Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
18:07:14 (21144): wrapper (7.7.26015): starting
18:07:14 (21144): wrapper: running run_atlas (--nthreads 8)
[2025-11-19 18:07:14] Arguments: --nthreads 8
[2025-11-19 18:07:14] Threads: 8
[2025-11-19 18:07:14] Checking for CVMFS
[2025-11-19 18:07:15] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-19 18:07:16] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-19 18:07:16] Running cvmfs_config stat atlas.cern.ch
[2025-11-19 18:07:17] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-19 18:07:17] 2.11.2.0 30743 71895 87272 153051 0 85 12672757 25165825 4632 130560 2 19954357 99.850 12353560 2047 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-11-19 18:07:17] CVMFS is ok
[2025-11-19 18:07:17] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-19 18:07:17] Checking for apptainer binary...
[2025-11-19 18:07:17] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-19 18:07:17] Running /usr/bin/apptainer --version
[2025-11-19 18:07:17] apptainer version 1.3.2-1.el7
[2025-11-19 18:07:17] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-19 18:07:19] cg-vwn349.simple-grid.lan
[2025-11-19 18:07:19] apptainer works
[2025-11-19 18:07:19] Set ATHENA_PROC_NUMBER=8
[2025-11-19 18:07:19] Set ATHENA_CORE_NUMBER=8
[2025-11-19 18:07:20] Starting ATLAS job with PandaID=6891558299
[2025-11-19 18:07:20] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/11 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-20 19:42:30]  *** The last 200 lines of the pilot log: ***
[2025-11-20 19:42:30] 2025-11-20 18:41:33,251 | INFO     | mean x: 1763618272.9166667
[2025-11-20 19:42:30] 2025-11-20 18:41:33,251 | INFO     | mean y: 2877519.3346666666
[2025-11-20 19:42:30] 2025-11-20 18:41:33,251 | INFO     | intersect: -4600843868.823441
[2025-11-20 19:42:30] 2025-11-20 18:41:33,253 | INFO     | chi2: 12.25366242190931
[2025-11-20 19:42:30] 2025-11-20 18:41:33,255 | INFO     | sum of square deviations: 1036097384580.5151
[2025-11-20 19:42:30] 2025-11-20 18:41:33,319 | INFO     | sum of deviations: 3255710410113.658
[2025-11-20 19:42:30] 2025-11-20 18:41:33,319 | INFO     | mean x: 1763618120.4214046
[2025-11-20 19:42:30] 2025-11-20 18:41:33,319 | INFO     | mean y: 2885177.14180602
[2025-11-20 19:42:30] 2025-11-20 18:41:33,319 | INFO     | intersect: -5538900720.180717
[2025-11-20 19:42:30] 2025-11-20 18:41:33,321 | INFO     | chi2: 8.80188376709227
[2025-11-20 19:42:30] 2025-11-20 18:41:33,321 | INFO     | current chi2=8.80188376709227 (change=28.16936305218696 %)
[2025-11-20 19:42:30] 2025-11-20 18:41:33,324 | INFO     | sum of square deviations: 1025737103547.8794
[2025-11-20 19:42:30] 2025-11-20 18:41:33,390 | INFO     | sum of deviations: 3842943120833.4688
[2025-11-20 19:42:30] 2025-11-20 18:41:33,391 | INFO     | mean x: 1763617967.9261744
[2025-11-20 19:42:30] 2025-11-20 18:41:33,391 | INFO     | mean y: 2893821.7315436243
[2025-11-20 19:42:30] 2025-11-20 18:41:33,391 | INFO     | intersect: -6604533670.340096
[2025-11-20 19:42:30] 2025-11-20 18:41:33,393 | INFO     | chi2: 4.672858701287192
