Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
11:21:10 (15256): wrapper (7.7.26015): starting
11:21:10 (15256): wrapper: running run_atlas (--nthreads 8)
[2025-11-20 11:21:10] Arguments: --nthreads 8
[2025-11-20 11:21:10] Threads: 8
[2025-11-20 11:21:10] Checking for CVMFS
[2025-11-20 11:21:10] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-20 11:21:10] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-20 11:21:10] Running cvmfs_config stat atlas.cern.ch
[2025-11-20 11:21:11] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-20 11:21:11] 2.11.2.0 6805 276437 143172 153076 2 230 21759012 25165825 4573 130560 30 118199071 99.858 76987957 3142 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-11-20 11:21:11] CVMFS is ok
[2025-11-20 11:21:11] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-20 11:21:11] Checking for apptainer binary...
[2025-11-20 11:21:11] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-20 11:21:11] Running /usr/bin/apptainer --version
[2025-11-20 11:21:11] apptainer version 1.3.2-1.el7
[2025-11-20 11:21:11] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-20 11:21:13] cg-vwn251.simple-grid.lan
[2025-11-20 11:21:13] apptainer works
[2025-11-20 11:21:13] Set ATHENA_PROC_NUMBER=8
[2025-11-20 11:21:13] Set ATHENA_CORE_NUMBER=8
[2025-11-20 11:21:13] Starting ATLAS job with PandaID=6891106317
[2025-11-20 11:21:13] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-21 13:08:42]  *** The last 200 lines of the pilot log: ***
[2025-11-21 13:08:42] 2025-11-21 12:07:49,679 | INFO     | time since job start (92579s) is within the limit (172800.0s)
[2025-11-21 13:08:42] 2025-11-21 12:07:50,303 | INFO     | monitor loop #6223: job 0:6891106317 is in state 'finished'
[2025-11-21 13:08:42] 2025-11-21 12:07:50,304 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-21 13:08:42] 2025-11-21 12:07:51,686 | INFO     | time since job start (92581s) is within the limit (172800.0s)
[2025-11-21 13:08:42] 2025-11-21 12:07:52,809 | INFO     | monitor loop #6224: job 0:6891106317 is in state 'finished'
[2025-11-21 13:08:42] 2025-11-21 12:07:52,810 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-21 13:08:42] 2025-11-21 12:07:53,697 | INFO     | time since job start (92583s) is within the limit (172800.0s)
[2025-11-21 13:08:42] 2025-11-21 12:07:54,914 | INFO     | PID=19067 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-21 13:08:42] 2025-11-21 12:07:54,914 | INFO     | .. there are 9 such processes running
[2025-11-21 13:08:42] 2025-11-21 12:07:55,313 | INFO     | monitor loop #6225: job 0:6891106317 is in state 'finished'
[2025-11-21 13:08:42] 2025-11-21 12:07:55,314 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-21 13:08:42] 2025-11-21 12:07:55,916 | INFO     | time since job start (92585s) is within the limit (172800.0s)
[2025-11-21 13:08:42] 2025-11-21 12:07:57,824 | INFO     | monitor loop #6226: job 0:6891106317 is in state 'finished'
[2025-11-21 13:08:42] 2025-11-21 12:07:57,825 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-21 13:08:42] 2025-11-21 12:07:57,923 | INFO     | time since job start (92587s) is within the limit (172800.0s)
[2025-11-21 13:08:42] 2025-11-21 12:07:59,342 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-21 13:08:42] 2025-11-21 12:07:59,343 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2025-11-21 13:08:42] 2025-11-21 12:07:59,345 | INFO     | using path: /var/lib/boinc/slots/6/PanDA_Pilot-6891106317/memory_monitor_summary.json (trf name=prmon)
