Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
16:21:35 (4352): wrapper (7.7.26015): starting
16:21:35 (4352): wrapper: running run_atlas (--nthreads 4)
[2025-11-18 16:21:35] Arguments: --nthreads 4
[2025-11-18 16:21:35] Threads: 4
[2025-11-18 16:21:35] Checking for CVMFS
[2025-11-18 16:21:36] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-18 16:21:36] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-18 16:21:36] Running cvmfs_config stat atlas.cern.ch
[2025-11-18 16:21:36] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-18 16:21:36] 2.9.2.0 4548 0 29172 153004 4 1 25225395 36864001 0 130560 0 0 0.000 1292 34918 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-11-18 16:21:36] CVMFS is ok
[2025-11-18 16:21:36] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-18 16:21:36] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-18 16:21:36] Further information can be found at the LHC@home message board.
[2025-11-18 16:21:36] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-18 16:21:36] Checking for apptainer binary...
[2025-11-18 16:21:36] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-18 16:21:36] Running /usr/bin/apptainer --version
[2025-11-18 16:21:36] apptainer version 1.4.1-1.1
[2025-11-18 16:21:36] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-18 16:21:36] thA373a
[2025-11-18 16:21:36] apptainer works
[2025-11-18 16:21:36] Set ATHENA_PROC_NUMBER=4
[2025-11-18 16:21:36] Set ATHENA_CORE_NUMBER=4
[2025-11-18 16:21:36] Starting ATLAS job with PandaID=6891555538
[2025-11-18 16:21:36] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
23:33:00 (2874): wrapper (7.7.26015): starting
23:33:00 (2874): wrapper: running run_atlas (--nthreads 4)
[2025-11-18 23:33:00] Arguments: --nthreads 4
[2025-11-18 23:33:00] Threads: 4
[2025-11-18 23:33:00] This job has been restarted, cleaning up previous attempt
[2025-11-18 23:33:00] Checking for CVMFS
[2025-11-18 23:33:04] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-18 23:33:05] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-18 23:33:05] Running cvmfs_config stat atlas.cern.ch
[2025-11-18 23:33:05] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-18 23:33:05] 2.9.2.0 3072 0 29108 153017 3 1 25842211 36864001 0 130560 0 0 0.000 1292 2460 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-11-18 23:33:05] CVMFS is ok
[2025-11-18 23:33:05] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-18 23:33:05] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-18 23:33:05] Further information can be found at the LHC@home message board.
[2025-11-18 23:33:05] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-18 23:33:05] Checking for apptainer binary...
[2025-11-18 23:33:05] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-18 23:33:05] Running /usr/bin/apptainer --version
[2025-11-18 23:33:05] apptainer version 1.4.1-1.1
[2025-11-18 23:33:05] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-18 23:33:05] thA373a
[2025-11-18 23:33:05] apptainer works
[2025-11-18 23:33:05] Set ATHENA_PROC_NUMBER=4
[2025-11-18 23:33:05] Set ATHENA_CORE_NUMBER=4
[2025-11-18 23:33:05] Starting ATLAS job with PandaID=6891555538
[2025-11-18 23:33:05] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-19 06:31:53]  *** The last 200 lines of the pilot log: ***
[2025-11-19 06:31:53] 2025-11-19 05:31:49,439 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-19 06:31:53] 2025-11-19 05:31:49,439 | INFO     | [monitor] control thread has ended
[2025-11-19 06:31:53] 2025-11-19 05:31:53,476 | INFO     | all workflow threads have been joined
[2025-11-19 06:31:53] 2025-11-19 05:31:53,476 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-19 06:31:53] 2025-11-19 05:31:53,476 | INFO     | traces error code: 0
[2025-11-19 06:31:53] 2025-11-19 05:31:53,477 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-19 06:31:53] 2025-11-19 05:31:53,554 [wrapper] ==== pilot stdout END ====
[2025-11-19 06:31:53] 2025-11-19 05:31:53,558 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-19 06:31:53] 2025-11-19 05:31:53,562 [wrapper] pilotpid: 7214
[2025-11-19 06:31:53] 2025-11-19 05:31:53,566 [wrapper] Pilot exit status: 0
[2025-11-19 06:31:53] 2025-11-19 05:31:53,577 [wrapper] pandaids: 6891555538 6891555538
[2025-11-19 06:31:53] 2025-11-19 05:31:53,599 [wrapper] cleanup supervisor_pilot   58571 7215
[2025-11-19 06:31:53] 2025-11-19 05:31:53,603 [wrapper] Test setup, not cleaning
[2025-11-19 06:31:53] 2025-11-19 05:31:53,607 [wrapper] apfmon messages muted
[2025-11-19 06:31:53] 2025-11-19 05:31:53,611 [wrapper] ==== wrapper stdout END ====
[2025-11-19 06:31:53] 2025-11-19 05:31:53,615 [wrapper] ==== wrapper stderr END ====
[2025-11-19 06:31:53]  *** Error codes and diagnostics ***
[2025-11-19 06:31:53]     "exeErrorCode": 65,
[2025-11-19 06:31:53]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (65); Logfile error in log.EVNTtoHITS: \"Core dump from CoreDumpSvc: Event counter: 251; Run: 284500; Evt: 103398999; Current algorithm: ISF_Kernel_FullG4; Current Function: unknown\"",
[2025-11-19 06:31:53]     "pilotErrorCode": 1305,
[2025-11-19 06:31:53]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (65); Logfile error in log.EVNTtoHITS: \"Core dump from CoreDumpSvc: Event counter: 251; Run: 284500; Evt: 103398999; Curre",
[2025-11-19 06:31:53]  *** Listing of results directory ***
[2025-11-19 06:31:53] total 817632
[2025-11-19 06:31:53] drwx------ 5 boinc boinc      4096 Nov  5 18:16 pilot3
[2025-11-19 06:31:53] -rw-r--r-- 1 boinc boinc    576529 Nov 18 16:15 pilot3.tar.gz
[2025-11-19 06:31:53] -rwx------ 1 boinc boinc     36292 Nov 18 16:20 runpilot2-wrapper.sh
[2025-11-19 06:31:53] -rw-r--r-- 1 boinc boinc      5112 Nov 18 16:20 queuedata.json
[2025-11-19 06:31:53] -rw-r--r-- 1 boinc boinc       100 Nov 18 16:21 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-19 06:31:53] -rwxr-xr-x 1 boinc boinc      7986 Nov 18 16:21 run_atlas
[2025-11-19 06:31:53] -rw-r--r-- 1 boinc boinc       105 Nov 18 16:21 job.xml
[2025-11-19 06:31:53] -rw-r--r-- 3 boinc boinc 411959849 Nov 18 16:21 EVNT.47493065._000031.pool.root.1
[2025-11-19 06:31:53] -rw-r--r-- 3 boinc boinc 411959849 Nov 18 16:21 ATLAS.root_0
[2025-11-19 06:31:53] -rw-r--r-- 2 boinc boinc    590094 Nov 18 16:21 input.tar.gz
[2025-11-19 06:31:53] -rw-r--r-- 2 boinc boinc     15120 Nov 18 16:21 start_atlas.sh
[2025-11-19 06:31:53] drwxrwx--x 2 boinc boinc      4096 Nov 18 16:21 shared
[2025-11-19 06:31:53] -rw-r--r-- 1 boinc boinc         0 Nov 18 16:21 boinc_setup_complete
[2025-11-19 06:31:53] -rw-r--r-- 1 boinc boinc         0 Nov 18 16:21 boinc_lockfile
[2025-11-19 06:31:53] -rw-r--r-- 1 boinc boinc      2771 Nov 18 23:33 pandaJob.out
[2025-11-19 06:31:53] -rw------- 1 boinc boinc    992790 Nov 18 23:33 agis_schedconf.cvmfs.json
[2025-11-19 06:31:53] -rw-r--r-- 1 boinc boinc      6385 Nov 19 03:35 init_data.xml
[2025-11-19 06:31:53] -rw-r--r-- 1 boinc boinc       532 Nov 19 06:27 boinc_task_state.xml
[2025-11-19 06:31:53] -rw------- 1 boinc boinc      1036 Nov 19 06:29 memory_monitor_summary.json
[2025-11-19 06:31:53] -rw------- 1 boinc boinc   1180902 Nov 19 06:29 log.47493068._000309.job.log.tgz.1
[2025-11-19 06:31:53] -rw------- 1 boinc boinc   1525063 Nov 19 06:29 agis_ddmendpoints.agis.ALL.json
[2025-11-19 06:31:53] -rw------- 1 boinc boinc      9696 Nov 19 06:31 heartbeat.json
[2025-11-19 06:31:53] -rw-r--r-- 1 boinc boinc        29 Nov 19 06:31 wrapper_checkpoint.txt
[2025-11-19 06:31:53] -rw-r--r-- 1 boinc boinc      8192 Nov 19 06:31 boinc_mmap_file
[2025-11-19 06:31:53] -rw------- 1 boinc boinc        97 Nov 19 06:31 pilot_heartbeat.json
[2025-11-19 06:31:53] -rw------- 1 boinc boinc      4749 Nov 19 06:31 pilotlog.txt
[2025-11-19 06:31:53] -rw------- 1 boinc boinc   3527941 Nov 19 06:31 log.47493068._000309.job.log.1
[2025-11-19 06:31:53] -rw------- 1 boinc boinc       186 Nov 19 06:31 output.list
[2025-11-19 06:31:53] -rw-r--r-- 1 boinc boinc       620 Nov 19 06:31 runtime_log
[2025-11-19 06:31:53] -rw------- 1 boinc boinc   4730880 Nov 19 06:31 result.tar.gz
[2025-11-19 06:31:53] -rw-r--r-- 1 boinc boinc      8716 Nov 19 06:31 runtime_log.err
[2025-11-19 06:31:53] -rw------- 1 boinc boinc       795 Nov 19 06:31 PaEODmNgcf8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmzFFKDmlZVdNo.diag
[2025-11-19 06:31:53] -rw-r--r-- 1 boinc boinc      6438 Nov 19 06:31 stderr.txt
[2025-11-19 06:31:53] No HITS result produced
[2025-11-19 06:31:53]  *** Contents of shared directory: ***
[2025-11-19 06:31:53] total 407528
[2025-11-19 06:31:53] -rw-r--r-- 3 boinc boinc 411959849 Nov 18 16:21 ATLAS.root_0
[2025-11-19 06:31:53] -rw-r--r-- 2 boinc boinc    590094 Nov 18 16:21 input.tar.gz
[2025-11-19 06:31:53] -rw-r--r-- 2 boinc boinc     15120 Nov 18 16:21 start_atlas.sh
[2025-11-19 06:31:53] -rw------- 1 boinc boinc   4730880 Nov 19 06:31 result.tar.gz
06:31:55 (2874): run_atlas exited; CPU time 98272.748912
06:31:55 (2874): called boinc_finish(0)

</stderr_txt>
]]>

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