:01] 2025-11-20 17:47:26,614 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-20 18:48:01] 2025-11-20 17:47:26,670 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-20 18:48:01] 2025-11-20 17:47:26,671 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2025-11-20 18:48:01] 2025-11-20 17:47:26,673 | INFO     | using path: /var/lib/boinc/slots/10/PanDA_Pilot-6891555638/memory_monitor_summary.json (trf name=prmon)
[2025-11-20 18:48:01] 2025-11-20 17:47:26,674 | INFO     | extracted standard info from prmon json
[2025-11-20 18:48:01] 2025-11-20 17:47:26,674 | INFO     | extracted standard memory fields from prmon json
[2025-11-20 18:48:01] 2025-11-20 17:47:26,674 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-20 18:48:01] 2025-11-20 17:47:26,709 | INFO     | fitting pss+swap vs Time
[2025-11-20 18:48:01] 2025-11-20 17:47:26,712 | INFO     | sum of square deviations: 1046527668958.6951
[2025-11-20 18:48:01] 2025-11-20 17:47:26,748 | INFO     | time since job start (92053s) is within the limit (172800.0s)
[2025-11-20 18:48:01] 2025-11-20 17:47:26,784 | INFO     | sum of deviations: 2611597096086.3057
[2025-11-20 18:48:01] 2025-11-20 17:47:26,784 | INFO     | mean x: 1763615023.756
[2025-11-20 18:48:01] 2025-11-20 17:47:26,785 | INFO     | mean y: 2865467.2986666667
[2025-11-20 18:48:01] 2025-11-20 17:47:26,785 | INFO     | intersect: -4398214419.330816
[2025-11-20 18:48:01] 2025-11-20 17:47:26,787 | INFO     | chi2: 15.572936044981669
[2025-11-20 18:48:01] 2025-11-20 17:47:26,789 | INFO     | sum of square deviations: 1036097778235.7816
[2025-11-20 18:48:01] 2025-11-20 17:47:26,855 | INFO     | sum of deviations: 3101788416108.041
[2025-11-20 18:48:01] 2025-11-20 17:47:26,855 | INFO     | mean x: 1763614871.2602007
[2025-11-20 18:48:01] 2025-11-20 17:47:26,855 | INFO     | mean y: 2872633.210702341
[2025-11-20 18:48:01] 2025-11-20 17:47:26,855 | INFO     | intersect: -5276899501.293279
[2025-11-20 18:48:01] 2025-11-20 17:47:26,858 | INFO     | chi2: 12.467628304678517
[2025-11-20 18:48:01] 2025-11-20 17:47:26,858 | INFO     | current chi2=12.467628304678517 (change=19.940412850432452 %)
[2025-11-20 18:48:01] 2025-11-20 17:47:26,858 | INFO     | right removable region: 1494
[2025-11-20 18:48:01] 2025-11-20 17:47:26,860 | INFO     | sum of square deviations: 1036096628995.7817
[2025-11-20 18:48:01] 2025-11-20 17:47:26,931 | INFO     | sum of deviations: 2093719854078.8035
[2025-11-20 18:48:01] 2025-11-20 17:47:26,931 | INFO     | mean x: 1763615176.2602007
[2025-11-20 18:48:01] 2025-11-20 17:47:26,931 | INFO     | mean y: 2873035.9799331105
[2025-11-20 18:48:01] 2025-11-20 17:47:26,931 | INFO     | intersect: -3560999296.149529
[2025-11-20 18:48:01] 2025-11-20 17:47:26,934 | INFO     | chi2: 12.459132095540927
[2025-11-20 18:48:01] 2025-11-20 17:47:26,934 | INFO     | current chi2=12.459132095540927 (change=19.994970379680947 %)
[2025-11-20 18:48:01] 2025-11-20 17:47:26,934 | INFO     | left removable region: 10
[2025-11-20 18:48:01] 2025-11-20 17:47:26,937 | INFO     | sum of square deviations: 1013394613881.8604
[2025-11-20 18:48:01] 2025-11-20 17:47:27,001 | INFO     | sum of deviations: 2527540612921.817
[2025-11-20 18:48:01] 2025-11-20 17:47:27,001 | INFO     | mean x: 1763615145.7661724
[2025-11-20 18:48:01] 2025-11-20 17:47:27,002 | INFO     | mean y: 2884038.163746631
[2025-11-20 18:48:01] 2025-11-20 17:47:27,002 | INFO     | intersect: -4395806112.174561
[2025-11-20 18:48:01] 2025-11-20 17:47:27,003 | INFO     | chi2: 8.412502028484404
[2025-11-20 18:48:01] 2025-11-20 17:47:27,004 | INFO     | current memory leak: 2.49 B/s (using 1484 data points, chi2=8.41)
[2025-11-20 18:48:01] 2025-11-20 17:47:27,006 | INFO     | could have reported an average CPU frequency of 1999 MHz (51 samples)
[2025-11-20 18:48:01] 2025-11-20 17:47:27,007 | INFO     | ..............................
[2025-11-20 18:48:01] 2025-11-20 17:47:27,007 | INFO     | . Timing measurements:
[2025-11-20 18:48:01] 2025-11-20 17:47:27,007 | INFO     | . get job = 0 s
[2025-11-20 18:48:01] 2025-11-20 17:47:27,007 | INFO     | . initial setup = 11 s
[2025-11-20 18:48:01] 2025-11-20 17:47:27,007 | INFO     | . payload setup = 154 s
[2025-11-20 18:48:01] 2025-11-20 17:47:27,007 | INFO     | . stage-in = 0 s
[2025-11-20 18:48:01] 2025-11-20 17:47:27,007 | INFO     | . payload execution = 91610 s
[2025-11-20 18:48:01] 2025-11-20 17:47:27,007 | INFO     | . stage-out = 5 s
[2025-11-20 18:48:01] 2025-11-20 17:47:27,007 | INFO     | . log creation = 2 s
[2025-11-20 18:48:01] 2025-11-20 17:47:27,008 | INFO     | ..............................
[2025-11-20 18:48:01] 2025-11-20 17:47:27,140 | INFO     | 
[2025-11-20 18:48:01] 2025-11-20 17:47:27,141 | INFO     | job summary report
[2025-11-20 18:48:01] 2025-11-20 17:47:27,141 | INFO     | --------------------------------------------------
[2025-11-20 18:48:01] 2025-11-20 17:47:27,141 | INFO     | PanDA job id: 6891555638
[2025-11-20 18:48:01] 2025-11-20 17:47:27,141 | INFO     | task id: 47493068
[2025-11-20 18:48:01] 2025-11-20 17:47:27,141 | INFO     | errors: (none)
[2025-11-20 18:48:01] 2025-11-20 17:47:27,141 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-20 18:48:01] 2025-11-20 17:47:27,141 | INFO     | pilot state: finished 
[2025-11-20 18:48:01] 2025-11-20 17:47:27,142 | INFO     | transexitcode: 0
[2025-11-20 18:48:01] 2025-11-20 17:47:27,142 | INFO     | exeerrorcode: 0
[2025-11-20 18:48:01] 2025-11-20 17:47:27,142 | INFO     | exeerrordiag: 
[2025-11-20 18:48:01] 2025-11-20 17:47:27,142 | INFO     | exitcode: 0
[2025-11-20 18:48:01] 2025-11-20 17:47:27,142 | INFO     | exitmsg: OK
[2025-11-20 18:48:01] 2025-11-20 17:47:27,142 | INFO     | cpuconsumptiontime: 340291 s
[2025-11-20 18:48:01] 2025-11-20 17:47:27,142 | INFO     | nevents: 1000
[2025-11-20 18:48:01] 2025-11-20 17:47:27,142 | INFO     | neventsw: 0
[2025-11-20 18:48:01] 2025-11-20 17:47:27,142 | INFO     | pid: 8892
[2025-11-20 18:48:01] 2025-11-20 17:47:27,142 | INFO     | pgrp: 8892
[2025-11-20 18:48:01] 2025-11-20 17:47:27,143 | INFO     | corecount: 8
[2025-11-20 18:48:01] 2025-11-20 17:47:27,143 | INFO     | event service: False
[2025-11-20 18:48:01] 2025-11-20 17:47:27,143 | INFO     | sizes: {0: 2296970, 1: 2297225, 2: 2297225, 13: 2297253, 23: 2297309, 34: 2297337, 45: 2297493, 56: 2297521, 66: 2297549, 77: 2297577, 88: 2297633, 91: 2298203, 99
[2025-11-20 18:48:01] 2025-11-20 17:47:27,143 | INFO     | --------------------------------------------------
[2025-11-20 18:48:01] 2025-11-20 17:47:27,143 | INFO     | 
[2025-11-20 18:48:01] 2025-11-20 17:47:27,143 | INFO     | executing command: ls -lF /var/lib/boinc/slots/10
[2025-11-20 18:48:01] 2025-11-20 17:47:27,175 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-20 18:48:01] 2025-11-20 17:47:27,175 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-20 18:48:01] 2025-11-20 17:47:27,175 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-20 18:48:01] 2025-11-20 17:47:27,175 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-20 18:48:01] 2025-11-20 17:47:27,176 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-20 18:48:01] 2025-11-20 17:47:27,176 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-20 18:48:01] 2025-11-20 17:47:27,176 