[2025-11-21 13:08:42] 2025-11-21 12:07:59,346 | INFO     | extracted standard info from prmon json
[2025-11-21 13:08:42] 2025-11-21 12:07:59,346 | INFO     | extracted standard memory fields from prmon json
[2025-11-21 13:08:42] 2025-11-21 12:07:59,346 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-21 13:08:42] 2025-11-21 12:07:59,391 | INFO     | fitting pss+swap vs Time
[2025-11-21 13:08:42] 2025-11-21 12:07:59,393 | INFO     | sum of square deviations: 1063365774077.1971
[2025-11-21 13:08:42] 2025-11-21 12:07:59,495 | INFO     | sum of deviations: 4431161509493.908
[2025-11-21 13:08:42] 2025-11-21 12:07:59,496 | INFO     | mean x: 1763680747.744032
[2025-11-21 13:08:42] 2025-11-21 12:07:59,496 | INFO     | mean y: 2829443.1551724137
[2025-11-21 13:08:42] 2025-11-21 12:07:59,496 | INFO     | intersect: -7346621173.892271
[2025-11-21 13:08:42] 2025-11-21 12:07:59,498 | INFO     | chi2: 29.62008066883173
[2025-11-21 13:08:42] 2025-11-21 12:07:59,505 | INFO     | sum of square deviations: 1052824139284.4331
[2025-11-21 13:08:42] 2025-11-21 12:07:59,590 | INFO     | sum of deviations: 4918460054180.279
[2025-11-21 13:08:42] 2025-11-21 12:07:59,590 | INFO     | mean x: 1763680595.2481704
[2025-11-21 13:08:42] 2025-11-21 12:07:59,590 | INFO     | mean y: 2836491.465735196
[2025-11-21 13:08:42] 2025-11-21 12:07:59,591 | INFO     | intersect: -8236519192.339951
[2025-11-21 13:08:42] 2025-11-21 12:07:59,599 | INFO     | chi2: 26.543052285274314
[2025-11-21 13:08:42] 2025-11-21 12:07:59,600 | INFO     | current chi2=26.543052285274314 (change=10.38831871513191 %)
[2025-11-21 13:08:42] 2025-11-21 12:07:59,600 | INFO     | right removable region: 1502
[2025-11-21 13:08:42] 2025-11-21 12:07:59,602 | INFO     | sum of square deviations: 1052822994924.4331
[2025-11-21 13:08:42] 2025-11-21 12:07:59,703 | INFO     | sum of deviations: 3782557110142.5303
[2025-11-21 13:08:42] 2025-11-21 12:07:59,703 | INFO     | mean x: 1763680900.2481704
[2025-11-21 13:08:42] 2025-11-21 12:07:59,704 | INFO     | mean y: 2838825.376580173
[2025-11-21 13:08:42] 2025-11-21 12:07:59,704 | INFO     | intersect: -6333671453.575986
[2025-11-21 13:08:42] 2025-11-21 12:07:59,706 | INFO     | chi2: 24.502588196649214
[2025-11-21 13:08:42] 2025-11-21 12:07:59,706 | INFO     | current chi2=24.502588196649214 (change=17.27710511459711 %)
[2025-11-21 13:08:42] 2025-11-21 12:07:59,706 | INFO     | left removable region: 10
[2025-11-21 13:08:42] 2025-11-21 12:07:59,708 | INFO     | sum of square deviations: 1029876003744.1691
[2025-11-21 13:08:42] 2025-11-21 12:07:59,778 | INFO     | sum of deviations: 3785957012186.6147
[2025-11-21 13:08:42] 2025-11-21 12:07:59,778 | INFO     | mean x: 1763680869.7573726
[2025-11-21 13:08:42] 2025-11-21 12:07:59,778 | INFO     | mean y: 2856205.5127345845
[2025-11-21 13:08:42] 2025-11-21 12:07:59,778 | INFO     | intersect: -6480662132.463802
[2025-11-21 13:08:42] 2025-11-21 12:07:59,780 | INFO     | chi2: 16.47566775616782
[2025-11-21 13:08:42] 2025-11-21 12:07:59,780 | INFO     | current memory leak: 3.68 B/s (using 1492 data points, chi2=16.48)
[2025-11-21 13:08:42] 2025-11-21 12:07:59,783 | INFO     | could have reported an average CPU frequency of 1999 MHz (51 samples)
[2025-11-21 13:08:42] 2025-11-21 12:07:59,783 | INFO     | ..............................
