Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
05:39:52 (1076013): wrapper (7.7.26015): starting
05:39:52 (1076013): wrapper: running run_atlas (--nthreads 4)
[2025-11-15 05:39:52] Arguments: --nthreads 4
[2025-11-15 05:39:52] Threads: 4
[2025-11-15 05:39:52] Checking for CVMFS
[2025-11-15 05:39:52] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-15 05:39:52] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-15 05:39:52] Running cvmfs_config stat atlas.cern.ch
[2025-11-15 05:39:52] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-15 05:39:52] 2.9.2.0 940228 788 68648 152881 1 68 27660132 36864000 0 130560 0 385876 99.965 30815 10785 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-11-15 05:39:52] CVMFS is ok
[2025-11-15 05:39:52] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-15 05:39:52] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-15 05:39:52] Further information can be found at the LHC@home message board.
[2025-11-15 05:39:52] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-15 05:39:52] Checking for apptainer binary...
[2025-11-15 05:39:52] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-15 05:39:52] Running /usr/bin/apptainer --version
[2025-11-15 05:39:52] apptainer version 1.4.1-1.1
[2025-11-15 05:39:52] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-15 05:39:52] cosA131b
[2025-11-15 05:39:52] apptainer works
[2025-11-15 05:39:52] Set ATHENA_PROC_NUMBER=4
[2025-11-15 05:39:52] Set ATHENA_CORE_NUMBER=4
[2025-11-15 05:39:52] Starting ATLAS job with PandaID=6886146372
[2025-11-15 05:39:52] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-15 09:57:26]  *** The last 200 lines of the pilot log: ***
[2025-11-15 09:57:26] 2025-11-15 08:56:28,310 | INFO     | extracted standard info from prmon json
[2025-11-15 09:57:26] 2025-11-15 08:56:28,310 | INFO     | extracted standard memory fields from prmon json
[2025-11-15 09:57:26] 2025-11-15 08:56:28,310 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-15 09:57:26] 2025-11-15 08:56:28,312 | INFO     | fitting pss+swap vs Time
[2025-11-15 09:57:26] 2025-11-15 08:56:28,312 | INFO     | sum of square deviations: 4962187923.0
[2025-11-15 09:57:26] 2025-11-15 08:56:28,313 | INFO     | sum of deviations: 129096773794.00002
[2025-11-15 09:57:26] 2025-11-15 08:56:28,313 | INFO     | mean x: 1763189281.5
[2025-11-15 09:57:26] 2025-11-15 08:56:28,313 | INFO     | mean y: 2721289.793650794
[2025-11-15 09:57:26] 2025-11-15 08:56:28,313 | INFO     | intersect: -45868586158.03009
[2025-11-15 09:57:26] 2025-11-15 08:56:28,313 | INFO     | chi2: 4.430158037179549
[2025-11-15 09:57:26] 2025-11-15 08:56:28,313 | INFO     | sum of square deviations: 4672638308.0
[2025-11-15 09:57:26] 2025-11-15 08:56:28,314 | INFO     | sum of deviations: 162792268614.99997
[2025-11-15 09:57:26] 2025-11-15 08:56:28,314 | INFO     | mean x: 1763189129.0
[2025-11-15 09:57:26] 2025-11-15 08:56:28,314 | INFO     | mean y: 2738844.2510121455
[2025-11-15 09:57:26] 2025-11-15 08:56:28,314 | INFO     | intersect: -61425845905.35119
[2025-11-15 09:57:26] 2025-11-15 08:56:28,314 | INFO     | chi2: 3.2784814881283797
[2025-11-15 09:57:26] 2025-11-15 08:56:28,314 | INFO     | current chi2=3.2784814881283797 (change=25.996285897384862 %)
[2025-11-15 09:57:26] 2025-11-15 08:56:28,314 | INFO     | sum of square deviations: 4394577280.5
[2025-11-15 09:57:26] 2025-11-15 08:56:28,315 | INFO     | sum of deviations: 157243238183.00003
