Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
20:09:48 (16074): wrapper (7.7.26015): starting
20:09:48 (16074): wrapper: running run_atlas (--nthreads 8)
[2025-11-20 20:09:48] Arguments: --nthreads 8
[2025-11-20 20:09:48] Threads: 8
[2025-11-20 20:09:48] Checking for CVMFS
[2025-11-20 20:09:49] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-20 20:09:50] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-20 20:09:50] Running cvmfs_config stat atlas.cern.ch
[2025-11-20 20:09:51] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-20 20:09:51] 2.11.2.0 18594 75743 96580 153088 0 307 20275079 25165824 4620 130560 2 21690627 99.894 11675426 2211 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-11-20 20:09:51] CVMFS is ok
[2025-11-20 20:09:51] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-20 20:09:51] Checking for apptainer binary...
[2025-11-20 20:09:51] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-20 20:09:51] Running /usr/bin/apptainer --version
[2025-11-20 20:09:51] apptainer version 1.3.2-1.el7
[2025-11-20 20:09:51] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-20 20:09:56] cg-vwn256.simple-grid.lan
[2025-11-20 20:09:56] apptainer works
[2025-11-20 20:09:57] Set ATHENA_PROC_NUMBER=8
[2025-11-20 20:09:57] Set ATHENA_CORE_NUMBER=8
[2025-11-20 20:09:57] Starting ATLAS job with PandaID=6891555871
[2025-11-20 20:09:57] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/11 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-21 21:01:36]  *** The last 200 lines of the pilot log: ***
[2025-11-21 21:01:36] 2025-11-21 20:00:56,911 | INFO     | time since job start (89226s) is within the limit (172800.0s)
[2025-11-21 21:01:36] 2025-11-21 20:00:56,957 | INFO     | sum of deviations: 3662176052423.526
[2025-11-21 21:01:36] 2025-11-21 20:00:56,958 | INFO     | mean x: 1763710885.641678
[2025-11-21 21:01:36] 2025-11-21 20:00:56,958 | INFO     | mean y: 2883469.5192572214
[2025-11-21 21:01:36] 2025-11-21 20:00:56,958 | INFO     | intersect: -6773466690.961601
[2025-11-21 21:01:36] 2025-11-21 20:00:56,960 | INFO     | chi2: 15.387503337200833
[2025-11-21 21:01:36] 2025-11-21 20:00:56,962 | INFO     | sum of square deviations: 943371899798.2761
[2025-11-21 21:01:36] 2025-11-21 20:00:57,018 | INFO     | sum of deviations: 4159945288128.0786
[2025-11-21 21:01:36] 2025-11-21 20:00:57,018 | INFO     | mean x: 1763710733.1456177
[2025-11-21 21:01:36] 2025-11-21 20:00:57,018 | INFO     | mean y: 2891215.729468599
[2025-11-21 21:01:36] 2025-11-21 20:00:57,018 | INFO     | intersect: -7774465896.072262
[2025-11-21 21:01:36] 2025-11-21 20:00:57,020 | INFO     | chi2: 12.229451581895836
[2025-11-21 21:01:36] 2025-11-21 20:00:57,020 | INFO     | current chi2=12.229451581895836 (change=20.523483804354996 %)
[2025-11-21 21:01:36] 2025-11-21 20:00:57,020 | INFO     | right removable region: 1448
[2025-11-21 21:01:36] 2025-11-21 20:00:57,022 | INFO     | sum of square deviations: 943370887198.2742
[2025-11-21 21:01:36] 2025-11-21 20:00:57,079 | INFO     | sum of deviations: 3042968160833.7993
[2025-11-21 21:01:36] 2025-11-21 20:00:57,080 | INFO     | mean x: 1763711038.1456177
[2025-11-21 21:01:36] 2025-11-21 20:00:57,080 | INFO     | mean y: 2893104.835058661
