Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
16:18:56 (2780188): wrapper (7.7.26015): starting
16:18:56 (2780188): wrapper: running run_atlas (--nthreads 3)
[2025-11-14 16:18:56] Arguments: --nthreads 3
[2025-11-14 16:18:56] Threads: 3
[2025-11-14 16:18:56] Checking for CVMFS
[2025-11-14 16:18:57] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-14 16:18:57] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-14 16:18:57] Running cvmfs_config stat atlas.cern.ch
[2025-11-14 16:18:58] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-14 16:18:58] 2.9.2.0 2780384 0 30060 152860 4 1 33442161 36864000 0 130560 0 0 0.000 1292 17459 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-11-14 16:18:58] CVMFS is ok
[2025-11-14 16:18:58] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-14 16:18:58] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-14 16:18:58] Further information can be found at the LHC@home message board.
[2025-11-14 16:18:58] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-14 16:18:58] Checking for apptainer binary...
[2025-11-14 16:18:58] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-14 16:18:58] Running /usr/bin/apptainer --version
[2025-11-14 16:18:58] apptainer version 1.4.1-1.1
[2025-11-14 16:18:58] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-14 16:18:58] magicA161a
[2025-11-14 16:18:58] apptainer works
[2025-11-14 16:18:58] Set ATHENA_PROC_NUMBER=3
[2025-11-14 16:18:58] Set ATHENA_CORE_NUMBER=3
[2025-11-14 16:18:58] Starting ATLAS job with PandaID=6886209344
[2025-11-14 16:18:58] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-14 21:15:35]  *** The last 200 lines of the pilot log: ***
[2025-11-14 21:15:35] 2025-11-14 20:14:55,631 | INFO     | executing command: cat /etc/os-release
[2025-11-14 21:15:35] 2025-11-14 20:14:55,639 | INFO     | cat /etc/os-release:
[2025-11-14 21:15:35] NAME="CentOS Linux"
[2025-11-14 21:15:35] VERSION="7 (Core)"
[2025-11-14 21:15:35] ID="centos"
[2025-11-14 21:15:35] ID_LIKE="rhel fedora"
[2025-11-14 21:15:35] VERSION_ID="7"
[2025-11-14 21:15:35] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-14 21:15:35] ANSI_COLOR="0;31"
[2025-11-14 21:15:35] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-14 21:15:35] HOME_URL="https://www.centos.org/"
[2025-11-14 21:15:35] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-14 21:15:35] 
[2025-11-14 21:15:35] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-14 21:15:35] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-14 21:15:35] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-14 21:15:35] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-14 21:15:35] 
[2025-11-14 21:15:35] 2025-11-14 20:14:55,639 | INFO     | ***************************************
[2025-11-14 21:15:35] 2025-11-14 20:14:56,143 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-11-14 21:15:35] 2025-11-14 20:14:56,155 | INFO     | sufficient remaining disk space (370912788480 B)
[2025-11-14 21:15:35] 2025-11-14 20:14:56,156 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-14 21:15:35] 2025-11-14 20:14:56,156 | INFO     | current server update state: UPDATING_FINAL
[2025-11-14 21:15:35] 2025-11-14 20:14:56,156 | INFO     | update_server=False
[2025-11-14 21:15:35] 2025-11-14 20:14:56,156 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-14 21:15:35] 2025-11-14 20:14:56,156 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-14 21:15:35] 2025-11-14 20:14:56,156 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-14 21:15:35] 2025-11-14 20:14:56,156 | INFO     | aborting loop
[2025-11-14 21:15:35] 2025-11-14 20:14:56,211 | INFO     | all job control threads have been joined
[2025-11-14 21:15:35] 2025-11-14 20:14:57,092 | INFO     | all data control threads have been joined
[2025-11-14 21:15:35] 2025-11-14 20:14:57,113 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-14 21:15:35] 2025-11-14 20:14:57,161 | INFO     | [job] queue monitor thread has finished