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-20 18:48:01] 2025-11-20 17:47:27,176 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-20 18:48:01] 2025-11-20 17:47:27,176 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-20 18:48:01] 2025-11-20 17:47:27,176 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-20 18:48:01] 2025-11-20 17:47:27,176 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-20 18:48:01] 2025-11-20 17:47:27,176 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-20 18:48:01] 2025-11-20 17:47:27,176 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-20 18:48:01] 2025-11-20 17:47:27,177 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-20 18:48:01] 2025-11-20 17:47:27,177 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-20 18:48:01] 2025-11-20 17:47:27,177 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-20 18:48:01] 2025-11-20 17:47:27,177 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-20 18:48:01] 2025-11-20 17:47:27,177 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-20 18:48:01] 2025-11-20 17:47:27,177 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-20 18:48:01] 2025-11-20 17:47:27,178 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-20 18:48:01] 2025-11-20 17:47:27,178 | INFO     | job 6891555638 has completed (purged errors)
[2025-11-20 18:48:01] 2025-11-20 17:47:27,178 | INFO     | overall cleanup function is called
[2025-11-20 18:48:01] 2025-11-20 17:47:28,197 | INFO     | --- collectZombieJob: --- 10, [8892]
[2025-11-20 18:48:01] 2025-11-20 17:47:28,197 | INFO     | zombie collector waiting for pid 8892
[2025-11-20 18:48:01] 2025-11-20 17:47:28,198 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-20 18:48:01] 2025-11-20 17:47:28,198 | INFO     | collected zombie processes
[2025-11-20 18:48:01] 2025-11-20 17:47:28,198 | INFO     | will attempt to kill all subprocesses of pid=8892
[2025-11-20 18:48:01] 2025-11-20 17:47:28,312 | INFO     | process IDs to be killed: [8892] (in reverse order)
[2025-11-20 18:48:01] 2025-11-20 17:47:28,386 | WARNING  | found no corresponding commands to process id(s)
[2025-11-20 18:48:01] 2025-11-20 17:47:28,386 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-20 18:48:01] 2025-11-20 17:47:28,390 | INFO     | did not find any defunct processes belonging to 8892
[2025-11-20 18:48:01] 2025-11-20 17:47:28,394 | INFO     | did not find any defunct processes belonging to 8892
[2025-11-20 18:48:01] 2025-11-20 17:47:28,396 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-20 18:48:01] 2025-11-20 17:47:28,397 | INFO     | ready for new job
[2025-11-20 18:48:01] 2025-11-20 17:47:28,397 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-20 18:48:01] 2025-11-20 17:47:28,403 | INFO     | ***************************************
[2025-11-20 18:48:01] 2025-11-20 17:47:28,404 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-20 18:48:01] 2025-11-20 17:47:28,404 | INFO     | ***************************************
[2025-11-20 18:48:01] 2025-11-20 17:47:28,404 | INFO     | 
[2025-11-20 18:48:01] 2025-11-20 17:47:28,404 | INFO     | pilot is running in a VM
[2025-11-20 18:48:01] 2025-11-20 17:47:28,405 | INFO     | architecture information:
[2025-11-20 18:48:01] 2025-11-20 17:47:28,405 | INFO     | executing command: cat /etc/os-release
[2025-11-20 18:48:01] 2025-11-20 17:47:28,436 | INFO     | cat /etc/os-release:
[2025-11-20 18:48:01] NAME="CentOS Linux"
[2025-11-20 18:48:01] VERSION="7 (Core)"
[2025-11-20 18:48:01] ID="centos"
[2025-11-20 18:48:01] ID_LIKE="rhel fedora"
[2025-11-20 18:48:01] VERSION_ID="7"
[2025-11-20 18:48:01] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-20 18:48:01] ANSI_COLOR="0;31"
[2025-11-20 18:48:01] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-20 18:48:01] HOME_URL="https://www.centos.org/"
[2025-11-20 18:48:01] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-20 18:48:01] 
[2025-11-20 18:48:01] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-20 18:48:01] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-20 18:48:01] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-20 18:48:01] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-20 18:48:01] 
[2025-11-20 18:48:01] 2025-11-20 17:47:28,436 | INFO     | ***************************************
[2025-11-20 18:48:01] 2025-11-20 17:47:28,937 | INFO     | executing command: df -mP /var/lib/boinc/slots/10
[2025-11-20 18:48:01] 2025-11-20 17:47:28,968 | INFO     | sufficient remaining disk space (494932066304 B)
[2025-11-20 18:48:01] 2025-11-20 17:47:28,969 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-20 18:48:01] 2025-11-20 17:47:28,969 | INFO     | current server update state: UPDATING_FINAL
[2025-11-20 18:48:01] 2025-11-20 17:47:28,969 | INFO     | update_server=False
[2025-11-20 18:48:01] 2025-11-20 17:47:28,969 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-20 18:48:01] 2025-11-20 17:47:28,970 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-20 18:48:01] 2025-11-20 17:47:29,117 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-20 18:48:01] 2025-11-20 17:47:29,118 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-20 18:48:01] 2025-11-20 17:47:29,118 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-20 18:48:01] 2025-11-20 17:47:29,118 | INFO     | will abort loop
[2025-11-20 18:48:01] 2025-11-20 17:47:29,264 | INFO     | all job control threads have been joined
[2025-11-20 18:48:01] 2025-11-20 17:47:29,566 | INFO     | all payload control threads have been joined
[2025-11-20 18:48:01] 2025-11-20 17:47:29,704 | INFO     | all data control threads have been joined
[2025-11-20 18:48:01] 2025-11-20 17:47:29,974 | INFO     | [job] retrieve thread has finished
[2025-11-20 18:48:01] 2025-11-20 17:47:29,977 | INFO     | [job] queue monitor thread has finished
[2025-11-20 18:48:01] 2025-11-20 17:47:30,080 | INFO     | [data] copytool_in thread has finished
[2025-11-20 18:48:01] 2025-11-20 17:47:30,123 | INFO     | [job] job monitor thread has finished
[2025-11-20 18:48:01] 2025-11-20 17:47:30,269 | INFO     | [job] control thread has finished
[2025-11-20 18:48:01] 2025-11-20 17:47:30,431 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-20 18:48:01] 2025-11-20 17:47:30,456 | INFO     | [job] validate thread has finished
[2025-11-20 18:48:01] 2025-11-20 17:47:30,478 | INFO     | [payload] execute_payloads thread has finished
[2025-11-20 18:48:01] 2025-11-20 17:47:30,571 | INFO     | [payload] control thread has finished
[2025-11-20 18:48:01] 2025-11-20 17:47:30,710 | INFO     | [data] control thread has finished
[2025-11-20 18:48:01] 2025-11-20 17:47:30,777 | INFO     | [job] create_data_payload thread has finished
[2025-11-20 18:48:01] 2025-11-20 17:47:30,781 | INFO     | [payload] failed_post thread has finished
[2025-11-20 18:48:01] 2025-11-20 17:47:30,827 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-20 18:48:01] 2025-11-20 17:47:31,042 | INFO     | [payload] validate_post thread has finished
[2025-11-20 18:48:01] 2025-11-20 17:47:31,146 | INFO     | [payload] validate_pre thread has finished
[2025-11-20 18:48:01] 2025-11-20 17:47:31,159 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-20 18:48:01] 2025-11-20 17:47:32,436 | INFO     | [data] copytool_out thread has finished
[2025-11-20 18:48:01] 2025-11-20 17:47:34,835 | INFO     | [data] queue_monitor thread has finished
[2025-11-20 18:48:01] 2025-11-20 17:47:53,215 | INFO     | [monitor] cgroup control has ended
[2025-11-20 18:48:01] 2025-11-20 17:47:53,463 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140595364525888)>', '<ExcThread(monitor, started 140594915555072)>']
[2025-11-20 18:48:01] 2025-11-20 17:47:58,489 | INFO     | all workflow threads have been joined
[2025-11-20 18:48:01] 2025-11-20 17:47:58,489 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-20 18:48:01] 2025-11-20 17:47:58,490 | INFO     | traces error code: 0
[2025-11-20 18:48:01] 2025-11-20 17:47:58,490 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-20 18:48:01] 2025-11-20 17:47:59,980 | INFO     | PID=2345 has CPU usage=2.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-11-20 18:48:01] 2025-11-20 17:47:59,980 | INFO     | .. there are 9 such processes running
[2025-11-20 18:48:01] 2025-11-20 17:47:59,982 | INFO     | found 0 job(s) in 20 queues
[2025-11-20 18:48:01] 2025-11-20 17:47:59,982 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-20 18:48:01] 2025-11-20 17:47:59,982 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-20 18:48:01] 2025-11-20 17:47:59,982 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-20 18:48:01] 2025-11-20 17:47:59,982 | INFO     | [monitor] control thread has ended
[2025-11-20 18:48:01] 2025-11-20 17:48:00,357 [wrapper] ==== pilot stdout END ====
[2025-11-20 18:48:01] 2025-11-20 17:48:00,396 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-20 18:48:01] 2025-11-20 17:48:00,416 [wrapper] pilotpid: 2345
[2025-11-20 18:48:01] 2025-11-20 17:48:00,450 [wrapper] Pilot exit status: 0
[2025-11-20 18:48:01] 2025-11-20 17:48:00,605 [wrapper] pandaids: 6891555638
[2025-11-20 18:48:01] 2025-11-20 17:48:00,729 [wrapper] cleanup supervisor_pilot 15544 2346
[2025-11-20 18:48:01] 2025-11-20 17:48:00,742 [wrapper] Test setup, not cleaning
[2025-11-20 18:48:01] 2025-11-20 17:48:00,748 [wrapper] apfmon messages muted
[2025-11-20 18:48:01] 2025-11-20 17:48:00,756 [wrapper] ==== wrapper stdout END ====
[2025-11-20 18:48:01] 2025-11-20 17:48:00,762 [wrapper] ==== wrapper stderr END ====
[2025-11-20 18:48:01]  *** Error codes and diagnostics ***
[2025-11-20 18:48:01]     "exeErrorCode": 0,
[2025-11-20 18:48:01]     "exeErrorDiag": "",
[2025-11-20 18:48:01]     "pilotErrorCode": 0,
[2025-11-20 18:48:01]     "pilotErrorDiag": "",
[2025-11-20 18:48:01]  *** Listing of results directory ***
[2025-11-20 18:48:01] total 1346740
[2025-11-20 18:48:01] -rw-r--r--. 1 boinc boinc    576529 Nov 18 16:15 pilot3.tar.gz
[2025-11-20 18:48:01] -rw-r--r--. 1 boinc boinc      5112 Nov 18 16:20 queuedata.json
[2025-11-20 18:48:01] -rwx------. 1 boinc boinc     36292 Nov 18 16:21 runpilot2-wrapper.sh
[2025-11-20 18:48:01] -rw-r--r--. 1 boinc boinc       100 Nov 19 17:09 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-20 18:48:01] -rwxr-xr-x. 1 boinc boinc      7986 Nov 19 17:09 run_atlas