[2025-11-21 21:01:36] 2025-11-21 20:00:57,080 | INFO     | intersect: -5686191227.550368
[2025-11-21 21:01:36] 2025-11-21 20:00:57,082 | INFO     | chi2: 10.588454218708597
[2025-11-21 21:01:36] 2025-11-21 20:00:57,082 | INFO     | current chi2=10.588454218708597 (change=31.187964761574115 %)
[2025-11-21 21:01:36] 2025-11-21 20:00:57,084 | INFO     | sum of square deviations: 933638272836.69
[2025-11-21 21:01:36] 2025-11-21 20:00:57,142 | INFO     | sum of deviations: 2510392253470.2476
[2025-11-21 21:01:36] 2025-11-21 20:00:57,142 | INFO     | mean x: 1763711190.6495845
[2025-11-21 21:01:36] 2025-11-21 20:00:57,142 | INFO     | mean y: 2901449.496537396
[2025-11-21 21:01:36] 2025-11-21 20:00:57,142 | INFO     | intersect: -4739413683.872006
[2025-11-21 21:01:36] 2025-11-21 20:00:57,144 | INFO     | chi2: 7.135798937787286
[2025-11-21 21:01:36] 2025-11-21 20:00:57,144 | INFO     | current chi2=7.135798937787286 (change=32.60773678202112 %)
[2025-11-21 21:01:36] 2025-11-21 20:00:57,146 | INFO     | sum of square deviations: 923972910366.3652
[2025-11-21 21:01:36] 2025-11-21 20:00:57,214 | INFO     | sum of deviations: 2139860119633.0938
[2025-11-21 21:01:36] 2025-11-21 20:00:57,215 | INFO     | mean x: 1763711343.152884
[2025-11-21 21:01:36] 2025-11-21 20:00:57,215 | INFO     | mean y: 2907291.8450312717
[2025-11-21 21:01:36] 2025-11-21 20:00:57,215 | INFO     | intersect: -4081731471.2772613
[2025-11-21 21:01:36] 2025-11-21 20:00:57,216 | INFO     | chi2: 5.325938954153704
[2025-11-21 21:01:36] 2025-11-21 20:00:57,217 | INFO     | current chi2=5.325938954153704 (change=25.36310228767173 %)
[2025-11-21 21:01:36] 2025-11-21 20:00:57,219 | INFO     | sum of square deviations: 914374918283.0547
[2025-11-21 21:01:36] 2025-11-21 20:00:57,273 | INFO     | sum of deviations: 2035182566908.728
[2025-11-21 21:01:36] 2025-11-21 20:00:57,273 | INFO     | mean x: 1763711495.6527197
[2025-11-21 21:01:36] 2025-11-21 20:00:57,274 | INFO     | mean y: 2908954.8528591353
[2025-11-21 21:01:36] 2025-11-21 20:00:57,274 | INFO     | intersect: -3922696195.9850307
[2025-11-21 21:01:36] 2025-11-21 20:00:57,275 | INFO     | chi2: 5.243644058973912
[2025-11-21 21:01:36] 2025-11-21 20:00:57,276 | INFO     | current chi2=5.243644058973912 (change=1.5451715817285276 %)
[2025-11-21 21:01:36] 2025-11-21 20:00:57,276 | INFO     | left removable region: 40
[2025-11-21 21:01:36] 2025-11-21 20:00:57,278 | INFO     | sum of square deviations: 865535783016.998
[2025-11-21 21:01:36] 2025-11-21 20:00:57,330 | INFO     | sum of deviations: 2389928094121.4155
[2025-11-21 21:01:36] 2025-11-21 20:00:57,330 | INFO     | mean x: 1763711922.6576705
[2025-11-21 21:01:36] 2025-11-21 20:00:57,331 | INFO     | mean y: 2923120.901278409
[2025-11-21 21:01:36] 2025-11-21 20:00:57,331 | INFO     | intersect: -4867060023.185191
[2025-11-21 21:01:36] 2025-11-21 20:00:57,333 | INFO     | chi2: 1.0021417471272427
[2025-11-21 21:01:36] 2025-11-21 20:00:57,333 | INFO     | current memory leak: 2.76 B/s (using 1408 data points, chi2=1.00)
[2025-11-21 21:01:36] 2025-11-21 20:00:57,335 | INFO     | could have reported an average CPU frequency of 1999 MHz (49 samples)
[2025-11-21 21:01:36] 2025-11-21 20:00:57,335 | INFO     | ..............................
