Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
19:55:31 (26720): wrapper (7.7.26015): starting
19:55:31 (26720): wrapper: running run_atlas (--nthreads 8)
[2025-11-21 19:55:31] Arguments: --nthreads 8
[2025-11-21 19:55:31] Threads: 8
[2025-11-21 19:55:31] Checking for CVMFS
[2025-11-21 19:55:32] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-21 19:55:33] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-21 19:55:33] Running cvmfs_config stat atlas.cern.ch
[2025-11-21 19:55:35] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-21 19:55:35] 2.11.2.0 21240 278392 144156 153128 3 85 21267702 25165825 4632 130560 105 130089695 99.876 79794554 3111 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-11-21 19:55:35] CVMFS is ok
[2025-11-21 19:55:35] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-21 19:55:35] Checking for apptainer binary...
[2025-11-21 19:55:35] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-21 19:55:35] Running /usr/bin/apptainer --version
[2025-11-21 19:55:35] apptainer version 1.3.2-1.el7
[2025-11-21 19:55:35] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-21 19:55:42] cg-vwn384.simple-grid.lan
[2025-11-21 19:55:42] apptainer works
[2025-11-21 19:55:42] Set ATHENA_PROC_NUMBER=8
[2025-11-21 19:55:42] Set ATHENA_CORE_NUMBER=8
[2025-11-21 19:55:42] Starting ATLAS job with PandaID=6891555422
[2025-11-21 19:55:42] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/10 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-22 21:39:13]  *** The last 200 lines of the pilot log: ***
[2025-11-22 21:39:13] 2025-11-22 20:37:54,398 | INFO     | time since job start (92314s) is within the limit (172800.0s)
[2025-11-22 21:39:13] 2025-11-22 20:37:56,354 | INFO     | monitor loop #6201: job 0:6891555422 is in state 'finished'
[2025-11-22 21:39:13] 2025-11-22 20:37:56,354 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-22 21:39:13] 2025-11-22 20:37:56,412 | INFO     | time since job start (92316s) is within the limit (172800.0s)
[2025-11-22 21:39:13] 2025-11-22 20:37:58,421 | INFO     | time since job start (92318s) is within the limit (172800.0s)
[2025-11-22 21:39:13] 2025-11-22 20:37:58,861 | INFO     | monitor loop #6202: job 0:6891555422 is in state 'finished'
[2025-11-22 21:39:13] 2025-11-22 20:37:58,862 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-22 21:39:13] 2025-11-22 20:38:00,429 | INFO     | time since job start (92320s) is within the limit (172800.0s)
[2025-11-22 21:39:13] 2025-11-22 20:38:01,376 | INFO     | monitor loop #6203: job 0:6891555422 is in state 'finished'
[2025-11-22 21:39:13] 2025-11-22 20:38:01,377 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-22 21:39:13] 2025-11-22 20:38:02,435 | INFO     | time since job start (92322s) is within the limit (172800.0s)
[2025-11-22 21:39:13] 2025-11-22 20:38:03,881 | INFO     | monitor loop #6204: job 0:6891555422 is in state 'finished'
[2025-11-22 21:39:13] 2025-11-22 20:38:03,881 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-22 21:39:13] 2025-11-22 20:38:04,449 | INFO     | time since job start (92324s) is within the limit (172800.0s)
[2025-11-22 21:39:13] 2025-11-22 20:38:04,625 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-22 21:39:13] 2025-11-22 20:38:04,626 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2025-11-22 21:39:13] 2025-11-22 20:38:04,628 | INFO     | using path: /var/lib/boinc/slots/10/PanDA_Pilot-6891555422/memory_monitor_summary.json (trf name=prmon)
