Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
00:58:19 (9027): wrapper (7.7.26015): starting
00:58:19 (9027): wrapper: running run_atlas (--nthreads 8)
[2025-11-20 00:58:19] Arguments: --nthreads 8
[2025-11-20 00:58:19] Threads: 8
[2025-11-20 00:58:19] Checking for CVMFS
[2025-11-20 00:58:20] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-20 00:58:21] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-20 00:58:21] Running cvmfs_config stat atlas.cern.ch
[2025-11-20 00:58:22] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-20 00:58:22] 2.11.2.0 30456 275814 143812 153062 3 281 24927461 25165824 4608 130560 3 117065811 99.867 77081185 3048 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-11-20 00:58:22] CVMFS is ok
[2025-11-20 00:58:22] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-20 00:58:22] Checking for apptainer binary...
[2025-11-20 00:58:22] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-20 00:58:22] Running /usr/bin/apptainer --version
[2025-11-20 00:58:22] apptainer version 1.3.2-1.el7
[2025-11-20 00:58:22] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-20 00:58:31] cg-vwn385.simple-grid.lan
[2025-11-20 00:58:31] apptainer works
[2025-11-20 00:58:31] Set ATHENA_PROC_NUMBER=8
[2025-11-20 00:58:31] Set ATHENA_CORE_NUMBER=8
[2025-11-20 00:58:31] Starting ATLAS job with PandaID=6891555405
[2025-11-20 00:58:31] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/12 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-21 02:24:33]  *** The last 200 lines of the pilot log: ***
[2025-11-21 02:24:33] 2025-11-21 01:23:56,568 | INFO     | time since job start (91396s) is within the limit (172800.0s)
[2025-11-21 02:24:33] 2025-11-21 01:23:56,817 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-21 02:24:33] 2025-11-21 01:23:56,818 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2025-11-21 02:24:33] 2025-11-21 01:23:56,820 | INFO     | using path: /var/lib/boinc/slots/12/PanDA_Pilot-6891555405/memory_monitor_summary.json (trf name=prmon)
[2025-11-21 02:24:33] 2025-11-21 01:23:56,821 | INFO     | extracted standard info from prmon json
[2025-11-21 02:24:33] 2025-11-21 01:23:56,821 | INFO     | extracted standard memory fields from prmon json
[2025-11-21 02:24:33] 2025-11-21 01:23:56,821 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-21 02:24:33] 2025-11-21 01:23:56,849 | INFO     | fitting pss+swap vs Time
[2025-11-21 02:24:33] 2025-11-21 01:23:56,852 | INFO     | sum of square deviations: 1040261405614.5697
[2025-11-21 02:24:33] 2025-11-21 01:23:56,930 | INFO     | sum of deviations: 4301215935813.617
[2025-11-21 02:24:33] 2025-11-21 01:23:56,930 | INFO     | mean x: 1763642533.3413494
[2025-11-21 02:24:33] 2025-11-21 01:23:56,930 | INFO     | mean y: 2870160.225784903
[2025-11-21 02:24:33] 2025-11-21 01:23:56,931 | INFO     | intersect: -7289342478.389734
[2025-11-21 02:24:33] 2025-11-21 01:23:56,932 | INFO     | chi2: 9.882130895620493
[2025-11-21 02:24:33] 2025-11-21 01:23:56,935 | INFO     | sum of square deviations: 1029873302330.5452
[2025-11-21 02:24:33] 2025-11-21 01:23:56,999 | INFO     | sum of deviations: 4799658483120.343
[2025-11-21 02:24:33] 2025-11-21 01:23:57,000 | INFO     | mean x: 1763642380.8458445
[2025-11-21 02:24:33] 2025-11-21 01:23:57,000 | INFO     | mean y: 2877478.597184987