[2025-11-21 21:01:36] 2025-11-21 20:00:57,336 | INFO     | . Timing measurements:
[2025-11-21 21:01:36] 2025-11-21 20:00:57,336 | INFO     | . get job = 0 s
[2025-11-21 21:01:36] 2025-11-21 20:00:57,336 | INFO     | . initial setup = 17 s
[2025-11-21 21:01:36] 2025-11-21 20:00:57,336 | INFO     | . payload setup = 172 s
[2025-11-21 21:01:36] 2025-11-21 20:00:57,336 | INFO     | . stage-in = 0 s
[2025-11-21 21:01:36] 2025-11-21 20:00:57,336 | INFO     | . payload execution = 88823 s
[2025-11-21 21:01:36] 2025-11-21 20:00:57,336 | INFO     | . stage-out = 3 s
[2025-11-21 21:01:36] 2025-11-21 20:00:57,336 | INFO     | . log creation = 1 s
[2025-11-21 21:01:36] 2025-11-21 20:00:57,336 | INFO     | ..............................
[2025-11-21 21:01:36] 2025-11-21 20:00:57,911 | INFO     | 
[2025-11-21 21:01:36] 2025-11-21 20:00:57,912 | INFO     | job summary report
[2025-11-21 21:01:36] 2025-11-21 20:00:57,912 | INFO     | --------------------------------------------------
[2025-11-21 21:01:36] 2025-11-21 20:00:57,912 | INFO     | PanDA job id: 6891555871
[2025-11-21 21:01:36] 2025-11-21 20:00:57,912 | INFO     | task id: 47493068
[2025-11-21 21:01:36] 2025-11-21 20:00:57,912 | INFO     | errors: (none)
[2025-11-21 21:01:36] 2025-11-21 20:00:57,912 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-21 21:01:36] 2025-11-21 20:00:57,912 | INFO     | pilot state: finished 
[2025-11-21 21:01:36] 2025-11-21 20:00:57,912 | INFO     | transexitcode: 0
[2025-11-21 21:01:36] 2025-11-21 20:00:57,912 | INFO     | exeerrorcode: 0
[2025-11-21 21:01:36] 2025-11-21 20:00:57,912 | INFO     | exeerrordiag: 
[2025-11-21 21:01:36] 2025-11-21 20:00:57,912 | INFO     | exitcode: 0
[2025-11-21 21:01:36] 2025-11-21 20:00:57,913 | INFO     | exitmsg: OK
[2025-11-21 21:01:36] 2025-11-21 20:00:57,913 | INFO     | cpuconsumptiontime: 336636 s
[2025-11-21 21:01:36] 2025-11-21 20:00:57,913 | INFO     | nevents: 1000
[2025-11-21 21:01:36] 2025-11-21 20:00:57,913 | INFO     | neventsw: 0
[2025-11-21 21:01:36] 2025-11-21 20:00:57,913 | INFO     | pid: 26508
[2025-11-21 21:01:36] 2025-11-21 20:00:57,913 | INFO     | pgrp: 26508
[2025-11-21 21:01:36] 2025-11-21 20:00:57,913 | INFO     | corecount: 8
[2025-11-21 21:01:36] 2025-11-21 20:00:57,913 | INFO     | event service: False
[2025-11-21 21:01:36] 2025-11-21 20:00:57,913 | INFO     | sizes: {0: 2298566, 1: 2298821, 12: 2298821, 23: 2298849, 33: 2298877, 44: 2298933, 55: 2299089, 66: 2299117, 77: 2299145, 87: 2299201, 98: 2299229, 103: 2299799, 
[2025-11-21 21:01:36] 2025-11-21 20:00:57,913 | INFO     | --------------------------------------------------
[2025-11-21 21:01:36] 2025-11-21 20:00:57,914 | INFO     | 
[2025-11-21 21:01:36] 2025-11-21 20:00:57,914 | INFO     | executing command: ls -lF /var/lib/boinc/slots/11
[2025-11-21 21:01:36] 2025-11-21 20:00:57,998 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-21 21:01:36] 2025-11-21 20:00:57,998 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-21 21:01:36] 2025-11-21 20:00:57,998 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-21 21:01:36] 2025-11-21 20:00:57,998 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-21 21:01:36] 2025-11-21 20:00:57,999 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-21 21:01:36] 2025-11-21 20:00:57,999 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-21 21:01:36] 2025-11-21 20:00:57,999 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-21 