[2025-11-22 21:39:13] 2025-11-22 20:38:04,629 | INFO     | extracted standard info from prmon json
[2025-11-22 21:39:13] 2025-11-22 20:38:04,630 | INFO     | extracted standard memory fields from prmon json
[2025-11-22 21:39:13] 2025-11-22 20:38:04,630 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-22 21:39:13] 2025-11-22 20:38:04,675 | INFO     | fitting pss+swap vs Time
[2025-11-22 21:39:13] 2025-11-22 20:38:04,678 | INFO     | sum of square deviations: 1054922461125.125
[2025-11-22 21:39:13] 2025-11-22 20:38:04,832 | INFO     | sum of deviations: 3596863312905.118
[2025-11-22 21:39:13] 2025-11-22 20:38:04,832 | INFO     | mean x: 1763797934.8125
[2025-11-22 21:39:13] 2025-11-22 20:38:04,832 | INFO     | mean y: 2845093.472074468
[2025-11-22 21:39:13] 2025-11-22 20:38:04,833 | INFO     | intersect: -6010999825.839405
[2025-11-22 21:39:13] 2025-11-22 20:38:04,835 | INFO     | chi2: 24.041248658893885
[2025-11-22 21:39:13] 2025-11-22 20:38:04,837 | INFO     | sum of square deviations: 1044436801456.4854
[2025-11-22 21:39:13] 2025-11-22 20:38:04,995 | INFO     | sum of deviations: 4092502831932.445
[2025-11-22 21:39:13] 2025-11-22 20:38:04,995 | INFO     | mean x: 1763797782.3168778
[2025-11-22 21:39:13] 2025-11-22 20:38:04,995 | INFO     | mean y: 2852300.3148765843
[2025-11-22 21:39:13] 2025-11-22 20:38:04,995 | INFO     | intersect: -6908381973.527138
[2025-11-22 21:39:13] 2025-11-22 20:38:04,997 | INFO     | chi2: 20.85301862047753
[2025-11-22 21:39:13] 2025-11-22 20:38:04,998 | INFO     | current chi2=20.85301862047753 (change=13.261499365744845 %)
[2025-11-22 21:39:13] 2025-11-22 20:38:04,998 | INFO     | right removable region: 1498
[2025-11-22 21:39:13] 2025-11-22 20:38:05,000 | INFO     | sum of square deviations: 1044435597316.484
[2025-11-22 21:39:13] 2025-11-22 20:38:05,072 | INFO     | sum of deviations: 2975225812236.6997
[2025-11-22 21:39:13] 2025-11-22 20:38:05,072 | INFO     | mean x: 1763798087.3168778
[2025-11-22 21:39:13] 2025-11-22 20:38:05,073 | INFO     | mean y: 2854132.9206137424
[2025-11-22 21:39:13] 2025-11-22 20:38:05,073 | INFO     | intersect: -5021579743.559702
[2025-11-22 21:39:13] 2025-11-22 20:38:05,075 | INFO     | chi2: 19.49532610373201
[2025-11-22 21:39:13] 2025-11-22 20:38:05,075 | INFO     | current chi2=19.49532610373201 (change=18.908845458325 %)
[2025-11-22 21:39:13] 2025-11-22 20:38:05,075 | INFO     | left removable region: 10
[2025-11-22 21:39:13] 2025-11-22 20:38:05,077 | INFO     | sum of square deviations: 1021611036733.2675
[2025-11-22 21:39:13] 2025-11-22 20:38:05,140 | INFO     | sum of deviations: 3055696268806.249
[2025-11-22 21:39:13] 2025-11-22 20:38:05,141 | INFO     | mean x: 1763798056.826613
[2025-11-22 21:39:13] 2025-11-22 20:38:05,141 | INFO     | mean y: 2870561.5241935486
[2025-11-22 21:39:13] 2025-11-22 20:38:05,141 | INFO     | intersect: -5272748972.116351
[2025-11-22 21:39:13] 2025-11-22 20:38:05,143 | INFO     | chi2: 12.526118870654322
[2025-11-22 21:39:13] 2025-11-22 20:38:05,143 | INFO     | current memory leak: 2.99 B/s (using 1488 data points, chi2=12.53)
[2025-11-22 21:39:13] 2025-11-22 20:38:05,146 | INFO     | could have reported an average CPU frequency of 1999 MHz (51 samples)
[2025-11-22 21:39:13] 2025-11-22 20:38:05,146 | INFO     | ..............................