[2025-11-15 09:57:26] 2025-11-15 08:56:28,315 | INFO     | mean x: 1763188976.5
[2025-11-15 09:57:26] 2025-11-15 08:56:28,315 | INFO     | mean y: 2735802.3636363638
[2025-11-15 09:57:26] 2025-11-15 08:56:28,315 | INFO     | intersect: -63086277428.48004
[2025-11-15 09:57:26] 2025-11-15 08:56:28,315 | INFO     | chi2: 3.2785927980862795
[2025-11-15 09:57:26] 2025-11-15 08:56:28,315 | INFO     | current chi2=3.2785927980862795 (change=-0.0033951681076383943 %)
[2025-11-15 09:57:26] 2025-11-15 08:56:28,315 | INFO     | right removable region: 241
[2025-11-15 09:57:26] 2025-11-15 08:56:28,316 | INFO     | sum of square deviations: 4672638308.0
[2025-11-15 09:57:26] 2025-11-15 08:56:28,316 | INFO     | sum of deviations: 53275717437.0
[2025-11-15 09:57:26] 2025-11-15 08:56:28,316 | INFO     | mean x: 1763189434.0
[2025-11-15 09:57:26] 2025-11-15 08:56:28,316 | INFO     | mean y: 2761155.5425101216
[2025-11-15 09:57:26] 2025-11-15 08:56:28,316 | INFO     | intersect: -20100481569.84927
[2025-11-15 09:57:26] 2025-11-15 08:56:28,316 | INFO     | chi2: 1.6834117515473743
[2025-11-15 09:57:26] 2025-11-15 08:56:28,316 | INFO     | current chi2=1.6834117515473743 (change=62.00109031281613 %)
[2025-11-15 09:57:26] 2025-11-15 08:56:28,317 | INFO     | sum of square deviations: 4394577280.5
[2025-11-15 09:57:26] 2025-11-15 08:56:28,317 | INFO     | sum of deviations: 27873102801.499985
[2025-11-15 09:57:26] 2025-11-15 08:56:28,317 | INFO     | mean x: 1763189586.5
[2025-11-15 09:57:26] 2025-11-15 08:56:28,317 | INFO     | mean y: 2774961.0619834713
[2025-11-15 09:57:26] 2025-11-15 08:56:28,317 | INFO     | intersect: -11180454156.58756
[2025-11-15 09:57:26] 2025-11-15 08:56:28,317 | INFO     | chi2: 1.2082351753114104
[2025-11-15 09:57:26] 2025-11-15 08:56:28,317 | INFO     | current chi2=1.2082351753114104 (change=28.226996502738356 %)
[2025-11-15 09:57:26] 2025-11-15 08:56:28,318 | INFO     | sum of square deviations: 4127772278.0
[2025-11-15 09:57:26] 2025-11-15 08:56:28,318 | INFO     | sum of deviations: 23152271779.0
[2025-11-15 09:57:26] 2025-11-15 08:56:28,318 | INFO     | mean x: 1763189739.0
[2025-11-15 09:57:26] 2025-11-15 08:56:28,318 | INFO     | mean y: 2777656.0379746836
[2025-11-15 09:57:26] 2025-11-15 08:56:28,318 | INFO     | intersect: -9886781478.03596
[2025-11-15 09:57:26] 2025-11-15 08:56:28,319 | INFO     | chi2: 1.2060590426122746
[2025-11-15 09:57:26] 2025-11-15 08:56:28,319 | INFO     | current chi2=1.2060590426122746 (change=0.18010837158212856 %)
[2025-11-15 09:57:26] 2025-11-15 08:56:28,319 | INFO     | left removable region: 30
[2025-11-15 09:57:26] 2025-11-15 08:56:28,319 | INFO     | sum of square deviations: 2912836010.0
[2025-11-15 09:57:26] 2025-11-15 08:56:28,319 | INFO     | sum of deviations: 43334816324.99999
[2025-11-15 09:57:26] 2025-11-15 08:56:28,319 | INFO     | mean x: 1763189861.0
[2025-11-15 09:57:26] 2025-11-15 08:56:28,319 | INFO     | mean y: 2802015.9431279623
[2025-11-15 09:57:26] 2025-11-15 08:56:28,319 | INFO     | intersect: -26228509499.783867
[2025-11-15 09:57:26] 2025-11-15 08:56:28,319 | INFO     | chi2: 0.026291487721521584
[2025-11-15 09:57:26] 2025-11-15 08:56:28,320 | INFO     | current memory leak: 14.88 B/s (using 211 data points, chi2=0.03)
[2025-11-15 09:57:26] 2025-11-15 08:56:28,320 | INFO     | could have reported an average CPU frequency of 3763 MHz (12 samples)
[2025-11-15 09:57:26] 2025-11-15 08:56:28,320 | INFO     | ..............................
[2025-11-15 09:57:26] 2025-11-15 08:56:28,320 | INFO     | . Timing measurements:
[2025-11-15 09:57:26] 2025-11-15 08:56:28,320 | INFO     | . get job = 0 s
[2025-11-15 09:57:26] 2025-11-15 08:56:28,320 | INFO     | . initial setup = 1 s
[2025-11-15 09:57:26] 2025-11-15 08:56:28,320 | INFO     | . payload setup = 6 s
[2025-11-15 09:57:26] 2025-11-15 08:56:28,320 | INFO     | . stage-in = 0 s
[2025-11-15 09:57:26] 2025-11-15 08:56:28,320 | INFO     | . payload execution = 15352 s
[2025-11-15 09:57:26] 2025-11-15 08:56:28,320 | INFO     | . stage-out = 0 s
[2025-11-15 09:57:26] 2025-11-15 08:56:28,320 | INFO     | . log creation = 0 s
[2025-11-15 09:57:26] 2025-11-15 08:56:28,320 | INFO     | ..............................
[2025-11-15 09:57:26] 2025-11-15 08:56:28,583 | INFO     | 
[2025-11-15 09:57:26] 2025-11-15 08:56:28,583 | INFO     | job summary report
[2025-11-15 09:57:26] 2025-11-15 08:56:28,583 | INFO     | --------------------------------------------------
[2025-11-15 09:57:26] 2025-11-15 08:56:28,583 | INFO     | PanDA job id: 6886146372
[2025-11-15 09:57:26] 2025-11-15 08:56:28,583 | INFO     | task id: 47450870
[2025-11-15 09:57:26] 2025-11-15 08:56:28,583 | INFO     | errors: (none)
[2025-11-15 09:57:26] 2025-11-15 08:56:28,583 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-15 09:57:26] 2025-11-15 08:56:28,583 | INFO     | pilot state: finished 
[2025-11-15 09:57:26] 2025-11-15 08:56:28,583 | INFO     | transexitcode: 0
[2025-11-15 09:57:26] 2025-11-15 08:56:28,583 | INFO     | exeerrorcode: 0
[2025-11-15 09:57:26] 2025-11-15 08:56:28,583 | INFO     | exeerrordiag: 
[2025-11-15 09:57:26] 2025-11-15 08:56:28,583 | INFO     | exitcode: 0
[2025-11-15 09:57:26] 2025-11-15 08:56:28,584 | INFO     | exitmsg: OK
[2025-11-15 09:57:26] 2025-11-15 08:56:28,584 | INFO     | cpuconsumptiontime: 59271 s
[2025-11-15 09:57:26] 2025-11-15 08:56:28,584 | INFO     | nevents: 1000
[2025-11-15 09:57:26] 2025-11-15 08:56:28,584 | INFO     | neventsw: 0
[2025-11-15 09:57:26] 2025-11-15 08:56:28,584 | INFO     | pid: 1087028
[2025-11-15 09:57:26] 2025-11-15 08:56:28,584 | INFO     | pgrp: 1087028
[2025-11-15 09:57:26] 2025-11-15 08:56:28,584 | INFO     | corecount: 4
[2025-11-15 09:57:26] 2025-11-15 08:56:28,584 | INFO     | event service: False
[2025-11-15 09:57:26] 2025-11-15 08:56:28,584 | INFO     | sizes: {0: 2298843, 4: 2299105, 11: 2299133, 15363: 2350264, 15366: 2359264, 15367: 2359320, 15374: 2359694}
[2025-11-15 09:57:26] 2025-11-15 08:56:28,584 | INFO     | --------------------------------------------------
[2025-11-15 09:57:26] 2025-11-15 08:56:28,584 | INFO     | 
[2025-11-15 09:57:26] 2025-11-15 08:56:28,584 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-11-15 09:57:26] 2025-11-15 08:56:28,605 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-15 09:57:26] 2025-11-15 08:56:28,605 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-15 09:57:26] 2025-11-15 08:56:28,605 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-15 09:57:26] 2025-11-15 08:56:28,605 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-15 09:57:26] 2025-11-15 08:56:28,605 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-15 09:57:26] 2025-11-15 08:56:28,605 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-15 09:57:26] 2025-11-15 08:56:28,605 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-15 09:57:26] 2025-11-15 08:56:28,605 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-15 09:57:26] 2025-11-15 08:56:28,605 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-15 09:57:26] 2025-11-15 08:56:28,605 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-15 09:57:26] 2025-11-15 08:56:28,606 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-15 09:57:26] 2025-11-15 08:56:28,606 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-15 09:57:26] 2025-11-15 08:56:28,606 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-15 09:57:26] 2025-11-15 08:56:28,606 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-15 09:57:26] 2025-11-15 08:56:28,606 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-15 09:57:26] 2025-11-15 08:56:28,606 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-15 09:57:26] 2025-11-15 08:56:28,606 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-15 09:57:26] 2025-11-15 08:56:28,606 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-15 09:57:26] 2025-11-15 08:56:28,606 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-15 09:57:26] 2025-11-15 08:56:28,606 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-15 09:57:26] 2025-11-15 08:56:28,606 | INFO     | job 6886146372 has completed (purged errors)
[2025-11-15 09:57:26] 2025-11-15 08:56:28,606 | INFO     | overall cleanup function is called
[2025-11-15 09:57:26] 2025-11-15 08:56:29,616 | INFO     | --- collectZombieJob: --- 10, [1087028]
[2025-11-15 09:57:26] 2025-11-15 08:56:29,616 | INFO     | zombie collector waiting for pid 1087028
[2025-11-15 09:57:26] 2025-11-15 08:56:29,616 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-15 09:57:26] 2025-11-15 08:56:29,616 | INFO     | collected zombie processes
[2025-11-15 09:57:26] 2025-11-15 08:56:29,616 | INFO     | will attempt to kill all subprocesses of pid=1087028
[2025-11-15 09:57:26] 2025-11-15 08:56:29,660 | INFO     | process IDs to be killed: [1087028] (in reverse order)
[2025-11-15 09:57:26] 2025-11-15 08:56:29,693 | WARNING  | found no corresponding commands to process id(s)
[2025-11-15 09:57:26] 2025-11-15 08:56:29,694 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-15 09:57:26] 2025-11-15 08:56:29,695 | INFO     | did not find any defunct processes belonging to 1087028
[2025-11-15 09:57:26] 2025-11-15 08:56:29,697 | INFO     | did not find any defunct processes belonging to 1087028
[2025-11-15 09:57:26] 2025-11-15 08:56:29,697 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-15 09:57:26] 2025-11-15 08:56:29,698 | INFO     | ready for new job
[2025-11-15 09:57:26] 2025-11-15 08:56:29,698 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-15 09:57:26] 2025-11-15 08:56:29,699 | INFO     | ***************************************
[2025-11-15 09:57:26] 2025-11-15 08:56:29,699 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-15 09:57:26] 2025-11-15 08:56:29,699 | INFO     | ***************************************
[2025-11-15 09:57:26] 2025-11-15 08:56:29,699 | INFO     | 
[2025-11-15 09:57:26] 2025-11-15 08:56:29,699 | INFO     | architecture information:
[2025-11-15 09:57:26] 2025-11-15 08:56:29,700 | INFO     | executing command: cat /etc/os-release
[2025-11-15 09:57:26] 2025-11-15 08:56:29,714 | INFO     | cat /etc/os-release:
[2025-11-15 09:57:26] NAME="CentOS Linux"
[2025-11-15 09:57:26] VERSION="7 (Core)"
[2025-11-15 09:57:26] ID="centos"
[2025-11-15 09:57:26] ID_LIKE="rhel fedora"
[2025-11-15 09:57:26] VERSION_ID="7"
[2025-11-15 09:57:26] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-15 09:57:26] ANSI_COLOR="0;31"
[2025-11-15 09:57:26] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-15 09:57:26] HOME_URL="https://www.centos.org/"
[2025-11-15 09:57:26] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-15 09:57:26] 
[2025-11-15 09:57:26] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-15 09:57:26] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-15 09:57:26] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-15 09:57:26] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-15 09:57:26] 
[2025-11-15 09:57:26] 2025-11-15 08:56:29,714 | INFO     | ***************************************
[2025-11-15 09:57:26] 2025-11-15 08:56:30,217 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-11-15 09:57:26] 2025-11-15 08:56:30,236 | INFO     | sufficient remaining disk space (328871182336 B)
[2025-11-15 09:57:26] 2025-11-15 08:56:30,236 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-15 09:57:26] 2025-11-15 08:56:30,236 | INFO     | current server update state: UPDATING_FINAL
[2025-11-15 09:57:26] 2025-11-15 08:56:30,236 | INFO     | update_server=False
[2025-11-15 09:57:26] 2025-11-15 08:56:30,236 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-15 09:57:26] 2025-11-15 08:56:30,237 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-15 09:57:26] 2025-11-15 08:56:30,237 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-15 09:57:26] 2025-11-15 08:56:30,237 | INFO     | aborting loop
[2025-11-15 09:57:26] 2025-11-15 08:56:30,394 | INFO     | all data control threads have been joined
[2025-11-15 09:57:26] 2025-11-15 08:56:30,681 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-15 09:57:26] 2025-11-15 08:56:30,841 | INFO     | all payload control threads have been joined
[2025-11-15 09:57:26] 2025-11-15 08:56:30,958 | INFO     | all job control threads have been joined
[2025-11-15 09:57:26] 2025-11-15 08:56:31,242 | INFO     | [job] queue monitor thread has finished
[2025-11-15 09:57:26] 2025-11-15 08:56:31,242 | INFO     | [job] retrieve thread has finished
[2025-11-15 09:57:26] 2025-11-15 08:56:31,243 | INFO     | [job] job monitor thread has finished
[2025-11-15 09:57:26] 2025-11-15 08:56:31,399 | INFO     | [data] control thread has finished
[2025-11-15 09:57:26] 2025-11-15 08:56:31,572 | INFO     | [payload] validate_post thread has finished
[2025-11-15 09:57:26] 2025-11-15 08:56:31,613 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-15 09:57:26] 2025-11-15 08:56:31,783 | INFO     | [data] copytool_in thread has finished
[2025-11-15 09:57:26] 2025-11-15 08:56:31,847 | INFO     | [payload] control thread has finished
[2025-11-15 09:57:26] 2025-11-15 08:56:31,949 | INFO     | [payload] execute_payloads thread has finished
[2025-11-15 09:57:26] 2025-11-15 08:56:31,963 | INFO     | [job] control thread has finished
[2025-11-15 09:57:26] 2025-11-15 08:56:32,244 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-15 09:57:26] 2025-11-15 08:56:32,427 | INFO     | [job] validate thread has finished
[2025-11-15 09:57:26] 2025-11-15 08:56:32,541 | INFO     | [job] create_data_payload thread has finished
[2025-11-15 09:57:26] 2025-11-15 08:56:32,631 | INFO     | [payload] failed_post thread has finished
[2025-11-15 09:57:26] 2025-11-15 08:56:32,649 | INFO     | [payload] validate_pre thread has finished
[2025-11-15 09:57:26] 2025-11-15 08:56:32,687 | INFO     | [data] copytool_out thread has finished
[2025-11-15 09:57:26] 2025-11-15 08:56:35,620 | INFO     | [data] queue_monitor thread has finished
[2025-11-15 09:57:26] 2025-11-15 08:57:00,274 | INFO     | PID=1079792 has CPU usage=2.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-15 09:57:26] 2025-11-15 08:57:00,274 | INFO     | found 0 job(s) in 20 queues
[2025-11-15 09:57:26] 2025-11-15 08:57:00,274 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-15 09:57:26] 2025-11-15 08:57:00,274 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-15 09:57:26] 2025-11-15 08:57:19,688 | INFO     | [monitor] cgroup control has ended
[2025-11-15 09:57:26] 2025-11-15 08:57:21,707 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140626990475072)>', '<ExcThread(monitor, started 140626171500288)>']
[2025-11-15 09:57:26] 2025-11-15 08:57:22,387 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-15 09:57:26] 2025-11-15 08:57:22,387 | INFO     | [monitor] control thread has ended
[2025-11-15 09:57:26] 2025-11-15 08:57:26,733 | INFO     | all workflow threads have been joined
[2025-11-15 09:57:26] 2025-11-15 08:57:26,733 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-15 09:57:26] 2025-11-15 08:57:26,733 | INFO     | traces error code: 0
[2025-11-15 09:57:26] 2025-11-15 08:57:26,733 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-15 09:57:26] 2025-11-15 08:57:26,814 [wrapper] ==== pilot stdout END ====
[2025-11-15 09:57:26] 2025-11-15 08:57:26,818 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-15 09:57:26] 2025-11-15 08:57:26,822 [wrapper] pilotpid: 1079792
[2025-11-15 09:57:26] 2025-11-15 08:57:26,826 [wrapper] Pilot exit status: 0
[2025-11-15 09:57:26] 2025-11-15 08:57:26,837 [wrapper] pandaids: 6886146372
[2025-11-15 09:57:26] 2025-11-15 08:57:26,860 [wrapper] cleanup supervisor_pilot 1118059 1079793
[2025-11-15 09:57:26] 2025-11-15 08:57:26,864 [wrapper] Test setup, not cleaning
[2025-11-15 09:57:26] 2025-11-15 08:57:26,868 [wrapper] apfmon messages muted
[2025-11-15 09:57:26] 2025-11-15 08:57:26,872 [wrapper] ==== wrapper stdout END ====
[2025-11-15 09:57:26] 2025-11-15 08:57:26,876 [wrapper] ==== wrapper stderr END ====
[2025-11-15 09:57:26]  *** Error codes and diagnostics ***
[2025-11-15 09:57:26]     "exeErrorCode": 0,
[2025-11-15 09:57:26]     "exeErrorDiag": "",
[2025-11-15 09:57:26]     "pilotErrorCode": 0,
[2025-11-15 09:57:26]     "pilotErrorDiag": "",
[2025-11-15 09:57:26]  *** Listing of results directory ***
[2025-11-15 09:57:26] total 914088
[2025-11-15 09:57:26] -rw-r--r-- 1 boinc boinc    576529 Nov 14 14:17 pilot3.tar.gz
[2025-11-15 09:57:26] -rw-r--r-- 1 boinc boinc      5112 Nov 14 15:04 queuedata.json
[2025-11-15 09:57:26] -rwx------ 1 boinc boinc     36292 Nov 14 15:06 runpilot2-wrapper.sh
[2025-11-15 09:57:26] -rw-r--r-- 1 boinc boinc       100 Nov 15 05:39 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-15 09:57:26] -rwxr-xr-x 1 boinc boinc      7986 Nov 15 05:39 run_atlas
[2025-11-15 09:57:26] -rw-r--r-- 1 boinc boinc       105 Nov 15 05:39 job.xml
[2025-11-15 09:57:26] -rw-r--r-- 2 boinc boinc 375163824 Nov 15 05:39 EVNT.14545720._000021.pool.root.1
[2025-11-15 09:57:26] drwxrwx--x 2 boinc boinc      4096 Nov 15 05:39 shared
[2025-11-15 09:57:26] -rw-r--r-- 2 boinc boinc    590130 Nov 15 05:39 input.tar.gz
[2025-11-15 09:57:26] -rw-r--r-- 2 boinc boinc     15120 Nov 15 05:39 start_atlas.sh
[2025-11-15 09:57:26] -rw-r--r-- 1 boinc boinc         0 Nov 15 05:39 boinc_setup_complete
[2025-11-15 09:57:26] -rw-r--r-- 1 boinc boinc      6377 Nov 15 05:39 init_data.xml
[2025-11-15 09:57:26] -rw-r--r-- 1 boinc boinc         0 Nov 15 05:39 boinc_lockfile
[2025-11-15 09:57:26] -rw-r--r-- 1 boinc boinc      2928 Nov 15 05:39 pandaJob.out
[2025-11-15 09:57:26] -rw------- 1 boinc boinc    988594 Nov 15 05:39 agis_schedconf.cvmfs.json
[2025-11-15 09:57:26] drwx------ 5 boinc boinc      4096 Nov 15 05:40 pilot3
[2025-11-15 09:57:26] -rw-r--r-- 1 boinc boinc       531 Nov 15 09:52 boinc_task_state.xml
[2025-11-15 09:57:26] -rw------- 1 boinc boinc 550116027 Nov 15 09:56 HITS.47450870._000208.pool.root.1
[2025-11-15 09:57:26] -rw------- 1 boinc boinc      1023 Nov 15 09:56 memory_monitor_summary.json
[2025-11-15 09:57:26] -rw------- 1 boinc boinc   1526297 Nov 15 09:56 agis_ddmendpoints.agis.ALL.json
[2025-11-15 09:57:26] -rw------- 1 boinc boinc   1204882 Nov 15 09:56 log.47450870._000208.job.log.tgz.1
[2025-11-15 09:57:26] -rw------- 1 boinc boinc        95 Nov 15 09:56 pilot_heartbeat.json
[2025-11-15 09:57:26] -rw------- 1 boinc boinc     27733 Nov 15 09:56 heartbeat.json
[2025-11-15 09:57:26] -rw-r--r-- 1 boinc boinc        28 Nov 15 09:57 wrapper_checkpoint.txt
[2025-11-15 09:57:26] -rw-r--r-- 1 boinc boinc      8192 Nov 15 09:57 boinc_mmap_file
[2025-11-15 09:57:26] -rw------- 1 boinc boinc      4752 Nov 15 09:57 pilotlog.txt
[2025-11-15 09:57:26] -rw------- 1 boinc boinc   2189755 Nov 15 09:57 log.47450870._000208.job.log.1
[2025-11-15 09:57:26] -rw------- 1 boinc boinc       353 Nov 15 09:57 output.list
[2025-11-15 09:57:26] -rw-r--r-- 1 boinc boinc       620 Nov 15 09:57 runtime_log
[2025-11-15 09:57:26] -rw------- 1 boinc boinc   3430400 Nov 15 09:57 result.tar.gz
[2025-11-15 09:57:26] -rw-r--r-- 1 boinc boinc      8788 Nov 15 09:57 runtime_log.err
[2025-11-15 09:57:26] -rw------- 1 boinc boinc       666 Nov 15 09:57 neMKDmlc9d8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm4bJODmrfGOpn.diag
[2025-11-15 09:57:26] -rw-r--r-- 1 boinc boinc     21023 Nov 15 09:57 stderr.txt
[2025-11-15 09:57:26] HITS file was successfully produced:
[2025-11-15 09:57:26] -rw------- 1 boinc boinc 550116027 Nov 15 09:56 shared/HITS.pool.root.1
[2025-11-15 09:57:26]  *** Contents of shared directory: ***
[2025-11-15 09:57:26] total 907552
[2025-11-15 09:57:26] -rw-r--r-- 2 boinc boinc 375163824 Nov 15 05:39 ATLAS.root_0
[2025-11-15 09:57:26] -rw-r--r-- 2 boinc boinc    590130 Nov 15 05:39 input.tar.gz
[2025-11-15 09:57:26] -rw-r--r-- 2 boinc boinc     15120 Nov 15 05:39 start_atlas.sh
[2025-11-15 09:57:26] -rw------- 1 boinc boinc 550116027 Nov 15 09:56 HITS.pool.root.1
[2025-11-15 09:57:26] -rw------- 1 boinc boinc   3430400 Nov 15 09:57 result.tar.gz
09:57:28 (1076013): run_atlas exited; CPU time 59268.783445
09:57:28 (1076013): called boinc_finish(0)

</stderr_txt>
]]>

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