[2025-11-20 19:42:30] 2025-11-20 18:41:33,393 | INFO     | current chi2=4.672858701287192 (change=46.910697471856245 %)
[2025-11-20 19:42:30] 2025-11-20 18:41:33,395 | INFO     | sum of square deviations: 1015446126140.1763
[2025-11-20 19:42:30] 2025-11-20 18:41:33,458 | INFO     | sum of deviations: 4197069423517.336
[2025-11-20 19:42:30] 2025-11-20 18:41:33,459 | INFO     | mean x: 1763617815.4309764
[2025-11-20 19:42:30] 2025-11-20 18:41:33,459 | INFO     | mean y: 2899065.8276094277
[2025-11-20 19:42:30] 2025-11-20 18:41:33,459 | INFO     | intersect: -7286533841.904993
[2025-11-20 19:42:30] 2025-11-20 18:41:33,461 | INFO     | chi2: 2.8862785020454784
[2025-11-20 19:42:30] 2025-11-20 18:41:33,461 | INFO     | current chi2=2.8862785020454784 (change=38.23313122542266 %)
[2025-11-20 19:42:30] 2025-11-20 18:41:33,463 | INFO     | sum of square deviations: 1005223767365.2428
[2025-11-20 19:42:30] 2025-11-20 18:41:33,530 | INFO     | sum of deviations: 4222529366729.7144
[2025-11-20 19:42:30] 2025-11-20 18:41:33,531 | INFO     | mean x: 1763617662.9324324
[2025-11-20 19:42:30] 2025-11-20 18:41:33,531 | INFO     | mean y: 2899443.6871621623
[2025-11-20 19:42:30] 2025-11-20 18:41:33,531 | INFO     | intersect: -7405329067.397793
[2025-11-20 19:42:30] 2025-11-20 18:41:33,533 | INFO     | chi2: 2.7738100171618205
[2025-11-20 19:42:30] 2025-11-20 18:41:33,533 | INFO     | current chi2=2.7738100171618205 (change=3.8966608663700524 %)
[2025-11-20 19:42:30] 2025-11-20 18:41:33,533 | INFO     | right removable region: 1479
[2025-11-20 19:42:30] 2025-11-20 18:41:33,535 | INFO     | sum of square deviations: 1036096088330.5143
[2025-11-20 19:42:30] 2025-11-20 18:41:33,599 | INFO     | sum of deviations: 2274775505091.685
[2025-11-20 19:42:30] 2025-11-20 18:41:33,600 | INFO     | mean x: 1763618425.4214046
[2025-11-20 19:42:30] 2025-11-20 18:41:33,600 | INFO     | mean y: 2884198.797324415
[2025-11-20 19:42:30] 2025-11-20 18:41:33,600 | INFO     | intersect: -3869185235.3623424
[2025-11-20 19:42:30] 2025-11-20 18:41:33,602 | INFO     | chi2: 9.827017750589302
[2025-11-20 19:42:30] 2025-11-20 18:41:33,602 | INFO     | current chi2=9.827017750589302 (change=19.80342356242174 %)
[2025-11-20 19:42:30] 2025-11-20 18:41:33,602 | INFO     | left removable region: 10
[2025-11-20 19:42:30] 2025-11-20 18:41:33,604 | INFO     | sum of square deviations: 982975597253.4259
[2025-11-20 19:42:30] 2025-11-20 18:41:33,662 | INFO     | sum of deviations: 3647270841815.1294
[2025-11-20 19:42:30] 2025-11-20 18:41:33,663 | INFO     | mean x: 1763617937.437032
[2025-11-20 19:42:30] 2025-11-20 18:41:33,663 | INFO     | mean y: 2907918.277059224
[2025-11-20 19:42:30] 2025-11-20 18:41:33,663 | INFO     | intersect: -6540888588.258044
[2025-11-20 19:42:30] 2025-11-20 18:41:33,665 | INFO     | chi2: 0.22464719545197964
[2025-11-20 19:42:30] 2025-11-20 18:41:33,665 | INFO     | current memory leak: 3.71 B/s (using 1469 data points, chi2=0.22)
[2025-11-20 19:42:30] 2025-11-20 18:41:33,668 | INFO     | could have reported an average CPU frequency of 1999 MHz (50 samples)
[2025-11-20 19:42:30] 2025-11-20 18:41:33,668 | INFO     | ..............................