[2025-11-22 21:39:13] 2025-11-22 20:38:05,146 | INFO     | . Timing measurements:
[2025-11-22 21:39:13] 2025-11-22 20:38:05,146 | INFO     | . get job = 0 s
[2025-11-22 21:39:13] 2025-11-22 20:38:05,147 | INFO     | . initial setup = 4 s
[2025-11-22 21:39:13] 2025-11-22 20:38:05,147 | INFO     | . payload setup = 173 s
[2025-11-22 21:39:13] 2025-11-22 20:38:05,147 | INFO     | . stage-in = 0 s
[2025-11-22 21:39:13] 2025-11-22 20:38:05,147 | INFO     | . payload execution = 91844 s
[2025-11-22 21:39:13] 2025-11-22 20:38:05,147 | INFO     | . stage-out = 9 s
[2025-11-22 21:39:13] 2025-11-22 20:38:05,147 | INFO     | . log creation = 2 s
[2025-11-22 21:39:13] 2025-11-22 20:38:05,147 | INFO     | ..............................
[2025-11-22 21:39:13] 2025-11-22 20:38:05,525 | INFO     | 
[2025-11-22 21:39:13] 2025-11-22 20:38:05,525 | INFO     | job summary report
[2025-11-22 21:39:13] 2025-11-22 20:38:05,525 | INFO     | --------------------------------------------------
[2025-11-22 21:39:13] 2025-11-22 20:38:05,526 | INFO     | PanDA job id: 6891555422
[2025-11-22 21:39:13] 2025-11-22 20:38:05,526 | INFO     | task id: 47493068
[2025-11-22 21:39:13] 2025-11-22 20:38:05,526 | INFO     | errors: (none)
[2025-11-22 21:39:13] 2025-11-22 20:38:05,526 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-22 21:39:13] 2025-11-22 20:38:05,526 | INFO     | pilot state: finished 
[2025-11-22 21:39:13] 2025-11-22 20:38:05,526 | INFO     | transexitcode: 0
[2025-11-22 21:39:13] 2025-11-22 20:38:05,526 | INFO     | exeerrorcode: 0
[2025-11-22 21:39:13] 2025-11-22 20:38:05,526 | INFO     | exeerrordiag: 
[2025-11-22 21:39:13] 2025-11-22 20:38:05,526 | INFO     | exitcode: 0
[2025-11-22 21:39:13] 2025-11-22 20:38:05,526 | INFO     | exitmsg: OK
[2025-11-22 21:39:13] 2025-11-22 20:38:05,526 | INFO     | cpuconsumptiontime: 339531 s
[2025-11-22 21:39:13] 2025-11-22 20:38:05,527 | INFO     | nevents: 1000
[2025-11-22 21:39:13] 2025-11-22 20:38:05,527 | INFO     | neventsw: 0
[2025-11-22 21:39:13] 2025-11-22 20:38:05,527 | INFO     | pid: 4684
[2025-11-22 21:39:13] 2025-11-22 20:38:05,527 | INFO     | pgrp: 4684
[2025-11-22 21:39:13] 2025-11-22 20:38:05,527 | INFO     | corecount: 8
[2025-11-22 21:39:13] 2025-11-22 20:38:05,527 | INFO     | event service: False
[2025-11-22 21:39:13] 2025-11-22 20:38:05,527 | INFO     | sizes: {0: 2298566, 1: 2298821, 12: 2298821, 23: 2298849, 33: 2298877, 44: 2298933, 55: 2299089, 66: 2299117, 76: 2299145, 87: 2299201, 98: 2299229, 100: 2299799, 
[2025-11-22 21:39:13] 2025-11-22 20:38:05,527 | INFO     | --------------------------------------------------
[2025-11-22 21:39:13] 2025-11-22 20:38:05,527 | INFO     | 
[2025-11-22 21:39:13] 2025-11-22 20:38:05,527 | INFO     | executing command: ls -lF /var/lib/boinc/slots/10
[2025-11-22 21:39:13] 2025-11-22 20:38:05,870 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-22 21:39:13] 2025-11-22 20:38:05,870 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-22 21:39:13] 2025-11-22 20:38:05,870 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-22 21:39:13] 2025-11-22 20:38:05,870 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-22 21:39:13] 2025-11-22 20:38:05,870 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-22 21:39:13] 2025-11-22 20:38:05,870 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-22 21:39:13] 2025-11-22 20:38:05,870 