21:01:36] 2025-11-21 20:00:57,999 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-21 21:01:36] 2025-11-21 20:00:57,999 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-21 21:01:36] 2025-11-21 20:00:57,999 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-21 21:01:36] 2025-11-21 20:00:57,999 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-21 21:01:36] 2025-11-21 20:00:57,999 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-21 21:01:36] 2025-11-21 20:00:57,999 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-21 21:01:36] 2025-11-21 20:00:58,000 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-21 21:01:36] 2025-11-21 20:00:58,000 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-21 21:01:36] 2025-11-21 20:00:58,000 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-21 21:01:36] 2025-11-21 20:00:58,000 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-21 21:01:36] 2025-11-21 20:00:58,000 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-21 21:01:36] 2025-11-21 20:00:58,000 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-21 21:01:36] 2025-11-21 20:00:58,000 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-21 21:01:36] 2025-11-21 20:00:58,000 | INFO     | job 6891555871 has completed (purged errors)
[2025-11-21 21:01:36] 2025-11-21 20:00:58,001 | INFO     | overall cleanup function is called
[2025-11-21 21:01:36] 2025-11-21 20:00:58,085 | INFO     | PID=19900 has CPU usage=16.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-11-21 21:01:36] 2025-11-21 20:00:58,085 | INFO     | .. there are 9 such processes running
[2025-11-21 21:01:36] 2025-11-21 20:00:59,021 | INFO     | --- collectZombieJob: --- 10, [26508]
[2025-11-21 21:01:36] 2025-11-21 20:00:59,021 | INFO     | zombie collector waiting for pid 26508
[2025-11-21 21:01:36] 2025-11-21 20:00:59,021 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-21 21:01:36] 2025-11-21 20:00:59,021 | INFO     | collected zombie processes
[2025-11-21 21:01:36] 2025-11-21 20:00:59,021 | INFO     | will attempt to kill all subprocesses of pid=26508
[2025-11-21 21:01:36] 2025-11-21 20:00:59,131 | INFO     | process IDs to be killed: [26508] (in reverse order)
[2025-11-21 21:01:36] 2025-11-21 20:00:59,204 | WARNING  | found no corresponding commands to process id(s)
[2025-11-21 21:01:36] 2025-11-21 20:00:59,204 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-21 21:01:36] 2025-11-21 20:00:59,208 | INFO     | did not find any defunct processes belonging to 26508
[2025-11-21 21:01:36] 2025-11-21 20:00:59,211 | INFO     | did not find any defunct processes belonging to 26508
[2025-11-21 21:01:36] 2025-11-21 20:00:59,214 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-21 21:01:36] 2025-11-21 20:00:59,214 | INFO     | ready for new job
[2025-11-21 21:01:36] 2025-11-21 20:00:59,214 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-21 21:01:36] 2025-11-21 20:00:59,221 | INFO     | ***************************************
[2025-11-21 21:01:36] 2025-11-21 20:00:59,221 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-21 21:01:36] 2025-11-21 20:00:59,221 | INFO     | ***************************************
[2025-11-21 21:01:36] 2025-11-21 20:00:59,221 | INFO     | 
[2025-11-21 21:01:36] 2025-11-21 20:00:59,222 | INFO     | pilot is running in a VM
[2025-11-21 21:01:36] 2025-11-21 20:00:59,222 | INFO     | architecture information:
[2025-11-21 21:01:36] 2025-11-21 20:00:59,223 | INFO     | executing command: cat /etc/os-release
[2025-11-21 21:01:36] 2025-11-21 20:00:59,262 | INFO     | cat /etc/os-release:
[2025-11-21 21:01:36] NAME="CentOS Linux"
[2025-11-21 21:01:36] VERSION="7 (Core)"
[2025-11-21 21:01:36] ID="centos"
[2025-11-21 21:01:36] ID_LIKE="rhel fedora"
[2025-11-21 21:01:36] VERSION_ID="7"
[2025-11-21 21:01:36] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-21 21:01:36] ANSI_COLOR="0;31"
[2025-11-21 21:01:36] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-21 21:01:36] HOME_URL="https://www.centos.org/"
[2025-11-21 21:01:36] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-21 21:01:36] 
[2025-11-21 21:01:36] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-21 21:01:36] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-21 21:01:36] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-21 21:01:36] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-21 21:01:36] 
[2025-11-21 21:01:36] 2025-11-21 20:00:59,262 | INFO     | ***************************************
[2025-11-21 21:01:36] 2025-11-21 20:00:59,767 | INFO     | executing command: df -mP /var/lib/boinc/slots/11
[2025-11-21 21:01:36] 2025-11-21 20:00:59,801 | INFO     | sufficient remaining disk space (495028535296 B)
[2025-11-21 21:01:36] 2025-11-21 20:00:59,802 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-21 21:01:36] 2025-11-21 20:00:59,802 | INFO     | current server update state: UPDATING_FINAL
[2025-11-21 21:01:36] 2025-11-21 20:00:59,802 | INFO     | update_server=False
[2025-11-21 21:01:36] 2025-11-21 20:00:59,802 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-21 21:01:36] 2025-11-21 20:00:59,803 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-21 21:01:36] 2025-11-21 20:00:59,807 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-21 21:01:36] 2025-11-21 20:00:59,808 | INFO     | aborting loop
[2025-11-21 21:01:36] 2025-11-21 20:00:59,808 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-21 21:01:36] 2025-11-21 20:01:00,113 | INFO     | all data control threads have been joined
[2025-11-21 21:01:36] 2025-11-21 20:01:00,694 | INFO     | all payload control threads have been joined
[2025-11-21 21:01:36] 2025-11-21 20:01:00,808 | INFO     | [job] retrieve thread has finished
[2025-11-21 21:01:36] 2025-11-21 20:01:00,813 | INFO     | [job] job monitor thread has finished
[2025-11-21 21:01:36] 2025-11-21 20:01:00,899 | INFO     | all job control threads have been joined
[2025-11-21 21:01:36] 2025-11-21 20:01:01,120 | INFO     | [data] control thread has finished
[2025-11-21 21:01:36] 2025-11-21 20:01:01,190 | INFO     | [payload] validate_post thread has finished
[2025-11-21 21:01:36] 2025-11-21 20:01:01,192 | INFO     | [payload] execute_payloads thread has finished
[2025-11-21 21:01:36] 2025-11-21 20:01:01,193 | INFO     | [data] copytool_in thread has finished
[2025-11-21 21:01:36] 2025-11-21 20:01:01,224 | INFO     | [job] create_data_payload thread has finished
[2025-11-21 21:01:36] 2025-11-21 20:01:01,447 | INFO     | [payload] validate_pre thread has finished
[2025-11-21 21:01:36] 2025-11-21 20:01:01,685 | INFO     | [job] validate thread has finished
[2025-11-21 21:01:36] 2025-11-21 20:01:01,700 | INFO     | [payload] control thread has finished
[2025-11-21 21:01:36] 2025-11-21 20:01:01,810 | INFO     | [data] copytool_out thread has finished
[2025-11-21 21:01:36] 2025-11-21 20:01:01,858 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-21 21:01:36] 2025-11-21 20:01:01,906 | INFO     | [job] control thread has finished
[2025-11-21 21:01:36] 2025-11-21 20:01:02,069 | INFO     | [payload] failed_post thread has finished
[2025-11-21 21:01:36] 2025-11-21 20:01:02,475 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-21 21:01:36] 2025-11-21 20:01:03,481 | INFO     | [job] queue monitor thread has finished
[2025-11-21 21:01:36] 2025-11-21 20:01:03,819 | INFO     | [data] queue_monitor thread has finished
[2025-11-21 21:01:36] 2025-11-21 20:01:24,899 | INFO     | [monitor] cgroup control has ended
[2025-11-21 21:01:36] 2025-11-21 20:01:26,593 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139740928739136)>', '<ExcThread(monitor, started 139740099630848)>']
[2025-11-21 21:01:36] 2025-11-21 20:01:30,268 | INFO     | PID=19900 has CPU usage=1.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-21 21:01:36] 2025-11-21 20:01:30,268 | INFO     | .. there are 9 such processes running
[2025-11-21 21:01:36] 2025-11-21 20:01:30,269 | INFO     | found 0 job(s) in 20 queues
[2025-11-21 21:01:36] 2025-11-21 20:01:30,269 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-21 21:01:36] 2025-11-21 20:01:30,270 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-21 21:01:36] 2025-11-21 20:01:30,270 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-21 21:01:36] 2025-11-21 20:01:30,270 | INFO     | [monitor] control thread has ended
[2025-11-21 21:01:36] 2025-11-21 20:01:31,619 | INFO     | all workflow threads have been joined
[2025-11-21 21:01:36] 2025-11-21 20:01:31,620 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-21 21:01:36] 2025-11-21 20:01:31,620 | INFO     | traces error code: 0
[2025-11-21 21:01:36] 2025-11-21 20:01:31,620 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-21 21:01:36] 2025-11-21 20:01:32,021 [wrapper] ==== pilot stdout END ====
[2025-11-21 21:01:36] 2025-11-21 20:01:32,118 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-21 21:01:36] 2025-11-21 20:01:32,222 [wrapper] pilotpid: 19900
[2025-11-21 21:01:36] 2025-11-21 20:01:32,293 [wrapper] Pilot exit status: 0
[2025-11-21 21:01:36] 2025-11-21 20:01:32,645 [wrapper] pandaids: 6891555871
[2025-11-21 21:01:36] 2025-11-21 20:01:33,494 [wrapper] cleanup supervisor_pilot 30242 19901
[2025-11-21 21:01:36] 2025-11-21 20:01:33,646 [wrapper] Test setup, not cleaning
[2025-11-21 21:01:36] 2025-11-21 20:01:33,745 [wrapper] apfmon messages muted
[2025-11-21 21:01:36] 2025-11-21 20:01:33,822 [wrapper] ==== wrapper stdout END ====
[2025-11-21 21:01:36] 2025-11-21 20:01:33,910 [wrapper] ==== wrapper stderr END ====
[2025-11-21 21:01:36]  *** Error codes and diagnostics ***
[2025-11-21 21:01:36]     "exeErrorCode": 0,
[2025-11-21 21:01:36]     "exeErrorDiag": "",
[2025-11-21 21:01:36]     "pilotErrorCode": 0,
[2025-11-21 21:01:36]     "pilotErrorDiag": "",
[2025-11-21 21:01:36]  *** Listing of results directory ***
[2025-11-21 21:01:36] total 1335992
[2025-11-21 21:01:36] -rw-r--r--. 1 boinc boinc    576529 Nov 18 16:15 pilot3.tar.gz
[2025-11-21 21:01:36] -rw-r--r--. 1 boinc boinc      5112 Nov 18 16:20 queuedata.json
[2025-11-21 21:01:36] -rwx------. 1 boinc boinc     36292 Nov 18 16:21 runpilot2-wrapper.sh
[2025-11-21 21:01:36] -rw-r--r--. 1 boinc boinc       100 Nov 20 20:09 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-21 21:01:36] -rwxr-xr-x. 1 boinc boinc      7986 Nov 20 20:09 run_atlas
[2025-11-21 21:01:36] -rw-r--r--. 1 boinc boinc       105 Nov 20 20:09 job.xml
[2025-11-21 21:01:36] -rw-r--r--. 1 boinc boinc      6388 Nov 20 20:09 init_data.xml
[2025-11-21 21:01:36] -rw-r--r--. 2 boinc boinc 410504186 Nov 20 20:09 EVNT.47493065._000042.pool.root.1
[2025-11-21 21:01:36] -rw-r--r--. 2 boinc boinc     15120 Nov 20 20:09 start_atlas.sh
[2025-11-21 21:01:36] drwxrwx--x. 2 boinc boinc        68 Nov 20 20:09 shared
[2025-11-21 21:01:36] -rw-r--r--. 2 boinc boinc    590100 Nov 20 20:09 input.tar.gz
[2025-11-21 21:01:36] -rw-r--r--. 1 boinc boinc         0 Nov 20 20:09 boinc_lockfile
[2025-11-21 21:01:36] -rw-r--r--. 1 boinc boinc      2771 Nov 20 20:09 pandaJob.out
[2025-11-21 21:01:36] -rw-------. 1 boinc boinc    989440 Nov 20 20:13 agis_schedconf.cvmfs.json
[2025-11-21 21:01:36] drwx------. 5 boinc boinc      4096 Nov 20 20:13 pilot3
[2025-11-21 21:01:36] -rw-r--r--. 1 boinc boinc       533 Nov 21 20:46 boinc_task_state.xml
[2025-11-21 21:01:36] -rw-------. 1 boinc boinc 924761412 Nov 21 20:59 HITS.47493068._000414.pool.root.1
[2025-11-21 21:01:36] -rw-------. 1 boinc boinc      1033 Nov 21 21:00 memory_monitor_summary.json
[2025-11-21 21:01:36] -rw-------. 1 boinc boinc   1526164 Nov 21 21:00 agis_ddmendpoints.agis.ALL.json
[2025-11-21 21:01:36] -rw-------. 1 boinc boinc   2538559 Nov 21 21:00 log.47493068._000414.job.log.tgz.1
[2025-11-21 21:01:36] -rw-------. 1 boinc boinc      8638 Nov 21 21:00 heartbeat.json
[2025-11-21 21:01:36] -rw-r--r--. 1 boinc boinc      8192 Nov 21 21:01 boinc_mmap_file
[2025-11-21 21:01:36] -rw-r--r--. 1 boinc boinc        29 Nov 21 21:01 wrapper_checkpoint.txt
[2025-11-21 21:01:36] -rw-------. 1 boinc boinc        95 Nov 21 21:01 pilot_heartbeat.json
[2025-11-21 21:01:36] -rw-------. 1 boinc boinc      4885 Nov 21 21:01 pilotlog.txt
[2025-11-21 21:01:36] -rw-------. 1 boinc boinc  11903513 Nov 21 21:01 log.47493068._000414.job.log.1
[2025-11-21 21:01:36] -rw-------. 1 boinc boinc       353 Nov 21 21:01 output.list
[2025-11-21 21:01:36] -rw-r--r--. 1 boinc boinc       620 Nov 21 21:01 runtime_log
[2025-11-21 21:01:36] -rw-------. 1 boinc boinc  14458880 Nov 21 21:01 result.tar.gz
[2025-11-21 21:01:36] -rw-------. 1 boinc boinc       662 Nov 21 21:01 eR3KDmUhcf8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmwBFKDmdLWeon.diag
[2025-11-21 21:01:36] -rw-r--r--. 1 boinc boinc      8717 Nov 21 21:01 runtime_log.err
[2025-11-21 21:01:36] -rw-r--r--. 1 boinc boinc     20922 Nov 21 21:01 stderr.txt
[2025-11-21 21:01:36] HITS file was successfully produced:
[2025-11-21 21:01:36] -rw-------. 1 boinc boinc 924761412 Nov 21 20:59 shared/HITS.pool.root.1
[2025-11-21 21:01:36]  *** Contents of shared directory: ***
[2025-11-21 21:01:36] total 1318688
[2025-11-21 21:01:36] -rw-r--r--. 2 boinc boinc 410504186 Nov 20 20:09 ATLAS.root_0
[2025-11-21 21:01:36] -rw-r--r--. 2 boinc boinc     15120 Nov 20 20:09 start_atlas.sh
[2025-11-21 21:01:36] -rw-r--r--. 2 boinc boinc    590100 Nov 20 20:09 input.tar.gz
[2025-11-21 21:01:36] -rw-------. 1 boinc boinc 924761412 Nov 21 20:59 HITS.pool.root.1
[2025-11-21 21:01:36] -rw-------. 1 boinc boinc  14458880 Nov 21 21:01 result.tar.gz
21:01:38 (16074): run_atlas exited; CPU time 337241.663149
21:01:38 (16074): called boinc_finish(0)

</stderr_txt>
]]>

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