[2025-11-20 19:42:30] 2025-11-20 18:41:33,668 | INFO     | . Timing measurements:
[2025-11-20 19:42:30] 2025-11-20 18:41:33,668 | INFO     | . get job = 0 s
[2025-11-20 19:42:30] 2025-11-20 18:41:33,668 | INFO     | . initial setup = 9 s
[2025-11-20 19:42:30] 2025-11-20 18:41:33,668 | INFO     | . payload setup = 32 s
[2025-11-20 19:42:30] 2025-11-20 18:41:33,668 | INFO     | . stage-in = 0 s
[2025-11-20 19:42:30] 2025-11-20 18:41:33,669 | INFO     | . payload execution = 91469 s
[2025-11-20 19:42:30] 2025-11-20 18:41:33,669 | INFO     | . stage-out = 4 s
[2025-11-20 19:42:30] 2025-11-20 18:41:33,669 | INFO     | . log creation = 1 s
[2025-11-20 19:42:30] 2025-11-20 18:41:33,669 | INFO     | ..............................
[2025-11-20 19:42:30] 2025-11-20 18:41:33,953 | INFO     | 
[2025-11-20 19:42:30] 2025-11-20 18:41:33,953 | INFO     | job summary report
[2025-11-20 19:42:30] 2025-11-20 18:41:33,953 | INFO     | --------------------------------------------------
[2025-11-20 19:42:30] 2025-11-20 18:41:33,953 | INFO     | PanDA job id: 6891558299
[2025-11-20 19:42:30] 2025-11-20 18:41:33,953 | INFO     | task id: 47493068
[2025-11-20 19:42:30] 2025-11-20 18:41:33,953 | INFO     | errors: (none)
[2025-11-20 19:42:30] 2025-11-20 18:41:33,954 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-20 19:42:30] 2025-11-20 18:41:33,954 | INFO     | pilot state: finished 
[2025-11-20 19:42:30] 2025-11-20 18:41:33,954 | INFO     | transexitcode: 0
[2025-11-20 19:42:30] 2025-11-20 18:41:33,954 | INFO     | exeerrorcode: 0
[2025-11-20 19:42:30] 2025-11-20 18:41:33,954 | INFO     | exeerrordiag: 
[2025-11-20 19:42:30] 2025-11-20 18:41:33,954 | INFO     | exitcode: 0
[2025-11-20 19:42:30] 2025-11-20 18:41:33,954 | INFO     | exitmsg: OK
[2025-11-20 19:42:30] 2025-11-20 18:41:33,954 | INFO     | cpuconsumptiontime: 339642 s
[2025-11-20 19:42:30] 2025-11-20 18:41:33,954 | INFO     | nevents: 1000
[2025-11-20 19:42:30] 2025-11-20 18:41:33,954 | INFO     | neventsw: 0
[2025-11-20 19:42:30] 2025-11-20 18:41:33,954 | INFO     | pid: 31611
[2025-11-20 19:42:30] 2025-11-20 18:41:33,955 | INFO     | pgrp: 31611
[2025-11-20 19:42:30] 2025-11-20 18:41:33,955 | INFO     | corecount: 8
[2025-11-20 19:42:30] 2025-11-20 18:41:33,955 | INFO     | event service: False
[2025-11-20 19:42:30] 2025-11-20 18:41:33,955 | INFO     | sizes: {0: 2296362, 1: 2297048, 2: 2297247, 13: 2297247, 24: 2297303, 34: 2297331, 45: 2297487, 56: 2297515, 67: 2297543, 77: 2297571, 88: 2297627, 93: 2298197, 99
[2025-11-20 19:42:30] 2025-11-20 18:41:33,955 | INFO     | --------------------------------------------------
[2025-11-20 19:42:30] 2025-11-20 18:41:33,955 | INFO     | 
[2025-11-20 19:42:30] 2025-11-20 18:41:33,955 | INFO     | executing command: ls -lF /var/lib/boinc/slots/11
[2025-11-20 19:42:30] 2025-11-20 18:41:34,426 | INFO     | PID=24964 has CPU usage=3.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-20 19:42:30] 2025-11-20 18:41:34,426 | INFO     | .. there are 9 such processes running
