Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
19:42:39 (17214): wrapper (7.7.26015): starting
19:42:39 (17214): wrapper: running run_atlas (--nthreads 8)
[2025-11-20 19:42:39] Arguments: --nthreads 8
[2025-11-20 19:42:39] Threads: 8
[2025-11-20 19:42:39] Checking for CVMFS
[2025-11-20 19:42:40] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-20 19:42:40] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-20 19:42:40] Running cvmfs_config stat atlas.cern.ch
[2025-11-20 19:42:42] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-20 19:42:42] 2.11.2.0 30743 73431 89480 153088 3 294 13483621 25165825 4620 130560 2 20828296 99.854 12612007 2038 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-11-20 19:42:42] CVMFS is ok
[2025-11-20 19:42:42] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-20 19:42:42] Checking for apptainer binary...
[2025-11-20 19:42:42] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-20 19:42:42] Running /usr/bin/apptainer --version
[2025-11-20 19:42:42] apptainer version 1.3.2-1.el7
[2025-11-20 19:42:42] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-20 19:42:55] cg-vwn349.simple-grid.lan
[2025-11-20 19:42:55] apptainer works
[2025-11-20 19:42:56] Set ATHENA_PROC_NUMBER=8
[2025-11-20 19:42:56] Set ATHENA_CORE_NUMBER=8
[2025-11-20 19:42:56] Starting ATLAS job with PandaID=6891555561
[2025-11-20 19:42:56] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/11 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-21 21:20:04]  *** The last 200 lines of the pilot log: ***
[2025-11-21 21:20:04] 2025-11-21 20:19:29,423 | INFO     | mean y: 2887589.1256648935
[2025-11-21 21:20:04] 2025-11-21 20:19:29,423 | INFO     | intersect: -2900572218.900448
[2025-11-21 21:20:04] 2025-11-21 20:19:29,426 | INFO     | chi2: 12.719228068354028
[2025-11-21 21:20:04] 2025-11-21 20:19:29,428 | INFO     | sum of square deviations: 1044437195394.0216
[2025-11-21 21:20:04] 2025-11-21 20:19:29,492 | INFO     | sum of deviations: 2261289616806.517
[2025-11-21 21:20:04] 2025-11-21 20:19:29,492 | INFO     | mean x: 1763710323.3522348
[2025-11-21 21:20:04] 2025-11-21 20:19:29,493 | INFO     | mean y: 2895218.875917278
[2025-11-21 21:20:04] 2025-11-21 20:19:29,493 | INFO     | intersect: -3815677940.7541103
[2025-11-21 21:20:04] 2025-11-21 20:19:29,495 | INFO     | chi2: 9.335573266008952
[2025-11-21 21:20:04] 2025-11-21 20:19:29,495 | INFO     | current chi2=9.335573266008952 (change=26.602674188724944 %)
[2025-11-21 21:20:04] 2025-11-21 20:19:29,497 | INFO     | sum of square deviations: 1034021274127.3464
[2025-11-21 21:20:04] 2025-11-21 20:19:29,564 | INFO     | sum of deviations: 2831891793952.4336
[2025-11-21 21:20:04] 2025-11-21 20:19:29,564 | INFO     | mean x: 1763710170.8567603
[2025-11-21 21:20:04] 2025-11-21 20:19:29,565 | INFO     | mean y: 2903573.511378849
[2025-11-21 21:20:04] 2025-11-21 20:19:29,565 | INFO     | intersect: -4827399713.986149
[2025-11-21 21:20:04] 2025-11-21 20:19:29,567 | INFO     | chi2: 5.481384300771017
[2025-11-21 21:20:04] 2025-11-21 20:19:29,567 | INFO     | current chi2=5.481384300771017 (change=41.284973674526555 %)
[2025-11-21 21:20:04] 2025-11-21 20:19:29,569 | INFO     | sum of square deviations: 1023674842535.6118
[2025-11-21 21:20:04] 2025-11-21 20:19:29,643 | INFO     | sum of deviations: 3240147078512.937
[2025-11-21 21:20:04] 2025-11-21 20:19:29,644 | INFO     | mean x: 1763710018.3613162
[2025-11-21 21:20:04] 2025-11-21 20:19:29,644 | INFO     | mean y: 2909586.481531229
[2025-11-21 21:20:04] 2025-11-21 20:19:29,644 | INFO     | intersect: -5579605120.221944
[2025-11-21 21:20:04] 2025-11-21 20:19:29,646 | INFO     | chi2: 3.13113212274025
[2025-11-21 21:20:04] 2025-11-21 20:19:29,646 | INFO     | current chi2=3.13113212274025 (change=42.87698232908389 %)
[2025-11-21 21:20:04] 2025-11-21 20:19:29,648 | INFO     | sum of square deviations: 1013397486767.7804
[2025-11-21 21:20:04] 2025-11-21 20:19:29,723 | INFO     | sum of deviations: 3362329667742.433
[2025-11-21 21:20:04] 2025-11-21 20:19:29,724 | INFO     | mean x: 1763709865.8645554
[2025-11-21 21:20:04] 2025-11-21 20:19:29,724 | INFO     | mean y: 2911396.648921833
[2025-11-21 21:20:04] 2025-11-21 20:19:29,724 | INFO     | intersect: -5848863533.443557
[2025-11-21 21:20:04] 2025-11-21 20:19:29,726 | INFO     | chi2: 2.77373785218548
[2025-11-21 21:20:04] 2025-11-21 20:19:29,726 | INFO     | current chi2=2.77373785218548 (change=11.414218772793012 %)
[2025-11-21 21:20:04] 2025-11-21 20:19:29,726 | INFO     | right removable region: 1483
[2025-11-21 21:20:04] 2025-11-21 20:19:29,728 | INFO     | sum of square deviations: 1044435958924.0208
[2025-11-21 21:20:04] 2025-11-21 20:19:29,797 | INFO     | sum of deviations: 1281672400703.7954
[2025-11-21 21:20:04] 2025-11-21 20:19:29,798 | INFO     | mean x: 1763710628.3522348
[2025-11-21 21:20:04] 2025-11-21 20:19:29,798 | INFO     | mean y: 2894202.418945964
[2025-11-21 21:20:04] 2025-11-21 20:19:29,798 | INFO     | intersect: -2161431159.8711247
[2025-11-21 21:20:04] 2025-11-21 20:19:29,800 | INFO     | chi2: 10.308490876479008
[2025-11-21 21:20:04] 2025-11-21 20:19:29,801 | INFO     | current chi2=10.308490876479008 (change=18.953486633933668 %)
[2025-11-21 21:20:04] 2025-11-21 20:19:29,801 | INFO     | left removable region: 10
[2025-11-21 21:20:04] 2025-11-21 20:19:29,803 | INFO     | sum of square deviations: 991028231045.6132
[2025-11-21 21:20:04] 2025-11-21 20:19:29,827 | INFO     | monitor loop #6103: job 0:6891555561 is in state 'finished'
[2025-11-21 21:20:04] 2025-11-21 20:19:29,827 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-21 21:20:04] 2025-11-21 20:19:29,868 | INFO     | sum of deviations: 2798555212984.513
[2025-11-21 21:20:04] 2025-11-21 20:19:29,869 | INFO     | mean x: 1763710140.370672
[2025-11-21 21:20:04] 2025-11-21 20:19:29,869 | INFO     | mean y: 2919926.0210454855
[2025-11-21 21:20:04] 2025-11-21 20:19:29,869 | INFO     | intersect: -4977604394.986732
[2025-11-21 21:20:04] 2025-11-21 20:19:29,871 | INFO     | chi2: 0.21793947981550563
[2025-11-21 21:20:04] 2025-11-21 20:19:29,871 | INFO     | current memory leak: 2.82 B/s (using 1473 data points, chi2=0.22)
[2025-11-21 21:20:04] 2025-11-21 20:19:29,873 | INFO     | could have reported an average CPU frequency of 1999 MHz (51 samples)
[2025-11-21 21:20:04] 2025-11-21 20:19:29,874 | INFO     | ..............................
[2025-11-21 21:20:04] 2025-11-21 20:19:29,874 | INFO     | . Timing measurements:
[2025-11-21 21:20:04] 2025-11-21 20:19:29,874 | INFO     | . get job = 0 s
[2025-11-21 21:20:04] 2025-11-21 20:19:29,874 | INFO     | . initial setup = 9 s
[2025-11-21 21:20:04] 2025-11-21 20:19:29,874 | INFO     | . payload setup = 16 s
[2025-11-21 21:20:04] 2025-11-21 20:19:29,874 | INFO     | . stage-in = 0 s
[2025-11-21 21:20:04] 2025-11-21 20:19:29,874 | INFO     | . payload execution = 91741 s
[2025-11-21 21:20:04] 2025-11-21 20:19:29,874 | INFO     | . stage-out = 4 s
[2025-11-21 21:20:04] 2025-11-21 20:19:29,874 | INFO     | . log creation = 1 s
[2025-11-21 21:20:04] 2025-11-21 20:19:29,874 | INFO     | ..............................
[2025-11-21 21:20:04] 2025-11-21 20:19:30,040 | INFO     | 
[2025-11-21 21:20:04] 2025-11-21 20:19:30,040 | INFO     | job summary report
[2025-11-21 21:20:04] 2025-11-21 20:19:30,040 | INFO     | --------------------------------------------------
[2025-11-21 21:20:04] 2025-11-21 20:19:30,040 | INFO     | PanDA job id: 6891555561
[2025-11-21 21:20:04] 2025-11-21 20:19:30,040 | INFO     | task id: 47493068
[2025-11-21 21:20:04] 2025-11-21 20:19:30,040 | INFO     | errors: (none)
[2025-11-21 21:20:04] 2025-11-21 20:19:30,041 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-21 21:20:04] 2025-11-21 20:19:30,041 | INFO     | pilot state: finished 
[2025-11-21 21:20:04] 2025-11-21 20:19:30,041 | INFO     | transexitcode: 0
[2025-11-21 21:20:04] 2025-11-21 20:19:30,041 | INFO     | exeerrorcode: 0
[2025-11-21 21:20:04] 2025-11-21 20:19:30,041 | INFO     | exeerrordiag: 
[2025-11-21 21:20:04] 2025-11-21 20:19:30,041 | INFO     | exitcode: 0
[2025-11-21 21:20:04] 2025-11-21 20:19:30,041 | INFO     | exitmsg: OK
[2025-11-21 21:20:04] 2025-11-21 20:19:30,041 | INFO     | cpuconsumptiontime: 342530 s
[2025-11-21 21:20:04] 2025-11-21 20:19:30,041 | INFO     | nevents: 1000
[2025-11-21 21:20:04] 2025-11-21 20:19:30,041 | INFO     | neventsw: 0
[2025-11-21 21:20:04] 2025-11-21 20:19:30,042 | INFO     | pid: 27615
[2025-11-21 21:20:04] 2025-11-21 20:19:30,042 | INFO     | pgrp: 27615
[2025-11-21 21:20:04] 2025-11-21 20:19:30,042 | INFO     | corecount: 8
[2025-11-21 21:20:04] 2025-11-21 20:19:30,042 | INFO     | event service: False
[2025-11-21 21:20:04] 2025-11-21 20:19:30,042 | INFO     | sizes: {0: 2298566, 1: 2298650, 2: 2298821, 12: 2298849, 23: 2298877, 34: 2298905, 45: 2299061, 55: 2299089, 66: 2299117, 77: 2299145, 88: 2299201, 99: 2299509, 10
[2025-11-21 21:20:04] 2025-11-21 20:19:30,042 | INFO     | --------------------------------------------------
[2025-11-21 21:20:04] 2025-11-21 20:19:30,042 | INFO     | 
[2025-11-21 21:20:04] 2025-11-21 20:19:30,042 | INFO     | executing command: ls -lF /var/lib/boinc/slots/11
[2025-11-21 21:20:04] 2025-11-21 20:19:30,091 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-21 21:20:04] 2025-11-21 20:19:30,091 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-21 21:20:04] 2025-11-21 20:19:30,091 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-21 21:20:04] 2025-11-21 20:19:30,092 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-21 21:20:04] 2025-11-21 20:19:30,092 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-21 21:20:04] 2025-11-21 20:19:30,092 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-21 21:20:04] 2025-11-21 20:19:30,092 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-21 21:20:04] 2025-11-21 20:19:30,092 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-21 21:20:04] 2025-11-21 20:19:30,092 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-21 21:20:04] 2025-11-21 20:19:30,092 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-21 21:20:04] 2025-11-21 20:19:30,093 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-21 21:20:04] 2025-11-21 20:19:30,093 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-21 21:20:04] 2025-11-21 20:19:30,093 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-21 21:20:04] 2025-11-21 20:19:30,093 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-21 21:20:04] 2025-11-21 20:19:30,093 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-21 21:20:04] 2025-11-21 20:19:30,093 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-21 21:20:04] 2025-11-21 20:19:30,093 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-21 21:20:04] 2025-11-21 20:19:30,093 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-21 21:20:04] 2025-11-21 20:19:30,094 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-21 21:20:04] 2025-11-21 20:19:30,094 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-21 21:20:04] 2025-11-21 20:19:30,094 | INFO     | job 6891555561 has completed (purged errors)
[2025-11-21 21:20:04] 2025-11-21 20:19:30,094 | INFO     | overall cleanup function is called
[2025-11-21 21:20:04] 2025-11-21 20:19:31,112 | INFO     | --- collectZombieJob: --- 10, [27615]
[2025-11-21 21:20:04] 2025-11-21 20:19:31,112 | INFO     | zombie collector waiting for pid 27615
[2025-11-21 21:20:04] 2025-11-21 20:19:31,112 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-21 21:20:04] 2025-11-21 20:19:31,112 | INFO     | collected zombie processes
[2025-11-21 21:20:04] 2025-11-21 20:19:31,112 | INFO     | will attempt to kill all subprocesses of pid=27615
[2025-11-21 21:20:04] 2025-11-21 20:19:31,213 | INFO     | process IDs to be killed: [27615] (in reverse order)
[2025-11-21 21:20:04] 2025-11-21 20:19:31,281 | WARNING  | found no corresponding commands to process id(s)
[2025-11-21 21:20:04] 2025-11-21 20:19:31,281 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-21 21:20:04] 2025-11-21 20:19:31,285 | INFO     | did not find any defunct processes belonging to 27615
[2025-11-21 21:20:04] 2025-11-21 20:19:31,289 | INFO     | did not find any defunct processes belonging to 27615
[2025-11-21 21:20:04] 2025-11-21 20:19:31,291 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-21 21:20:04] 2025-11-21 20:19:31,291 | INFO     | ready for new job
[2025-11-21 21:20:04] 2025-11-21 20:19:31,291 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-21 21:20:04] 2025-11-21 20:19:31,299 | INFO     | ***************************************
[2025-11-21 21:20:04] 2025-11-21 20:19:31,299 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-21 21:20:04] 2025-11-21 20:19:31,299 | INFO     | ***************************************
[2025-11-21 21:20:04] 2025-11-21 20:19:31,300 | INFO     | 
[2025-11-21 21:20:04] 2025-11-21 20:19:31,301 | INFO     | pilot is running in a VM
[2025-11-21 21:20:04] 2025-11-21 20:19:31,301 | INFO     | architecture information:
[2025-11-21 21:20:04] 2025-11-21 20:19:31,301 | INFO     | executing command: cat /etc/os-release
[2025-11-21 21:20:04] 2025-11-21 20:19:31,334 | INFO     | cat /etc/os-release:
[2025-11-21 21:20:04] NAME="CentOS Linux"
[2025-11-21 21:20:04] VERSION="7 (Core)"
[2025-11-21 21:20:04] ID="centos"
[2025-11-21 21:20:04] ID_LIKE="rhel fedora"
[2025-11-21 21:20:04] VERSION_ID="7"
[2025-11-21 21:20:04] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-21 21:20:04] ANSI_COLOR="0;31"
[2025-11-21 21:20:04] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-21 21:20:04] HOME_URL="https://www.centos.org/"
[2025-11-21 21:20:04] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-21 21:20:04] 
[2025-11-21 21:20:04] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-21 21:20:04] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-21 21:20:04] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-21 21:20:04] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-21 21:20:04] 
[2025-11-21 21:20:04] 2025-11-21 20:19:31,334 | INFO     | ***************************************
[2025-11-21 21:20:04] 2025-11-21 20:19:31,838 | INFO     | executing command: df -mP /var/lib/boinc/slots/11
[2025-11-21 21:20:04] 2025-11-21 20:19:31,867 | INFO     | sufficient remaining disk space (494906900480 B)
[2025-11-21 21:20:04] 2025-11-21 20:19:31,868 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-21 21:20:04] 2025-11-21 20:19:31,868 | INFO     | current server update state: UPDATING_FINAL
[2025-11-21 21:20:04] 2025-11-21 20:19:31,868 | INFO     | update_server=False
[2025-11-21 21:20:04] 2025-11-21 20:19:31,868 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-21 21:20:04] 2025-11-21 20:19:31,869 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-21 21:20:04] 2025-11-21 20:19:31,869 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-21 21:20:04] 2025-11-21 20:19:31,870 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-21 21:20:04] 2025-11-21 20:19:31,994 | INFO     | all payload control threads have been joined
[2025-11-21 21:20:04] 2025-11-21 20:19:32,331 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-21 21:20:04] 2025-11-21 20:19:32,331 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-21 21:20:04] 2025-11-21 20:19:32,331 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-21 21:20:04] 2025-11-21 20:19:32,331 | INFO     | will abort loop
[2025-11-21 21:20:04] 2025-11-21 20:19:32,425 | INFO     | all data control threads have been joined
[2025-11-21 21:20:04] 2025-11-21 20:19:32,874 | INFO     | [job] retrieve thread has finished
[2025-11-21 21:20:04] 2025-11-21 20:19:32,879 | INFO     | [job] queue monitor thread has finished
[2025-11-21 21:20:04] 2025-11-21 20:19:32,915 | INFO     | all job control threads have been joined
[2025-11-21 21:20:04] 2025-11-21 20:19:32,999 | INFO     | [payload] control thread has finished
[2025-11-21 21:20:04] 2025-11-21 20:19:33,194 | INFO     | [payload] execute_payloads thread has finished
[2025-11-21 21:20:04] 2025-11-21 20:19:33,338 | INFO     | [job] job monitor thread has finished
[2025-11-21 21:20:04] 2025-11-21 20:19:33,417 | INFO     | [job] validate thread has finished
[2025-11-21 21:20:04] 2025-11-21 20:19:33,430 | INFO     | [data] control thread has finished
[2025-11-21 21:20:04] 2025-11-21 20:19:33,465 | INFO     | [payload] validate_post thread has finished
[2025-11-21 21:20:04] 2025-11-21 20:19:33,514 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-21 21:20:04] 2025-11-21 20:19:33,658 | INFO     | [payload] validate_pre thread has finished
[2025-11-21 21:20:04] 2025-11-21 20:19:33,675 | INFO     | [data] copytool_in thread has finished
[2025-11-21 21:20:04] 2025-11-21 20:19:33,726 | INFO     | [job] create_data_payload thread has finished
[2025-11-21 21:20:04] 2025-11-21 20:19:33,878 | INFO     | [data] copytool_out thread has finished
[2025-11-21 21:20:04] 2025-11-21 20:19:33,920 | INFO     | [job] control thread has finished
[2025-11-21 21:20:04] 2025-11-21 20:19:34,028 | INFO     | [payload] failed_post thread has finished
[2025-11-21 21:20:04] 2025-11-21 20:19:35,881 | INFO     | [data] queue_monitor thread has finished
[2025-11-21 21:20:04] 2025-11-21 20:19:41,806 | INFO     | [monitor] cgroup control has ended
[2025-11-21 21:20:04] 2025-11-21 20:19:43,179 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140037140592448)>', '<ExcThread(monitor, started 140036309763840)>']
[2025-11-21 21:20:04] 2025-11-21 20:19:48,205 | INFO     | all workflow threads have been joined
[2025-11-21 21:20:04] 2025-11-21 20:19:48,205 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-21 21:20:04] 2025-11-21 20:19:48,205 | INFO     | traces error code: 0
[2025-11-21 21:20:04] 2025-11-21 20:19:48,206 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-21 21:20:04] 2025-11-21 20:20:01,749 | INFO     | PID=21004 has CPU usage=2.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-21 21:20:04] 2025-11-21 20:20:01,750 | INFO     | .. there are 9 such processes running
[2025-11-21 21:20:04] 2025-11-21 20:20:01,750 | INFO     | found 0 job(s) in 20 queues
[2025-11-21 21:20:04] 2025-11-21 20:20:01,750 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-21 21:20:04] 2025-11-21 20:20:01,750 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-21 21:20:04] 2025-11-21 20:20:01,750 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-21 21:20:04] 2025-11-21 20:20:01,751 | CRITICAL | thread 'MainThread' is not alive
[2025-11-21 21:20:04] 2025-11-21 20:20:01,751 | INFO     | [monitor] control thread has ended
[2025-11-21 21:20:04] 2025-11-21 20:20:02,012 [wrapper] ==== pilot stdout END ====
[2025-11-21 21:20:04] 2025-11-21 20:20:02,021 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-21 21:20:04] 2025-11-21 20:20:02,052 [wrapper] pilotpid: 21004
[2025-11-21 21:20:04] 2025-11-21 20:20:02,060 [wrapper] Pilot exit status: 0
[2025-11-21 21:20:04] 2025-11-21 20:20:02,220 [wrapper] pandaids: 6891555561
[2025-11-21 21:20:04] 2025-11-21 20:20:02,317 [wrapper] cleanup supervisor_pilot  3926 21005
[2025-11-21 21:20:04] 2025-11-21 20:20:02,326 [wrapper] Test setup, not cleaning
[2025-11-21 21:20:04] 2025-11-21 20:20:02,367 [wrapper] apfmon messages muted
[2025-11-21 21:20:04] 2025-11-21 20:20:02,443 [wrapper] ==== wrapper stdout END ====
[2025-11-21 21:20:04] 2025-11-21 20:20:02,531 [wrapper] ==== wrapper stderr END ====
[2025-11-21 21:20:04]  *** Error codes and diagnostics ***
[2025-11-21 21:20:04]     "exeErrorCode": 0,
[2025-11-21 21:20:04]     "exeErrorDiag": "",
[2025-11-21 21:20:04]     "pilotErrorCode": 0,
[2025-11-21 21:20:04]     "pilotErrorDiag": "",
[2025-11-21 21:20:04]  *** Listing of results directory ***
[2025-11-21 21:20:04] total 1338760
[2025-11-21 21:20:04] -rw-r--r--. 1 boinc boinc    576529 Nov 18 16:15 pilot3.tar.gz
[2025-11-21 21:20:04] -rwx------. 1 boinc boinc     36292 Nov 18 16:20 runpilot2-wrapper.sh
[2025-11-21 21:20:04] -rw-r--r--. 1 boinc boinc      5112 Nov 18 16:20 queuedata.json
[2025-11-21 21:20:04] -rw-r--r--. 1 boinc boinc       100 Nov 20 19:42 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-21 21:20:04] -rwxr-xr-x. 1 boinc boinc      7986 Nov 20 19:42 run_atlas
[2025-11-21 21:20:04] -rw-r--r--. 1 boinc boinc       105 Nov 20 19:42 job.xml
[2025-11-21 21:20:04] -rw-r--r--. 1 boinc boinc      6392 Nov 20 19:42 init_data.xml
[2025-11-21 21:20:04] -rw-r--r--. 2 boinc boinc 410129919 Nov 20 19:42 EVNT.47493065._000034.pool.root.1
[2025-11-21 21:20:04] -rw-r--r--. 2 boinc boinc     15120 Nov 20 19:42 start_atlas.sh
[2025-11-21 21:20:04] drwxrwx--x. 2 boinc boinc        68 Nov 20 19:42 shared
[2025-11-21 21:20:04] -rw-r--r--. 2 boinc boinc    590091 Nov 20 19:42 input.tar.gz
[2025-11-21 21:20:04] -rw-r--r--. 1 boinc boinc         0 Nov 20 19:42 boinc_lockfile
[2025-11-21 21:20:04] -rw-r--r--. 1 boinc boinc      2771 Nov 20 19:42 pandaJob.out
[2025-11-21 21:20:04] -rw-------. 1 boinc boinc    989440 Nov 20 19:46 agis_schedconf.cvmfs.json
[2025-11-21 21:20:04] drwx------. 5 boinc boinc      4096 Nov 20 19:47 pilot3
[2025-11-21 21:20:04] -rw-r--r--. 1 boinc boinc       533 Nov 21 20:56 boinc_task_state.xml
[2025-11-21 21:20:04] -rw-------. 1 boinc boinc 927214841 Nov 21 21:18 HITS.47493068._000332.pool.root.1
[2025-11-21 21:20:04] -rw-------. 1 boinc boinc        95 Nov 21 21:19 pilot_heartbeat.json
[2025-11-21 21:20:04] -rw-------. 1 boinc boinc      1033 Nov 21 21:19 memory_monitor_summary.json
[2025-11-21 21:20:04] -rw-------. 1 boinc boinc   1526164 Nov 21 21:19 agis_ddmendpoints.agis.ALL.json
[2025-11-21 21:20:04] -rw-------. 1 boinc boinc   2567599 Nov 21 21:19 log.47493068._000332.job.log.tgz.1
[2025-11-21 21:20:04] -rw-------. 1 boinc boinc      8634 Nov 21 21:19 heartbeat.json
[2025-11-21 21:20:04] -rw-r--r--. 1 boinc boinc      8192 Nov 21 21:19 boinc_mmap_file
[2025-11-21 21:20:04] -rw-r--r--. 1 boinc boinc        29 Nov 21 21:19 wrapper_checkpoint.txt
[2025-11-21 21:20:04] -rw-------. 1 boinc boinc       890 Nov 21 21:20 pilotlog.txt
[2025-11-21 21:20:04] -rw-------. 1 boinc boinc  12252210 Nov 21 21:20 log.47493068._000332.job.log.1
[2025-11-21 21:20:04] -rw-------. 1 boinc boinc       353 Nov 21 21:20 output.list
[2025-11-21 21:20:04] -rw-r--r--. 1 boinc boinc       620 Nov 21 21:20 runtime_log
[2025-11-21 21:20:04] -rw-------. 1 boinc boinc  14837760 Nov 21 21:20 result.tar.gz
[2025-11-21 21:20:04] -rw-r--r--. 1 boinc boinc      8717 Nov 21 21:20 runtime_log.err
[2025-11-21 21:20:04] -rw-------. 1 boinc boinc       662 Nov 21 21:20 h7SKDmOgcf8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmJGFKDmnYc6Om.diag
[2025-11-21 21:20:04] -rw-r--r--. 1 boinc boinc     20938 Nov 21 21:20 stderr.txt
[2025-11-21 21:20:04] HITS file was successfully produced:
[2025-11-21 21:20:04] -rw-------. 1 boinc boinc 927214841 Nov 21 21:18 shared/HITS.pool.root.1
[2025-11-21 21:20:04]  *** Contents of shared directory: ***
[2025-11-21 21:20:04] total 1321092
[2025-11-21 21:20:04] -rw-r--r--. 2 boinc boinc 410129919 Nov 20 19:42 ATLAS.root_0
[2025-11-21 21:20:04] -rw-r--r--. 2 boinc boinc     15120 Nov 20 19:42 start_atlas.sh
[2025-11-21 21:20:04] -rw-r--r--. 2 boinc boinc    590091 Nov 20 19:42 input.tar.gz
[2025-11-21 21:20:04] -rw-------. 1 boinc boinc 927214841 Nov 21 21:18 HITS.pool.root.1
[2025-11-21 21:20:04] -rw-------. 1 boinc boinc  14837760 Nov 21 21:20 result.tar.gz
21:20:06 (17214): run_atlas exited; CPU time 343028.673753
21:20:06 (17214): called boinc_finish(0)

</stderr_txt>
]]>

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