[2025-11-20 18:48:01] -rw-r--r--. 1 boinc boinc       105 Nov 19 17:09 job.xml
[2025-11-20 18:48:01] -rw-r--r--. 1 boinc boinc      6390 Nov 19 17:09 init_data.xml
[2025-11-20 18:48:01] -rw-r--r--. 2 boinc boinc 412942226 Nov 19 17:09 EVNT.47493065._000040.pool.root.1
[2025-11-20 18:48:01] -rw-r--r--. 2 boinc boinc     15120 Nov 19 17:09 start_atlas.sh
[2025-11-20 18:48:01] drwxrwx--x. 2 boinc boinc        68 Nov 19 17:09 shared
[2025-11-20 18:48:01] -rw-r--r--. 2 boinc boinc    590098 Nov 19 17:09 input.tar.gz
[2025-11-20 18:48:01] -rw-r--r--. 1 boinc boinc         0 Nov 19 17:09 boinc_lockfile
[2025-11-20 18:48:01] -rw-r--r--. 1 boinc boinc      2771 Nov 19 17:09 pandaJob.out
[2025-11-20 18:48:01] -rw-------. 1 boinc boinc    989434 Nov 19 17:13 agis_schedconf.cvmfs.json
[2025-11-20 18:48:01] drwx------. 5 boinc boinc      4096 Nov 19 17:13 pilot3
[2025-11-20 18:48:01] -rw-r--r--. 1 boinc boinc       533 Nov 20 18:22 boinc_task_state.xml
[2025-11-20 18:48:01] -rw-------. 1 boinc boinc 932646944 Nov 20 18:45 HITS.47493068._000394.pool.root.1
[2025-11-20 18:48:01] -rw-------. 1 boinc boinc      1034 Nov 20 18:45 memory_monitor_summary.json
[2025-11-20 18:48:01] -rw-------. 1 boinc boinc   1526164 Nov 20 18:46 agis_ddmendpoints.agis.ALL.json
[2025-11-20 18:48:01] -rw-------. 1 boinc boinc   2563439 Nov 20 18:46 log.47493068._000394.job.log.tgz.1
[2025-11-20 18:48:01] -rw-------. 1 boinc boinc      7956 Nov 20 18:47 heartbeat.json
[2025-11-20 18:48:01] -rw-r--r--. 1 boinc boinc      8192 Nov 20 18:47 boinc_mmap_file
[2025-11-20 18:48:01] -rw-r--r--. 1 boinc boinc        29 Nov 20 18:47 wrapper_checkpoint.txt
[2025-11-20 18:48:01] -rw-------. 1 boinc boinc        95 Nov 20 18:47 pilot_heartbeat.json
[2025-11-20 18:48:01] -rw-------. 1 boinc boinc       819 Nov 20 18:47 pilotlog.txt
[2025-11-20 18:48:01] -rw-------. 1 boinc boinc  12219954 Nov 20 18:48 log.47493068._000394.job.log.1
[2025-11-20 18:48:01] -rw-------. 1 boinc boinc       353 Nov 20 18:48 output.list
[2025-11-20 18:48:01] -rw-r--r--. 1 boinc boinc       620 Nov 20 18:48 runtime_log
[2025-11-20 18:48:01] -rw-------. 1 boinc boinc  14807040 Nov 20 18:48 result.tar.gz
[2025-11-20 18:48:01] -rw-r--r--. 1 boinc boinc      8717 Nov 20 18:48 runtime_log.err
[2025-11-20 18:48:01] -rw-------. 1 boinc boinc       662 Nov 20 18:48 hxnMDmMhcf8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmRIFKDmbftADn.diag
[2025-11-20 18:48:01] -rw-r--r--. 1 boinc boinc     21413 Nov 20 18:48 stderr.txt
[2025-11-20 18:48:01] HITS file was successfully produced:
[2025-11-20 18:48:01] -rw-------. 1 boinc boinc 932646944 Nov 20 18:45 shared/HITS.pool.root.1
[2025-11-20 18:48:01]  *** Contents of shared directory: ***
[2025-11-20 18:48:01] total 1329112
[2025-11-20 18:48:01] -rw-r--r--. 2 boinc boinc 412942226 Nov 19 17:09 ATLAS.root_0
[2025-11-20 18:48:01] -rw-r--r--. 2 boinc boinc     15120 Nov 19 17:09 start_atlas.sh
[2025-11-20 18:48:01] -rw-r--r--. 2 boinc boinc    590098 Nov 19 17:09 input.tar.gz
[2025-11-20 18:48:01] -rw-------. 1 boinc boinc 932646944 Nov 20 18:45 HITS.pool.root.1
[2025-11-20 18:48:01] -rw-------. 1 boinc boinc  14807040 Nov 20 18:48 result.tar.gz
18:48:03 (30932): run_atlas exited; CPU time 340858.266645
18:48:03 (30932): called boinc_finish(0)

</stderr_txt>
]]>

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