Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
16:46:19 (98851): wrapper (7.7.26015): starting
16:46:19 (98851): wrapper: running run_atlas (--nthreads 12)
[2025-11-14 16:46:19] Arguments: --nthreads 12
[2025-11-14 16:46:19] Threads: 12
[2025-11-14 16:46:19] Checking for CVMFS
[2025-11-14 16:46:20] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-14 16:46:20] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-14 16:46:20] Running cvmfs_config stat atlas.cern.ch
[2025-11-14 16:46:20] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-14 16:46:20] 2.13.3.0 9060 9265 268836 152860 0 332 30325294 46080000 18497 130560 0 41738174 99.842 25632434 29046 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://[2001:718:401:6025:1:0:2:0]:3128 1
[2025-11-14 16:46:20] CVMFS is ok
[2025-11-14 16:46:20] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-14 16:46:20] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-14 16:46:20] Further information can be found at the LHC@home message board.
[2025-11-14 16:46:20] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-14 16:46:20] Checking for apptainer binary...
[2025-11-14 16:46:20] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-14 16:46:20] Running /usr/bin/apptainer --version
[2025-11-14 16:46:20] apptainer version 1.4.3-1.el9
[2025-11-14 16:46:20] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-14 16:46:20] mff2104.farm.particle.cz
[2025-11-14 16:46:20] apptainer works
[2025-11-14 16:46:20] Set ATHENA_PROC_NUMBER=12
[2025-11-14 16:46:20] Set ATHENA_CORE_NUMBER=12
[2025-11-14 16:46:20] Starting ATLAS job with PandaID=6886206117
[2025-11-14 16:46:20] Running command: /usr/bin/apptainer exec -B /cvmfs,/scratch/.boinc/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-14 21:28:21]  *** The last 200 lines of the pilot log: ***
[2025-11-14 21:28:21] 2025-11-14 20:27:11,004 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-14 21:28:21] 2025-11-14 20:27:11,010 | INFO     | fitting pss+swap vs Time
[2025-11-14 21:28:21] 2025-11-14 20:27:11,011 | INFO     | sum of square deviations: 6448715978.16723
[2025-11-14 21:28:21] 2025-11-14 20:27:11,019 | INFO     | sum of deviations: -84207253852.96713
[2025-11-14 21:28:21] 2025-11-14 20:27:11,019 | INFO     | mean x: 1763143603.189091
[2025-11-14 21:28:21] 2025-11-14 20:27:11,019 | INFO     | mean y: 3823313.210909091
[2025-11-14 21:28:21] 2025-11-14 20:27:11,020 | INFO     | intersect: 23026930777.648354
[2025-11-14 21:28:21] 2025-11-14 20:27:11,020 | INFO     | chi2: 14.028018053696902
[2025-11-14 21:28:21] 2025-11-14 20:27:11,020 | INFO     | sum of square deviations: 6103423183.466704
[2025-11-14 21:28:21] 2025-11-14 20:27:11,022 | INFO     | sum of deviations: 54187299389.19998
[2025-11-14 21:28:21] 2025-11-14 20:27:11,023 | INFO     | mean x: 1763143450.711111
[2025-11-14 21:28:21] 2025-11-14 20:27:11,023 | INFO     | mean y: 3884479.066666667
[2025-11-14 21:28:21] 2025-11-14 20:27:11,023 | INFO     | intersect: -15649623258.786772
[2025-11-14 21:28:21] 2025-11-14 20:27:11,023 | INFO     | chi2: 9.472189959287796
[2025-11-14 21:28:21] 2025-11-14 20:27:11,023 | INFO     | current chi2=9.472189959287796 (change=32.47663409734832 %)
[2025-11-14 21:28:21] 2025-11-14 20:27:11,023 | INFO     | sum of square deviations: 5770688763.494366
[2025-11-14 21:28:21] 2025-11-14 20:27:11,025 | INFO     | sum of deviations: 197262005227.33563
[2025-11-14 21:28:21] 2025-11-14 20:27:11,031 | INFO     | mean x: 1763143298.2339623
[2025-11-14 21:28:21] 2025-11-14 20:27:11,031 | INFO     | mean y: 3950049.7849056604
[2025-11-14 21:28:21] 2025-11-14 20:27:11,031 | INFO     | intersect: -60266356800.40869
[2025-11-14 21:28:21] 2025-11-14 20:27:11,032 | INFO     | chi2: 5.051347546921266
[2025-11-14 21:28:21] 2025-11-14 20:27:11,032 | INFO     | current chi2=5.051347546921266 (change=46.671809068099904 %)
[2025-11-14 21:28:21] 2025-11-14 20:27:11,032 | INFO     | sum of square deviations: 5450280155.734605
[2025-11-14 21:28:21] 2025-11-14 20:27:11,035 | INFO     | sum of deviations: 282790853178.11163
[2025-11-14 21:28:21] 2025-11-14 20:27:11,035 | INFO     | mean x: 1763143145.7576923
[2025-11-14 21:28:21] 2025-11-14 20:27:11,035 | INFO     | mean y: 3990596.3192307693
[2025-11-14 21:28:21] 2025-11-14 20:27:11,035 | INFO     | intersect: -91477683779.5101
[2025-11-14 21:28:21] 2025-11-14 20:27:11,036 | INFO     | chi2: 3.2001331115015077
[2025-11-14 21:28:21] 2025-11-14 20:27:11,036 | INFO     | current chi2=3.2001331115015077 (change=36.64793242246915 %)
[2025-11-14 21:28:21] 2025-11-14 20:27:11,036 | INFO     | sum of square deviations: 5141885505.396087
[2025-11-14 21:28:21] 2025-11-14 20:27:11,039 | INFO     | sum of deviations: 276202325725.24304
[2025-11-14 21:28:21] 2025-11-14 20:27:11,039 | INFO     | mean x: 1763142993.2627451
[2025-11-14 21:28:21] 2025-11-14 20:27:11,039 | INFO     | mean y: 3987315.3098039217
[2025-11-14 21:28:21] 2025-11-14 20:27:11,039 | INFO     | intersect: -94705277372.5712
[2025-11-14 21:28:21] 2025-11-14 20:27:11,039 | INFO     | chi2: 3.1883342452956644
[2025-11-14 21:28:21] 2025-11-14 20:27:11,039 | INFO     | current chi2=3.1883342452956644 (change=0.368699232023733 %)
[2025-11-14 21:28:21] 2025-11-14 20:27:11,040 | INFO     | right removable region: 254
[2025-11-14 21:28:21] 2025-11-14 20:27:11,040 | INFO     | sum of square deviations: 6103223713.466704
[2025-11-14 21:28:21] 2025-11-14 20:27:11,044 | INFO     | sum of deviations: -206126548155.88898
[2025-11-14 21:28:21] 2025-11-14 20:27:11,044 | INFO     | mean x: 1763143755.711111
[2025-11-14 21:28:21] 2025-11-14 20:27:11,044 | INFO     | mean y: 3877025.6296296297
[2025-11-14 21:28:21] 2025-11-14 20:27:11,044 | INFO     | intersect: 59551216813.52482
[2025-11-14 21:28:21] 2025-11-14 20:27:11,045 | INFO     | chi2: 11.208734903054284
[2025-11-14 21:28:21] 2025-11-14 20:27:11,045 | INFO     | current chi2=11.208734903054284 (change=20.097515841873566 %)
[2025-11-14 21:28:21] 2025-11-14 20:27:11,045 | INFO     | left removable region: 10
[2025-11-14 21:28:21] 2025-11-14 20:27:11,045 | INFO     | sum of square deviations: 4504678703.754066
[2025-11-14 21:28:21] 2025-11-14 20:27:11,047 | INFO     | sum of deviations: 132572443035.68042
[2025-11-14 21:28:21] 2025-11-14 20:27:11,047 | INFO     | mean x: 1763143267.7950819
[2025-11-14 21:28:21] 2025-11-14 20:27:11,047 | INFO     | mean y: 4060163.7336065574
[2025-11-14 21:28:21] 2025-11-14 20:27:11,047 | INFO     | intersect: -51885147880.94034
[2025-11-14 21:28:21] 2025-11-14 20:27:11,048 | INFO     | chi2: 0.03225233248571018
[2025-11-14 21:28:21] 2025-11-14 20:27:11,048 | INFO     | current memory leak: 29.43 B/s (using 244 data points, chi2=0.03)
[2025-11-14 21:28:21] 2025-11-14 20:27:11,052 | INFO     | could have reported an average CPU frequency of 2768 MHz (13 samples)
[2025-11-14 21:28:21] 2025-11-14 20:27:11,052 | INFO     | ..............................
[2025-11-14 21:28:21] 2025-11-14 20:27:11,052 | INFO     | . Timing measurements:
[2025-11-14 21:28:21] 2025-11-14 20:27:11,053 | INFO     | . get job = 0 s
[2025-11-14 21:28:21] 2025-11-14 20:27:11,053 | INFO     | . initial setup = 2 s
[2025-11-14 21:28:21] 2025-11-14 20:27:11,053 | INFO     | . payload setup = 18 s
[2025-11-14 21:28:21] 2025-11-14 20:27:11,053 | INFO     | . stage-in = 0 s
[2025-11-14 21:28:21] 2025-11-14 20:27:11,053 | INFO     | . payload execution = 16748 s
[2025-11-14 21:28:21] 2025-11-14 20:27:11,053 | INFO     | . stage-out = 3 s
[2025-11-14 21:28:21] 2025-11-14 20:27:11,053 | INFO     | . log creation = 1 s
[2025-11-14 21:28:21] 2025-11-14 20:27:11,053 | INFO     | ..............................
[2025-11-14 21:28:21] 2025-11-14 20:27:11,191 | INFO     | 
[2025-11-14 21:28:21] 2025-11-14 20:27:11,192 | INFO     | job summary report
[2025-11-14 21:28:21] 2025-11-14 20:27:11,192 | INFO     | --------------------------------------------------
[2025-11-14 21:28:21] 2025-11-14 20:27:11,192 | INFO     | PanDA job id: 6886206117
[2025-11-14 21:28:21] 2025-11-14 20:27:11,192 | INFO     | task id: 47450870
[2025-11-14 21:28:21] 2025-11-14 20:27:11,192 | INFO     | errors: (none)
[2025-11-14 21:28:21] 2025-11-14 20:27:11,192 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-14 21:28:21] 2025-11-14 20:27:11,192 | INFO     | pilot state: finished 
[2025-11-14 21:28:21] 2025-11-14 20:27:11,192 | INFO     | transexitcode: 0
[2025-11-14 21:28:21] 2025-11-14 20:27:11,192 | INFO     | exeerrorcode: 0
[2025-11-14 21:28:21] 2025-11-14 20:27:11,192 | INFO     | exeerrordiag: 
[2025-11-14 21:28:21] 2025-11-14 20:27:11,192 | INFO     | exitcode: 0
[2025-11-14 21:28:21] 2025-11-14 20:27:11,192 | INFO     | exitmsg: OK
[2025-11-14 21:28:21] 2025-11-14 20:27:11,193 | INFO     | cpuconsumptiontime: 152451 s
[2025-11-14 21:28:21] 2025-11-14 20:27:11,193 | INFO     | nevents: 1000
[2025-11-14 21:28:21] 2025-11-14 20:27:11,193 | INFO     | neventsw: 0
[2025-11-14 21:28:21] 2025-11-14 20:27:11,193 | INFO     | pid: 136423
[2025-11-14 21:28:21] 2025-11-14 20:27:11,193 | INFO     | pgrp: 136423
[2025-11-14 21:28:21] 2025-11-14 20:27:11,193 | INFO     | corecount: 12
[2025-11-14 21:28:21] 2025-11-14 20:27:11,193 | INFO     | event service: False
[2025-11-14 21:28:21] 2025-11-14 20:27:11,193 | INFO     | sizes: {0: 2298845, 8: 2299107, 11: 2299135, 16771: 2350295, 16774: 2359291, 16778: 2359347, 16815: 2359721}
[2025-11-14 21:28:21] 2025-11-14 20:27:11,193 | INFO     | --------------------------------------------------
[2025-11-14 21:28:21] 2025-11-14 20:27:11,193 | INFO     | 
[2025-11-14 21:28:21] 2025-11-14 20:27:11,193 | INFO     | executing command: ls -lF /scratch/.boinc/slots/2
[2025-11-14 21:28:21] 2025-11-14 20:27:11,380 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-14 21:28:21] 2025-11-14 20:27:11,380 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-14 21:28:21] 2025-11-14 20:27:11,380 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-14 21:28:21] 2025-11-14 20:27:11,381 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-14 21:28:21] 2025-11-14 20:27:11,381 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-14 21:28:21] 2025-11-14 20:27:11,381 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-14 21:28:21] 2025-11-14 20:27:11,381 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-14 21:28:21] 2025-11-14 20:27:11,381 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-14 21:28:21] 2025-11-14 20:27:11,381 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-14 21:28:21] 2025-11-14 20:27:11,381 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-14 21:28:21] 2025-11-14 20:27:11,381 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-14 21:28:21] 2025-11-14 20:27:11,381 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-14 21:28:21] 2025-11-14 20:27:11,381 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-14 21:28:21] 2025-11-14 20:27:11,381 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-14 21:28:21] 2025-11-14 20:27:11,381 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-14 21:28:21] 2025-11-14 20:27:11,381 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-14 21:28:21] 2025-11-14 20:27:11,382 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-14 21:28:21] 2025-11-14 20:27:11,382 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-14 21:28:21] 2025-11-14 20:27:11,382 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-14 21:28:21] 2025-11-14 20:27:11,382 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-14 21:28:21] 2025-11-14 20:27:11,382 | INFO     | job 6886206117 has completed (purged errors)
[2025-11-14 21:28:21] 2025-11-14 20:27:11,382 | INFO     | overall cleanup function is called
[2025-11-14 21:28:21] 2025-11-14 20:27:12,419 | INFO     | --- collectZombieJob: --- 10, [136423]
[2025-11-14 21:28:21] 2025-11-14 20:27:12,419 | INFO     | zombie collector waiting for pid 136423
[2025-11-14 21:28:21] 2025-11-14 20:27:12,420 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-14 21:28:21] 2025-11-14 20:27:12,420 | INFO     | collected zombie processes
[2025-11-14 21:28:21] 2025-11-14 20:27:12,420 | INFO     | will attempt to kill all subprocesses of pid=136423
[2025-11-14 21:28:21] 2025-11-14 20:27:13,273 | INFO     | process IDs to be killed: [136423] (in reverse order)
[2025-11-14 21:28:21] 2025-11-14 20:27:13,638 | WARNING  | found no corresponding commands to process id(s)
[2025-11-14 21:28:21] 2025-11-14 20:27:13,639 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-14 21:28:21] 2025-11-14 20:27:13,676 | INFO     | did not find any defunct processes belonging to 136423
[2025-11-14 21:28:21] 2025-11-14 20:27:13,709 | INFO     | did not find any defunct processes belonging to 136423
[2025-11-14 21:28:21] 2025-11-14 20:27:13,712 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-14 21:28:21] 2025-11-14 20:27:13,712 | INFO     | ready for new job
[2025-11-14 21:28:21] 2025-11-14 20:27:13,712 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-14 21:28:21] 2025-11-14 20:27:13,715 | INFO     | ***************************************
[2025-11-14 21:28:21] 2025-11-14 20:27:13,715 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-14 21:28:21] 2025-11-14 20:27:13,716 | INFO     | ***************************************
[2025-11-14 21:28:21] 2025-11-14 20:27:13,716 | INFO     | 
[2025-11-14 21:28:21] 2025-11-14 20:27:13,722 | INFO     | architecture information:
[2025-11-14 21:28:21] 2025-11-14 20:27:13,727 | INFO     | executing command: cat /etc/os-release
[2025-11-14 21:28:21] 2025-11-14 20:27:13,799 | INFO     | cat /etc/os-release:
[2025-11-14 21:28:21] NAME="CentOS Linux"
[2025-11-14 21:28:21] VERSION="7 (Core)"
[2025-11-14 21:28:21] ID="centos"
[2025-11-14 21:28:21] ID_LIKE="rhel fedora"
[2025-11-14 21:28:21] VERSION_ID="7"
[2025-11-14 21:28:21] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-14 21:28:21] ANSI_COLOR="0;31"
[2025-11-14 21:28:21] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-14 21:28:21] HOME_URL="https://www.centos.org/"
[2025-11-14 21:28:21] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-14 21:28:21] 
[2025-11-14 21:28:21] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-14 21:28:21] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-14 21:28:21] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-14 21:28:21] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-14 21:28:21] 
[2025-11-14 21:28:21] 2025-11-14 20:27:13,799 | INFO     | ***************************************
[2025-11-14 21:28:21] 2025-11-14 20:27:14,303 | INFO     | executing command: df -mP /scratch/.boinc/slots/2
[2025-11-14 21:28:21] 2025-11-14 20:27:14,389 | INFO     | sufficient remaining disk space (1585950228480 B)
[2025-11-14 21:28:21] 2025-11-14 20:27:14,390 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-14 21:28:21] 2025-11-14 20:27:14,390 | INFO     | current server update state: UPDATING_FINAL
[2025-11-14 21:28:21] 2025-11-14 20:27:14,390 | INFO     | update_server=False
[2025-11-14 21:28:21] 2025-11-14 20:27:14,390 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-14 21:28:21] 2025-11-14 20:27:14,391 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-14 21:28:21] 2025-11-14 20:27:14,606 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-14 21:28:21] 2025-11-14 20:27:14,606 | INFO     | aborting loop
[2025-11-14 21:28:21] 2025-11-14 20:27:15,396 | INFO     | [job] retrieve thread has finished
[2025-11-14 21:28:21] 2025-11-14 20:27:15,441 | INFO     | all data control threads have been joined
[2025-11-14 21:28:21] 2025-11-14 20:27:15,612 | INFO     | [job] job monitor thread has finished
[2025-11-14 21:28:21] 2025-11-14 20:27:15,628 | INFO     | [job] validate thread has finished
[2025-11-14 21:28:21] 2025-11-14 20:27:15,743 | INFO     | all payload control threads have been joined
[2025-11-14 21:28:21] 2025-11-14 20:27:15,760 | INFO     | [data] copytool_in thread has finished
[2025-11-14 21:28:21] 2025-11-14 20:27:15,933 | INFO     | all job control threads have been joined
[2025-11-14 21:28:21] 2025-11-14 20:27:16,217 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-14 21:28:21] 2025-11-14 20:27:16,398 | INFO     | [data] copytool_out thread has finished
[2025-11-14 21:28:21] 2025-11-14 20:27:16,447 | INFO     | [data] control thread has finished
[2025-11-14 21:28:21] 2025-11-14 20:27:16,475 | INFO     | [job] create_data_payload thread has finished
[2025-11-14 21:28:21] 2025-11-14 20:27:16,533 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-14 21:28:21] 2025-11-14 20:27:16,618 | INFO     | [payload] validate_pre thread has finished
[2025-11-14 21:28:21] 2025-11-14 20:27:16,632 | INFO     | [payload] execute_payloads thread has finished
[2025-11-14 21:28:21] 2025-11-14 20:27:16,741 | INFO     | [payload] failed_post thread has finished
[2025-11-14 21:28:21] 2025-11-14 20:27:16,749 | INFO     | [payload] control thread has finished
[2025-11-14 21:28:21] 2025-11-14 20:27:16,772 | INFO     | [payload] validate_post thread has finished
[2025-11-14 21:28:21] 2025-11-14 20:27:16,939 | INFO     | [job] control thread has finished
[2025-11-14 21:28:21] 2025-11-14 20:27:17,223 | INFO     | [job] queue monitor thread has finished
[2025-11-14 21:28:21] 2025-11-14 20:27:20,542 | INFO     | [data] queue_monitor thread has finished
[2025-11-14 21:28:21] 2025-11-14 20:27:24,860 | INFO     | job.realtimelogging is not enabled
[2025-11-14 21:28:21] 2025-11-14 20:27:25,868 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-14 21:28:21] 2025-11-14 20:27:43,852 | INFO     | PID=110584 has CPU usage=4.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-11-14 21:28:21] 2025-11-14 20:27:43,853 | INFO     | .. there are 60 such processes running
[2025-11-14 21:28:21] 2025-11-14 20:27:43,853 | INFO     | found 0 job(s) in 20 queues
[2025-11-14 21:28:21] 2025-11-14 20:27:43,853 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-14 21:28:21] 2025-11-14 20:27:43,853 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-14 21:28:21] 2025-11-14 20:28:05,956 | INFO     | [monitor] cgroup control has ended
[2025-11-14 21:28:21] 2025-11-14 20:28:06,731 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139969457665856)>', '<ExcThread(monitor, started 139968672421632)>']
[2025-11-14 21:28:21] 2025-11-14 20:28:06,996 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-14 21:28:21] 2025-11-14 20:28:06,996 | INFO     | [monitor] control thread has ended
[2025-11-14 21:28:21] 2025-11-14 20:28:11,757 | INFO     | all workflow threads have been joined
[2025-11-14 21:28:21] 2025-11-14 20:28:11,757 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-14 21:28:21] 2025-11-14 20:28:11,758 | INFO     | traces error code: 0
[2025-11-14 21:28:21] 2025-11-14 20:28:11,758 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-14 21:28:21] 2025-11-14 20:28:12,125 [wrapper] ==== pilot stdout END ====
[2025-11-14 21:28:21] 2025-11-14 20:28:12,169 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-14 21:28:21] 2025-11-14 20:28:12,187 [wrapper] pilotpid: 110584
[2025-11-14 21:28:21] 2025-11-14 20:28:12,223 [wrapper] Pilot exit status: 0
[2025-11-14 21:28:21] 2025-11-14 20:28:12,347 [wrapper] pandaids: 6886206117
[2025-11-14 21:28:21] 2025-11-14 20:28:12,567 [wrapper] cleanup supervisor_pilot 1108436 110585
[2025-11-14 21:28:21] 2025-11-14 20:28:12,579 [wrapper] Test setup, not cleaning
[2025-11-14 21:28:21] 2025-11-14 20:28:12,619 [wrapper] apfmon messages muted
[2025-11-14 21:28:21] 2025-11-14 20:28:12,662 [wrapper] ==== wrapper stdout END ====
[2025-11-14 21:28:21] 2025-11-14 20:28:12,706 [wrapper] ==== wrapper stderr END ====
[2025-11-14 21:28:21]  *** Error codes and diagnostics ***
[2025-11-14 21:28:21]     "exeErrorCode": 0,
[2025-11-14 21:28:21]     "exeErrorDiag": "",
[2025-11-14 21:28:21]     "pilotErrorCode": 0,
[2025-11-14 21:28:21]     "pilotErrorDiag": "",
[2025-11-14 21:28:21]  *** Listing of results directory ***
[2025-11-14 21:28:21] total 951412
[2025-11-14 21:28:21] -rw-r--r-- 1 boinc boinc    576529 Nov 14 15:59 pilot3.tar.gz
[2025-11-14 21:28:21] -rw-r--r-- 1 boinc boinc      5112 Nov 14 16:00 queuedata.json
[2025-11-14 21:28:21] -rwx------ 1 boinc boinc     36292 Nov 14 16:02 runpilot2-wrapper.sh
[2025-11-14 21:28:21] -rw-r--r-- 1 boinc boinc       100 Nov 14 16:46 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-14 21:28:21] -rwxr-xr-x 1 boinc boinc      7986 Nov 14 16:46 run_atlas
[2025-11-14 21:28:21] -rw-r--r-- 1 boinc boinc       105 Nov 14 16:46 job.xml
[2025-11-14 21:28:21] -rw-r--r-- 1 boinc boinc      6663 Nov 14 16:46 init_data.xml
[2025-11-14 21:28:21] -rw-r--r-- 2 boinc boinc 382331634 Nov 14 16:46 EVNT.14545720._000246.pool.root.1
[2025-11-14 21:28:21] -rw-r--r-- 2 boinc boinc     15120 Nov 14 16:46 start_atlas.sh
[2025-11-14 21:28:21] drwxrwx--x 2 boinc boinc      4096 Nov 14 16:46 shared
[2025-11-14 21:28:21] -rw-r--r-- 2 boinc boinc    590123 Nov 14 16:46 input.tar.gz
[2025-11-14 21:28:21] -rw-r--r-- 1 boinc boinc         0 Nov 14 16:46 boinc_lockfile
[2025-11-14 21:28:21] -rw-r--r-- 1 boinc boinc      2930 Nov 14 16:46 pandaJob.out
[2025-11-14 21:28:21] -rw------- 1 boinc boinc    988602 Nov 14 16:46 agis_schedconf.cvmfs.json
[2025-11-14 21:28:21] drwx------ 5 boinc boinc      4096 Nov 14 16:46 pilot3
[2025-11-14 21:28:21] -rw-r--r-- 1 boinc boinc       532 Nov 14 21:10 boinc_task_state.xml
[2025-11-14 21:28:21] -rw------- 1 boinc boinc 579102300 Nov 14 21:25 HITS.47450870._002277.pool.root.1
[2025-11-14 21:28:21] -rw------- 1 boinc boinc      1035 Nov 14 21:26 memory_monitor_summary.json
[2025-11-14 21:28:21] -rw------- 1 boinc boinc   1526297 Nov 14 21:26 agis_ddmendpoints.agis.ALL.json
[2025-11-14 21:28:21] -rw------- 1 boinc boinc   2129999 Nov 14 21:26 log.47450870._002277.job.log.tgz.1
[2025-11-14 21:28:21] -rw------- 1 boinc boinc        95 Nov 14 21:26 pilot_heartbeat.json
[2025-11-14 21:28:21] -rw------- 1 boinc boinc     26740 Nov 14 21:27 heartbeat.json
[2025-11-14 21:28:21] -rw------- 1 boinc boinc      4898 Nov 14 21:28 pilotlog.txt
[2025-11-14 21:28:21] -rw------- 1 boinc boinc   2295711 Nov 14 21:28 log.47450870._002277.job.log.1
[2025-11-14 21:28:21] -rw------- 1 boinc boinc       353 Nov 14 21:28 output.list
[2025-11-14 21:28:21] -rw-r--r-- 1 boinc boinc       620 Nov 14 21:28 runtime_log
[2025-11-14 21:28:21] -rw------- 1 boinc boinc   4464640 Nov 14 21:28 result.tar.gz
[2025-11-14 21:28:21] -rw------- 1 boinc boinc       671 Nov 14 21:28 SFQNDmnUAe8n9Rq4apOajLDm4fhM0noT9bVof3QYDm8wqMDmZAfa2n.diag
[2025-11-14 21:28:21] -rw-r--r-- 1 boinc boinc      8765 Nov 14 21:28 runtime_log.err
[2025-11-14 21:28:21] -rw-r--r-- 1 boinc boinc        28 Nov 14 21:28 wrapper_checkpoint.txt
[2025-11-14 21:28:21] -rw-r--r-- 1 boinc boinc      8192 Nov 14 21:28 boinc_mmap_file
[2025-11-14 21:28:21] -rw-r--r-- 1 boinc boinc     21110 Nov 14 21:28 stderr.txt
[2025-11-14 21:28:21] HITS file was successfully produced:
[2025-11-14 21:28:21] -rw------- 1 boinc boinc 579102300 Nov 14 21:25 shared/HITS.pool.root.1
[2025-11-14 21:28:21]  *** Contents of shared directory: ***
[2025-11-14 21:28:21] total 943868
[2025-11-14 21:28:21] -rw-r--r-- 2 boinc boinc 382331634 Nov 14 16:46 ATLAS.root_0
[2025-11-14 21:28:21] -rw-r--r-- 2 boinc boinc     15120 Nov 14 16:46 start_atlas.sh
[2025-11-14 21:28:21] -rw-r--r-- 2 boinc boinc    590123 Nov 14 16:46 input.tar.gz
[2025-11-14 21:28:21] -rw------- 1 boinc boinc 579102300 Nov 14 21:25 HITS.pool.root.1
[2025-11-14 21:28:21] -rw------- 1 boinc boinc   4464640 Nov 14 21:28 result.tar.gz
21:28:23 (98851): run_atlas exited; CPU time 152665.755134
21:28:23 (98851): called boinc_finish(0)

</stderr_txt>
]]>

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