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-22 21:39:13] 2025-11-22 20:38:05,871 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-22 21:39:13] 2025-11-22 20:38:05,871 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-22 21:39:13] 2025-11-22 20:38:05,871 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-22 21:39:13] 2025-11-22 20:38:05,871 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-22 21:39:13] 2025-11-22 20:38:05,871 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-22 21:39:13] 2025-11-22 20:38:05,871 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-22 21:39:13] 2025-11-22 20:38:05,871 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-22 21:39:13] 2025-11-22 20:38:05,871 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-22 21:39:13] 2025-11-22 20:38:05,871 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-22 21:39:13] 2025-11-22 20:38:05,871 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-22 21:39:13] 2025-11-22 20:38:05,871 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-22 21:39:13] 2025-11-22 20:38:05,872 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-22 21:39:13] 2025-11-22 20:38:05,872 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-22 21:39:13] 2025-11-22 20:38:05,872 | INFO     | job 6891555422 has completed (purged errors)
[2025-11-22 21:39:13] 2025-11-22 20:38:05,872 | INFO     | overall cleanup function is called
[2025-11-22 21:39:13] 2025-11-22 20:38:06,904 | INFO     | --- collectZombieJob: --- 10, [4684]
[2025-11-22 21:39:13] 2025-11-22 20:38:06,904 | INFO     | zombie collector waiting for pid 4684
[2025-11-22 21:39:13] 2025-11-22 20:38:06,904 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-22 21:39:13] 2025-11-22 20:38:06,904 | INFO     | collected zombie processes
[2025-11-22 21:39:13] 2025-11-22 20:38:06,905 | INFO     | will attempt to kill all subprocesses of pid=4684
[2025-11-22 21:39:13] 2025-11-22 20:38:07,011 | INFO     | process IDs to be killed: [4684] (in reverse order)
[2025-11-22 21:39:13] 2025-11-22 20:38:07,697 | WARNING  | found no corresponding commands to process id(s)
[2025-11-22 21:39:13] 2025-11-22 20:38:07,697 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-22 21:39:13] 2025-11-22 20:38:07,701 | INFO     | did not find any defunct processes belonging to 4684
[2025-11-22 21:39:13] 2025-11-22 20:38:07,704 | INFO     | did not find any defunct processes belonging to 4684
[2025-11-22 21:39:13] 2025-11-22 20:38:07,723 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-22 21:39:13] 2025-11-22 20:38:07,724 | INFO     | ready for new job
[2025-11-22 21:39:13] 2025-11-22 20:38:07,724 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-22 21:39:13] 2025-11-22 20:38:07,730 | INFO     | ***************************************
[2025-11-22 21:39:13] 2025-11-22 20:38:07,731 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-22 21:39:13] 2025-11-22 20:38:07,731 | INFO     | ***************************************
[2025-11-22 21:39:13] 2025-11-22 20:38:07,731 | INFO     | 
[2025-11-22 21:39:13] 2025-11-22 20:38:07,732 | INFO     | pilot is running in a VM
[2025-11-22 21:39:13] 2025-11-22 20:38:07,732 | INFO     | architecture information:
[2025-11-22 21:39:13] 2025-11-22 20:38:07,732 | INFO     | executing command: cat /etc/os-release
[2025-11-22 21:39:13] 2025-11-22 20:38:07,902 | INFO     | cat /etc/os-release:
