Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
16:37:57 (23573): wrapper (7.7.26015): starting
16:37:57 (23573): wrapper: running run_atlas (--nthreads 8)
[2025-11-18 16:37:57] Arguments: --nthreads 8
[2025-11-18 16:37:57] Threads: 8
[2025-11-18 16:37:57] Checking for CVMFS
[2025-11-18 16:37:58] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-18 16:38:00] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-18 16:38:00] Running cvmfs_config stat atlas.cern.ch
[2025-11-18 16:38:02] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-18 16:38:02] 2.11.2.0 18594 72651 90484 153004 3 11 18162966 25165825 3967 130560 2 20400271 99.919 10862235 2215 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-11-18 16:38:02] CVMFS is ok
[2025-11-18 16:38:02] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-18 16:38:02] Checking for apptainer binary...
[2025-11-18 16:38:02] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-18 16:38:02] Running /usr/bin/apptainer --version
[2025-11-18 16:38:02] apptainer version 1.3.2-1.el7
[2025-11-18 16:38:02] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-18 16:38:07] cg-vwn256.simple-grid.lan
[2025-11-18 16:38:07] apptainer works
[2025-11-18 16:38:07] Set ATHENA_PROC_NUMBER=8
[2025-11-18 16:38:07] Set ATHENA_CORE_NUMBER=8
[2025-11-18 16:38:08] Starting ATLAS job with PandaID=6891555525
[2025-11-18 16:38:08] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/11 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-19 18:14:03]  *** The last 200 lines of the pilot log: ***
[2025-11-19 18:14:04] 2025-11-19 17:12:45,543 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-19 18:14:04] 2025-11-19 17:12:46,765 | INFO     | time since job start (91835s) is within the limit (172800.0s)
[2025-11-19 18:14:04] 2025-11-19 17:12:48,053 | INFO     | monitor loop #6182: job 0:6891555525 is in state 'finished'
[2025-11-19 18:14:04] 2025-11-19 17:12:48,054 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-19 18:14:04] 2025-11-19 17:12:48,776 | INFO     | time since job start (91837s) is within the limit (172800.0s)
[2025-11-19 18:14:04] 2025-11-19 17:12:50,561 | INFO     | monitor loop #6183: job 0:6891555525 is in state 'finished'
[2025-11-19 18:14:04] 2025-11-19 17:12:50,562 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-19 18:14:04] 2025-11-19 17:12:50,783 | INFO     | time since job start (91839s) is within the limit (172800.0s)
[2025-11-19 18:14:04] 2025-11-19 17:12:52,793 | INFO     | time since job start (91841s) is within the limit (172800.0s)
[2025-11-19 18:14:04] 2025-11-19 17:12:52,794 | INFO     | 91848s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-11-19 18:14:04] 2025-11-19 17:12:53,070 | INFO     | monitor loop #6184: job 0:6891555525 is in state 'finished'
[2025-11-19 18:14:04] 2025-11-19 17:12:53,071 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-19 18:14:04] 2025-11-19 17:12:54,800 | INFO     | time since job start (91843s) is within the limit (172800.0s)
[2025-11-19 18:14:04] 2025-11-19 17:12:55,501 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-19 18:14:04] 2025-11-19 17:12:55,502 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2025-11-19 18:14:04] 2025-11-19 17:12:55,504 | INFO     | using path: /var/lib/boinc/slots/11/PanDA_Pilot-6891555525/memory_monitor_summary.json (trf name=prmon)
[2025-11-19 18:14:04] 2025-11-19 17:12:55,505 | INFO     | extracted standard info from prmon json
