Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
16:46:18 (98358): wrapper (7.7.26015): starting
16:46:18 (98358): wrapper: running run_atlas (--nthreads 12)
[2025-11-14 16:46:18] Arguments: --nthreads 12
[2025-11-14 16:46:18] Threads: 12
[2025-11-14 16:46:18] Checking for CVMFS
[2025-11-14 16:46:18] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-14 16:46:19] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-14 16:46:19] Running cvmfs_config stat atlas.cern.ch
[2025-11-14 16:46:19] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-14 16:46:19] 2.13.3.0 9060 9265 268836 152860 0 332 30325294 46080000 18451 130560 0 41736722 99.842 25632434 29046 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://[2001:718:401:6025:1:0:2:0]:3128 1
[2025-11-14 16:46:19] CVMFS is ok
[2025-11-14 16:46:19] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-14 16:46:19] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-14 16:46:19] Further information can be found at the LHC@home message board.
[2025-11-14 16:46:19] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-14 16:46:19] Checking for apptainer binary...
[2025-11-14 16:46:19] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-14 16:46:19] Running /usr/bin/apptainer --version
[2025-11-14 16:46:19] apptainer version 1.4.3-1.el9
[2025-11-14 16:46:19] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-14 16:46:19] mff2104.farm.particle.cz
[2025-11-14 16:46:19] apptainer works
[2025-11-14 16:46:19] Set ATHENA_PROC_NUMBER=12
[2025-11-14 16:46:19] Set ATHENA_CORE_NUMBER=12
[2025-11-14 16:46:19] Starting ATLAS job with PandaID=6886205522
[2025-11-14 16:46:19] Running command: /usr/bin/apptainer exec -B /cvmfs,/scratch/.boinc/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-14 20:47:11]  *** The last 200 lines of the pilot log: ***
[2025-11-14 20:47:11] 2025-11-14 19:46:06,017 | INFO     | sum of deviations: -119334631967.43167
[2025-11-14 20:47:11] 2025-11-14 19:46:06,017 | INFO     | mean x: 1763142352.8760684
[2025-11-14 20:47:11] 2025-11-14 19:46:06,017 | INFO     | mean y: 3731123.2264957265
[2025-11-14 20:47:11] 2025-11-14 19:46:06,017 | INFO     | intersect: 52959754887.441444
[2025-11-14 20:47:11] 2025-11-14 19:46:06,017 | INFO     | chi2: 16.26772443804933
[2025-11-14 20:47:11] 2025-11-14 19:46:06,017 | INFO     | sum of square deviations: 3724001549.2314386
[2025-11-14 20:47:11] 2025-11-14 19:46:06,019 | INFO     | sum of deviations: -7639522503.20097
[2025-11-14 20:47:11] 2025-11-14 19:46:06,019 | INFO     | mean x: 1763142200.4061136
[2025-11-14 20:47:11] 2025-11-14 19:46:06,019 | INFO     | mean y: 3799527.572052402
[2025-11-14 20:47:11] 2025-11-14 19:46:06,019 | INFO     | intersect: 3620759493.425352
[2025-11-14 20:47:11] 2025-11-14 19:46:06,019 | INFO     | chi2: 11.624409978865897
[2025-11-14 20:47:11] 2025-11-14 19:46:06,019 | INFO     | current chi2=11.624409978865897 (change=28.543109866816852 %)
[2025-11-14 20:47:11] 2025-11-14 19:46:06,020 | INFO     | sum of square deviations: 3485472019.125
[2025-11-14 20:47:11] 2025-11-14 19:46:06,021 | INFO     | sum of deviations: 108081157679.8125
[2025-11-14 20:47:11] 2025-11-14 19:46:06,021 | INFO     | mean x: 1763142047.9375
[2025-11-14 20:47:11] 2025-11-14 19:46:06,021 | INFO     | mean y: 3873492.84375
[2025-11-14 20:47:11] 2025-11-14 19:46:06,021 | INFO     | intersect: -54669477103.406235
[2025-11-14 20:47:11] 2025-11-14 19:46:06,021 | INFO     | chi2: 7.073746756344399
[2025-11-14 20:47:11] 2025-11-14 19:46:06,021 | INFO     | current chi2=7.073746756344399 (change=39.1474769970688 %)
[2025-11-14 20:47:11] 2025-11-14 19:46:06,022 | INFO     | sum of square deviations: 3257361288.5570774
[2025-11-14 20:47:11] 2025-11-14 19:46:06,023 | INFO     | sum of deviations: 216500033887.76254
[2025-11-14 20:47:11] 2025-11-14 19:46:06,023 | INFO     | mean x: 1763141895.4703197
[2025-11-14 20:47:11] 2025-11-14 19:46:06,023 | INFO     | mean y: 3945786.9634703198
[2025-11-14 20:47:11] 2025-11-14 19:46:06,023 | INFO     | intersect: -117183018231.80211
[2025-11-14 20:47:11] 2025-11-14 19:46:06,024 | INFO     | chi2: 3.213002972403092
[2025-11-14 20:47:11] 2025-11-14 19:46:06,024 | INFO     | current chi2=3.213002972403092 (change=54.57848459840085 %)
[2025-11-14 20:47:11] 2025-11-14 19:46:06,024 | INFO     | sum of square deviations: 3039343413.831777
[2025-11-14 20:47:11] 2025-11-14 19:46:06,025 | INFO     | sum of deviations: 214780550578.81308
[2025-11-14 20:47:11] 2025-11-14 19:46:06,025 | INFO     | mean x: 1763141742.9719627
[2025-11-14 20:47:11] 2025-11-14 19:46:06,025 | INFO     | mean y: 3944503.6355140186
[2025-11-14 20:47:11] 2025-11-14 19:46:06,025 | INFO     | intersect: -124591569310.50899
[2025-11-14 20:47:11] 2025-11-14 19:46:06,026 | INFO     | chi2: 3.166765951911639
[2025-11-14 20:47:11] 2025-11-14 19:46:06,026 | INFO     | current chi2=3.166765951911639 (change=1.4390593749395488 %)
[2025-11-14 20:47:11] 2025-11-14 19:46:06,026 | INFO     | right removable region: 213
[2025-11-14 20:47:11] 2025-11-14 19:46:06,026 | INFO     | sum of square deviations: 3723805129.2314386
[2025-11-14 20:47:11] 2025-11-14 19:46:06,027 | INFO     | sum of deviations: -219951867382.65063
[2025-11-14 20:47:11] 2025-11-14 19:46:06,027 | INFO     | mean x: 1763142505.4061136
[2025-11-14 20:47:11] 2025-11-14 19:46:06,027 | INFO     | mean y: 3792512.1790393014
[2025-11-14 20:47:11] 2025-11-14 19:46:06,027 | INFO     | intersect: 104146322281.40997
[2025-11-14 20:47:11] 2025-11-14 19:46:06,028 | INFO     | chi2: 13.545850932799791
[2025-11-14 20:47:11] 2025-11-14 19:46:06,028 | INFO     | current chi2=13.545850932799791 (change=16.73174091198167 %)
[2025-11-14 20:47:11] 2025-11-14 19:46:06,028 | INFO     | left removable region: 10
[2025-11-14 20:47:11] 2025-11-14 19:46:06,028 | INFO     | sum of square deviations: 2594281514.7192063
[2025-11-14 20:47:11] 2025-11-14 19:46:06,029 | INFO     | sum of deviations: 96585904330.75864
[2025-11-14 20:47:11] 2025-11-14 19:46:06,029 | INFO     | mean x: 1763142017.5123153
[2025-11-14 20:47:11] 2025-11-14 19:46:06,029 | INFO     | mean y: 4029703.896551724
[2025-11-14 20:47:11] 2025-11-14 19:46:06,029 | INFO     | intersect: -65638293713.50528
[2025-11-14 20:47:11] 2025-11-14 19:46:06,030 | INFO     | chi2: 0.015564265675306043
[2025-11-14 20:47:11] 2025-11-14 19:46:06,030 | INFO     | current memory leak: 37.23 B/s (using 203 data points, chi2=0.02)
[2025-11-14 20:47:11] 2025-11-14 19:46:06,030 | INFO     | could have reported an average CPU frequency of 2774 MHz (11 samples)
[2025-11-14 20:47:11] 2025-11-14 19:46:06,031 | INFO     | ..............................
[2025-11-14 20:47:11] 2025-11-14 19:46:06,031 | INFO     | . Timing measurements:
[2025-11-14 20:47:11] 2025-11-14 19:46:06,031 | INFO     | . get job = 0 s
[2025-11-14 20:47:11] 2025-11-14 19:46:06,031 | INFO     | . initial setup = 2 s
[2025-11-14 20:47:11] 2025-11-14 19:46:06,031 | INFO     | . payload setup = 18 s
[2025-11-14 20:47:11] 2025-11-14 19:46:06,031 | INFO     | . stage-in = 0 s
[2025-11-14 20:47:11] 2025-11-14 19:46:06,031 | INFO     | . payload execution = 14275 s
[2025-11-14 20:47:11] 2025-11-14 19:46:06,031 | INFO     | . stage-out = 3 s
[2025-11-14 20:47:11] 2025-11-14 19:46:06,031 | INFO     | . log creation = 1 s
[2025-11-14 20:47:11] 2025-11-14 19:46:06,031 | INFO     | ..............................
[2025-11-14 20:47:11] 2025-11-14 19:46:06,140 | INFO     | 
[2025-11-14 20:47:11] 2025-11-14 19:46:06,140 | INFO     | job summary report
[2025-11-14 20:47:11] 2025-11-14 19:46:06,141 | INFO     | --------------------------------------------------
[2025-11-14 20:47:11] 2025-11-14 19:46:06,141 | INFO     | PanDA job id: 6886205522
[2025-11-14 20:47:11] 2025-11-14 19:46:06,141 | INFO     | task id: 47450870
[2025-11-14 20:47:11] 2025-11-14 19:46:06,141 | INFO     | errors: (none)
[2025-11-14 20:47:11] 2025-11-14 19:46:06,141 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-14 20:47:11] 2025-11-14 19:46:06,141 | INFO     | pilot state: finished 
[2025-11-14 20:47:11] 2025-11-14 19:46:06,141 | INFO     | transexitcode: 0
[2025-11-14 20:47:11] 2025-11-14 19:46:06,141 | INFO     | exeerrorcode: 0
[2025-11-14 20:47:11] 2025-11-14 19:46:06,141 | INFO     | exeerrordiag: 
[2025-11-14 20:47:11] 2025-11-14 19:46:06,141 | INFO     | exitcode: 0
[2025-11-14 20:47:11] 2025-11-14 19:46:06,141 | INFO     | exitmsg: OK
[2025-11-14 20:47:11] 2025-11-14 19:46:06,141 | INFO     | cpuconsumptiontime: 143112 s
[2025-11-14 20:47:11] 2025-11-14 19:46:06,142 | INFO     | nevents: 1000
[2025-11-14 20:47:11] 2025-11-14 19:46:06,142 | INFO     | neventsw: 0
[2025-11-14 20:47:11] 2025-11-14 19:46:06,142 | INFO     | pid: 136428
[2025-11-14 20:47:11] 2025-11-14 19:46:06,142 | INFO     | pgrp: 136428
[2025-11-14 20:47:11] 2025-11-14 19:46:06,142 | INFO     | corecount: 12
[2025-11-14 20:47:11] 2025-11-14 19:46:06,142 | INFO     | event service: False
[2025-11-14 20:47:11] 2025-11-14 19:46:06,142 | INFO     | sizes: {0: 2298839, 8: 2299101, 11: 2299129, 14298: 2348700, 14299: 2348699, 14303: 2357751, 14306: 2357935, 14350: 2358181}
[2025-11-14 20:47:11] 2025-11-14 19:46:06,142 | INFO     | --------------------------------------------------
[2025-11-14 20:47:11] 2025-11-14 19:46:06,142 | INFO     | 
[2025-11-14 20:47:11] 2025-11-14 19:46:06,142 | INFO     | executing command: ls -lF /scratch/.boinc/slots/1
[2025-11-14 20:47:11] 2025-11-14 19:46:06,167 | INFO     | time since job start (14369s) is within the limit (172800.0s)
[2025-11-14 20:47:11] 2025-11-14 19:46:06,301 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-14 20:47:11] 2025-11-14 19:46:06,302 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-14 20:47:11] 2025-11-14 19:46:06,303 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-14 20:47:11] 2025-11-14 19:46:06,303 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-14 20:47:11] 2025-11-14 19:46:06,303 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-14 20:47:11] 2025-11-14 19:46:06,303 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-14 20:47:11] 2025-11-14 19:46:06,303 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-14 20:47:11] 2025-11-14 19:46:06,303 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-14 20:47:11] 2025-11-14 19:46:06,303 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-14 20:47:11] 2025-11-14 19:46:06,303 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-14 20:47:11] 2025-11-14 19:46:06,303 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-14 20:47:11] 2025-11-14 19:46:06,303 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-14 20:47:11] 2025-11-14 19:46:06,304 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-14 20:47:11] 2025-11-14 19:46:06,304 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-14 20:47:11] 2025-11-14 19:46:06,305 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-14 20:47:11] 2025-11-14 19:46:06,305 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-14 20:47:11] 2025-11-14 19:46:06,305 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-14 20:47:11] 2025-11-14 19:46:06,305 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-14 20:47:11] 2025-11-14 19:46:06,305 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-14 20:47:11] 2025-11-14 19:46:06,305 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-14 20:47:11] 2025-11-14 19:46:06,306 | INFO     | job 6886205522 has completed (purged errors)
[2025-11-14 20:47:11] 2025-11-14 19:46:06,306 | INFO     | overall cleanup function is called
[2025-11-14 20:47:11] 2025-11-14 19:46:07,352 | INFO     | --- collectZombieJob: --- 10, [136428]
[2025-11-14 20:47:11] 2025-11-14 19:46:07,352 | INFO     | zombie collector waiting for pid 136428
[2025-11-14 20:47:11] 2025-11-14 19:46:07,353 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-14 20:47:11] 2025-11-14 19:46:07,353 | INFO     | collected zombie processes
[2025-11-14 20:47:11] 2025-11-14 19:46:07,354 | INFO     | will attempt to kill all subprocesses of pid=136428
[2025-11-14 20:47:11] 2025-11-14 19:46:08,327 | INFO     | process IDs to be killed: [136428] (in reverse order)
[2025-11-14 20:47:11] 2025-11-14 19:46:08,796 | WARNING  | found no corresponding commands to process id(s)
[2025-11-14 20:47:11] 2025-11-14 19:46:08,796 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-14 20:47:11] 2025-11-14 19:46:08,854 | INFO     | did not find any defunct processes belonging to 136428
[2025-11-14 20:47:11] 2025-11-14 19:46:08,902 | INFO     | did not find any defunct processes belonging to 136428
[2025-11-14 20:47:11] 2025-11-14 19:46:08,915 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-14 20:47:11] 2025-11-14 19:46:08,915 | INFO     | ready for new job
[2025-11-14 20:47:11] 2025-11-14 19:46:08,916 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-14 20:47:11] 2025-11-14 19:46:08,918 | INFO     | ***************************************
[2025-11-14 20:47:11] 2025-11-14 19:46:08,918 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-14 20:47:11] 2025-11-14 19:46:08,918 | INFO     | ***************************************
[2025-11-14 20:47:11] 2025-11-14 19:46:08,918 | INFO     | 
[2025-11-14 20:47:11] 2025-11-14 19:46:08,929 | INFO     | architecture information:
[2025-11-14 20:47:11] 2025-11-14 19:46:08,933 | INFO     | executing command: cat /etc/os-release
[2025-11-14 20:47:11] 2025-11-14 19:46:08,987 | INFO     | cat /etc/os-release:
[2025-11-14 20:47:11] NAME="CentOS Linux"
[2025-11-14 20:47:11] VERSION="7 (Core)"
[2025-11-14 20:47:11] ID="centos"
[2025-11-14 20:47:11] ID_LIKE="rhel fedora"
[2025-11-14 20:47:11] VERSION_ID="7"
[2025-11-14 20:47:11] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-14 20:47:11] ANSI_COLOR="0;31"
[2025-11-14 20:47:11] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-14 20:47:11] HOME_URL="https://www.centos.org/"
[2025-11-14 20:47:11] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-14 20:47:11] 
[2025-11-14 20:47:11] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-14 20:47:11] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-14 20:47:11] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-14 20:47:11] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-14 20:47:11] 
[2025-11-14 20:47:11] 2025-11-14 19:46:08,987 | INFO     | ***************************************
[2025-11-14 20:47:11] 2025-11-14 19:46:09,491 | INFO     | executing command: df -mP /scratch/.boinc/slots/1
[2025-11-14 20:47:11] 2025-11-14 19:46:09,579 | INFO     | sufficient remaining disk space (1560070324224 B)
[2025-11-14 20:47:11] 2025-11-14 19:46:09,579 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-14 20:47:11] 2025-11-14 19:46:09,579 | INFO     | current server update state: UPDATING_FINAL
[2025-11-14 20:47:11] 2025-11-14 19:46:09,579 | INFO     | update_server=False
[2025-11-14 20:47:11] 2025-11-14 19:46:09,579 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-14 20:47:11] 2025-11-14 19:46:09,580 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-14 20:47:11] 2025-11-14 19:46:09,606 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-14 20:47:11] 2025-11-14 19:46:09,606 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-14 20:47:11] 2025-11-14 19:46:09,607 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-14 20:47:11] 2025-11-14 19:46:09,607 | INFO     | will abort loop
[2025-11-14 20:47:11] 2025-11-14 19:46:09,964 | INFO     | all payload control threads have been joined
[2025-11-14 20:47:11] 2025-11-14 19:46:10,447 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-14 20:47:11] 2025-11-14 19:46:10,544 | INFO     | all data control threads have been joined
[2025-11-14 20:47:11] 2025-11-14 19:46:10,585 | INFO     | [job] retrieve thread has finished
[2025-11-14 20:47:11] 2025-11-14 19:46:10,612 | INFO     | [job] job monitor thread has finished
[2025-11-14 20:47:11] 2025-11-14 19:46:10,645 | INFO     | [payload] failed_post thread has finished
[2025-11-14 20:47:11] 2025-11-14 19:46:10,694 | INFO     | [data] copytool_in thread has finished
[2025-11-14 20:47:11] 2025-11-14 19:46:10,740 | INFO     | all job control threads have been joined
[2025-11-14 20:47:11] 2025-11-14 19:46:10,755 | INFO     | [payload] validate_pre thread has finished
[2025-11-14 20:47:11] 2025-11-14 19:46:10,759 | INFO     | [payload] validate_post thread has finished
[2025-11-14 20:47:11] 2025-11-14 19:46:10,970 | INFO     | [payload] control thread has finished
[2025-11-14 20:47:11] 2025-11-14 19:46:11,152 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-14 20:47:11] 2025-11-14 19:46:11,179 | INFO     | [job] validate thread has finished
[2025-11-14 20:47:11] 2025-11-14 19:46:11,342 | INFO     | [job] create_data_payload thread has finished
[2025-11-14 20:47:11] 2025-11-14 19:46:11,550 | INFO     | [data] control thread has finished
[2025-11-14 20:47:11] 2025-11-14 19:46:11,589 | INFO     | [payload] execute_payloads thread has finished
[2025-11-14 20:47:11] 2025-11-14 19:46:11,617 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-14 20:47:11] 2025-11-14 19:46:11,747 | INFO     | [job] control thread has finished
[2025-11-14 20:47:11] 2025-11-14 19:46:12,158 | INFO     | [job] queue monitor thread has finished
[2025-11-14 20:47:11] 2025-11-14 19:46:12,455 | INFO     | [data] copytool_out thread has finished
[2025-11-14 20:47:11] 2025-11-14 19:46:13,591 | INFO     | [data] queue_monitor thread has finished
[2025-11-14 20:47:11] 2025-11-14 19:46:37,034 [wrapper] supervise_pilot (15 min periods counter: 17)
[2025-11-14 20:47:11] 2025-11-14 19:46:40,515 | INFO     | PID=110547 has CPU usage=4.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-11-14 20:47:11] 2025-11-14 19:46:40,515 | INFO     | .. there are 59 such processes running
[2025-11-14 20:47:11] 2025-11-14 19:46:40,520 | INFO     | found 0 job(s) in 20 queues
[2025-11-14 20:47:11] 2025-11-14 19:46:40,520 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-14 20:47:11] 2025-11-14 19:46:40,520 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-14 20:47:11] 2025-11-14 19:47:01,726 | INFO     | [monitor] cgroup control has ended
[2025-11-14 20:47:11] 2025-11-14 19:47:03,121 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139857161271104)>', '<ExcThread(monitor, started 139856516724480)>']
[2025-11-14 20:47:11] 2025-11-14 19:47:03,662 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-14 20:47:11] 2025-11-14 19:47:03,665 | INFO     | [monitor] control thread has ended
[2025-11-14 20:47:11] 2025-11-14 19:47:08,147 | INFO     | all workflow threads have been joined
[2025-11-14 20:47:11] 2025-11-14 19:47:08,147 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-14 20:47:11] 2025-11-14 19:47:08,148 | INFO     | traces error code: 0
[2025-11-14 20:47:11] 2025-11-14 19:47:08,148 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-14 20:47:11] 2025-11-14 19:47:08,610 [wrapper] ==== pilot stdout END ====
[2025-11-14 20:47:11] 2025-11-14 19:47:08,649 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-14 20:47:11] 2025-11-14 19:47:08,692 [wrapper] pilotpid: 110547
[2025-11-14 20:47:11] 2025-11-14 19:47:08,741 [wrapper] Pilot exit status: 0
[2025-11-14 20:47:11] 2025-11-14 19:47:08,904 [wrapper] pandaids: 6886205522
[2025-11-14 20:47:11] 2025-11-14 19:47:09,471 [wrapper] cleanup supervisor_pilot  864723 110549
[2025-11-14 20:47:11] 2025-11-14 19:47:09,514 [wrapper] Test setup, not cleaning
[2025-11-14 20:47:11] 2025-11-14 19:47:09,548 [wrapper] apfmon messages muted
[2025-11-14 20:47:11] 2025-11-14 19:47:09,597 [wrapper] ==== wrapper stdout END ====
[2025-11-14 20:47:11] 2025-11-14 19:47:09,636 [wrapper] ==== wrapper stderr END ====
[2025-11-14 20:47:11]  *** Error codes and diagnostics ***
[2025-11-14 20:47:11]     "exeErrorCode": 0,
[2025-11-14 20:47:11]     "exeErrorDiag": "",
[2025-11-14 20:47:11]     "pilotErrorCode": 0,
[2025-11-14 20:47:11]     "pilotErrorDiag": "",
[2025-11-14 20:47:11]  *** Listing of results directory ***
[2025-11-14 20:47:11] total 920220
[2025-11-14 20:47:11] -rw-r--r-- 1 boinc boinc    576529 Nov 14 15:59 pilot3.tar.gz
[2025-11-14 20:47:11] -rwx------ 1 boinc boinc     36292 Nov 14 16:00 runpilot2-wrapper.sh
[2025-11-14 20:47:11] -rw-r--r-- 1 boinc boinc      5112 Nov 14 16:00 queuedata.json
[2025-11-14 20:47:11] -rw-r--r-- 1 boinc boinc       100 Nov 14 16:46 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-14 20:47:11] -rwxr-xr-x 1 boinc boinc      7986 Nov 14 16:46 run_atlas
[2025-11-14 20:47:11] -rw-r--r-- 1 boinc boinc       105 Nov 14 16:46 job.xml
[2025-11-14 20:47:11] -rw-r--r-- 1 boinc boinc      6663 Nov 14 16:46 init_data.xml
[2025-11-14 20:47:11] -rw-r--r-- 2 boinc boinc 380929380 Nov 14 16:46 EVNT.14545720._000239.pool.root.1
[2025-11-14 20:47:11] -rw-r--r-- 2 boinc boinc     15120 Nov 14 16:46 start_atlas.sh
[2025-11-14 20:47:11] drwxrwx--x 2 boinc boinc      4096 Nov 14 16:46 shared
[2025-11-14 20:47:11] -rw-r--r-- 2 boinc boinc    590117 Nov 14 16:46 input.tar.gz
[2025-11-14 20:47:11] -rw-r--r-- 1 boinc boinc         0 Nov 14 16:46 boinc_lockfile
[2025-11-14 20:47:11] -rw-r--r-- 1 boinc boinc      2927 Nov 14 16:46 pandaJob.out
[2025-11-14 20:47:11] -rw------- 1 boinc boinc    988602 Nov 14 16:46 agis_schedconf.cvmfs.json
[2025-11-14 20:47:11] drwx------ 5 boinc boinc      4096 Nov 14 16:46 pilot3
[2025-11-14 20:47:11] -rw-r--r-- 1 boinc boinc       532 Nov 14 20:27 boinc_task_state.xml
[2025-11-14 20:47:11] -rw------- 1 boinc boinc 549314696 Nov 14 20:44 HITS.47450870._002201.pool.root.1
[2025-11-14 20:47:11] -rw------- 1 boinc boinc      1033 Nov 14 20:45 memory_monitor_summary.json
[2025-11-14 20:47:11] -rw------- 1 boinc boinc   1526297 Nov 14 20:45 agis_ddmendpoints.agis.ALL.json
[2025-11-14 20:47:11] -rw------- 1 boinc boinc   2088499 Nov 14 20:45 log.47450870._002201.job.log.tgz.1
[2025-11-14 20:47:11] -rw------- 1 boinc boinc     26616 Nov 14 20:46 heartbeat.json
[2025-11-14 20:47:11] -rw------- 1 boinc boinc        95 Nov 14 20:46 pilot_heartbeat.json
[2025-11-14 20:47:11] -rw------- 1 boinc boinc      5012 Nov 14 20:47 pilotlog.txt
[2025-11-14 20:47:11] -rw------- 1 boinc boinc   1963116 Nov 14 20:47 log.47450870._002201.job.log.1
[2025-11-14 20:47:11] -rw------- 1 boinc boinc       353 Nov 14 20:47 output.list
[2025-11-14 20:47:11] -rw-r--r-- 1 boinc boinc       620 Nov 14 20:47 runtime_log
[2025-11-14 20:47:11] -rw------- 1 boinc boinc   4085760 Nov 14 20:47 result.tar.gz
[2025-11-14 20:47:11] -rw------- 1 boinc boinc       672 Nov 14 20:47 wqqLDmeSAe8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmrsJODmVknD7m.diag
[2025-11-14 20:47:11] -rw-r--r-- 1 boinc boinc      8765 Nov 14 20:47 runtime_log.err
[2025-11-14 20:47:11] -rw-r--r-- 1 boinc boinc        28 Nov 14 20:47 wrapper_checkpoint.txt
[2025-11-14 20:47:11] -rw-r--r-- 1 boinc boinc      8192 Nov 14 20:47 boinc_mmap_file
[2025-11-14 20:47:11] -rw-r--r-- 1 boinc boinc     21195 Nov 14 20:47 stderr.txt
[2025-11-14 20:47:11] HITS file was successfully produced:
[2025-11-14 20:47:12] -rw------- 1 boinc boinc 549314696 Nov 14 20:44 shared/HITS.pool.root.1
[2025-11-14 20:47:12]  *** Contents of shared directory: ***
[2025-11-14 20:47:12] total 913044
[2025-11-14 20:47:12] -rw-r--r-- 2 boinc boinc 380929380 Nov 14 16:46 ATLAS.root_0
[2025-11-14 20:47:12] -rw-r--r-- 2 boinc boinc     15120 Nov 14 16:46 start_atlas.sh
[2025-11-14 20:47:12] -rw-r--r-- 2 boinc boinc    590117 Nov 14 16:46 input.tar.gz
[2025-11-14 20:47:12] -rw------- 1 boinc boinc 549314696 Nov 14 20:44 HITS.pool.root.1
[2025-11-14 20:47:12] -rw------- 1 boinc boinc   4085760 Nov 14 20:47 result.tar.gz
20:47:13 (98358): run_atlas exited; CPU time 143218.669705
20:47:13 (98358): called boinc_finish(0)

</stderr_txt>
]]>

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