[2025-11-22 21:39:13] NAME="CentOS Linux"
[2025-11-22 21:39:13] VERSION="7 (Core)"
[2025-11-22 21:39:13] ID="centos"
[2025-11-22 21:39:13] ID_LIKE="rhel fedora"
[2025-11-22 21:39:13] VERSION_ID="7"
[2025-11-22 21:39:13] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-22 21:39:13] ANSI_COLOR="0;31"
[2025-11-22 21:39:13] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-22 21:39:13] HOME_URL="https://www.centos.org/"
[2025-11-22 21:39:13] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-22 21:39:13] 
[2025-11-22 21:39:13] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-22 21:39:13] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-22 21:39:13] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-22 21:39:13] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-22 21:39:13] 
[2025-11-22 21:39:13] 2025-11-22 20:38:07,903 | INFO     | ***************************************
[2025-11-22 21:39:13] 2025-11-22 20:38:08,406 | INFO     | executing command: df -mP /var/lib/boinc/slots/10
[2025-11-22 21:39:13] 2025-11-22 20:38:08,679 | INFO     | sufficient remaining disk space (494853423104 B)
[2025-11-22 21:39:13] 2025-11-22 20:38:08,680 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-22 21:39:13] 2025-11-22 20:38:08,680 | INFO     | current server update state: UPDATING_FINAL
[2025-11-22 21:39:13] 2025-11-22 20:38:08,680 | INFO     | update_server=False
[2025-11-22 21:39:13] 2025-11-22 20:38:08,680 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-22 21:39:13] 2025-11-22 20:38:08,681 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-22 21:39:13] 2025-11-22 20:38:08,898 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-22 21:39:13] 2025-11-22 20:38:08,898 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-22 21:39:13] 2025-11-22 20:38:08,899 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-22 21:39:13] 2025-11-22 20:38:08,899 | INFO     | will abort loop
[2025-11-22 21:39:13] 2025-11-22 20:38:09,340 | INFO     | all data control threads have been joined
[2025-11-22 21:39:13] 2025-11-22 20:38:09,356 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-22 21:39:13] 2025-11-22 20:38:09,686 | INFO     | [job] retrieve thread has finished
[2025-11-22 21:39:13] 2025-11-22 20:38:09,714 | INFO     | all job control threads have been joined
[2025-11-22 21:39:13] 2025-11-22 20:38:09,720 | INFO     | [job] validate thread has finished
[2025-11-22 21:39:13] 2025-11-22 20:38:09,735 | INFO     | [payload] failed_post thread has finished
[2025-11-22 21:39:13] 2025-11-22 20:38:09,827 | INFO     | all payload control threads have been joined
[2025-11-22 21:39:13] 2025-11-22 20:38:09,905 | INFO     | [job] job monitor thread has finished
[2025-11-22 21:39:13] 2025-11-22 20:38:10,049 | INFO     | [payload] validate_pre thread has finished
[2025-11-22 21:39:13] 2025-11-22 20:38:10,060 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-22 21:39:13] 2025-11-22 20:38:10,131 | INFO     | [payload] validate_post thread has finished
[2025-11-22 21:39:13] 2025-11-22 20:38:10,186 | INFO     | [data] copytool_in thread has finished
[2025-11-22 21:39:13] 2025-11-22 20:38:10,309 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-22 21:39:13] 2025-11-22 20:38:10,346 | INFO     | [data] control thread has finished
[2025-11-22 21:39:13] 2025-11-22 20:38:10,456 | INFO     | [job] create_data_payload thread has finished