[2025-11-19 18:14:04] 2025-11-19 17:12:55,505 | INFO     | extracted standard memory fields from prmon json
[2025-11-19 18:14:04] 2025-11-19 17:12:55,505 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-19 18:14:04] 2025-11-19 17:12:55,538 | INFO     | fitting pss+swap vs Time
[2025-11-19 18:14:04] 2025-11-19 17:12:55,541 | INFO     | sum of square deviations: 1042351560673.4117
[2025-11-19 18:14:04] 2025-11-19 17:12:55,590 | INFO     | monitor loop #6185: job 0:6891555525 is in state 'finished'
[2025-11-19 18:14:04] 2025-11-19 17:12:55,591 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-19 18:14:04] 2025-11-19 17:12:55,619 | INFO     | sum of deviations: 2394960283522.004
[2025-11-19 18:14:04] 2025-11-19 17:12:55,620 | INFO     | mean x: 1763526568.545394
[2025-11-19 18:14:04] 2025-11-19 17:12:55,620 | INFO     | mean y: 2855825.0
[2025-11-19 18:14:04] 2025-11-19 17:12:55,620 | INFO     | intersect: -4049113059.541622
[2025-11-19 18:14:04] 2025-11-19 17:12:55,622 | INFO     | chi2: 20.415698947140005
[2025-11-19 18:14:04] 2025-11-19 17:12:55,625 | INFO     | sum of square deviations: 1031949415345.4294
[2025-11-19 18:14:04] 2025-11-19 17:12:55,708 | INFO     | sum of deviations: 2881098011263.27
[2025-11-19 18:14:04] 2025-11-19 17:12:55,709 | INFO     | mean x: 1763526416.048895
[2025-11-19 18:14:04] 2025-11-19 17:12:55,709 | INFO     | mean y: 2862950.6811788348
[2025-11-19 18:14:04] 2025-11-19 17:12:55,709 | INFO     | intersect: -4920723781.899082
[2025-11-19 18:14:04] 2025-11-19 17:12:55,711 | INFO     | chi2: 17.272847888835944
[2025-11-19 18:14:04] 2025-11-19 17:12:55,711 | INFO     | current chi2=17.272847888835944 (change=15.394285870111425 %)
[2025-11-19 18:14:04] 2025-11-19 17:12:55,711 | INFO     | right removable region: 1492
[2025-11-19 18:14:04] 2025-11-19 17:12:55,713 | INFO     | sum of square deviations: 1031948460085.4291
[2025-11-19 18:14:04] 2025-11-19 17:12:55,800 | INFO     | sum of deviations: 1831549510451.194
[2025-11-19 18:14:04] 2025-11-19 17:12:55,801 | INFO     | mean x: 1763526721.048895
[2025-11-19 18:14:04] 2025-11-19 17:12:55,801 | INFO     | mean y: 2864082.5726724714
[2025-11-19 18:14:04] 2025-11-19 17:12:55,801 | INFO     | intersect: -3127124116.971044
[2025-11-19 18:14:04] 2025-11-19 17:12:55,803 | INFO     | chi2: 16.77359215845351
[2025-11-19 18:14:04] 2025-11-19 17:12:55,803 | INFO     | current chi2=16.77359215845351 (change=17.839735970424414 %)
[2025-11-19 18:14:04] 2025-11-19 17:12:55,803 | INFO     | left removable region: 10
[2025-11-19 18:14:04] 2025-11-19 17:12:55,806 | INFO     | sum of square deviations: 1009307078637.9628
[2025-11-19 18:14:04] 2025-11-19 17:12:55,882 | INFO     | sum of deviations: 2191875100393.562
[2025-11-19 18:14:04] 2025-11-19 17:12:55,882 | INFO     | mean x: 1763526690.5553308
[2025-11-19 18:14:04] 2025-11-19 17:12:55,882 | INFO     | mean y: 2876284.3529014844
[2025-11-19 18:14:04] 2025-11-19 17:12:55,882 | INFO     | intersect: -3826909836.957179
[2025-11-19 18:14:04] 2025-11-19 17:12:55,884 | INFO     | chi2: 12.226476574560095
[2025-11-19 18:14:04] 2025-11-19 17:12:55,884 | INFO     | current memory leak: 2.17 B/s (using 1482 data points, chi2=12.23)
[2025-11-19 18:14:04] 2025-11-19 17:12:55,887 | INFO     | could have reported an average CPU frequency of 1999 MHz (50 samples)
[2025-11-19 18:14:04] 2025-11-19 17:12:55,887 | INFO     | ..............................