[2025-11-14 21:15:35] 2025-11-14 20:14:57,162 | INFO     | [job] retrieve thread has finished
[2025-11-14 21:15:35] 2025-11-14 20:14:57,162 | INFO     | [job] job monitor thread has finished
[2025-11-14 21:15:35] 2025-11-14 20:14:57,185 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-14 21:15:35] 2025-11-14 20:14:57,217 | INFO     | [job] control thread has finished
[2025-11-14 21:15:35] 2025-11-14 20:14:57,454 | INFO     | all payload control threads have been joined
[2025-11-14 21:15:35] 2025-11-14 20:14:57,657 | INFO     | [data] copytool_in thread has finished
[2025-11-14 21:15:35] 2025-11-14 20:14:57,670 | INFO     | [payload] validate_post thread has finished
[2025-11-14 21:15:35] 2025-11-14 20:14:58,098 | INFO     | [data] control thread has finished
[2025-11-14 21:15:35] 2025-11-14 20:14:58,224 | INFO     | [job] validate thread has finished
[2025-11-14 21:15:35] 2025-11-14 20:14:58,266 | INFO     | [payload] execute_payloads thread has finished
[2025-11-14 21:15:35] 2025-11-14 20:14:58,318 | INFO     | [payload] validate_pre thread has finished
[2025-11-14 21:15:35] 2025-11-14 20:14:58,337 | INFO     | [job] create_data_payload thread has finished
[2025-11-14 21:15:35] 2025-11-14 20:14:58,460 | INFO     | [payload] control thread has finished
[2025-11-14 21:15:35] 2025-11-14 20:14:58,738 | INFO     | [payload] failed_post thread has finished
[2025-11-14 21:15:35] 2025-11-14 20:14:59,119 | INFO     | [data] copytool_out thread has finished
[2025-11-14 21:15:35] 2025-11-14 20:14:59,658 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-14 21:15:35] 2025-11-14 20:15:03,665 | INFO     | [data] queue_monitor thread has finished
[2025-11-14 21:15:35] 2025-11-14 20:15:27,154 | INFO     | PID=2784456 has CPU usage=1.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-14 21:15:35] 2025-11-14 20:15:27,154 | INFO     | found 0 job(s) in 20 queues
[2025-11-14 21:15:35] 2025-11-14 20:15:27,154 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-14 21:15:35] 2025-11-14 20:15:27,154 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-14 21:15:35] 2025-11-14 20:15:28,467 | INFO     | [monitor] cgroup control has ended
[2025-11-14 21:15:35] 2025-11-14 20:15:29,915 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139779552417600)>', '<ExcThread(monitor, started 139778754336512)>']
[2025-11-14 21:15:35] 2025-11-14 20:15:30,170 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-14 21:15:35] 2025-11-14 20:15:30,170 | INFO     | [monitor] control thread has ended
[2025-11-14 21:15:35] 2025-11-14 20:15:34,941 | INFO     | all workflow threads have been joined
[2025-11-14 21:15:35] 2025-11-14 20:15:34,941 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-14 21:15:35] 2025-11-14 20:15:34,941 | INFO     | traces error code: 0
[2025-11-14 21:15:35] 2025-11-14 20:15:34,941 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-14 21:15:35] 2025-11-14 20:15:34,998 [wrapper] ==== pilot stdout END ====
[2025-11-14 21:15:35] 2025-11-14 20:15:35,000 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-14 21:15:35] 2025-11-14 20:15:35,002 [wrapper] pilotpid: 2784456
[2025-11-14 21:15:35] 2025-11-14 20:15:35,005 [wrapper] Pilot exit status: 0
[2025-11-14 21:15:35] 2025-11-14 20:15:35,012 [wrapper] pandaids: 6886209344
[2025-11-14 21:15:35] 2025-11-14 20:15:35,029 [wrapper] cleanup supervisor_pilot 2824339 2784457
[2025-11-14 21:15:35] 2025-11-14 20:15:35,031 [wrapper] Test setup, not cleaning
[2025-11-14 21:15:35] 2025-11-14 20:15:35,034 [wrapper] apfmon messages muted
[2025-11-14 21:15:35] 2025-11-14 20:15:35,036 [wrapper] ==== wrapper stdout END ====
[2025-11-14 21:15:35] 2025-11-14 20:15:35,038 [wrapper] ==== wrapper stderr END ====
[2025-11-14 21:15:35]  *** Error codes and diagnostics ***
[2025-11-14 21:15:35]     "exeErrorCode": 0,
[2025-11-14 21:15:35]     "exeErrorDiag": "",
[2025-11-14 21:15:35]     "pilotErrorCode": 0,
[2025-11-14 21:15:35]     "pilotErrorDiag": "",