[2025-11-22 21:39:13] 2025-11-22 20:38:10,720 | INFO     | [job] control thread has finished
[2025-11-22 21:39:13] 2025-11-22 20:38:10,833 | INFO     | [payload] control thread has finished
[2025-11-22 21:39:13] 2025-11-22 20:38:10,961 | INFO     | [payload] execute_payloads thread has finished
[2025-11-22 21:39:13] 2025-11-22 20:38:11,314 | INFO     | [job] queue monitor thread has finished
[2025-11-22 21:39:13] 2025-11-22 20:38:11,363 | INFO     | [data] copytool_out thread has finished
[2025-11-22 21:39:13] 2025-11-22 20:38:12,689 | INFO     | [data] queue_monitor thread has finished
[2025-11-22 21:39:13] 2025-11-22 20:38:37,634 | INFO     | PID=30494 has CPU usage=1.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-22 21:39:13] 2025-11-22 20:38:37,635 | INFO     | .. there are 9 such processes running
[2025-11-22 21:39:13] 2025-11-22 20:38:37,635 | INFO     | found 0 job(s) in 20 queues
[2025-11-22 21:39:13] 2025-11-22 20:38:37,635 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-22 21:39:13] 2025-11-22 20:38:37,635 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-22 21:39:13] 2025-11-22 20:39:00,590 | INFO     | [monitor] cgroup control has ended
[2025-11-22 21:39:13] 2025-11-22 20:39:02,411 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139801157838656)>', '<ExcThread(monitor, started 139800556324608)>']
[2025-11-22 21:39:13] 2025-11-22 20:39:02,786 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-22 21:39:13] 2025-11-22 20:39:02,786 | INFO     | [monitor] control thread has ended
[2025-11-22 21:39:13] 2025-11-22 20:39:07,437 | INFO     | all workflow threads have been joined
[2025-11-22 21:39:13] 2025-11-22 20:39:07,437 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-22 21:39:13] 2025-11-22 20:39:07,438 | INFO     | traces error code: 0
[2025-11-22 21:39:13] 2025-11-22 20:39:07,438 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-22 21:39:13] 2025-11-22 20:39:07,905 [wrapper] ==== pilot stdout END ====
[2025-11-22 21:39:13] 2025-11-22 20:39:08,010 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-22 21:39:13] 2025-11-22 20:39:08,128 [wrapper] pilotpid: 30494
[2025-11-22 21:39:13] 2025-11-22 20:39:08,234 [wrapper] Pilot exit status: 0
[2025-11-22 21:39:13] 2025-11-22 20:39:08,695 [wrapper] pandaids: 6891555422
[2025-11-22 21:39:13] 2025-11-22 20:39:09,688 [wrapper] cleanup supervisor_pilot  8984 30495
[2025-11-22 21:39:13] 2025-11-22 20:39:09,763 [wrapper] Test setup, not cleaning
[2025-11-22 21:39:13] 2025-11-22 20:39:09,850 [wrapper] apfmon messages muted
[2025-11-22 21:39:13] 2025-11-22 20:39:09,947 [wrapper] ==== wrapper stdout END ====
[2025-11-22 21:39:13] 2025-11-22 20:39:10,026 [wrapper] ==== wrapper stderr END ====
[2025-11-22 21:39:13]  *** Error codes and diagnostics ***
[2025-11-22 21:39:13]     "exeErrorCode": 0,
[2025-11-22 21:39:13]     "exeErrorDiag": "",
[2025-11-22 21:39:13]     "pilotErrorCode": 0,
[2025-11-22 21:39:13]     "pilotErrorDiag": "",
[2025-11-22 21:39:13]  *** Listing of results directory ***
[2025-11-22 21:39:13] total 1332224
[2025-11-22 21:39:13] -rw-r--r--. 1 boinc boinc    576529 Nov 18 16:15 pilot3.tar.gz
[2025-11-22 21:39:13] -rw-r--r--. 1 boinc boinc      5112 Nov 18 16:20 queuedata.json
[2025-11-22 21:39:13] -rwx------. 1 boinc boinc     36292 Nov 18 16:20 runpilot2-wrapper.sh