[2025-11-20 19:42:30] 2025-11-20 18:41:34,451 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-20 19:42:30] 2025-11-20 18:41:34,451 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-20 19:42:30] 2025-11-20 18:41:34,452 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-20 19:42:30] 2025-11-20 18:41:34,452 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-20 19:42:30] 2025-11-20 18:41:34,452 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-20 19:42:30] 2025-11-20 18:41:34,452 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-20 19:42:30] 2025-11-20 18:41:34,452 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-20 19:42:30] 2025-11-20 18:41:34,452 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-20 19:42:30] 2025-11-20 18:41:34,452 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-20 19:42:30] 2025-11-20 18:41:34,452 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-20 19:42:30] 2025-11-20 18:41:34,452 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-20 19:42:30] 2025-11-20 18:41:34,452 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-20 19:42:30] 2025-11-20 18:41:34,452 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-20 19:42:30] 2025-11-20 18:41:34,453 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-20 19:42:30] 2025-11-20 18:41:34,453 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-20 19:42:30] 2025-11-20 18:41:34,453 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-20 19:42:30] 2025-11-20 18:41:34,453 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-20 19:42:30] 2025-11-20 18:41:34,453 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-20 19:42:30] 2025-11-20 18:41:34,453 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-20 19:42:30] 2025-11-20 18:41:34,453 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-20 19:42:30] 2025-11-20 18:41:34,453 | INFO     | job 6891558299 has completed (purged errors)
[2025-11-20 19:42:30] 2025-11-20 18:41:34,453 | INFO     | overall cleanup function is called
[2025-11-20 19:42:30] 2025-11-20 18:41:35,472 | INFO     | --- collectZombieJob: --- 10, [31611]
[2025-11-20 19:42:30] 2025-11-20 18:41:35,472 | INFO     | zombie collector waiting for pid 31611
[2025-11-20 19:42:30] 2025-11-20 18:41:35,472 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-20 19:42:30] 2025-11-20 18:41:35,472 | INFO     | collected zombie processes
[2025-11-20 19:42:30] 2025-11-20 18:41:35,472 | INFO     | will attempt to kill all subprocesses of pid=31611
[2025-11-20 19:42:30] 2025-11-20 18:41:35,580 | INFO     | process IDs to be killed: [31611] (in reverse order)
[2025-11-20 19:42:30] 2025-11-20 18:41:36,288 | WARNING  | found no corresponding commands to process id(s)
[2025-11-20 19:42:30] 2025-11-20 18:41:36,289 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-20 19:42:30] 2025-11-20 18:41:36,292 | INFO     | did not find any defunct processes belonging to 31611
[2025-11-20 19:42:30] 2025-11-20 18:41:36,295 | INFO     | did not find any defunct processes belonging to 31611
[2025-11-20 19:42:30] 2025-11-20 18:41:36,363 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-20 19:42:30] 2025-11-20 18:41:36,363 | INFO     | ready for new job
[2025-11-20 19:42:30] 2025-11-20 18:41:36,364 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-20 19:42:30] 2025-11-20 18:41:36,370 | INFO     | ***************************************
[2025-11-20 19:42:30] 2025-11-20 18:41:36,370 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-20 19:42:30] 2025-11-20 18:41:36,370 | INFO     | ***************************************
[2025-11-20 19:42:30] 2025-11-20 18:41:36,370 | INFO     | 
[2025-11-20 19:42:30] 2025-11-20 18:41:36,371 | INFO     | pilot is running in a VM
[2025-11-20 19:42:30] 2025-11-20 18:41:36,371 | INFO     | architecture information:
[2025-11-20 19:42:30] 2025-11-20 18:41:36,379 | INFO     | executing command: cat /etc/os-release
[2025-11-20 19:42:30] 2025-11-20 18:41:36,655 | INFO     | cat /etc/os-release:
[2025-11-20 19:42:30] NAME="CentOS Linux"
[2025-11-20 19:42:30] VERSION="7 (Core)"
[2025-11-20 19:42:30] ID="centos"
[2025-11-20 19:42:30] ID_LIKE="rhel fedora"
[2025-11-20 19:42:30] VERSION_ID="7"
[2025-11-20 19:42:30] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-20 19:42:30] ANSI_COLOR="0;31"
[2025-11-20 19:42:30] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-20 19:42:30] HOME_URL="https://www.centos.org/"
[2025-11-20 19:42:30] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-20 19:42:30] 
[2025-11-20 19:42:30] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-20 19:42:30] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-20 19:42:30] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-20 19:42:30] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-20 19:42:30] 
[2025-11-20 19:42:30] 2025-11-20 18:41:36,655 | INFO     | ***************************************
[2025-11-20 19:42:30] 2025-11-20 18:41:37,159 | INFO     | executing command: df -mP /var/lib/boinc/slots/11
[2025-11-20 19:42:30] 2025-11-20 18:41:37,345 | INFO     | sufficient remaining disk space (494595473408 B)
[2025-11-20 19:42:30] 2025-11-20 18:41:37,346 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-20 19:42:30] 2025-11-20 18:41:37,346 | INFO     | current server update state: UPDATING_FINAL
[2025-11-20 19:42:30] 2025-11-20 18:41:37,346 | INFO     | update_server=False
[2025-11-20 19:42:30] 2025-11-20 18:41:37,346 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-20 19:42:30] 2025-11-20 18:41:37,487 | INFO     | all job control threads have been joined
[2025-11-20 19:42:30] 2025-11-20 18:41:37,707 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-20 19:42:30] 2025-11-20 18:41:37,707 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-20 19:42:30] 2025-11-20 18:41:37,707 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-20 19:42:30] 2025-11-20 18:41:37,707 | INFO     | will abort loop
[2025-11-20 19:42:30] 2025-11-20 18:41:37,836 | INFO     | all data control threads have been joined
[2025-11-20 19:42:30] 2025-11-20 18:41:37,999 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-20 19:42:30] 2025-11-20 18:41:38,352 | INFO     | [job] retrieve thread has finished
[2025-11-20 19:42:30] 2025-11-20 18:41:38,445 | INFO     | [payload] failed_post thread has finished
[2025-11-20 19:42:30] 2025-11-20 18:41:38,493 | INFO     | [job] control thread has finished
[2025-11-20 19:42:30] 2025-11-20 18:41:38,708 | INFO     | all payload control threads have been joined
[2025-11-20 19:42:30] 2025-11-20 18:41:38,714 | INFO     | [job] job monitor thread has finished
[2025-11-20 19:42:30] 2025-11-20 18:41:38,759 | INFO     | [payload] execute_payloads thread has finished
[2025-11-20 19:42:30] 2025-11-20 18:41:38,767 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-20 19:42:30] 2025-11-20 18:41:38,819 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-20 19:42:30] 2025-11-20 18:41:38,842 | INFO     | [data] control thread has finished
[2025-11-20 19:42:30] 2025-11-20 18:41:39,329 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-20 19:42:30] 2025-11-20 18:41:39,556 | INFO     | [job] validate thread has finished
[2025-11-20 19:42:30] 2025-11-20 18:41:39,623 | INFO     | [payload] validate_post thread has finished
[2025-11-20 19:42:30] 2025-11-20 18:41:39,714 | INFO     | [payload] control thread has finished
[2025-11-20 19:42:30] 2025-11-20 18:41:39,751 | INFO     | [data] copytool_in thread has finished
[2025-11-20 19:42:30] 2025-11-20 18:41:39,751 | INFO     | [job] create_data_payload thread has finished
[2025-11-20 19:42:30] 2025-11-20 18:41:39,777 | INFO     | [payload] validate_pre thread has finished
[2025-11-20 19:42:30] 2025-11-20 18:41:39,825 | INFO     | [job] queue monitor thread has finished
[2025-11-20 19:42:30] 2025-11-20 18:41:40,006 | INFO     | [data] copytool_out thread has finished
[2025-11-20 19:42:30] 2025-11-20 18:41:42,776 | INFO     | [data] queue_monitor thread has finished
[2025-11-20 19:42:30] 2025-11-20 18:42:06,629 | INFO     | PID=24964 has CPU usage=1.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-20 19:42:30] 2025-11-20 18:42:06,629 | INFO     | .. there are 9 such processes running
[2025-11-20 19:42:30] 2025-11-20 18:42:06,631 | INFO     | found 0 job(s) in 20 queues
[2025-11-20 19:42:30] 2025-11-20 18:42:06,631 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-20 19:42:30] 2025-11-20 18:42:06,631 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-20 19:42:30] 2025-11-20 18:42:20,100 | INFO     | [monitor] cgroup control has ended
[2025-11-20 19:42:30] 2025-11-20 18:42:21,200 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139833999042368)>', '<ExcThread(monitor, started 139833229948672)>']
[2025-11-20 19:42:30] 2025-11-20 18:42:21,721 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-20 19:42:30] 2025-11-20 18:42:21,721 | INFO     | [monitor] control thread has ended
[2025-11-20 19:42:30] 2025-11-20 18:42:26,225 | INFO     | all workflow threads have been joined
[2025-11-20 19:42:30] 2025-11-20 18:42:26,225 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-20 19:42:30] 2025-11-20 18:42:26,225 | INFO     | traces error code: 0
[2025-11-20 19:42:30] 2025-11-20 18:42:26,226 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-20 19:42:30] 2025-11-20 18:42:26,624 [wrapper] ==== pilot stdout END ====
[2025-11-20 19:42:30] 2025-11-20 18:42:26,673 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-20 19:42:30] 2025-11-20 18:42:26,763 [wrapper] pilotpid: 24964
[2025-11-20 19:42:30] 2025-11-20 18:42:26,860 [wrapper] Pilot exit status: 0
[2025-11-20 19:42:30] 2025-11-20 18:42:27,305 [wrapper] pandaids: 6891558299
[2025-11-20 19:42:30] 2025-11-20 18:42:28,303 [wrapper] cleanup supervisor_pilot 14384 24965
[2025-11-20 19:42:30] 2025-11-20 18:42:28,344 [wrapper] Test setup, not cleaning
[2025-11-20 19:42:30] 2025-11-20 18:42:28,392 [wrapper] apfmon messages muted
[2025-11-20 19:42:30] 2025-11-20 18:42:28,431 [wrapper] ==== wrapper stdout END ====
[2025-11-20 19:42:30] 2025-11-20 18:42:28,475 [wrapper] ==== wrapper stderr END ====
[2025-11-20 19:42:30]  *** Error codes and diagnostics ***
[2025-11-20 19:42:30]     "exeErrorCode": 0,
[2025-11-20 19:42:30]     "exeErrorDiag": "",
[2025-11-20 19:42:30]     "pilotErrorCode": 0,
[2025-11-20 19:42:30]     "pilotErrorDiag": "",
[2025-11-20 19:42:31]  *** Listing of results directory ***
[2025-11-20 19:42:31] total 1345976
[2025-11-20 19:42:31] -rw-r--r--. 1 boinc boinc    576529 Nov 18 16:15 pilot3.tar.gz
[2025-11-20 19:42:31] -rwx------. 1 boinc boinc     36292 Nov 18 16:20 runpilot2-wrapper.sh
[2025-11-20 19:42:31] -rw-r--r--. 1 boinc boinc      5112 Nov 18 16:20 queuedata.json
[2025-11-20 19:42:31] -rw-r--r--. 1 boinc boinc       100 Nov 19 18:07 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-20 19:42:31] -rwxr-xr-x. 1 boinc boinc      7986 Nov 19 18:07 run_atlas
[2025-11-20 19:42:31] -rw-r--r--. 1 boinc boinc       105 Nov 19 18:07 job.xml
[2025-11-20 19:42:31] -rw-r--r--. 2 boinc boinc 410683159 Nov 19 18:07 EVNT.47493065._000051.pool.root.1
[2025-11-20 19:42:31] drwxrwx--x. 2 boinc boinc        68 Nov 19 18:07 shared
[2025-11-20 19:42:31] -rw-r--r--. 2 boinc boinc    590091 Nov 19 18:07 input.tar.gz
[2025-11-20 19:42:31] -rw-r--r--. 1 boinc boinc      6392 Nov 19 18:07 init_data.xml
[2025-11-20 19:42:31] -rw-r--r--. 2 boinc boinc     15120 Nov 19 18:07 start_atlas.sh
[2025-11-20 19:42:31] -rw-r--r--. 1 boinc boinc         0 Nov 19 18:07 boinc_lockfile
[2025-11-20 19:42:31] -rw-r--r--. 1 boinc boinc      2768 Nov 19 18:07 pandaJob.out
[2025-11-20 19:42:31] -rw-------. 1 boinc boinc    989426 Nov 19 18:11 agis_schedconf.cvmfs.json
[2025-11-20 19:42:31] drwx------. 5 boinc boinc      4096 Nov 19 18:11 pilot3
[2025-11-20 19:42:31] -rw-r--r--. 1 boinc boinc       533 Nov 20 19:23 boinc_task_state.xml
[2025-11-20 19:42:31] -rw-------. 1 boinc boinc 934118669 Nov 20 19:38 HITS.47493068._000501.pool.root.1
[2025-11-20 19:42:31] -rw-------. 1 boinc boinc      1035 Nov 20 19:39 memory_monitor_summary.json
[2025-11-20 19:42:31] -rw-------. 1 boinc boinc   1526164 Nov 20 19:39 agis_ddmendpoints.agis.ALL.json
[2025-11-20 19:42:31] -rw-------. 1 boinc boinc   2562376 Nov 20 19:40 log.47493068._000501.job.log.tgz.1
[2025-11-20 19:42:31] -rw-------. 1 boinc boinc      8623 Nov 20 19:41 heartbeat.json
[2025-11-20 19:42:31] -rw-------. 1 boinc boinc        95 Nov 20 19:42 pilot_heartbeat.json
[2025-11-20 19:42:31] -rw-------. 1 boinc boinc      5071 Nov 20 19:42 pilotlog.txt
[2025-11-20 19:42:31] -rw-------. 1 boinc boinc  12220186 Nov 20 19:42 log.47493068._000501.job.log.1
[2025-11-20 19:42:31] -rw-r--r--. 1 boinc boinc      8192 Nov 20 19:42 boinc_mmap_file
[2025-11-20 19:42:31] -rw-r--r--. 1 boinc boinc        29 Nov 20 19:42 wrapper_checkpoint.txt
[2025-11-20 19:42:31] -rw-------. 1 boinc boinc       353 Nov 20 19:42 output.list
[2025-11-20 19:42:31] -rw-r--r--. 1 boinc boinc       620 Nov 20 19:42 runtime_log
[2025-11-20 19:42:31] -rw-------. 1 boinc boinc  14807040 Nov 20 19:42 result.tar.gz
[2025-11-20 19:42:31] -rw-r--r--. 1 boinc boinc      8717 Nov 20 19:42 runtime_log.err
[2025-11-20 19:42:31] -rw-------. 1 boinc boinc       662 Nov 20 19:42 R2iKDmOgcf8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmXGFKDmu2WDhn.diag
[2025-11-20 19:42:31] -rw-r--r--. 1 boinc boinc     20995 Nov 20 19:42 stderr.txt
[2025-11-20 19:42:31] HITS file was successfully produced:
[2025-11-20 19:42:31] -rw-------. 1 boinc boinc 934118669 Nov 20 19:38 shared/HITS.pool.root.1
[2025-11-20 19:42:31]  *** Contents of shared directory: ***
[2025-11-20 19:42:31] total 1328344
[2025-11-20 19:42:31] -rw-r--r--. 2 boinc boinc 410683159 Nov 19 18:07 ATLAS.root_0
[2025-11-20 19:42:31] -rw-r--r--. 2 boinc boinc    590091 Nov 19 18:07 input.tar.gz
[2025-11-20 19:42:31] -rw-r--r--. 2 boinc boinc     15120 Nov 19 18:07 start_atlas.sh
[2025-11-20 19:42:31] -rw-------. 1 boinc boinc 934118669 Nov 20 19:38 HITS.pool.root.1
[2025-11-20 19:42:31] -rw-------. 1 boinc boinc  14807040 Nov 20 19:42 result.tar.gz
19:42:33 (21144): run_atlas exited; CPU time 340123.606575
19:42:33 (21144): called boinc_finish(0)

</stderr_txt>
]]>

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