[2025-11-19 18:14:04] 2025-11-19 17:12:55,887 | INFO     | . Timing measurements:
[2025-11-19 18:14:04] 2025-11-19 17:12:55,887 | INFO     | . get job = 0 s
[2025-11-19 18:14:04] 2025-11-19 17:12:55,887 | INFO     | . initial setup = 6 s
[2025-11-19 18:14:04] 2025-11-19 17:12:55,887 | INFO     | . payload setup = 151 s
[2025-11-19 18:14:04] 2025-11-19 17:12:55,887 | INFO     | . stage-in = 0 s
[2025-11-19 18:14:04] 2025-11-19 17:12:55,887 | INFO     | . payload execution = 91394 s
[2025-11-19 18:14:04] 2025-11-19 17:12:55,888 | INFO     | . stage-out = 5 s
[2025-11-19 18:14:04] 2025-11-19 17:12:55,888 | INFO     | . log creation = 2 s
[2025-11-19 18:14:04] 2025-11-19 17:12:55,888 | INFO     | ..............................
[2025-11-19 18:14:04] 2025-11-19 17:12:56,023 | INFO     | 
[2025-11-19 18:14:04] 2025-11-19 17:12:56,023 | INFO     | job summary report
[2025-11-19 18:14:04] 2025-11-19 17:12:56,023 | INFO     | --------------------------------------------------
[2025-11-19 18:14:04] 2025-11-19 17:12:56,023 | INFO     | PanDA job id: 6891555525
[2025-11-19 18:14:04] 2025-11-19 17:12:56,023 | INFO     | task id: 47493068
[2025-11-19 18:14:04] 2025-11-19 17:12:56,023 | INFO     | errors: (none)
[2025-11-19 18:14:04] 2025-11-19 17:12:56,023 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-19 18:14:04] 2025-11-19 17:12:56,023 | INFO     | pilot state: finished 
[2025-11-19 18:14:04] 2025-11-19 17:12:56,023 | INFO     | transexitcode: 0
[2025-11-19 18:14:04] 2025-11-19 17:12:56,024 | INFO     | exeerrorcode: 0
[2025-11-19 18:14:04] 2025-11-19 17:12:56,024 | INFO     | exeerrordiag: 
[2025-11-19 18:14:04] 2025-11-19 17:12:56,024 | INFO     | exitcode: 0
[2025-11-19 18:14:04] 2025-11-19 17:12:56,024 | INFO     | exitmsg: OK
[2025-11-19 18:14:04] 2025-11-19 17:12:56,024 | INFO     | cpuconsumptiontime: 342004 s
[2025-11-19 18:14:04] 2025-11-19 17:12:56,024 | INFO     | nevents: 1000
[2025-11-19 18:14:04] 2025-11-19 17:12:56,024 | INFO     | neventsw: 0
[2025-11-19 18:14:04] 2025-11-19 17:12:56,024 | INFO     | pid: 1907
[2025-11-19 18:14:04] 2025-11-19 17:12:56,024 | INFO     | pgrp: 1907
[2025-11-19 18:14:04] 2025-11-19 17:12:56,024 | INFO     | corecount: 8
[2025-11-19 18:14:04] 2025-11-19 17:12:56,024 | INFO     | event service: False
[2025-11-19 18:14:04] 2025-11-19 17:12:56,024 | INFO     | sizes: {0: 2297026, 1: 2297225, 12: 2297225, 23: 2297253, 34: 2297281, 44: 2297309, 55: 2297465, 66: 2297493, 77: 2297521, 87: 2297577, 93: 2297867, 98: 2298175, 9
[2025-11-19 18:14:04] 2025-11-19 17:12:56,025 | INFO     | --------------------------------------------------
[2025-11-19 18:14:04] 2025-11-19 17:12:56,025 | INFO     | 
[2025-11-19 18:14:04] 2025-11-19 17:12:56,025 | INFO     | executing command: ls -lF /var/lib/boinc/slots/11
[2025-11-19 18:14:04] 2025-11-19 17:12:56,533 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-19 18:14:04] 2025-11-19 17:12:56,533 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-19 18:14:04] 2025-11-19 17:12:56,533 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-19 18:14:04] 2025-11-19 17:12:56,533 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-19 18:14:04] 2025-11-19 17:12:56,533 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-19 18:14:04] 2025-11-19 17:12:56,534 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-19 18:14:04] 2025-11-19 17:12:56,534 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-19 18:14:04] 2025-11-19 17:12:56,534 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-19 18:14:04] 2025-11-19 17:12:56,534 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-19 18:14:04] 2025-11-19 17:12:56,534 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-19 18:14:04] 2025-11-19 17:12:56,534 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-19 18:14:04] 2025-11-19 17:12:56,534 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-19 18:14:04] 2025-11-19 17:12:56,534 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-19 18:14:04] 2025-11-19 17:12:56,534 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-19 18:14:04] 2025-11-19 17:12:56,534 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-19 18:14:04] 2025-11-19 17:12:56,534 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-19 18:14:04] 2025-11-19 17:12:56,535 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-19 18:14:04] 2025-11-19 17:12:56,535 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-19 18:14:04] 2025-11-19 17:12:56,535 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-19 18:14:04] 2025-11-19 17:12:56,535 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-19 18:14:04] 2025-11-19 17:12:56,535 | INFO     | job 6891555525 has completed (purged errors)
[2025-11-19 18:14:04] 2025-11-19 17:12:56,535 | INFO     | overall cleanup function is called
[2025-11-19 18:14:04] 2025-11-19 17:12:57,561 | INFO     | --- collectZombieJob: --- 10, [1907]
[2025-11-19 18:14:04] 2025-11-19 17:12:57,562 | INFO     | zombie collector waiting for pid 1907
[2025-11-19 18:14:04] 2025-11-19 17:12:57,562 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-19 18:14:04] 2025-11-19 17:12:57,562 | INFO     | collected zombie processes
[2025-11-19 18:14:04] 2025-11-19 17:12:57,562 | INFO     | will attempt to kill all subprocesses of pid=1907
[2025-11-19 18:14:04] 2025-11-19 17:12:57,709 | INFO     | process IDs to be killed: [1907] (in reverse order)
[2025-11-19 18:14:04] 2025-11-19 17:12:58,648 | WARNING  | found no corresponding commands to process id(s)
[2025-11-19 18:14:04] 2025-11-19 17:12:58,648 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-19 18:14:04] 2025-11-19 17:12:58,658 | INFO     | did not find any defunct processes belonging to 1907
[2025-11-19 18:14:04] 2025-11-19 17:12:58,661 | INFO     | did not find any defunct processes belonging to 1907
[2025-11-19 18:14:04] 2025-11-19 17:12:58,734 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-19 18:14:04] 2025-11-19 17:12:58,734 | INFO     | ready for new job
[2025-11-19 18:14:04] 2025-11-19 17:12:58,734 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-19 18:14:04] 2025-11-19 17:12:58,741 | INFO     | ***************************************
[2025-11-19 18:14:04] 2025-11-19 17:12:58,741 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-19 18:14:04] 2025-11-19 17:12:58,741 | INFO     | ***************************************
[2025-11-19 18:14:04] 2025-11-19 17:12:58,741 | INFO     | 
[2025-11-19 18:14:04] 2025-11-19 17:12:58,742 | INFO     | pilot is running in a VM
[2025-11-19 18:14:04] 2025-11-19 17:12:58,742 | INFO     | architecture information:
[2025-11-19 18:14:04] 2025-11-19 17:12:58,757 | INFO     | executing command: cat /etc/os-release
[2025-11-19 18:14:04] 2025-11-19 17:12:59,017 | INFO     | cat /etc/os-release:
[2025-11-19 18:14:04] NAME="CentOS Linux"
[2025-11-19 18:14:04] VERSION="7 (Core)"
[2025-11-19 18:14:04] ID="centos"
[2025-11-19 18:14:04] ID_LIKE="rhel fedora"
[2025-11-19 18:14:04] VERSION_ID="7"
[2025-11-19 18:14:04] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-19 18:14:04] ANSI_COLOR="0;31"
[2025-11-19 18:14:04] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-19 18:14:04] HOME_URL="https://www.centos.org/"
[2025-11-19 18:14:04] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-19 18:14:04] 
[2025-11-19 18:14:04] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-19 18:14:04] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-19 18:14:04] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-19 18:14:04] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-19 18:14:04] 
[2025-11-19 18:14:04] 2025-11-19 17:12:59,018 | INFO     | ***************************************
[2025-11-19 18:14:04] 2025-11-19 17:12:59,522 | INFO     | executing command: df -mP /var/lib/boinc/slots/11
[2025-11-19 18:14:04] 2025-11-19 17:12:59,823 | INFO     | sufficient remaining disk space (495009660928 B)
[2025-11-19 18:14:04] 2025-11-19 17:12:59,823 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-19 18:14:04] 2025-11-19 17:12:59,824 | INFO     | current server update state: UPDATING_FINAL
[2025-11-19 18:14:04] 2025-11-19 17:12:59,824 | INFO     | update_server=False
[2025-11-19 18:14:04] 2025-11-19 17:12:59,824 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-19 18:14:04] 2025-11-19 17:12:59,824 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-19 18:14:04] 2025-11-19 17:12:59,824 | INFO     | aborting loop
[2025-11-19 18:14:04] 2025-11-19 17:12:59,829 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-19 18:14:04] 2025-11-19 17:13:00,383 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-19 18:14:04] 2025-11-19 17:13:00,799 | INFO     | all data control threads have been joined
[2025-11-19 18:14:04] 2025-11-19 17:13:00,829 | INFO     | [job] job monitor thread has finished
[2025-11-19 18:14:04] 2025-11-19 17:13:00,830 | INFO     | [job] retrieve thread has finished
[2025-11-19 18:14:04] 2025-11-19 17:13:00,856 | INFO     | [payload] validate_pre thread has finished
[2025-11-19 18:14:04] 2025-11-19 17:13:00,946 | INFO     | all job control threads have been joined
[2025-11-19 18:14:04] 2025-11-19 17:13:01,036 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-19 18:14:04] 2025-11-19 17:13:01,057 | INFO     | all payload control threads have been joined
[2025-11-19 18:14:04] 2025-11-19 17:13:01,229 | INFO     | [payload] validate_post thread has finished
[2025-11-19 18:14:04] 2025-11-19 17:13:01,481 | INFO     | [payload] failed_post thread has finished
[2025-11-19 18:14:04] 2025-11-19 17:13:01,520 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-19 18:14:04] 2025-11-19 17:13:01,534 | INFO     | [payload] execute_payloads thread has finished
[2025-11-19 18:14:04] 2025-11-19 17:13:01,805 | INFO     | [data] control thread has finished
[2025-11-19 18:14:04] 2025-11-19 17:13:01,889 | INFO     | [data] copytool_in thread has finished
[2025-11-19 18:14:04] 2025-11-19 17:13:01,952 | INFO     | [job] control thread has finished
[2025-11-19 18:14:04] 2025-11-19 17:13:02,042 | INFO     | [job] queue monitor thread has finished
[2025-11-19 18:14:04] 2025-11-19 17:13:02,063 | INFO     | [payload] control thread has finished
[2025-11-19 18:14:04] 2025-11-19 17:13:02,081 | INFO     | [job] validate thread has finished
[2025-11-19 18:14:04] 2025-11-19 17:13:02,261 | INFO     | [job] create_data_payload thread has finished
[2025-11-19 18:14:04] 2025-11-19 17:13:02,390 | INFO     | [data] copytool_out thread has finished
[2025-11-19 18:14:04] 2025-11-19 17:13:03,841 | INFO     | [data] queue_monitor thread has finished
[2025-11-19 18:14:04] 2025-11-19 17:13:09,873 [wrapper] supervise_pilot (15 min periods counter: 103)
[2025-11-19 18:14:04] 2025-11-19 17:13:28,012 | INFO     | PID=27734 has CPU usage=2.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-19 18:14:04] 2025-11-19 17:13:28,012 | INFO     | .. there are 9 such processes running
[2025-11-19 18:14:04] 2025-11-19 17:13:28,013 | INFO     | found 0 job(s) in 20 queues
[2025-11-19 18:14:04] 2025-11-19 17:13:28,013 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-19 18:14:04] 2025-11-19 17:13:28,013 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-19 18:14:04] 2025-11-19 17:13:51,861 | INFO     | [monitor] cgroup control has ended
[2025-11-19 18:14:04] 2025-11-19 17:13:53,652 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140157196666688)>', '<ExcThread(monitor, started 140156317198080)>']
[2025-11-19 18:14:04] 2025-11-19 17:13:54,169 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-19 18:14:04] 2025-11-19 17:13:54,170 | INFO     | [monitor] control thread has ended
[2025-11-19 18:14:04] 2025-11-19 17:13:58,678 | INFO     | all workflow threads have been joined
[2025-11-19 18:14:04] 2025-11-19 17:13:58,679 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-19 18:14:04] 2025-11-19 17:13:58,679 | INFO     | traces error code: 0
[2025-11-19 18:14:04] 2025-11-19 17:13:58,679 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-19 18:14:04] 2025-11-19 17:13:59,244 [wrapper] ==== pilot stdout END ====
[2025-11-19 18:14:04] 2025-11-19 17:13:59,336 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-19 18:14:04] 2025-11-19 17:13:59,430 [wrapper] pilotpid: 27734
[2025-11-19 18:14:04] 2025-11-19 17:13:59,527 [wrapper] Pilot exit status: 0
[2025-11-19 18:14:04] 2025-11-19 17:13:59,940 [wrapper] pandaids: 6891555525
[2025-11-19 18:14:04] 2025-11-19 17:14:00,974 [wrapper] cleanup supervisor_pilot 12631 27735
[2025-11-19 18:14:04] 2025-11-19 17:14:01,032 [wrapper] Test setup, not cleaning
[2025-11-19 18:14:04] 2025-11-19 17:14:01,082 [wrapper] apfmon messages muted
[2025-11-19 18:14:04] 2025-11-19 17:14:01,151 [wrapper] ==== wrapper stdout END ====
[2025-11-19 18:14:04] 2025-11-19 17:14:01,212 [wrapper] ==== wrapper stderr END ====
[2025-11-19 18:14:04]  *** Error codes and diagnostics ***
[2025-11-19 18:14:04]     "exeErrorCode": 0,
[2025-11-19 18:14:04]     "exeErrorDiag": "",
[2025-11-19 18:14:04]     "pilotErrorCode": 0,
[2025-11-19 18:14:04]     "pilotErrorDiag": "",
[2025-11-19 18:14:04]  *** Listing of results directory ***
[2025-11-19 18:14:04] total 1344408
[2025-11-19 18:14:04] -rw-r--r--. 1 boinc boinc    576529 Nov 18 16:15 pilot3.tar.gz
[2025-11-19 18:14:04] -rw-r--r--. 1 boinc boinc      5112 Nov 18 16:20 queuedata.json
[2025-11-19 18:14:04] -rwx------. 1 boinc boinc     36292 Nov 18 16:20 runpilot2-wrapper.sh
[2025-11-19 18:14:04] -rw-r--r--. 1 boinc boinc       100 Nov 18 16:37 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-19 18:14:04] -rwxr-xr-x. 1 boinc boinc      7986 Nov 18 16:37 run_atlas
[2025-11-19 18:14:04] -rw-r--r--. 1 boinc boinc       105 Nov 18 16:37 job.xml
[2025-11-19 18:14:04] -rw-r--r--. 2 boinc boinc 410080363 Nov 18 16:37 EVNT.47493065._000030.pool.root.1
[2025-11-19 18:14:04] -rw-r--r--. 2 boinc boinc    590094 Nov 18 16:37 input.tar.gz
[2025-11-19 18:14:04] -rw-r--r--. 1 boinc boinc      6387 Nov 18 16:37 init_data.xml
[2025-11-19 18:14:04] -rw-r--r--. 2 boinc boinc     15120 Nov 18 16:37 start_atlas.sh
[2025-11-19 18:14:04] drwxrwx--x. 2 boinc boinc        68 Nov 18 16:37 shared
[2025-11-19 18:14:04] -rw-r--r--. 1 boinc boinc         0 Nov 18 16:37 boinc_lockfile
[2025-11-19 18:14:04] -rw-r--r--. 1 boinc boinc      2771 Nov 18 16:38 pandaJob.out
[2025-11-19 18:14:04] -rw-------. 1 boinc boinc    992766 Nov 18 16:42 agis_schedconf.cvmfs.json
[2025-11-19 18:14:04] drwx------. 5 boinc boinc      4096 Nov 18 16:42 pilot3
[2025-11-19 18:14:04] -rw-r--r--. 1 boinc boinc       533 Nov 19 17:44 boinc_task_state.xml
[2025-11-19 18:14:04] -rw-------. 1 boinc boinc 933163419 Nov 19 18:09 HITS.47493068._000296.pool.root.1
[2025-11-19 18:14:04] -rw-------. 1 boinc boinc      1032 Nov 19 18:11 memory_monitor_summary.json
[2025-11-19 18:14:04] -rw-------. 1 boinc boinc   1525063 Nov 19 18:11 agis_ddmendpoints.agis.ALL.json
[2025-11-19 18:14:04] -rw-------. 1 boinc boinc   2558883 Nov 19 18:11 log.47493068._000296.job.log.tgz.1
[2025-11-19 18:14:04] -rw-------. 1 boinc boinc      7960 Nov 19 18:12 heartbeat.json
[2025-11-19 18:14:04] -rw-------. 1 boinc boinc        95 Nov 19 18:13 pilot_heartbeat.json
[2025-11-19 18:14:04] -rw-r--r--. 1 boinc boinc        29 Nov 19 18:13 wrapper_checkpoint.txt
[2025-11-19 18:14:04] -rw-r--r--. 1 boinc boinc      8192 Nov 19 18:13 boinc_mmap_file
[2025-11-19 18:14:04] -rw-------. 1 boinc boinc      4885 Nov 19 18:13 pilotlog.txt
[2025-11-19 18:14:04] -rw-------. 1 boinc boinc  12200042 Nov 19 18:14 log.47493068._000296.job.log.1
[2025-11-19 18:14:04] -rw-------. 1 boinc boinc       353 Nov 19 18:14 output.list
[2025-11-19 18:14:04] -rw-r--r--. 1 boinc boinc       620 Nov 19 18:14 runtime_log
[2025-11-19 18:14:04] -rw-------. 1 boinc boinc  14776320 Nov 19 18:14 result.tar.gz
[2025-11-19 18:14:04] -rw-------. 1 boinc boinc       662 Nov 19 18:14 xHcNDmYgcf8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmwHFKDm4a90So.diag
[2025-11-19 18:14:04] -rw-r--r--. 1 boinc boinc      8717 Nov 19 18:14 runtime_log.err
[2025-11-19 18:14:04] -rw-r--r--. 1 boinc boinc     21427 Nov 19 18:14 stderr.txt
[2025-11-19 18:14:04] HITS file was successfully produced:
[2025-11-19 18:14:04] -rw-------. 1 boinc boinc 933163419 Nov 19 18:09 shared/HITS.pool.root.1
[2025-11-19 18:14:04]  *** Contents of shared directory: ***
[2025-11-19 18:14:04] total 1326796
[2025-11-19 18:14:04] -rw-r--r--. 2 boinc boinc 410080363 Nov 18 16:37 ATLAS.root_0
[2025-11-19 18:14:04] -rw-r--r--. 2 boinc boinc    590094 Nov 18 16:37 input.tar.gz
[2025-11-19 18:14:04] -rw-r--r--. 2 boinc boinc     15120 Nov 18 16:37 start_atlas.sh
[2025-11-19 18:14:04] -rw-------. 1 boinc boinc 933163419 Nov 19 18:09 HITS.pool.root.1
[2025-11-19 18:14:04] -rw-------. 1 boinc boinc  14776320 Nov 19 18:14 result.tar.gz
18:14:05 (23573): run_atlas exited; CPU time 342758.026677
18:14:05 (23573): called boinc_finish(0)

</stderr_txt>
]]>

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