Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
17:37:13 (275431): wrapper (7.7.26015): starting
17:37:13 (275431): wrapper: running run_atlas (--nthreads 12)
[2025-11-14 17:37:13] Arguments: --nthreads 12
[2025-11-14 17:37:13] Threads: 12
[2025-11-14 17:37:13] Checking for CVMFS
[2025-11-14 17:37:14] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-14 17:37:14] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-14 17:37:14] Running cvmfs_config stat atlas.cern.ch
[2025-11-14 17:37:15] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-14 17:37:15] 2.13.3.0 9060 9316 264372 152862 2 456 31227028 46080001 20568 130560 0 42212502 99.836 25964519 28905 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://[2001:718:401:6025:1:0:2:0]:3128 1
[2025-11-14 17:37:15] CVMFS is ok
[2025-11-14 17:37:15] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-14 17:37:15] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-14 17:37:15] Further information can be found at the LHC@home message board.
[2025-11-14 17:37:15] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-14 17:37:15] Checking for apptainer binary...
[2025-11-14 17:37:15] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-14 17:37:15] Running /usr/bin/apptainer --version
[2025-11-14 17:37:15] apptainer version 1.4.3-1.el9
[2025-11-14 17:37:15] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-14 17:37:16] mff2104.farm.particle.cz
[2025-11-14 17:37:16] apptainer works
[2025-11-14 17:37:16] Set ATHENA_PROC_NUMBER=12
[2025-11-14 17:37:16] Set ATHENA_CORE_NUMBER=12
[2025-11-14 17:37:17] Starting ATLAS job with PandaID=6886199807
[2025-11-14 17:37:17] Running command: /usr/bin/apptainer exec -B /cvmfs,/scratch/.boinc/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-14 22:18:34]  *** The last 200 lines of the pilot log: ***
[2025-11-14 22:18:34] 2025-11-14 21:17:45,231 | INFO     | this job has now completed (state=finished)
[2025-11-14 22:18:34] 2025-11-14 21:17:45,231 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-11-14 22:18:34] 2025-11-14 21:17:45,231 | INFO     | log transfer has been attempted: DONE
[2025-11-14 22:18:34] 2025-11-14 21:17:45,231 | INFO     | job 6886199807 has finished - writing final server update
[2025-11-14 22:18:34] 2025-11-14 21:17:45,232 | INFO     | total number of processed events: 1000 (read)
[2025-11-14 22:18:34] 2025-11-14 21:17:45,234 | INFO     | executing command: lscpu
[2025-11-14 22:18:34] 2025-11-14 21:17:45,335 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-11-14 22:18:34] 2025-11-14 21:17:45,700 | INFO     | time since job start (16725s) is within the limit (172800.0s)
[2025-11-14 22:18:34] 2025-11-14 21:17:45,755 | INFO     | monitor loop #1159: job 0:6886199807 is in state 'finished'
[2025-11-14 22:18:34] 2025-11-14 21:17:45,755 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-14 22:18:34] 2025-11-14 21:17:47,705 | INFO     | time since job start (16727s) is within the limit (172800.0s)
[2025-11-14 22:18:34] 2025-11-14 21:17:48,258 | INFO     | monitor loop #1160: job 0:6886199807 is in state 'finished'
[2025-11-14 22:18:34] 2025-11-14 21:17:48,259 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-14 22:18:34] 2025-11-14 21:17:49,711 | INFO     | time since job start (16729s) is within the limit (172800.0s)
[2025-11-14 22:18:34] 2025-11-14 21:17:50,761 | INFO     | monitor loop #1161: job 0:6886199807 is in state 'finished'
[2025-11-14 22:18:34] 2025-11-14 21:17:50,761 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-14 22:18:34] 2025-11-14 21:17:51,717 | INFO     | time since job start (16731s) is within the limit (172800.0s)