[2025-11-21 13:08:42] 2025-11-21 12:07:59,783 | INFO     | . Timing measurements:
[2025-11-21 13:08:42] 2025-11-21 12:07:59,783 | INFO     | . get job = 0 s
[2025-11-21 13:08:42] 2025-11-21 12:07:59,783 | INFO     | . initial setup = 12 s
[2025-11-21 13:08:42] 2025-11-21 12:07:59,783 | INFO     | . payload setup = 138 s
[2025-11-21 13:08:42] 2025-11-21 12:07:59,783 | INFO     | . stage-in = 1 s
[2025-11-21 13:08:42] 2025-11-21 12:07:59,783 | INFO     | . payload execution = 92133 s
[2025-11-21 13:08:42] 2025-11-21 12:07:59,784 | INFO     | . stage-out = 6 s
[2025-11-21 13:08:42] 2025-11-21 12:07:59,784 | INFO     | . log creation = 2 s
[2025-11-21 13:08:42] 2025-11-21 12:07:59,784 | INFO     | ..............................
[2025-11-21 13:08:42] 2025-11-21 12:07:59,938 | INFO     | time since job start (92589s) is within the limit (172800.0s)
[2025-11-21 13:08:42] 2025-11-21 12:07:59,966 | INFO     | 
[2025-11-21 13:08:42] 2025-11-21 12:07:59,966 | INFO     | job summary report
[2025-11-21 13:08:42] 2025-11-21 12:07:59,966 | INFO     | --------------------------------------------------
[2025-11-21 13:08:42] 2025-11-21 12:07:59,966 | INFO     | PanDA job id: 6891106317
[2025-11-21 13:08:42] 2025-11-21 12:07:59,966 | INFO     | task id: 47483661
[2025-11-21 13:08:42] 2025-11-21 12:07:59,966 | INFO     | errors: (none)
[2025-11-21 13:08:42] 2025-11-21 12:07:59,966 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-21 13:08:42] 2025-11-21 12:07:59,966 | INFO     | pilot state: finished 
[2025-11-21 13:08:42] 2025-11-21 12:07:59,967 | INFO     | transexitcode: 0
[2025-11-21 13:08:42] 2025-11-21 12:07:59,967 | INFO     | exeerrorcode: 0
[2025-11-21 13:08:42] 2025-11-21 12:07:59,967 | INFO     | exeerrordiag: 
[2025-11-21 13:08:42] 2025-11-21 12:07:59,967 | INFO     | exitcode: 0
[2025-11-21 13:08:42] 2025-11-21 12:07:59,967 | INFO     | exitmsg: OK
[2025-11-21 13:08:42] 2025-11-21 12:07:59,967 | INFO     | cpuconsumptiontime: 336015 s
[2025-11-21 13:08:42] 2025-11-21 12:07:59,967 | INFO     | nevents: 1000
[2025-11-21 13:08:42] 2025-11-21 12:07:59,967 | INFO     | neventsw: 0
[2025-11-21 13:08:42] 2025-11-21 12:07:59,967 | INFO     | pid: 25661
[2025-11-21 13:08:42] 2025-11-21 12:07:59,967 | INFO     | pgrp: 25661
[2025-11-21 13:08:42] 2025-11-21 12:07:59,967 | INFO     | corecount: 8
[2025-11-21 13:08:42] 2025-11-21 12:07:59,967 | INFO     | event service: False
[2025-11-21 13:08:42] 2025-11-21 12:07:59,968 | INFO     | sizes: {0: 2296366, 1: 2297051, 2: 2297250, 13: 2297250, 23: 2297306, 34: 2297334, 45: 2297490, 56: 2297518, 67: 2297546, 77: 2297574, 88: 2297630, 99: 2297938, 10
[2025-11-21 13:08:42] 2025-11-21 12:07:59,968 | INFO     | --------------------------------------------------
[2025-11-21 13:08:42] 2025-11-21 12:07:59,968 | INFO     | 
[2025-11-21 13:08:42] 2025-11-21 12:07:59,968 | INFO     | executing command: ls -lF /var/lib/boinc/slots/6