[2025-11-21 02:24:33] 2025-11-21 01:23:57,000 | INFO     | intersect: -8216464740.74355
[2025-11-21 02:24:33] 2025-11-21 01:23:57,002 | INFO     | chi2: 6.80625677015926
[2025-11-21 02:24:33] 2025-11-21 01:23:57,002 | INFO     | current chi2=6.80625677015926 (change=31.125616103955693 %)
[2025-11-21 02:24:33] 2025-11-21 01:23:57,005 | INFO     | sum of square deviations: 1019554595696.4587
[2025-11-21 02:24:33] 2025-11-21 01:23:57,069 | INFO     | sum of deviations: 5080922963660.094
[2025-11-21 02:24:33] 2025-11-21 01:23:57,069 | INFO     | mean x: 1763642228.35037
[2025-11-21 02:24:33] 2025-11-21 01:23:57,069 | INFO     | mean y: 2881631.272360457
[2025-11-21 02:24:33] 2025-11-21 01:23:57,070 | INFO     | intersect: -8786182079.028345
[2025-11-21 02:24:33] 2025-11-21 01:23:57,072 | INFO     | chi2: 5.442485507618242
[2025-11-21 02:24:33] 2025-11-21 01:23:57,072 | INFO     | current chi2=5.442485507618242 (change=20.03702341234339 %)
[2025-11-21 02:24:33] 2025-11-21 01:23:57,073 | INFO     | right removable region: 1486
[2025-11-21 02:24:33] 2025-11-21 01:23:57,075 | INFO     | sum of square deviations: 1029872077450.5435
[2025-11-21 02:24:33] 2025-11-21 01:23:57,136 | INFO     | sum of deviations: 3724330075687.4136
[2025-11-21 02:24:33] 2025-11-21 01:23:57,137 | INFO     | mean x: 1763642685.8458445
[2025-11-21 02:24:33] 2025-11-21 01:23:57,137 | INFO     | mean y: 2878627.058310992
[2025-11-21 02:24:33] 2025-11-21 01:23:57,137 | INFO     | intersect: -6374988723.148817
[2025-11-21 02:24:33] 2025-11-21 01:23:57,139 | INFO     | chi2: 6.031092650954272
[2025-11-21 02:24:33] 2025-11-21 01:23:57,139 | INFO     | current chi2=6.031092650954272 (change=38.969714987006526 %)
[2025-11-21 02:24:33] 2025-11-21 01:23:57,141 | INFO     | sum of square deviations: 1019552327597.8556
[2025-11-21 02:24:33] 2025-11-21 01:23:57,214 | INFO     | sum of deviations: 3436460586069.413
[2025-11-21 02:24:33] 2025-11-21 01:23:57,215 | INFO     | mean x: 1763642838.3490248
[2025-11-21 02:24:33] 2025-11-21 01:23:57,215 | INFO     | mean y: 2882877.2400806993
[2025-11-21 02:24:33] 2025-11-21 01:23:57,215 | INFO     | intersect: -5941578174.768369
[2025-11-21 02:24:33] 2025-11-21 01:23:57,217 | INFO     | chi2: 4.955347885175084
[2025-11-21 02:24:33] 2025-11-21 01:23:57,217 | INFO     | current chi2=4.955347885175084 (change=17.836647984656278 %)
[2025-11-21 02:24:33] 2025-11-21 01:23:57,217 | INFO     | left removable region: 20
[2025-11-21 02:24:33] 2025-11-21 01:23:57,219 | INFO     | sum of square deviations: 976964863763.0542
[2025-11-21 02:24:33] 2025-11-21 01:23:57,278 | INFO     | sum of deviations: 4024748737449.4517
[2025-11-21 02:24:33] 2025-11-21 01:23:57,279 | INFO     | mean x: 1763642807.8594816
[2025-11-21 02:24:33] 2025-11-21 01:23:57,279 | INFO     | mean y: 2897725.0750341066
[2025-11-21 02:24:33] 2025-11-21 01:23:57,281 | INFO     | intersect: -7262685130.0785
[2025-11-21 02:24:33] 2025-11-21 01:23:57,283 | INFO     | chi2: 0.3609754924578189
[2025-11-21 02:24:33] 2025-11-21 01:23:57,283 | INFO     | current memory leak: 4.12 B/s (using 1466 data points, chi2=0.36)
[2025-11-21 02:24:33] 2025-11-21 01:23:57,284 | INFO     | could have reported an average CPU frequency of 1999 MHz (50 samples)
[2025-11-21 02:24:33] 2025-11-21 01:23:57,285 | INFO     | ..............................
[2025-11-21 02:24:33] 2025-11-21 01:23:57,285 | INFO     | . Timing measurements:
[2025-11-21 02:24:33] 2025-11-21 01:23:57,285 | INFO     | . get job = 0 s
[2025-11-21 02:24:33] 2025-11-21 01:23:57,285 | INFO     | . initial setup = 2 s
[2025-11-21 02:24:33] 2025-11-21 01:23:57,285 | INFO     | . payload setup = 16 s
[2025-11-21 02:24:33] 2025-11-21 01:23:57,285 | INFO     | . stage-in = 0 s
[2025-11-21 02:24:33] 2025-11-21 01:23:57,285 | INFO     | . payload execution = 91339 s
[2025-11-21 02:24:33] 2025-11-21 01:23:57,285 | INFO     | . stage-out = 4 s
[2025-11-21 02:24:33] 2025-11-21 01:23:57,285 | INFO     | . log creation = 1 s
[2025-11-21 02:24:33] 2025-11-21 01:23:57,285 | INFO     | ..............................
[2025-11-21 02:24:33] 2025-11-21 01:23:57,417 | INFO     | 
[2025-11-21 02:24:33] 2025-11-21 01:23:57,417 | INFO     | job summary report
[2025-11-21 02:24:33] 2025-11-21 01:23:57,417 | INFO     | --------------------------------------------------
[2025-11-21 02:24:33] 2025-11-21 01:23:57,418 | INFO     | PanDA job id: 6891555405
[2025-11-21 02:24:33] 2025-11-21 01:23:57,418 | INFO     | task id: 47493068
[2025-11-21 02:24:33] 2025-11-21 01:23:57,418 | INFO     | errors: (none)
[2025-11-21 02:24:33] 2025-11-21 01:23:57,418 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-21 02:24:33] 2025-11-21 01:23:57,418 | INFO     | pilot state: finished 
[2025-11-21 02:24:33] 2025-11-21 01:23:57,418 | INFO     | transexitcode: 0
[2025-11-21 02:24:33] 2025-11-21 01:23:57,418 | INFO     | exeerrorcode: 0
[2025-11-21 02:24:33] 2025-11-21 01:23:57,418 | INFO     | exeerrordiag: 
[2025-11-21 02:24:33] 2025-11-21 01:23:57,418 | INFO     | exitcode: 0
[2025-11-21 02:24:33] 2025-11-21 01:23:57,418 | INFO     | exitmsg: OK
[2025-11-21 02:24:33] 2025-11-21 01:23:57,418 | INFO     | cpuconsumptiontime: 340621 s
[2025-11-21 02:24:33] 2025-11-21 01:23:57,419 | INFO     | nevents: 1000
[2025-11-21 02:24:33] 2025-11-21 01:23:57,419 | INFO     | neventsw: 0
[2025-11-21 02:24:33] 2025-11-21 01:23:57,419 | INFO     | pid: 19341
[2025-11-21 02:24:33] 2025-11-21 01:23:57,419 | INFO     | pgrp: 19341
[2025-11-21 02:24:33] 2025-11-21 01:23:57,419 | INFO     | corecount: 8
[2025-11-21 02:24:33] 2025-11-21 01:23:57,419 | INFO     | event service: False
[2025-11-21 02:24:33] 2025-11-21 01:23:57,419 | INFO     | sizes: {0: 2297020, 1: 2297219, 2: 2297219, 9: 2297509, 12: 2297537, 91360: 2361670, 91366: 2372318, 91377: 2372508}
[2025-11-21 02:24:33] 2025-11-21 01:23:57,419 | INFO     | --------------------------------------------------
[2025-11-21 02:24:33] 2025-11-21 01:23:57,419 | INFO     | 
[2025-11-21 02:24:33] 2025-11-21 01:23:57,419 | INFO     | executing command: ls -lF /var/lib/boinc/slots/12
[2025-11-21 02:24:33] 2025-11-21 01:23:57,456 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-21 02:24:33] 2025-11-21 01:23:57,456 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-21 02:24:33] 2025-11-21 01:23:57,456 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-21 02:24:33] 2025-11-21 01:23:57,456 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-21 02:24:33] 2025-11-21 01:23:57,457 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-21 02:24:33] 2025-11-21 01:23:57,457 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-21 02:24:33] 2025-11-21 01:23:57,457 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-21 