[2025-11-22 21:39:13] -rw-r--r--. 1 boinc boinc       100 Nov 21 19:55 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-22 21:39:13] -rwxr-xr-x. 1 boinc boinc      7986 Nov 21 19:55 run_atlas
[2025-11-22 21:39:13] -rw-r--r--. 1 boinc boinc       105 Nov 21 19:55 job.xml
[2025-11-22 21:39:13] -rw-r--r--. 2 boinc boinc 409642379 Nov 21 19:55 EVNT.47493065._000024.pool.root.1
[2025-11-22 21:39:13] -rw-r--r--. 2 boinc boinc     15120 Nov 21 19:55 start_atlas.sh
[2025-11-22 21:39:13] drwxrwx--x. 2 boinc boinc        68 Nov 21 19:55 shared
[2025-11-22 21:39:13] -rw-r--r--. 2 boinc boinc    590102 Nov 21 19:55 input.tar.gz
[2025-11-22 21:39:13] -rw-r--r--. 1 boinc boinc      6391 Nov 21 19:55 init_data.xml
[2025-11-22 21:39:13] -rw-r--r--. 1 boinc boinc         0 Nov 21 19:55 boinc_lockfile
[2025-11-22 21:39:13] -rw-r--r--. 1 boinc boinc      2771 Nov 21 19:55 pandaJob.out
[2025-11-22 21:39:13] -rw-------. 1 boinc boinc    989817 Nov 21 19:59 agis_schedconf.cvmfs.json
[2025-11-22 21:39:13] drwx------. 5 boinc boinc      4096 Nov 21 19:59 pilot3
[2025-11-22 21:39:13] -rw-r--r--. 1 boinc boinc       533 Nov 22 21:12 boinc_task_state.xml
[2025-11-22 21:39:13] -rw-------. 1 boinc boinc 920883071 Nov 22 21:35 HITS.47493068._000238.pool.root.1
[2025-11-22 21:39:13] -rw-------. 1 boinc boinc      1030 Nov 22 21:36 memory_monitor_summary.json
[2025-11-22 21:39:13] -rw-------. 1 boinc boinc   1526164 Nov 22 21:36 agis_ddmendpoints.agis.ALL.json
[2025-11-22 21:39:13] -rw-------. 1 boinc boinc   2580135 Nov 22 21:36 log.47493068._000238.job.log.tgz.1
[2025-11-22 21:39:13] -rw-------. 1 boinc boinc        95 Nov 22 21:37 pilot_heartbeat.json
[2025-11-22 21:39:13] -rw-------. 1 boinc boinc      8636 Nov 22 21:38 heartbeat.json
[2025-11-22 21:39:13] -rw-r--r--. 1 boinc boinc      8192 Nov 22 21:38 boinc_mmap_file
[2025-11-22 21:39:13] -rw-r--r--. 1 boinc boinc        29 Nov 22 21:38 wrapper_checkpoint.txt
[2025-11-22 21:39:13] -rw-------. 1 boinc boinc      5071 Nov 22 21:39 pilotlog.txt
[2025-11-22 21:39:13] -rw-------. 1 boinc boinc  12300433 Nov 22 21:39 log.47493068._000238.job.log.1
[2025-11-22 21:39:13] -rw-------. 1 boinc boinc       353 Nov 22 21:39 output.list
[2025-11-22 21:39:13] -rw-r--r--. 1 boinc boinc       620 Nov 22 21:39 runtime_log
[2025-11-22 21:39:13] -rw-------. 1 boinc boinc  14899200 Nov 22 21:39 result.tar.gz
[2025-11-22 21:39:13] -rw-------. 1 boinc boinc       662 Nov 22 21:39 xEEMDmYgcf8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm9GFKDmY2gINn.diag
[2025-11-22 21:39:13] -rw-r--r--. 1 boinc boinc      8717 Nov 22 21:39 runtime_log.err
[2025-11-22 21:39:13] -rw-r--r--. 1 boinc boinc     21406 Nov 22 21:39 stderr.txt
[2025-11-22 21:39:13] HITS file was successfully produced:
[2025-11-22 21:39:13] -rw-------. 1 boinc boinc 920883071 Nov 22 21:35 shared/HITS.pool.root.1
[2025-11-22 21:39:13]  *** Contents of shared directory: ***
[2025-11-22 21:39:13] total 1314492
[2025-11-22 21:39:13] -rw-r--r--. 2 boinc boinc 409642379 Nov 21 19:55 ATLAS.root_0
[2025-11-22 21:39:13] -rw-r--r--. 2 boinc boinc     15120 Nov 21 19:55 start_atlas.sh
[2025-11-22 21:39:13] -rw-r--r--. 2 boinc boinc    590102 Nov 21 19:55 input.tar.gz
[2025-11-22 21:39:13] -rw-------. 1 boinc boinc 920883071 Nov 22 21:35 HITS.pool.root.1
[2025-11-22 21:39:13] -rw-------. 1 boinc boinc  14899200 Nov 22 21:39 result.tar.gz
21:39:15 (26720): run_atlas exited; CPU time 340074.840916
21:39:15 (26720): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN