Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
17:31:14 (10746): wrapper (7.7.26015): starting
17:31:14 (10746): wrapper: running run_atlas (--nthreads 8)
[2025-11-19 17:31:14] Arguments: --nthreads 8
[2025-11-19 17:31:14] Threads: 8
[2025-11-19 17:31:14] Checking for CVMFS
[2025-11-19 17:31:16] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-19 17:31:16] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-19 17:31:16] Running cvmfs_config stat atlas.cern.ch
[2025-11-19 17:31:19] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-19 17:31:19] 2.11.2.0 570 275371 138452 153051 3 84 20710659 25165825 4251 130560 2 119941442 99.873 79744461 3130 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-11-19 17:31:19] CVMFS is ok
[2025-11-19 17:31:19] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-19 17:31:19] Checking for apptainer binary...
[2025-11-19 17:31:19] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-19 17:31:19] Running /usr/bin/apptainer --version
[2025-11-19 17:31:19] apptainer version 1.3.2-1.el7
[2025-11-19 17:31:19] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-19 17:31:29] cg-vwn366.simple-grid.lan
[2025-11-19 17:31:29] apptainer works
[2025-11-19 17:31:29] Set ATHENA_PROC_NUMBER=8
[2025-11-19 17:31:29] Set ATHENA_CORE_NUMBER=8
[2025-11-19 17:31:29] Starting ATLAS job with PandaID=6891555570
[2025-11-19 17:31:29] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-20 18:53:30]  *** The last 200 lines of the pilot log: ***
[2025-11-20 18:53:30] 2025-11-20 17:52:42,218 | INFO     | monitor loop #6113: job 0:6891555570 is in state 'finished'
[2025-11-20 18:53:30] 2025-11-20 17:52:42,218 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-20 18:53:30] 2025-11-20 17:52:42,599 | INFO     | time since job start (91032s) is within the limit (172800.0s)
[2025-11-20 18:53:30] 2025-11-20 17:52:44,606 | INFO     | time since job start (91034s) is within the limit (172800.0s)
[2025-11-20 18:53:30] 2025-11-20 17:52:44,724 | INFO     | monitor loop #6114: job 0:6891555570 is in state 'finished'
[2025-11-20 18:53:30] 2025-11-20 17:52:44,724 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-20 18:53:30] 2025-11-20 17:52:46,613 | INFO     | time since job start (91036s) is within the limit (172800.0s)
[2025-11-20 18:53:30] 2025-11-20 17:52:47,229 | INFO     | monitor loop #6115: job 0:6891555570 is in state 'finished'
[2025-11-20 18:53:30] 2025-11-20 17:52:47,229 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-20 18:53:30] 2025-11-20 17:52:48,620 | INFO     | time since job start (91038s) is within the limit (172800.0s)
[2025-11-20 18:53:30] 2025-11-20 17:52:49,737 | INFO     | monitor loop #6116: job 0:6891555570 is in state 'finished'
[2025-11-20 18:53:30] 2025-11-20 17:52:49,737 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-20 18:53:30] 2025-11-20 17:52:50,631 | INFO     | time since job start (91040s) is within the limit (172800.0s)
[2025-11-20 18:53:30] 2025-11-20 17:52:52,006 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-20 18:53:30] 2025-11-20 17:52:52,007 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2025-11-20 18:53:30] 2025-11-20 17:52:52,009 | INFO     | using path: /var/lib/boinc/slots/6/PanDA_Pilot-6891555570/memory_monitor_summary.json (trf name=prmon)
[2025-11-20 18:53:30] 2025-11-20 17:52:52,010 | INFO     | extracted standard info from prmon json
[2025-11-20 18:53:30] 2025-11-20 17:52:52,010 | INFO     | extracted standard memory fields from prmon json
[2025-11-20 18:53:30] 2025-11-20 17:52:52,010 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-20 18:53:30] 2025-11-20 17:52:52,048 | INFO     | fitting pss+swap vs Time
[2025-11-20 18:53:30] 2025-11-20 17:52:52,050 | INFO     | sum of square deviations: 1009305072547.9055
[2025-11-20 18:53:30] 2025-11-20 17:52:52,122 | INFO     | sum of deviations: 4022601082266.0054
[2025-11-20 18:53:30] 2025-11-20 17:52:52,123 | INFO     | mean x: 1763615844.7213225
[2025-11-20 18:53:30] 2025-11-20 17:52:52,123 | INFO     | mean y: 2840731.1356275305
[2025-11-20 18:53:30] 2025-11-20 17:52:52,123 | INFO     | intersect: -7026077678.804042
[2025-11-20 18:53:30] 2025-11-20 17:52:52,125 | INFO     | chi2: 22.68492597799905
[2025-11-20 18:53:30] 2025-11-20 17:52:52,127 | INFO     | sum of square deviations: 999124401137.9233
[2025-11-20 18:53:30] 2025-11-20 17:52:52,184 | INFO     | sum of deviations: 4508927489972.716
[2025-11-20 18:53:30] 2025-11-20 17:52:52,185 | INFO     | mean x: 1763615692.225457
[2025-11-20 18:53:30] 2025-11-20 17:52:52,185 | INFO     | mean y: 2848014.9647935005
[2025-11-20 18:53:30] 2025-11-20 17:52:52,185 | INFO     | intersect: -7956136138.926263
[2025-11-20 18:53:30] 2025-11-20 17:52:52,187 | INFO     | chi2: 19.563618929226944
[2025-11-20 18:53:30] 2025-11-20 17:52:52,187 | INFO     | current chi2=19.563618929226944 (change=13.759388290705918 %)
[2025-11-20 18:53:30] 2025-11-20 17:52:52,187 | INFO     | right removable region: 1476
[2025-11-20 18:53:30] 2025-11-20 17:52:52,190 | INFO     | sum of square deviations: 999123297037.9224
[2025-11-20 18:53:30] 2025-11-20 17:52:52,256 | INFO     | monitor loop #6117: job 0:6891555570 is in state 'finished'
[2025-11-20 18:53:30] 2025-11-20 17:52:52,256 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-20 18:53:30] 2025-11-20 17:52:52,284 | INFO     | sum of deviations: 3397582180438.372
[2025-11-20 18:53:30] 2025-11-20 17:52:52,285 | INFO     | mean x: 1763615997.225457
[2025-11-20 18:53:30] 2025-11-20 17:52:52,285 | INFO     | mean y: 2850092.272173324
[2025-11-20 18:53:30] 2025-11-20 17:52:52,285 | INFO     | intersect: -5994438033.301212
[2025-11-20 18:53:30] 2025-11-20 17:52:52,287 | INFO     | chi2: 17.87572384339539
[2025-11-20 18:53:30] 2025-11-20 17:52:52,287 | INFO     | current chi2=17.87572384339539 (change=21.199990422132554 %)
[2025-11-20 18:53:30] 2025-11-20 17:52:52,287 | INFO     | left removable region: 10
[2025-11-20 18:53:30] 2025-11-20 17:52:52,290 | INFO     | sum of square deviations: 976966208735.7803
[2025-11-20 18:53:30] 2025-11-20 17:52:52,363 | INFO     | sum of deviations: 3459055749960.5854
[2025-11-20 18:53:30] 2025-11-20 17:52:52,364 | INFO     | mean x: 1763615966.734652
[2025-11-20 18:53:30] 2025-11-20 17:52:52,364 | INFO     | mean y: 2867417.492496589
[2025-11-20 18:53:30] 2025-11-20 17:52:52,364 | INFO     | intersect: -6241407866.449955
[2025-11-20 18:53:30] 2025-11-20 17:52:52,365 | INFO     | chi2: 10.333448700918508
[2025-11-20 18:53:30] 2025-11-20 17:52:52,366 | INFO     | current memory leak: 3.54 B/s (using 1466 data points, chi2=10.33)
[2025-11-20 18:53:30] 2025-11-20 17:52:52,368 | INFO     | could have reported an average CPU frequency of 1999 MHz (50 samples)
[2025-11-20 18:53:30] 2025-11-20 17:52:52,368 | INFO     | ..............................
[2025-11-20 18:53:30] 2025-11-20 17:52:52,368 | INFO     | . Timing measurements:
[2025-11-20 18:53:30] 2025-11-20 17:52:52,369 | INFO     | . get job = 0 s
[2025-11-20 18:53:30] 2025-11-20 17:52:52,369 | INFO     | . initial setup = 7 s
[2025-11-20 18:53:30] 2025-11-20 17:52:52,369 | INFO     | . payload setup = 170 s
[2025-11-20 18:53:30] 2025-11-20 17:52:52,369 | INFO     | . stage-in = 0 s
[2025-11-20 18:53:30] 2025-11-20 17:52:52,369 | INFO     | . payload execution = 90556 s
[2025-11-20 18:53:30] 2025-11-20 17:52:52,369 | INFO     | . stage-out = 6 s
[2025-11-20 18:53:30] 2025-11-20 17:52:52,369 | INFO     | . log creation = 2 s
[2025-11-20 18:53:30] 2025-11-20 17:52:52,369 | INFO     | ..............................
[2025-11-20 18:53:30] 2025-11-20 17:52:52,513 | INFO     | 
[2025-11-20 18:53:30] 2025-11-20 17:52:52,513 | INFO     | job summary report
[2025-11-20 18:53:30] 2025-11-20 17:52:52,514 | INFO     | --------------------------------------------------
[2025-11-20 18:53:30] 2025-11-20 17:52:52,514 | INFO     | PanDA job id: 6891555570
[2025-11-20 18:53:30] 2025-11-20 17:52:52,514 | INFO     | task id: 47493068
[2025-11-20 18:53:30] 2025-11-20 17:52:52,514 | INFO     | errors: (none)
[2025-11-20 18:53:30] 2025-11-20 17:52:52,514 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-20 18:53:30] 2025-11-20 17:52:52,514 | INFO     | pilot state: finished 
[2025-11-20 18:53:30] 2025-11-20 17:52:52,514 | INFO     | transexitcode: 0
[2025-11-20 18:53:30] 2025-11-20 17:52:52,514 | INFO     | exeerrorcode: 0
[2025-11-20 18:53:30] 2025-11-20 17:52:52,514 | INFO     | exeerrordiag: 
[2025-11-20 18:53:30] 2025-11-20 17:52:52,514 | INFO     | exitcode: 0
[2025-11-20 18:53:30] 2025-11-20 17:52:52,515 | INFO     | exitmsg: OK
[2025-11-20 18:53:30] 2025-11-20 17:52:52,515 | INFO     | cpuconsumptiontime: 337773 s
[2025-11-20 18:53:30] 2025-11-20 17:52:52,515 | INFO     | nevents: 1000
[2025-11-20 18:53:30] 2025-11-20 17:52:52,515 | INFO     | neventsw: 0
[2025-11-20 18:53:30] 2025-11-20 17:52:52,515 | INFO     | pid: 21138
[2025-11-20 18:53:30] 2025-11-20 17:52:52,515 | INFO     | pgrp: 21138
[2025-11-20 18:53:30] 2025-11-20 17:52:52,515 | INFO     | corecount: 8
[2025-11-20 18:53:30] 2025-11-20 17:52:52,515 | INFO     | event service: False
[2025-11-20 18:53:30] 2025-11-20 17:52:52,515 | INFO     | sizes: {0: 2296362, 1: 2297047, 2: 2297246, 13: 2297246, 24: 2297302, 34: 2297330, 45: 2297486, 56: 2297514, 66: 2297542, 77: 2297570, 88: 2297626, 99: 2298224, 10
[2025-11-20 18:53:30] 2025-11-20 17:52:52,516 | INFO     | --------------------------------------------------
[2025-11-20 18:53:30] 2025-11-20 17:52:52,516 | INFO     | 
[2025-11-20 18:53:30] 2025-11-20 17:52:52,516 | INFO     | executing command: ls -lF /var/lib/boinc/slots/6
[2025-11-20 18:53:30] 2025-11-20 17:52:52,639 | INFO     | time since job start (91042s) is within the limit (172800.0s)
[2025-11-20 18:53:30] 2025-11-20 17:52:53,045 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-20 18:53:30] 2025-11-20 17:52:53,046 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-20 18:53:30] 2025-11-20 17:52:53,046 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-20 18:53:30] 2025-11-20 17:52:53,046 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-20 18:53:30] 2025-11-20 17:52:53,046 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-20 18:53:30] 2025-11-20 17:52:53,046 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-20 18:53:30] 2025-11-20 17:52:53,046 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-20 18:53:30] 2025-11-20 17:52:53,046 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-20 18:53:30] 2025-11-20 17:52:53,046 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-20 18:53:30] 2025-11-20 17:52:53,046 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-20 18:53:30] 2025-11-20 17:52:53,047 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-20 18:53:30] 2025-11-20 17:52:53,047 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-20 18:53:30] 2025-11-20 17:52:53,047 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-20 18:53:30] 2025-11-20 17:52:53,047 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-20 18:53:30] 2025-11-20 17:52:53,047 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-20 18:53:30] 2025-11-20 17:52:53,047 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-20 18:53:30] 2025-11-20 17:52:53,047 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-20 18:53:30] 2025-11-20 17:52:53,047 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-20 18:53:30] 2025-11-20 17:52:53,047 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-20 18:53:30] 2025-11-20 17:52:53,047 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-20 18:53:30] 2025-11-20 17:52:53,048 | INFO     | job 6891555570 has completed (purged errors)
[2025-11-20 18:53:30] 2025-11-20 17:52:53,048 | INFO     | overall cleanup function is called
[2025-11-20 18:53:30] 2025-11-20 17:52:54,066 | INFO     | --- collectZombieJob: --- 10, [21138]
[2025-11-20 18:53:30] 2025-11-20 17:52:54,066 | INFO     | zombie collector waiting for pid 21138
[2025-11-20 18:53:30] 2025-11-20 17:52:54,066 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-20 18:53:30] 2025-11-20 17:52:54,066 | INFO     | collected zombie processes
[2025-11-20 18:53:30] 2025-11-20 17:52:54,066 | INFO     | will attempt to kill all subprocesses of pid=21138
[2025-11-20 18:53:30] 2025-11-20 17:52:54,202 | INFO     | process IDs to be killed: [21138] (in reverse order)
[2025-11-20 18:53:30] 2025-11-20 17:52:55,105 | WARNING  | found no corresponding commands to process id(s)
[2025-11-20 18:53:30] 2025-11-20 17:52:55,106 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-20 18:53:30] 2025-11-20 17:52:55,110 | INFO     | did not find any defunct processes belonging to 21138
[2025-11-20 18:53:30] 2025-11-20 17:52:55,113 | INFO     | did not find any defunct processes belonging to 21138
[2025-11-20 18:53:30] 2025-11-20 17:52:55,141 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-20 18:53:30] 2025-11-20 17:52:55,141 | INFO     | ready for new job
[2025-11-20 18:53:30] 2025-11-20 17:52:55,142 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-20 18:53:30] 2025-11-20 17:52:55,148 | INFO     | ***************************************
[2025-11-20 18:53:30] 2025-11-20 17:52:55,149 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-20 18:53:30] 2025-11-20 17:52:55,149 | INFO     | ***************************************
[2025-11-20 18:53:30] 2025-11-20 17:52:55,149 | INFO     | 
[2025-11-20 18:53:30] 2025-11-20 17:52:55,150 | INFO     | pilot is running in a VM
[2025-11-20 18:53:30] 2025-11-20 17:52:55,150 | INFO     | architecture information:
[2025-11-20 18:53:30] 2025-11-20 17:52:55,153 | INFO     | executing command: cat /etc/os-release
[2025-11-20 18:53:30] 2025-11-20 17:52:55,425 | INFO     | cat /etc/os-release:
[2025-11-20 18:53:30] NAME="CentOS Linux"
[2025-11-20 18:53:30] VERSION="7 (Core)"
[2025-11-20 18:53:30] ID="centos"
[2025-11-20 18:53:30] ID_LIKE="rhel fedora"
[2025-11-20 18:53:30] VERSION_ID="7"
[2025-11-20 18:53:30] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-20 18:53:30] ANSI_COLOR="0;31"
[2025-11-20 18:53:30] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-20 18:53:30] HOME_URL="https://www.centos.org/"
[2025-11-20 18:53:30] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-20 18:53:30] 
[2025-11-20 18:53:30] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-20 18:53:30] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-20 18:53:30] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-20 18:53:30] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-20 18:53:30] 
[2025-11-20 18:53:30] 2025-11-20 17:52:55,426 | INFO     | ***************************************
[2025-11-20 18:53:30] 2025-11-20 17:52:55,930 | INFO     | executing command: df -mP /var/lib/boinc/slots/6
[2025-11-20 18:53:30] 2025-11-20 17:52:56,202 | INFO     | sufficient remaining disk space (493852033024 B)
[2025-11-20 18:53:30] 2025-11-20 17:52:56,203 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-20 18:53:30] 2025-11-20 17:52:56,203 | INFO     | current server update state: UPDATING_FINAL
[2025-11-20 18:53:30] 2025-11-20 17:52:56,203 | INFO     | update_server=False
[2025-11-20 18:53:30] 2025-11-20 17:52:56,203 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-20 18:53:30] 2025-11-20 17:52:56,211 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-20 18:53:30] 2025-11-20 17:52:56,211 | INFO     | aborting loop
[2025-11-20 18:53:30] 2025-11-20 17:52:56,287 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-20 18:53:30] 2025-11-20 17:52:56,438 | INFO     | all data control threads have been joined
[2025-11-20 18:53:30] 2025-11-20 17:52:57,051 | INFO     | all payload control threads have been joined
[2025-11-20 18:53:30] 2025-11-20 17:52:57,210 | INFO     | [job] retrieve thread has finished
[2025-11-20 18:53:30] 2025-11-20 17:52:57,216 | INFO     | [job] job monitor thread has finished
[2025-11-20 18:53:30] 2025-11-20 17:52:57,437 | INFO     | [payload] validate_pre thread has finished
[2025-11-20 18:53:30] 2025-11-20 17:52:57,444 | INFO     | [data] control thread has finished
[2025-11-20 18:53:30] 2025-11-20 17:52:57,481 | INFO     | [job] create_data_payload thread has finished
[2025-11-20 18:53:30] 2025-11-20 17:52:57,534 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-20 18:53:30] 2025-11-20 17:52:57,622 | INFO     | [payload] validate_post thread has finished
[2025-11-20 18:53:30] 2025-11-20 17:52:57,626 | INFO     | all job control threads have been joined
[2025-11-20 18:53:30] 2025-11-20 17:52:57,744 | INFO     | [payload] execute_payloads thread has finished
[2025-11-20 18:53:30] 2025-11-20 17:52:57,860 | INFO     | [data] copytool_in thread has finished
[2025-11-20 18:53:30] 2025-11-20 17:52:58,057 | INFO     | [payload] control thread has finished
[2025-11-20 18:53:30] 2025-11-20 17:52:58,139 | INFO     | [payload] failed_post thread has finished
[2025-11-20 18:53:30] 2025-11-20 17:52:58,200 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-20 18:53:30] 2025-11-20 17:52:58,286 | INFO     | [job] validate thread has finished
[2025-11-20 18:53:30] 2025-11-20 17:52:58,294 | INFO     | [data] copytool_out thread has finished
[2025-11-20 18:53:30] 2025-11-20 17:52:58,345 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-20 18:53:30] 2025-11-20 17:52:58,540 | INFO     | [job] queue monitor thread has finished
[2025-11-20 18:53:30] 2025-11-20 17:52:58,631 | INFO     | [job] control thread has finished
[2025-11-20 18:53:30] 2025-11-20 17:53:02,355 | INFO     | [data] queue_monitor thread has finished
[2025-11-20 18:53:30] 2025-11-20 17:53:09,206 | INFO     | [monitor] cgroup control has ended
[2025-11-20 18:53:30] 2025-11-20 17:53:10,904 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139777209993024)>', '<ExcThread(monitor, started 139776548136704)>']
[2025-11-20 18:53:30] 2025-11-20 17:53:15,930 | INFO     | all workflow threads have been joined
[2025-11-20 18:53:30] 2025-11-20 17:53:15,930 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-20 18:53:30] 2025-11-20 17:53:15,930 | INFO     | traces error code: 0
[2025-11-20 18:53:30] 2025-11-20 17:53:15,931 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-20 18:53:30] 2025-11-20 17:53:25,853 | INFO     | PID=14536 has CPU usage=2.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-20 18:53:30] 2025-11-20 17:53:25,853 | INFO     | .. there are 9 such processes running
[2025-11-20 18:53:30] 2025-11-20 17:53:25,854 | INFO     | found 0 job(s) in 20 queues
[2025-11-20 18:53:30] 2025-11-20 17:53:25,854 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-20 18:53:30] 2025-11-20 17:53:25,854 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-20 18:53:30] 2025-11-20 17:53:25,854 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-20 18:53:30] 2025-11-20 17:53:25,854 | INFO     | [monitor] control thread has ended
[2025-11-20 18:53:30] 2025-11-20 17:53:26,196 [wrapper] ==== pilot stdout END ====
[2025-11-20 18:53:30] 2025-11-20 17:53:26,294 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-20 18:53:30] 2025-11-20 17:53:26,374 [wrapper] pilotpid: 14536
[2025-11-20 18:53:30] 2025-11-20 17:53:26,420 [wrapper] Pilot exit status: 0
[2025-11-20 18:53:30] 2025-11-20 17:53:26,752 [wrapper] pandaids: 6891555570
[2025-11-20 18:53:30] 2025-11-20 17:53:27,498 [wrapper] cleanup supervisor_pilot 28055 14537
[2025-11-20 18:53:30] 2025-11-20 17:53:27,603 [wrapper] Test setup, not cleaning
[2025-11-20 18:53:30] 2025-11-20 17:53:27,727 [wrapper] apfmon messages muted
[2025-11-20 18:53:30] 2025-11-20 17:53:27,863 [wrapper] ==== wrapper stdout END ====
[2025-11-20 18:53:30] 2025-11-20 17:53:27,983 [wrapper] ==== wrapper stderr END ====
[2025-11-20 18:53:30]  *** Error codes and diagnostics ***
[2025-11-20 18:53:30]     "exeErrorCode": 0,
[2025-11-20 18:53:30]     "exeErrorDiag": "",
[2025-11-20 18:53:30]     "pilotErrorCode": 0,
[2025-11-20 18:53:30]     "pilotErrorDiag": "",
[2025-11-20 18:53:30]  *** Listing of results directory ***
[2025-11-20 18:53:30] total 1325820
[2025-11-20 18:53:30] -rw-r--r--. 1 boinc boinc    598293 Nov  6 09:41 pilot3.tar.gz
[2025-11-20 18:53:30] -rw-r--r--. 1 boinc boinc      5112 Nov 18 16:15 queuedata.json
[2025-11-20 18:53:30] -rwx------. 1 boinc boinc     36292 Nov 18 16:18 runpilot2-wrapper.sh
[2025-11-20 18:53:30] -rw-r--r--. 1 boinc boinc       100 Nov 19 17:31 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-20 18:53:30] -rwxr-xr-x. 1 boinc boinc      7986 Nov 19 17:31 run_atlas
[2025-11-20 18:53:30] -rw-r--r--. 1 boinc boinc       105 Nov 19 17:31 job.xml
[2025-11-20 18:53:30] -rw-r--r--. 1 boinc boinc      6388 Nov 19 17:31 init_data.xml
[2025-11-20 18:53:30] -rw-r--r--. 2 boinc boinc 411244302 Nov 19 17:31 EVNT.47493065._000035.pool.root.1
[2025-11-20 18:53:30] -rw-r--r--. 2 boinc boinc     15120 Nov 19 17:31 start_atlas.sh
[2025-11-20 18:53:30] drwxrwx--x. 2 boinc boinc        68 Nov 19 17:31 shared
[2025-11-20 18:53:30] -rw-r--r--. 2 boinc boinc    611276 Nov 19 17:31 input.tar.gz
[2025-11-20 18:53:30] -rw-r--r--. 1 boinc boinc         0 Nov 19 17:31 boinc_lockfile
[2025-11-20 18:53:30] -rw-r--r--. 1 boinc boinc      2768 Nov 19 17:31 pandaJob.out
[2025-11-20 18:53:30] -rw-------. 1 boinc boinc    989426 Nov 19 17:35 agis_schedconf.cvmfs.json
[2025-11-20 18:53:30] drwx------. 7 boinc boinc      4096 Nov 19 17:35 pilot3
[2025-11-20 18:53:30] -rw-r--r--. 1 boinc boinc       533 Nov 20 18:28 boinc_task_state.xml
[2025-11-20 18:53:30] -rw-------. 1 boinc boinc 913114554 Nov 20 18:50 HITS.47493068._000341.pool.root.1
[2025-11-20 18:53:30] -rw-------. 1 boinc boinc      1031 Nov 20 18:51 memory_monitor_summary.json
[2025-11-20 18:53:30] -rw-------. 1 boinc boinc   1526164 Nov 20 18:51 agis_ddmendpoints.agis.ALL.json
[2025-11-20 18:53:30] -rw-------. 1 boinc boinc   2548285 Nov 20 18:51 log.47493068._000341.job.log.tgz.1
[2025-11-20 18:53:30] -rw-------. 1 boinc boinc        95 Nov 20 18:52 pilot_heartbeat.json
[2025-11-20 18:53:30] -rw-------. 1 boinc boinc      8625 Nov 20 18:52 heartbeat.json
[2025-11-20 18:53:30] -rw-r--r--. 1 boinc boinc      8192 Nov 20 18:53 boinc_mmap_file
[2025-11-20 18:53:30] -rw-r--r--. 1 boinc boinc        29 Nov 20 18:53 wrapper_checkpoint.txt
[2025-11-20 18:53:30] -rw-------. 1 boinc boinc       820 Nov 20 18:53 pilotlog.txt
[2025-11-20 18:53:30] -rw-------. 1 boinc boinc  12119868 Nov 20 18:53 log.47493068._000341.job.log.1
[2025-11-20 18:53:30] -rw-------. 1 boinc boinc       353 Nov 20 18:53 output.list
[2025-11-20 18:53:30] -rw-r--r--. 1 boinc boinc       620 Nov 20 18:53 runtime_log
[2025-11-20 18:53:30] -rw-------. 1 boinc boinc  14684160 Nov 20 18:53 result.tar.gz
[2025-11-20 18:53:30] -rw-r--r--. 1 boinc boinc      8703 Nov 20 18:53 runtime_log.err
[2025-11-20 18:53:30] -rw-------. 1 boinc boinc       662 Nov 20 18:53 2HBLDmRecf8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmdFFKDmaTu5Uo.diag
[2025-11-20 18:53:30] -rw-r--r--. 1 boinc boinc     21438 Nov 20 18:53 stderr.txt
[2025-11-20 18:53:30] HITS file was successfully produced:
[2025-11-20 18:53:30] -rw-------. 1 boinc boinc 913114554 Nov 20 18:50 shared/HITS.pool.root.1
[2025-11-20 18:53:30]  *** Contents of shared directory: ***
[2025-11-20 18:53:30] total 1308280
[2025-11-20 18:53:30] -rw-r--r--. 2 boinc boinc 411244302 Nov 19 17:31 ATLAS.root_0
[2025-11-20 18:53:30] -rw-r--r--. 2 boinc boinc     15120 Nov 19 17:31 start_atlas.sh
[2025-11-20 18:53:30] -rw-r--r--. 2 boinc boinc    611276 Nov 19 17:31 input.tar.gz
[2025-11-20 18:53:30] -rw-------. 1 boinc boinc 913114554 Nov 20 18:50 HITS.pool.root.1
[2025-11-20 18:53:30] -rw-------. 1 boinc boinc  14684160 Nov 20 18:53 result.tar.gz
18:53:32 (10746): run_atlas exited; CPU time 338317.146212
18:53:32 (10746): called boinc_finish(0)

</stderr_txt>
]]>

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