[2025-11-14 22:18:34] 2025-11-14 21:17:52,703 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-14 22:18:34] 2025-11-14 21:17:52,716 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2810.990281250001
[2025-11-14 22:18:34] 2025-11-14 21:17:52,732 | INFO     | using path: /scratch/.boinc/slots/3/PanDA_Pilot-6886199807/memory_monitor_summary.json (trf name=prmon)
[2025-11-14 22:18:34] 2025-11-14 21:17:52,733 | INFO     | extracted standard info from prmon json
[2025-11-14 22:18:34] 2025-11-14 21:17:52,733 | INFO     | extracted standard memory fields from prmon json
[2025-11-14 22:18:34] 2025-11-14 21:17:52,733 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-14 22:18:34] 2025-11-14 21:17:52,737 | INFO     | fitting pss+swap vs Time
[2025-11-14 22:18:34] 2025-11-14 21:17:52,738 | INFO     | sum of square deviations: 6035570097.977708
[2025-11-14 22:18:34] 2025-11-14 21:17:52,740 | INFO     | sum of deviations: 720905722288.699
[2025-11-14 22:18:34] 2025-11-14 21:17:52,740 | INFO     | mean x: 1763146830.4312267
[2025-11-14 22:18:34] 2025-11-14 21:17:52,740 | INFO     | mean y: 3632854.8215613384
[2025-11-14 22:18:34] 2025-11-14 21:17:52,740 | INFO     | intersect: -210591657840.07715
[2025-11-14 22:18:34] 2025-11-14 21:17:52,740 | INFO     | chi2: 25.960176379451838
[2025-11-14 22:18:34] 2025-11-14 21:17:52,740 | INFO     | sum of square deviations: 5705337132.541672
[2025-11-14 22:18:34] 2025-11-14 21:17:52,742 | INFO     | sum of deviations: 815168548411.0829
[2025-11-14 22:18:34] 2025-11-14 21:17:52,742 | INFO     | mean x: 1763146677.9583333
[2025-11-14 22:18:34] 2025-11-14 21:17:52,742 | INFO     | mean y: 3676243.643939394
[2025-11-14 22:18:34] 2025-11-14 21:17:52,742 | INFO     | intersect: -251911624240.419
[2025-11-14 22:18:34] 2025-11-14 21:17:52,743 | INFO     | chi2: 23.787720475619086
[2025-11-14 22:18:34] 2025-11-14 21:17:52,743 | INFO     | current chi2=23.787720475619086 (change=8.368417348474983 %)
[2025-11-14 22:18:34] 2025-11-14 21:17:52,743 | INFO     | right removable region: 263
[2025-11-14 22:18:34] 2025-11-14 21:17:52,743 | INFO     | sum of square deviations: 5705102282.541672
[2025-11-14 22:18:34] 2025-11-14 21:17:52,745 | INFO     | sum of deviations: 573286591434.2496
[2025-11-14 22:18:34] 2025-11-14 21:17:52,745 | INFO     | mean x: 1763146982.9583333
[2025-11-14 22:18:34] 2025-11-14 21:17:52,745 | INFO     | mean y: 3700987.022727273
[2025-11-14 22:18:34] 2025-11-14 21:17:52,745 | INFO     | intersect: -177169025109.5634
[2025-11-14 22:18:34] 2025-11-14 21:17:52,745 | INFO     | chi2: 19.47378000353317
[2025-11-14 22:18:34] 2025-11-14 21:17:52,745 | INFO     | current chi2=19.47378000353317 (change=24.98594878982725 %)
[2025-11-14 22:18:34] 2025-11-14 21:17:52,745 | INFO     | left removable region: 10
[2025-11-14 22:18:34] 2025-11-14 21:17:52,746 | INFO     | sum of square deviations: 5021235103.16992
[2025-11-14 22:18:34] 2025-11-14 21:17:52,747 | INFO     | sum of deviations: 532024438927.88556
[2025-11-14 22:18:34] 2025-11-14 21:17:52,747 | INFO     | mean x: 1763146952.5177865
[2025-11-14 22:18:34] 2025-11-14 21:17:52,747 | INFO     | mean y: 3815700.581027668
[2025-11-14 22:18:34] 2025-11-14 21:17:52,747 | INFO     | intersect: -186810234804.34375
[2025-11-14 22:18:34] 2025-11-14 21:17:52,748 | INFO     | chi2: 11.78291713920634
[2025-11-14 22:18:34] 2025-11-14 21:17:52,748 | INFO     | current memory leak: 105.95 B/s (using 253 data points, chi2=11.78)
[2025-11-14 22:18:34] 2025-11-14 21:17:52,748 | INFO     | could have reported an average CPU frequency of 2760 MHz (13 samples)
[2025-11-14 22:18:34] 2025-11-14 21:17:52,749 | INFO     | ..............................
[2025-11-14 22:18:34] 2025-11-14 21:17:52,749 | INFO     | . Timing measurements:
[2025-11-14 22:18:34] 2025-11-14 21:17:52,749 | INFO     | . get job = 0 s
[2025-11-14 22:18:34] 2025-11-14 21:17:52,749 | INFO     | . initial setup = 6 s
[2025-11-14 22:18:34] 2025-11-14 21:17:52,749 | INFO     | . payload setup = 171 s
[2025-11-14 22:18:34] 2025-11-14 21:17:52,749 | INFO     | . stage-in = 0 s
[2025-11-14 22:18:34] 2025-11-14 21:17:52,749 | INFO     | . payload execution = 16445 s
[2025-11-14 22:18:34] 2025-11-14 21:17:52,749 | INFO     | . stage-out = 2 s
[2025-11-14 22:18:34] 2025-11-14 21:17:52,749 | INFO     | . log creation = 0 s
[2025-11-14 22:18:34] 2025-11-14 21:17:52,749 | INFO     | ..............................
[2025-11-14 22:18:34] 2025-11-14 21:17:52,827 | INFO     | 
[2025-11-14 22:18:34] 2025-11-14 21:17:52,828 | INFO     | job summary report
[2025-11-14 22:18:34] 2025-11-14 21:17:52,828 | INFO     | --------------------------------------------------
[2025-11-14 22:18:34] 2025-11-14 21:17:52,828 | INFO     | PanDA job id: 6886199807
[2025-11-14 22:18:34] 2025-11-14 21:17:52,828 | INFO     | task id: 47450870
[2025-11-14 22:18:34] 2025-11-14 21:17:52,828 | INFO     | errors: (none)
[2025-11-14 22:18:34] 2025-11-14 21:17:52,828 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-14 22:18:34] 2025-11-14 21:17:52,828 | INFO     | pilot state: finished 
[2025-11-14 22:18:34] 2025-11-14 21:17:52,828 | INFO     | transexitcode: 0
[2025-11-14 22:18:34] 2025-11-14 21:17:52,828 | INFO     | exeerrorcode: 0
[2025-11-14 22:18:34] 2025-11-14 21:17:52,828 | INFO     | exeerrordiag: 
[2025-11-14 22:18:34] 2025-11-14 21:17:52,828 | INFO     | exitcode: 0
[2025-11-14 22:18:34] 2025-11-14 21:17:52,828 | INFO     | exitmsg: OK
[2025-11-14 22:18:34] 2025-11-14 21:17:52,828 | INFO     | cpuconsumptiontime: 141020 s
[2025-11-14 22:18:34] 2025-11-14 21:17:52,828 | INFO     | nevents: 1000
[2025-11-14 22:18:34] 2025-11-14 21:17:52,828 | INFO     | neventsw: 0
[2025-11-14 22:18:34] 2025-11-14 21:17:52,828 | INFO     | pid: 311889
[2025-11-14 22:18:34] 2025-11-14 21:17:52,828 | INFO     | pgrp: 311889
[2025-11-14 22:18:34] 2025-11-14 21:17:52,829 | INFO     | corecount: 12
[2025-11-14 22:18:34] 2025-11-14 21:17:52,829 | INFO     | event service: False
[2025-11-14 22:18:34] 2025-11-14 21:17:52,829 | INFO     | sizes: {0: 2298674, 1: 2298873, 12: 2298873, 23: 2298901, 33: 2298929, 44: 2298985, 50: 2299403, 55: 2299431, 16621: 2350824, 16623: 2359820, 16624: 2359876, 16632
[2025-11-14 22:18:34] 2025-11-14 21:17:52,829 | INFO     | --------------------------------------------------
[2025-11-14 22:18:34] 2025-11-14 21:17:52,829 | INFO     | 
[2025-11-14 22:18:34] 2025-11-14 21:17:52,829 | INFO     | executing command: ls -lF /scratch/.boinc/slots/3
[2025-11-14 22:18:34] 2025-11-14 21:17:52,861 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-14 22:18:34] 2025-11-14 21:17:52,861 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-14 22:18:34] 2025-11-14 21:17:52,861 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-14 22:18:34] 2025-11-14 21:17:52,862 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-14 22:18:34] 2025-11-14 21:17:52,862 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-14 22:18:34] 2025-11-14 21:17:52,862 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-14 22:18:34] 2025-11-14 21:17:52,862 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-14 22:18:34] 2025-11-14 21:17:52,862 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-14 22:18:34] 2025-11-14 21:17:52,862 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-14 22:18:34] 2025-11-14 21:17:52,862 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-14 22:18:34] 2025-11-14 21:17:52,862 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-14 22:18:34] 2025-11-14 21:17:52,862 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-14 22:18:34] 2025-11-14 21:17:52,862 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-14 22:18:34] 2025-11-14 21:17:52,862 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-14 22:18:34] 2025-11-14 21:17:52,862 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-14 22:18:34] 2025-11-14 21:17:52,862 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-14 22:18:34] 2025-11-14 21:17:52,862 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-14 22:18:34] 2025-11-14 21:17:52,863 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-14 22:18:34] 2025-11-14 21:17:52,863 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-14 22:18:34] 2025-11-14 21:17:52,863 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-14 22:18:34] 2025-11-14 21:17:52,863 | INFO     | job 6886199807 has completed (purged errors)
[2025-11-14 22:18:34] 2025-11-14 21:17:52,863 | INFO     | overall cleanup function is called
[2025-11-14 22:18:34] 2025-11-14 21:17:53,885 | INFO     | --- collectZombieJob: --- 10, [311889]
[2025-11-14 22:18:34] 2025-11-14 21:17:53,885 | INFO     | zombie collector waiting for pid 311889
[2025-11-14 22:18:34] 2025-11-14 21:17:53,886 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-14 22:18:34] 2025-11-14 21:17:53,886 | INFO     | collected zombie processes
[2025-11-14 22:18:34] 2025-11-14 21:17:53,886 | INFO     | will attempt to kill all subprocesses of pid=311889
[2025-11-14 22:18:34] 2025-11-14 21:17:54,394 | INFO     | process IDs to be killed: [311889] (in reverse order)
[2025-11-14 22:18:34] 2025-11-14 21:17:54,578 | WARNING  | found no corresponding commands to process id(s)
[2025-11-14 22:18:34] 2025-11-14 21:17:54,578 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-14 22:18:34] 2025-11-14 21:17:54,602 | INFO     | did not find any defunct processes belonging to 311889
[2025-11-14 22:18:34] 2025-11-14 21:17:54,625 | INFO     | did not find any defunct processes belonging to 311889
[2025-11-14 22:18:34] 2025-11-14 21:17:54,626 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-14 22:18:34] 2025-11-14 21:17:54,627 | INFO     | ready for new job
[2025-11-14 22:18:34] 2025-11-14 21:17:54,627 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-14 22:18:34] 2025-11-14 21:17:54,629 | INFO     | ***************************************
[2025-11-14 22:18:34] 2025-11-14 21:17:54,629 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-14 22:18:34] 2025-11-14 21:17:54,629 | INFO     | ***************************************
[2025-11-14 22:18:34] 2025-11-14 21:17:54,629 | INFO     | 
[2025-11-14 22:18:34] 2025-11-14 21:17:54,635 | INFO     | architecture information:
[2025-11-14 22:18:34] 2025-11-14 21:17:54,636 | INFO     | executing command: cat /etc/os-release
[2025-11-14 22:18:34] 2025-11-14 21:17:54,657 | INFO     | cat /etc/os-release:
[2025-11-14 22:18:34] NAME="CentOS Linux"
[2025-11-14 22:18:34] VERSION="7 (Core)"
[2025-11-14 22:18:34] ID="centos"
[2025-11-14 22:18:34] ID_LIKE="rhel fedora"
[2025-11-14 22:18:34] VERSION_ID="7"
[2025-11-14 22:18:34] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-14 22:18:34] ANSI_COLOR="0;31"
[2025-11-14 22:18:34] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-14 22:18:34] HOME_URL="https://www.centos.org/"
[2025-11-14 22:18:34] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-14 22:18:34] 
[2025-11-14 22:18:34] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-14 22:18:34] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-14 22:18:34] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-14 22:18:34] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-14 22:18:34] 
[2025-11-14 22:18:34] 2025-11-14 21:17:54,658 | INFO     | ***************************************
[2025-11-14 22:18:34] 2025-11-14 21:17:55,161 | INFO     | executing command: df -mP /scratch/.boinc/slots/3
[2025-11-14 22:18:34] 2025-11-14 21:17:55,189 | INFO     | sufficient remaining disk space (1619613712384 B)
[2025-11-14 22:18:34] 2025-11-14 21:17:55,190 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-14 22:18:34] 2025-11-14 21:17:55,190 | INFO     | current server update state: UPDATING_FINAL
[2025-11-14 22:18:34] 2025-11-14 21:17:55,190 | INFO     | update_server=False
[2025-11-14 22:18:34] 2025-11-14 21:17:55,190 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-14 22:18:34] 2025-11-14 21:17:55,190 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-14 22:18:34] 2025-11-14 21:17:55,191 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-14 22:18:34] 2025-11-14 21:17:55,191 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-14 22:18:34] 2025-11-14 21:17:55,191 | INFO     | aborting loop
[2025-11-14 22:18:34] 2025-11-14 21:17:55,882 | INFO     | all job control threads have been joined
[2025-11-14 22:18:34] 2025-11-14 21:17:56,076 | INFO     | all data control threads have been joined
[2025-11-14 22:18:34] 2025-11-14 21:17:56,196 | INFO     | [job] retrieve thread has finished
[2025-11-14 22:18:34] 2025-11-14 21:17:56,196 | INFO     | [job] job monitor thread has finished
[2025-11-14 22:18:34] 2025-11-14 21:17:56,288 | INFO     | all payload control threads have been joined
[2025-11-14 22:18:34] 2025-11-14 21:17:56,345 | INFO     | [data] copytool_in thread has finished
[2025-11-14 22:18:34] 2025-11-14 21:17:56,661 | INFO     | [job] validate thread has finished
[2025-11-14 22:18:34] 2025-11-14 21:17:56,701 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-14 22:18:34] 2025-11-14 21:17:56,749 | INFO     | [payload] failed_post thread has finished
[2025-11-14 22:18:34] 2025-11-14 21:17:56,887 | INFO     | [job] control thread has finished
[2025-11-14 22:18:34] 2025-11-14 21:17:56,911 | INFO     | [payload] validate_post thread has finished
[2025-11-14 22:18:34] 2025-11-14 21:17:57,030 | INFO     | [job] create_data_payload thread has finished
[2025-11-14 22:18:34] 2025-11-14 21:17:57,081 | INFO     | [data] control thread has finished
[2025-11-14 22:18:34] 2025-11-14 21:17:57,197 | INFO     | [data] copytool_out thread has finished
[2025-11-14 22:18:34] 2025-11-14 21:17:57,293 | INFO     | [payload] control thread has finished
[2025-11-14 22:18:34] 2025-11-14 21:17:57,420 | INFO     | [payload] execute_payloads thread has finished
[2025-11-14 22:18:34] 2025-11-14 21:17:57,527 | INFO     | [payload] validate_pre thread has finished
[2025-11-14 22:18:34] 2025-11-14 21:17:57,838 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-14 22:18:34] 2025-11-14 21:17:58,843 | INFO     | [job] queue monitor thread has finished
[2025-11-14 22:18:34] 2025-11-14 21:17:59,196 | INFO     | [data] queue_monitor thread has finished
[2025-11-14 22:18:34] 2025-11-14 21:18:25,540 | INFO     | PID=282917 has CPU usage=3.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-11-14 22:18:34] 2025-11-14 21:18:25,540 | INFO     | .. there are 57 such processes running
[2025-11-14 22:18:34] 2025-11-14 21:18:25,541 | INFO     | found 0 job(s) in 20 queues
[2025-11-14 22:18:34] 2025-11-14 21:18:25,541 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-14 22:18:34] 2025-11-14 21:18:25,541 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-14 22:18:34] 2025-11-14 21:18:27,708 | INFO     | [monitor] cgroup control has ended
[2025-11-14 22:18:34] 2025-11-14 21:18:28,506 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140068035876672)>', '<ExcThread(monitor, started 140067263735552)>']
[2025-11-14 22:18:34] 2025-11-14 21:18:28,556 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-14 22:18:34] 2025-11-14 21:18:28,557 | INFO     | [monitor] control thread has ended
[2025-11-14 22:18:34] 2025-11-14 21:18:33,532 | INFO     | all workflow threads have been joined
[2025-11-14 22:18:34] 2025-11-14 21:18:33,532 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-14 22:18:34] 2025-11-14 21:18:33,533 | INFO     | traces error code: 0
[2025-11-14 22:18:34] 2025-11-14 21:18:33,533 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-14 22:18:34] 2025-11-14 21:18:33,879 [wrapper] ==== pilot stdout END ====
[2025-11-14 22:18:34] 2025-11-14 21:18:33,888 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-14 22:18:34] 2025-11-14 21:18:33,893 [wrapper] pilotpid: 282917
[2025-11-14 22:18:34] 2025-11-14 21:18:33,898 [wrapper] Pilot exit status: 0
[2025-11-14 22:18:34] 2025-11-14 21:18:33,925 [wrapper] pandaids: 6886199807
[2025-11-14 22:18:34] 2025-11-14 21:18:34,074 [wrapper] cleanup supervisor_pilot 1427610 282918
[2025-11-14 22:18:34] 2025-11-14 21:18:34,079 [wrapper] Test setup, not cleaning
[2025-11-14 22:18:34] 2025-11-14 21:18:34,085 [wrapper] apfmon messages muted
[2025-11-14 22:18:34] 2025-11-14 21:18:34,090 [wrapper] ==== wrapper stdout END ====
[2025-11-14 22:18:34] 2025-11-14 21:18:34,096 [wrapper] ==== wrapper stderr END ====
[2025-11-14 22:18:34]  *** Error codes and diagnostics ***
[2025-11-14 22:18:34]     "exeErrorCode": 0,
[2025-11-14 22:18:34]     "exeErrorDiag": "",
[2025-11-14 22:18:34]     "pilotErrorCode": 0,
[2025-11-14 22:18:34]     "pilotErrorDiag": "",
[2025-11-14 22:18:34]  *** Listing of results directory ***
[2025-11-14 22:18:34] total 926084
[2025-11-14 22:18:34] -rw-r--r-- 1 boinc boinc    576529 Nov 14 15:24 pilot3.tar.gz
[2025-11-14 22:18:34] -rwx------ 1 boinc boinc     36292 Nov 14 15:58 runpilot2-wrapper.sh
[2025-11-14 22:18:34] -rw-r--r-- 1 boinc boinc      5112 Nov 14 15:58 queuedata.json
[2025-11-14 22:18:34] -rw-r--r-- 1 boinc boinc       100 Nov 14 17:37 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-14 22:18:34] -rwxr-xr-x 1 boinc boinc      7986 Nov 14 17:37 run_atlas
[2025-11-14 22:18:34] -rw-r--r-- 1 boinc boinc       105 Nov 14 17:37 job.xml
[2025-11-14 22:18:34] -rw-r--r-- 1 boinc boinc      6663 Nov 14 17:37 init_data.xml
[2025-11-14 22:18:34] -rw-r--r-- 2 boinc boinc 376465112 Nov 14 17:37 EVNT.14545720._000200.pool.root.1
[2025-11-14 22:18:34] -rw-r--r-- 2 boinc boinc     15120 Nov 14 17:37 start_atlas.sh
[2025-11-14 22:18:34] drwxrwx--x 2 boinc boinc      4096 Nov 14 17:37 shared
[2025-11-14 22:18:34] -rw-r--r-- 2 boinc boinc    590133 Nov 14 17:37 input.tar.gz
[2025-11-14 22:18:34] -rw-r--r-- 1 boinc boinc         0 Nov 14 17:37 boinc_lockfile
[2025-11-14 22:18:34] -rw-r--r-- 1 boinc boinc      2930 Nov 14 17:37 pandaJob.out
[2025-11-14 22:18:34] -rw------- 1 boinc boinc    988618 Nov 14 17:38 agis_schedconf.cvmfs.json
[2025-11-14 22:18:34] drwx------ 5 boinc boinc      4096 Nov 14 17:39 pilot3
[2025-11-14 22:18:34] -rw-r--r-- 1 boinc boinc       532 Nov 14 22:11 boinc_task_state.xml
[2025-11-14 22:18:34] -rw------- 1 boinc boinc 559036718 Nov 14 22:17 HITS.47450870._001820.pool.root.1
[2025-11-14 22:18:34] -rw------- 1 boinc boinc      1033 Nov 14 22:17 memory_monitor_summary.json
[2025-11-14 22:18:34] -rw------- 1 boinc boinc   1526297 Nov 14 22:17 agis_ddmendpoints.agis.ALL.json
[2025-11-14 22:18:34] -rw------- 1 boinc boinc   2126471 Nov 14 22:17 log.47450870._001820.job.log.tgz.1
[2025-11-14 22:18:34] -rw------- 1 boinc boinc        95 Nov 14 22:17 pilot_heartbeat.json
[2025-11-14 22:18:34] -rw------- 1 boinc boinc     27171 Nov 14 22:17 heartbeat.json
[2025-11-14 22:18:34] -rw-r--r-- 1 boinc boinc        28 Nov 14 22:18 wrapper_checkpoint.txt
[2025-11-14 22:18:34] -rw-r--r-- 1 boinc boinc      8192 Nov 14 22:18 boinc_mmap_file
[2025-11-14 22:18:34] -rw------- 1 boinc boinc      4826 Nov 14 22:18 pilotlog.txt
[2025-11-14 22:18:34] -rw------- 1 boinc boinc   2294453 Nov 14 22:18 log.47450870._001820.job.log.1
[2025-11-14 22:18:34] -rw------- 1 boinc boinc       353 Nov 14 22:18 output.list
[2025-11-14 22:18:34] -rw-r--r-- 1 boinc boinc       620 Nov 14 22:18 runtime_log
[2025-11-14 22:18:34] -rw------- 1 boinc boinc   4464640 Nov 14 22:18 result.tar.gz
[2025-11-14 22:18:34] -rw-r--r-- 1 boinc boinc      8765 Nov 14 22:18 runtime_log.err
[2025-11-14 22:18:34] -rw------- 1 boinc boinc       671 Nov 14 22:18 hmcMDmiQAe8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm5pJODmSjaZtn.diag
[2025-11-14 22:18:34] -rw-r--r-- 1 boinc boinc     21806 Nov 14 22:18 stderr.txt
[2025-11-14 22:18:34] HITS file was successfully produced:
[2025-11-14 22:18:34] -rw------- 1 boinc boinc 559036718 Nov 14 22:17 shared/HITS.pool.root.1
[2025-11-14 22:18:34]  *** Contents of shared directory: ***
[2025-11-14 22:18:34] total 918544
[2025-11-14 22:18:34] -rw-r--r-- 2 boinc boinc 376465112 Nov 14 17:37 ATLAS.root_0
[2025-11-14 22:18:34] -rw-r--r-- 2 boinc boinc     15120 Nov 14 17:37 start_atlas.sh
[2025-11-14 22:18:34] -rw-r--r-- 2 boinc boinc    590133 Nov 14 17:37 input.tar.gz
[2025-11-14 22:18:34] -rw------- 1 boinc boinc 559036718 Nov 14 22:17 HITS.pool.root.1
[2025-11-14 22:18:34] -rw------- 1 boinc boinc   4464640 Nov 14 22:18 result.tar.gz
22:18:35 (275431): run_atlas exited; CPU time 141322.684434
22:18:35 (275431): called boinc_finish(0)

</stderr_txt>
]]>

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