[2025-11-21 13:08:42] 2025-11-21 12:08:00,440 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-21 13:08:42] 2025-11-21 12:08:00,440 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-21 13:08:42] 2025-11-21 12:08:00,440 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-21 13:08:42] 2025-11-21 12:08:00,441 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-21 13:08:42] 2025-11-21 12:08:00,441 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-21 13:08:42] 2025-11-21 12:08:00,441 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-21 13:08:42] 2025-11-21 12:08:00,441 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-21 13:08:42] 2025-11-21 12:08:00,441 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-21 13:08:42] 2025-11-21 12:08:00,441 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-21 13:08:42] 2025-11-21 12:08:00,441 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-21 13:08:42] 2025-11-21 12:08:00,441 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-21 13:08:42] 2025-11-21 12:08:00,441 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-21 13:08:42] 2025-11-21 12:08:00,441 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-21 13:08:42] 2025-11-21 12:08:00,441 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-21 13:08:42] 2025-11-21 12:08:00,442 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-21 13:08:42] 2025-11-21 12:08:00,442 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-21 13:08:42] 2025-11-21 12:08:00,442 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-21 13:08:42] 2025-11-21 12:08:00,442 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-21 13:08:42] 2025-11-21 12:08:00,442 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-21 13:08:42] 2025-11-21 12:08:00,442 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-21 13:08:42] 2025-11-21 12:08:00,442 | INFO     | job 6891106317 has completed (purged errors)
[2025-11-21 13:08:42] 2025-11-21 12:08:00,443 | INFO     | overall cleanup function is called
[2025-11-21 13:08:42] 2025-11-21 12:08:01,463 | INFO     | --- collectZombieJob: --- 10, [25661]
[2025-11-21 13:08:42] 2025-11-21 12:08:01,464 | INFO     | zombie collector waiting for pid 25661
[2025-11-21 13:08:42] 2025-11-21 12:08:01,464 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-21 13:08:42] 2025-11-21 12:08:01,464 | INFO     | collected zombie processes
[2025-11-21 13:08:42] 2025-11-21 12:08:01,464 | INFO     | will attempt to kill all subprocesses of pid=25661
[2025-11-21 13:08:42] 2025-11-21 12:08:01,599 | INFO     | process IDs to be killed: [25661] (in reverse order)
[2025-11-21 13:08:42] 2025-11-21 12:08:02,450 | WARNING  | found no corresponding commands to process id(s)
[2025-11-21 13:08:42] 2025-11-21 12:08:02,450 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-21 13:08:42] 2025-11-21 12:08:02,454 | INFO     | did not find any defunct processes belonging to 25661
[2025-11-21 13:08:42] 2025-11-21 12:08:02,461 | INFO     | did not find any defunct processes belonging to 25661
[2025-11-21 13:08:42] 2025-11-21 12:08:02,523 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-21 13:08:42] 2025-11-21 12:08:02,523 | INFO     | ready for new job
[2025-11-21 13:08:42] 2025-11-21 12:08:02,523 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-21 13:08:42] 2025-11-21 12:08:02,530 | INFO     | ***************************************
[2025-11-21 13:08:42] 2025-11-21 12:08:02,530 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-21 13:08:42] 2025-11-21 12:08:02,531 | INFO     | ***************************************
[2025-11-21 13:08:42] 2025-11-21 12:08:02,531 | INFO     | 
[2025-11-21 13:08:42] 2025-11-21 12:08:02,531 | INFO     | pilot is running in a VM
[2025-11-21 13:08:42] 2025-11-21 12:08:02,531 | INFO     | architecture information:
[2025-11-21 13:08:42] 2025-11-21 12:08:02,538 | INFO     | executing command: cat /etc/os-release
[2025-11-21 13:08:42] 2025-11-21 12:08:02,817 | INFO     | cat /etc/os-release:
[2025-11-21 13:08:42] NAME="CentOS Linux"
[2025-11-21 13:08:42] VERSION="7 (Core)"
[2025-11-21 13:08:42] ID="centos"
[2025-11-21 13:08:42] ID_LIKE="rhel fedora"
[2025-11-21 13:08:42] VERSION_ID="7"
[2025-11-21 13:08:42] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-21 13:08:42] ANSI_COLOR="0;31"
[2025-11-21 13:08:42] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-21 13:08:42] HOME_URL="https://www.centos.org/"
[2025-11-21 13:08:42] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-21 13:08:42] 
[2025-11-21 13:08:42] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-21 13:08:42] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-21 13:08:42] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-21 13:08:42] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-21 13:08:42] 
[2025-11-21 13:08:42] 2025-11-21 12:08:02,817 | INFO     | ***************************************
[2025-11-21 13:08:42] 2025-11-21 12:08:03,320 | INFO     | executing command: df -mP /var/lib/boinc/slots/6
[2025-11-21 13:08:42] 2025-11-21 12:08:03,503 | INFO     | sufficient remaining disk space (495175335936 B)
[2025-11-21 13:08:42] 2025-11-21 12:08:03,503 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-21 13:08:42] 2025-11-21 12:08:03,504 | INFO     | current server update state: UPDATING_FINAL
[2025-11-21 13:08:42] 2025-11-21 12:08:03,504 | INFO     | update_server=False
[2025-11-21 13:08:42] 2025-11-21 12:08:03,504 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-21 13:08:42] 2025-11-21 12:08:03,504 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-21 13:08:42] 2025-11-21 12:08:03,504 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-21 13:08:42] 2025-11-21 12:08:03,529 | INFO     | all payload control threads have been joined
[2025-11-21 13:08:42] 2025-11-21 12:08:03,841 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-21 13:08:42] 2025-11-21 12:08:03,842 | INFO     | aborting loop
[2025-11-21 13:08:42] 2025-11-21 12:08:03,935 | INFO     | all data control threads have been joined
[2025-11-21 13:08:42] 2025-11-21 12:08:04,510 | INFO     | [job] retrieve thread has finished
[2025-11-21 13:08:42] 2025-11-21 12:08:04,536 | INFO     | [payload] control thread has finished
[2025-11-21 13:08:42] 2025-11-21 12:08:04,605 | INFO     | all job control threads have been joined
[2025-11-21 13:08:42] 2025-11-21 12:08:04,746 | INFO     | [payload] execute_payloads thread has finished
[2025-11-21 13:08:42] 2025-11-21 12:08:04,810 | INFO     | [payload] validate_post thread has finished
[2025-11-21 13:08:42] 2025-11-21 12:08:04,848 | INFO     | [job] job monitor thread has finished
[2025-11-21 13:08:42] 2025-11-21 12:08:04,897 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-21 13:08:42] 2025-11-21 12:08:04,942 | INFO     | [data] control thread has finished
[2025-11-21 13:08:42] 2025-11-21 12:08:04,979 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-21 13:08:42] 2025-11-21 12:08:05,017 | INFO     | [data] copytool_in thread has finished
[2025-11-21 13:08:42] 2025-11-21 12:08:05,204 | INFO     | [payload] validate_pre thread has finished
[2025-11-21 13:08:42] 2025-11-21 12:08:05,488 | INFO     | [payload] failed_post thread has finished
[2025-11-21 13:08:42] 2025-11-21 12:08:05,510 | INFO     | [data] copytool_out thread has finished
[2025-11-21 13:08:42] 2025-11-21 12:08:05,611 | INFO     | [job] control thread has finished
[2025-11-21 13:08:42] 2025-11-21 12:08:05,812 | INFO     | [job] validate thread has finished
[2025-11-21 13:08:42] 2025-11-21 12:08:05,813 | INFO     | [job] create_data_payload thread has finished
[2025-11-21 13:08:42] 2025-11-21 12:08:05,985 | INFO     | [job] queue monitor thread has finished
[2025-11-21 13:08:42] 2025-11-21 12:08:07,515 | INFO     | [data] queue_monitor thread has finished
[2025-11-21 13:08:42] 2025-11-21 12:08:31,702 | INFO     | [monitor] cgroup control has ended
[2025-11-21 13:08:42] 2025-11-21 12:08:32,051 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140283716761408)>', '<ExcThread(monitor, started 140283144558336)>']
[2025-11-21 13:08:42] 2025-11-21 12:08:33,107 | INFO     | PID=19067 has CPU usage=2.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-21 13:08:42] 2025-11-21 12:08:33,108 | INFO     | .. there are 9 such processes running
[2025-11-21 13:08:42] 2025-11-21 12:08:33,108 | INFO     | found 0 job(s) in 20 queues
[2025-11-21 13:08:42] 2025-11-21 12:08:33,108 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-21 13:08:42] 2025-11-21 12:08:33,108 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-21 13:08:42] 2025-11-21 12:08:33,108 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-21 13:08:42] 2025-11-21 12:08:33,108 | INFO     | [monitor] control thread has ended
[2025-11-21 13:08:42] 2025-11-21 12:08:37,076 | INFO     | all workflow threads have been joined
[2025-11-21 13:08:42] 2025-11-21 12:08:37,077 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-21 13:08:42] 2025-11-21 12:08:37,077 | INFO     | traces error code: 0
[2025-11-21 13:08:42] 2025-11-21 12:08:37,077 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-21 13:08:42] 2025-11-21 12:08:37,438 [wrapper] ==== pilot stdout END ====
[2025-11-21 13:08:42] 2025-11-21 12:08:37,527 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-21 13:08:42] 2025-11-21 12:08:37,632 [wrapper] pilotpid: 19067
[2025-11-21 13:08:42] 2025-11-21 12:08:37,727 [wrapper] Pilot exit status: 0
[2025-11-21 13:08:42] 2025-11-21 12:08:38,119 [wrapper] pandaids: 6891106317
[2025-11-21 13:08:42] 2025-11-21 12:08:38,693 [wrapper] cleanup supervisor_pilot 21406 19068
[2025-11-21 13:08:42] 2025-11-21 12:08:38,787 [wrapper] Test setup, not cleaning
[2025-11-21 13:08:42] 2025-11-21 12:08:38,905 [wrapper] apfmon messages muted
[2025-11-21 13:08:42] 2025-11-21 12:08:39,040 [wrapper] ==== wrapper stdout END ====
[2025-11-21 13:08:42] 2025-11-21 12:08:39,144 [wrapper] ==== wrapper stderr END ====
[2025-11-21 13:08:42]  *** Error codes and diagnostics ***
[2025-11-21 13:08:42]     "exeErrorCode": 0,
[2025-11-21 13:08:42]     "exeErrorDiag": "",
[2025-11-21 13:08:42]     "pilotErrorCode": 0,
[2025-11-21 13:08:42]     "pilotErrorDiag": "",
[2025-11-21 13:08:42]  *** Listing of results directory ***
[2025-11-21 13:08:42] total 1332668
[2025-11-21 13:08:42] -rw-r--r--. 1 boinc boinc    576529 Nov 18 07:54 pilot3.tar.gz
[2025-11-21 13:08:42] -rwx------. 1 boinc boinc     36292 Nov 18 07:57 runpilot2-wrapper.sh
[2025-11-21 13:08:42] -rw-r--r--. 1 boinc boinc      5112 Nov 18 07:57 queuedata.json
[2025-11-21 13:08:42] -rw-r--r--. 1 boinc boinc       100 Nov 20 11:21 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-21 13:08:42] -rwxr-xr-x. 1 boinc boinc      7986 Nov 20 11:21 run_atlas