[2025-11-14 21:15:35]  *** Listing of results directory ***
[2025-11-14 21:15:35] total 917892
[2025-11-14 21:15:35] -rw-r--r-- 1 boinc boinc    576529 Nov 14 15:59 pilot3.tar.gz
[2025-11-14 21:15:35] -rwx------ 1 boinc boinc     36292 Nov 14 16:03 runpilot2-wrapper.sh
[2025-11-14 21:15:35] -rw-r--r-- 1 boinc boinc      5112 Nov 14 16:03 queuedata.json
[2025-11-14 21:15:35] -rw-r--r-- 1 boinc boinc       100 Nov 14 16:18 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-14 21:15:35] -rwxr-xr-x 1 boinc boinc      7986 Nov 14 16:18 run_atlas
[2025-11-14 21:15:35] -rw-r--r-- 1 boinc boinc       105 Nov 14 16:18 job.xml
[2025-11-14 21:15:35] -rw-r--r-- 2 boinc boinc 376603213 Nov 14 16:18 EVNT.14545720._000253.pool.root.1
[2025-11-14 21:15:35] -rw-r--r-- 2 boinc boinc    590126 Nov 14 16:18 input.tar.gz
[2025-11-14 21:15:35] -rw-r--r-- 2 boinc boinc     15120 Nov 14 16:18 start_atlas.sh
[2025-11-14 21:15:35] drwxrwx--x 2 boinc boinc      4096 Nov 14 16:18 shared
[2025-11-14 21:15:35] -rw-r--r-- 1 boinc boinc         0 Nov 14 16:18 boinc_setup_complete
[2025-11-14 21:15:35] -rw-r--r-- 1 boinc boinc      6446 Nov 14 16:18 init_data.xml
[2025-11-14 21:15:35] -rw-r--r-- 1 boinc boinc         0 Nov 14 16:18 boinc_lockfile
[2025-11-14 21:15:35] -rw-r--r-- 1 boinc boinc      2930 Nov 14 16:18 pandaJob.out
[2025-11-14 21:15:35] -rw------- 1 boinc boinc    988602 Nov 14 16:19 agis_schedconf.cvmfs.json
[2025-11-14 21:15:35] drwx------ 5 boinc boinc      4096 Nov 14 16:19 pilot3
[2025-11-14 21:15:35] -rw-r--r-- 1 boinc boinc       531 Nov 14 21:12 boinc_task_state.xml
[2025-11-14 21:15:35] -rw------- 1 boinc boinc        95 Nov 14 21:14 pilot_heartbeat.json
[2025-11-14 21:15:35] -rw------- 1 boinc boinc 552151387 Nov 14 21:14 HITS.47450870._002350.pool.root.1
[2025-11-14 21:15:35] -rw------- 1 boinc boinc      1017 Nov 14 21:14 memory_monitor_summary.json
[2025-11-14 21:15:35] -rw------- 1 boinc boinc   1526297 Nov 14 21:14 agis_ddmendpoints.agis.ALL.json
[2025-11-14 21:15:35] -rw------- 1 boinc boinc   1095546 Nov 14 21:14 log.47450870._002350.job.log.tgz.1
[2025-11-14 21:15:35] -rw------- 1 boinc boinc     27110 Nov 14 21:14 heartbeat.json
[2025-11-14 21:15:35] -rw-r--r-- 1 boinc boinc        28 Nov 14 21:15 wrapper_checkpoint.txt
[2025-11-14 21:15:35] -rw-r--r-- 1 boinc boinc      8192 Nov 14 21:15 boinc_mmap_file
[2025-11-14 21:15:35] -rw------- 1 boinc boinc      4752 Nov 14 21:15 pilotlog.txt
[2025-11-14 21:15:35] -rw------- 1 boinc boinc   2516668 Nov 14 21:15 log.47450870._002350.job.log.1
[2025-11-14 21:15:35] -rw------- 1 boinc boinc       353 Nov 14 21:15 output.list
[2025-11-14 21:15:35] -rw-r--r-- 1 boinc boinc       620 Nov 14 21:15 runtime_log
[2025-11-14 21:15:35] -rw------- 1 boinc boinc   3645440 Nov 14 21:15 result.tar.gz
[2025-11-14 21:15:35] -rw-r--r-- 1 boinc boinc      8798 Nov 14 21:15 runtime_log.err
[2025-11-14 21:15:35] -rw------- 1 boinc boinc       669 Nov 14 21:15 8EUMDmaVAe8n9Rq4apOajLDm4fhM0noT9bVof3QYDmvxqMDmjm2P3n.diag
[2025-11-14 21:15:35] -rw-r--r-- 1 boinc boinc      8877 Nov 14 21:15 stderr.txt
[2025-11-14 21:15:35] HITS file was successfully produced:
[2025-11-14 21:15:35] -rw------- 1 boinc boinc 552151387 Nov 14 21:14 shared/HITS.pool.root.1
[2025-11-14 21:15:35]  *** Contents of shared directory: ***
[2025-11-14 21:15:35] total 911156
[2025-11-14 21:15:35] -rw-r--r-- 2 boinc boinc 376603213 Nov 14 16:18 ATLAS.root_0
[2025-11-14 21:15:35] -rw-r--r-- 2 boinc boinc    590126 Nov 14 16:18 input.tar.gz
[2025-11-14 21:15:35] -rw-r--r-- 2 boinc boinc     15120 Nov 14 16:18 start_atlas.sh
[2025-11-14 21:15:35] -rw------- 1 boinc boinc 552151387 Nov 14 21:14 HITS.pool.root.1
[2025-11-14 21:15:35] -rw------- 1 boinc boinc   3645440 Nov 14 21:15 result.tar.gz
21:15:36 (2780188): run_atlas exited; CPU time 51877.148767
21:15:36 (2780188): called boinc_finish(0)

</stderr_txt>
]]>

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