02:24:33] 2025-11-21 01:23:57,457 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-21 02:24:33] 2025-11-21 01:23:57,457 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-21 02:24:33] 2025-11-21 01:23:57,457 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-21 02:24:33] 2025-11-21 01:23:57,457 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-21 02:24:33] 2025-11-21 01:23:57,457 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-21 02:24:33] 2025-11-21 01:23:57,457 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-21 02:24:33] 2025-11-21 01:23:57,457 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-21 02:24:33] 2025-11-21 01:23:57,458 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-21 02:24:33] 2025-11-21 01:23:57,458 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-21 02:24:33] 2025-11-21 01:23:57,458 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-21 02:24:33] 2025-11-21 01:23:57,458 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-21 02:24:33] 2025-11-21 01:23:57,458 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-21 02:24:33] 2025-11-21 01:23:57,458 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-21 02:24:33] 2025-11-21 01:23:57,458 | INFO     | job 6891555405 has completed (purged errors)
[2025-11-21 02:24:33] 2025-11-21 01:23:57,459 | INFO     | overall cleanup function is called
[2025-11-21 02:24:33] 2025-11-21 01:23:58,476 | INFO     | --- collectZombieJob: --- 10, [19341]
[2025-11-21 02:24:33] 2025-11-21 01:23:58,477 | INFO     | zombie collector waiting for pid 19341
[2025-11-21 02:24:33] 2025-11-21 01:23:58,477 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-21 02:24:33] 2025-11-21 01:23:58,477 | INFO     | collected zombie processes
[2025-11-21 02:24:33] 2025-11-21 01:23:58,477 | INFO     | will attempt to kill all subprocesses of pid=19341
[2025-11-21 02:24:33] 2025-11-21 01:23:58,580 | INFO     | process IDs to be killed: [19341] (in reverse order)
[2025-11-21 02:24:33] 2025-11-21 01:23:58,675 | WARNING  | found no corresponding commands to process id(s)
[2025-11-21 02:24:33] 2025-11-21 01:23:58,676 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-21 02:24:33] 2025-11-21 01:23:58,680 | INFO     | did not find any defunct processes belonging to 19341
[2025-11-21 02:24:33] 2025-11-21 01:23:58,684 | INFO     | did not find any defunct processes belonging to 19341
[2025-11-21 02:24:33] 2025-11-21 01:23:58,687 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-21 02:24:33] 2025-11-21 01:23:58,687 | INFO     | ready for new job
[2025-11-21 02:24:33] 2025-11-21 01:23:58,687 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-21 02:24:33] 2025-11-21 01:23:58,696 | INFO     | ***************************************
[2025-11-21 02:24:33] 2025-11-21 01:23:58,697 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-21 02:24:33] 2025-11-21 01:23:58,697 | INFO     | ***************************************
[2025-11-21 02:24:33] 2025-11-21 01:23:58,697 | INFO     | 
[2025-11-21 02:24:33] 2025-11-21 01:23:58,698 | INFO     | pilot is running in a VM
[2025-11-21 02:24:33] 2025-11-21 01:23:58,698 | INFO     | architecture information:
[2025-11-21 02:24:33] 2025-11-21 01:23:58,701 | INFO     | executing command: cat /etc/os-release
[2025-11-21 02:24:33] 2025-11-21 01:23:58,737 | INFO     | cat /etc/os-release:
[2025-11-21 02:24:33] NAME="CentOS Linux"
[2025-11-21 02:24:33] VERSION="7 (Core)"
[2025-11-21 02:24:33] ID="centos"
[2025-11-21 02:24:33] ID_LIKE="rhel fedora"
[2025-11-21 02:24:33] VERSION_ID="7"
[2025-11-21 02:24:33] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-21 02:24:33] ANSI_COLOR="0;31"
[2025-11-21 02:24:33] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-21 02:24:33] HOME_URL="https://www.centos.org/"
[2025-11-21 02:24:33] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-21 02:24:33] 
[2025-11-21 02:24:33] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-21 02:24:33] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-21 02:24:33] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-21 02:24:33] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-21 02:24:33] 
[2025-11-21 02:24:33] 2025-11-21 01:23:58,737 | INFO     | ***************************************
[2025-11-21 02:24:33] 2025-11-21 01:23:59,240 | INFO     | executing command: df -mP /var/lib/boinc/slots/12
[2025-11-21 02:24:33] 2025-11-21 01:23:59,267 | INFO     | sufficient remaining disk space (495053701120 B)
[2025-11-21 02:24:33] 2025-11-21 01:23:59,268 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-21 02:24:33] 2025-11-21 01:23:59,268 | INFO     | current server update state: UPDATING_FINAL
[2025-11-21 02:24:33] 2025-11-21 01:23:59,268 | INFO     | update_server=False
[2025-11-21 02:24:33] 2025-11-21 01:23:59,268 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-21 02:24:33] 2025-11-21 01:23:59,269 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-21 02:24:33] 2025-11-21 01:23:59,269 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-21 02:24:33] 2025-11-21 01:23:59,270 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-21 02:24:33] 2025-11-21 01:23:59,270 | INFO     | aborting loop
[2025-11-21 02:24:33] 2025-11-21 01:23:59,324 | INFO     | all data control threads have been joined
[2025-11-21 02:24:33] 2025-11-21 01:23:59,378 | INFO     | all payload control threads have been joined
[2025-11-21 02:24:33] 2025-11-21 01:23:59,734 | INFO     | all job control threads have been joined
[2025-11-21 02:24:33] 2025-11-21 01:24:00,274 | INFO     | [job] queue monitor thread has finished
[2025-11-21 02:24:33] 2025-11-21 01:24:00,275 | INFO     | [job] retrieve thread has finished
[2025-11-21 02:24:33] 2025-11-21 01:24:00,276 | INFO     | [job] job monitor thread has finished
[2025-11-21 02:24:33] 2025-11-21 01:24:00,330 | INFO     | [data] control thread has finished
[2025-11-21 02:24:33] 2025-11-21 01:24:00,384 | INFO     | [payload] control thread has finished
[2025-11-21 02:24:33] 2025-11-21 01:24:00,509 | INFO     | [data] copytool_in thread has finished
[2025-11-21 02:24:33] 2025-11-21 01:24:00,672 | INFO     | [job] validate thread has finished
[2025-11-21 02:24:33] 2025-11-21 01:24:00,739 | INFO     | [job] control thread has finished
[2025-11-21 02:24:33] 2025-11-21 01:24:00,841 | INFO     | [job] create_data_payload thread has finished
[2025-11-21 02:24:33] 2025-11-21 01:24:00,921 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-21 02:24:33] 2025-11-21 01:24:00,925 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-21 02:24:33] 2025-11-21 01:24:01,275 | INFO     | [data] copytool_out thread has finished
[2025-11-21 02:24:33] 2025-11-21 01:24:01,331 | INFO     | [payload] failed_post thread has finished
[2025-11-21 02:24:33] 2025-11-21 01:24:01,491 | INFO     | [payload] validate_pre thread has finished
[2025-11-21 02:24:33] 2025-11-21 01:24:01,661 | INFO     | [payload] validate_post thread has finished
[2025-11-21 02:24:33] 2025-11-21 01:24:01,716 | INFO     | [payload] execute_payloads thread has finished
[2025-11-21 02:24:33] 2025-11-21 01:24:04,929 | INFO     | [data] queue_monitor thread has finished
[2025-11-21 02:24:33] 2025-11-21 01:24:19,471 | INFO     | [monitor] cgroup control has ended
[2025-11-21 02:24:33] 2025-11-21 01:24:19,499 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140568666691392)>', '<ExcThread(monitor, started 140568063616768)>']
[2025-11-21 02:24:33] 2025-11-21 01:24:24,524 | INFO     | all workflow threads have been joined
[2025-11-21 02:24:33] 2025-11-21 01:24:24,525 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-21 02:24:33] 2025-11-21 01:24:24,525 | INFO     | traces error code: 0
[2025-11-21 02:24:33] 2025-11-21 01:24:24,525 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-21 02:24:33] 2025-11-21 01:24:29,733 | INFO     | PID=12838 has CPU usage=2.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-21 02:24:33] 2025-11-21 01:24:29,734 | INFO     | .. there are 9 such processes running
[2025-11-21 02:24:33] 2025-11-21 01:24:29,735 | INFO     | found 0 job(s) in 20 queues
[2025-11-21 02:24:33] 2025-11-21 01:24:29,736 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-21 02:24:33] 2025-11-21 01:24:29,736 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-21 02:24:33] 2025-11-21 01:24:29,736 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-21 02:24:33] 2025-11-21 01:24:29,736 | CRITICAL | thread 'MainThread' is not alive
[2025-11-21 02:24:33] 2025-11-21 01:24:29,736 | INFO     | [monitor] control thread has ended
[2025-11-21 02:24:33] 2025-11-21 01:24:30,007 [wrapper] ==== pilot stdout END ====
[2025-11-21 02:24:33] 2025-11-21 01:24:30,100 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-21 02:24:33] 2025-11-21 01:24:30,182 [wrapper] pilotpid: 12838
[2025-11-21 02:24:33] 2025-11-21 01:24:30,253 [wrapper] Pilot exit status: 0
[2025-11-21 02:24:33] 2025-11-21 01:24:30,510 [wrapper] pandaids: 6891555405
[2025-11-21 02:24:33] 2025-11-21 01:24:31,310 [wrapper] cleanup supervisor_pilot 15754 12839
[2025-11-21 02:24:33] 2025-11-21 01:24:31,415 [wrapper] Test setup, not cleaning
[2025-11-21 02:24:33] 2025-11-21 01:24:31,493 [wrapper] apfmon messages muted
[2025-11-21 02:24:33] 2025-11-21 01:24:31,557 [wrapper] ==== wrapper stdout END ====
[2025-11-21 02:24:33] 2025-11-21 01:24:31,663 [wrapper] ==== wrapper stderr END ====
[2025-11-21 02:24:33]  *** Error codes and diagnostics ***
[2025-11-21 02:24:33]     "exeErrorCode": 0,
[2025-11-21 02:24:33]     "exeErrorDiag": "",
[2025-11-21 02:24:33]     "pilotErrorCode": 0,
[2025-11-21 02:24:33]     "pilotErrorDiag": "",
[2025-11-21 02:24:33]  *** Listing of results directory ***
[2025-11-21 02:24:33] total 1330508
[2025-11-21 02:24:33] -rw-r--r--. 1 boinc boinc    576529 Nov 18 16:15 pilot3.tar.gz
[2025-11-21 02:24:33] -rw-r--r--. 1 boinc boinc      5112 Nov 18 16:15 queuedata.json
[2025-11-21 02:24:33] -rwx------. 1 boinc boinc     36292 Nov 18 16:17 runpilot2-wrapper.sh
[2025-11-21 02:24:33] -rw-r--r--. 1 boinc boinc       100 Nov 20 00:58 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-21 02:24:33] -rwxr-xr-x. 1 boinc boinc      7986 Nov 20 00:58 run_atlas
[2025-11-21 02:24:33] -rw-r--r--. 1 boinc boinc       105 Nov 20 00:58 job.xml
[2025-11-21 02:24:33] -rw-r--r--. 1 boinc boinc      6391 Nov 20 00:58 init_data.xml
[2025-11-21 02:24:33] -rw-r--r--. 2 boinc boinc 410543566 Nov 20 00:58 EVNT.47493065._000023.pool.root.1
[2025-11-21 02:24:33] -rw-r--r--. 2 boinc boinc     15120 Nov 20 00:58 start_atlas.sh
[2025-11-21 02:24:33] drwxrwx--x. 2 boinc boinc        68 Nov 20 00:58 shared
[2025-11-21 02:24:33] -rw-r--r--. 2 boinc boinc    590101 Nov 20 00:58 input.tar.gz
[2025-11-21 02:24:33] -rw-r--r--. 1 boinc boinc         0 Nov 20 00:58 boinc_lockfile
[2025-11-21 02:24:33] -rw-r--r--. 1 boinc boinc      2768 Nov 20 00:58 pandaJob.out
[2025-11-21 02:24:33] -rw-------. 1 boinc boinc    989435 Nov 20 01:00 agis_schedconf.cvmfs.json
[2025-11-21 02:24:33] drwx------. 5 boinc boinc      4096 Nov 20 01:00 pilot3
[2025-11-21 02:24:33] -rw-r--r--. 1 boinc boinc       533 Nov 21 02:08 boinc_task_state.xml
[2025-11-21 02:24:33] -rw-------. 1 boinc boinc 918577483 Nov 21 02:22 HITS.47493068._000221.pool.root.1
[2025-11-21 02:24:33] -rw-------. 1 boinc boinc      1035 Nov 21 02:23 memory_monitor_summary.json
[2025-11-21 02:24:33] -rw-------. 1 boinc boinc   1526164 Nov 21 02:23 agis_ddmendpoints.agis.ALL.json
[2025-11-21 02:24:33] -rw-------. 1 boinc boinc   2555143 Nov 21 02:23 log.47493068._000221.job.log.tgz.1
[2025-11-21 02:24:33] -rw-------. 1 boinc boinc      8623 Nov 21 02:23 heartbeat.json
[2025-11-21 02:24:33] -rw-r--r--. 1 boinc boinc      8192 Nov 21 02:24 boinc_mmap_file
[2025-11-21 02:24:33] -rw-r--r--. 1 boinc boinc        29 Nov 21 02:24 wrapper_checkpoint.txt
[2025-11-21 02:24:33] -rw-------. 1 boinc boinc        95 Nov 21 02:24 pilot_heartbeat.json
[2025-11-21 02:24:33] -rw-------. 1 boinc boinc       890 Nov 21 02:24 pilotlog.txt
[2025-11-21 02:24:33] -rw-------. 1 boinc boinc  12149534 Nov 21 02:24 log.47493068._000221.job.log.1
[2025-11-21 02:24:33] -rw-------. 1 boinc boinc       353 Nov 21 02:24 output.list
[2025-11-21 02:24:33] -rw-r--r--. 1 boinc boinc       620 Nov 21 02:24 runtime_log
[2025-11-21 02:24:33] -rw-------. 1 boinc boinc  14725120 Nov 21 02:24 result.tar.gz
[2025-11-21 02:24:33] -rw-r--r--. 1 boinc boinc      8717 Nov 21 02:24 runtime_log.err
[2025-11-21 02:24:33] -rw-------. 1 boinc boinc       662 Nov 21 02:24 q6CNDmQdcf8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmMBFKDmDxT9rm.diag
[2025-11-21 02:24:33] -rw-r--r--. 1 boinc boinc     20912 Nov 21 02:24 stderr.txt
[2025-11-21 02:24:33] HITS file was successfully produced:
[2025-11-21 02:24:33] -rw-------. 1 boinc boinc 918577483 Nov 21 02:22 shared/HITS.pool.root.1
[2025-11-21 02:24:33]  *** Contents of shared directory: ***
[2025-11-21 02:24:33] total 1312952
[2025-11-21 02:24:33] -rw-r--r--. 2 boinc boinc 410543566 Nov 20 00:58 ATLAS.root_0
[2025-11-21 02:24:33] -rw-r--r--. 2 boinc boinc     15120 Nov 20 00:58 start_atlas.sh
[2025-11-21 02:24:33] -rw-r--r--. 2 boinc boinc    590101 Nov 20 00:58 input.tar.gz
[2025-11-21 02:24:33] -rw-------. 1 boinc boinc 918577483 Nov 21 02:22 HITS.pool.root.1
[2025-11-21 02:24:33] -rw-------. 1 boinc boinc  14725120 Nov 21 02:24 result.tar.gz
02:24:34 (9027): run_atlas exited; CPU time 341117.427406
02:24:34 (9027): called boinc_finish(0)

</stderr_txt>
]]>

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