[2025-11-21 13:08:42] -rw-r--r--. 1 boinc boinc       105 Nov 20 11:21 job.xml
[2025-11-21 13:08:42] -rw-r--r--. 1 boinc boinc      6389 Nov 20 11:21 init_data.xml
[2025-11-21 13:08:42] -rw-r--r--. 2 boinc boinc 410466981 Nov 20 11:21 EVNT.47483658._000258.pool.root.1
[2025-11-21 13:08:42] -rw-r--r--. 2 boinc boinc     15120 Nov 20 11:21 start_atlas.sh
[2025-11-21 13:08:42] drwxrwx--x. 2 boinc boinc        68 Nov 20 11:21 shared
[2025-11-21 13:08:42] -rw-r--r--. 2 boinc boinc    590101 Nov 20 11:21 input.tar.gz
[2025-11-21 13:08:42] -rw-r--r--. 1 boinc boinc         0 Nov 20 11:21 boinc_lockfile
[2025-11-21 13:08:42] -rw-r--r--. 1 boinc boinc      2770 Nov 20 11:21 pandaJob.out
[2025-11-21 13:08:42] -rw-------. 1 boinc boinc    989443 Nov 20 11:24 agis_schedconf.cvmfs.json
[2025-11-21 13:08:42] drwx------. 5 boinc boinc      4096 Nov 20 11:24 pilot3
[2025-11-21 13:08:42] -rw-r--r--. 1 boinc boinc       533 Nov 21 12:42 boinc_task_state.xml
[2025-11-21 13:08:42] -rw-------. 1 boinc boinc 920376271 Nov 21 13:04 HITS.47483661._002271.pool.root.1
[2025-11-21 13:08:42] -rw-------. 1 boinc boinc      1033 Nov 21 13:06 memory_monitor_summary.json
[2025-11-21 13:08:42] -rw-------. 1 boinc boinc   1526164 Nov 21 13:06 agis_ddmendpoints.agis.ALL.json
[2025-11-21 13:08:42] -rw-------. 1 boinc boinc   2579419 Nov 21 13:06 log.47483661._002271.job.log.tgz.1
[2025-11-21 13:08:42] -rw-------. 1 boinc boinc        95 Nov 21 13:07 pilot_heartbeat.json
[2025-11-21 13:08:42] -rw-------. 1 boinc boinc      8623 Nov 21 13:07 heartbeat.json
[2025-11-21 13:08:42] -rw-r--r--. 1 boinc boinc      8192 Nov 21 13:08 boinc_mmap_file
[2025-11-21 13:08:42] -rw-r--r--. 1 boinc boinc        29 Nov 21 13:08 wrapper_checkpoint.txt
[2025-11-21 13:08:42] -rw-------. 1 boinc boinc      4884 Nov 21 13:08 pilotlog.txt
[2025-11-21 13:08:42] -rw-------. 1 boinc boinc  12367504 Nov 21 13:08 log.47483661._002271.job.log.1
[2025-11-21 13:08:42] -rw-------. 1 boinc boinc       353 Nov 21 13:08 output.list
[2025-11-21 13:08:42] -rw-r--r--. 1 boinc boinc       620 Nov 21 13:08 runtime_log
[2025-11-21 13:08:42] -rw-------. 1 boinc boinc  14970880 Nov 21 13:08 result.tar.gz
[2025-11-21 13:08:42] -rw-r--r--. 1 boinc boinc      8703 Nov 21 13:08 runtime_log.err
[2025-11-21 13:08:42] -rw-------. 1 boinc boinc       662 Nov 21 13:08 fPXKDmLpUf8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmANKODmBiQLhm.diag
[2025-11-21 13:08:42] -rw-r--r--. 1 boinc boinc     21508 Nov 21 13:08 stderr.txt
[2025-11-21 13:08:42] HITS file was successfully produced:
[2025-11-21 13:08:42] -rw-------. 1 boinc boinc 920376271 Nov 21 13:04 shared/HITS.pool.root.1
[2025-11-21 13:08:42]  *** Contents of shared directory: ***
[2025-11-21 13:08:42] total 1314872
[2025-11-21 13:08:42] -rw-r--r--. 2 boinc boinc 410466981 Nov 20 11:21 ATLAS.root_0
[2025-11-21 13:08:42] -rw-r--r--. 2 boinc boinc     15120 Nov 20 11:21 start_atlas.sh
[2025-11-21 13:08:42] -rw-r--r--. 2 boinc boinc    590101 Nov 20 11:21 input.tar.gz
[2025-11-21 13:08:42] -rw-------. 1 boinc boinc 920376271 Nov 21 13:04 HITS.pool.root.1
[2025-11-21 13:08:42] -rw-------. 1 boinc boinc  14970880 Nov 21 13:08 result.tar.gz
13:08:43 (15256): run_atlas exited; CPU time 336618.210726
13:08:43 (15256): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN