Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
16:13:04 (655916): wrapper (7.7.26015): starting
16:13:04 (655916): wrapper: running run_atlas (--nthreads 4)
[2025-11-14 16:13:04] Arguments: --nthreads 4
[2025-11-14 16:13:04] Threads: 4
[2025-11-14 16:13:04] Checking for CVMFS
[2025-11-14 16:13:05] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-14 16:13:05] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-14 16:13:05] Running cvmfs_config stat atlas.cern.ch
[2025-11-14 16:13:06] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-14 16:13:06] 2.9.2.0 656112 0 30008 152860 4 1 31726618 36864000 0 130560 0 0 0.000 1292 58727 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-11-14 16:13:06] CVMFS is ok
[2025-11-14 16:13:06] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-14 16:13:06] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-14 16:13:06] Further information can be found at the LHC@home message board.
[2025-11-14 16:13:06] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-14 16:13:06] Checking for apptainer binary...
[2025-11-14 16:13:06] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-14 16:13:06] Running /usr/bin/apptainer --version
[2025-11-14 16:13:06] apptainer version 1.4.1-1.1
[2025-11-14 16:13:06] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-14 16:13:06] thA309
[2025-11-14 16:13:06] apptainer works
[2025-11-14 16:13:06] Set ATHENA_PROC_NUMBER=4
[2025-11-14 16:13:06] Set ATHENA_CORE_NUMBER=4
[2025-11-14 16:13:06] Starting ATLAS job with PandaID=6886205549
[2025-11-14 16:13:06] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-14 20:39:41]  *** The last 200 lines of the pilot log: ***
[2025-11-14 20:39:41] ID_LIKE="rhel fedora"
[2025-11-14 20:39:41] VERSION_ID="7"
[2025-11-14 20:39:41] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-14 20:39:41] ANSI_COLOR="0;31"
[2025-11-14 20:39:41] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-14 20:39:41] HOME_URL="https://www.centos.org/"
[2025-11-14 20:39:41] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-14 20:39:41] 
[2025-11-14 20:39:41] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-14 20:39:41] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-14 20:39:41] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-14 20:39:41] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-14 20:39:41] 
[2025-11-14 20:39:41] 2025-11-14 19:39:01,592 | INFO     | ***************************************
[2025-11-14 20:39:41] 2025-11-14 19:39:02,095 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-11-14 20:39:41] 2025-11-14 19:39:02,113 | INFO     | sufficient remaining disk space (227494854656 B)
[2025-11-14 20:39:41] 2025-11-14 19:39:02,113 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-14 20:39:41] 2025-11-14 19:39:02,113 | INFO     | current server update state: UPDATING_FINAL
[2025-11-14 20:39:41] 2025-11-14 19:39:02,113 | INFO     | update_server=False
[2025-11-14 20:39:41] 2025-11-14 19:39:02,113 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-14 20:39:41] 2025-11-14 19:39:02,114 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-14 20:39:41] 2025-11-14 19:39:02,192 | INFO     | all data control threads have been joined
[2025-11-14 20:39:41] 2025-11-14 19:39:02,584 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-14 20:39:41] 2025-11-14 19:39:02,857 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-14 20:39:41] 2025-11-14 19:39:02,857 | INFO     | aborting loop
[2025-11-14 20:39:41] 2025-11-14 19:39:03,026 | INFO     | all job control threads have been joined
[2025-11-14 20:39:41] 2025-11-14 19:39:03,112 | INFO     | all payload control threads have been joined
[2025-11-14 20:39:41] 2025-11-14 19:39:03,119 | INFO     | [job] retrieve thread has finished
[2025-11-14 20:39:41] 2025-11-14 19:39:03,119 | INFO     | [job] queue monitor thread has finished
[2025-11-14 20:39:41] 2025-11-14 19:39:03,198 | INFO     | [data] control thread has finished
[2025-11-14 20:39:41] 2025-11-14 19:39:03,207 | INFO     | [data] copytool_in thread has finished
[2025-11-14 20:39:41] 2025-11-14 19:39:03,217 | INFO     | [payload] validate_post thread has finished
[2025-11-14 20:39:41] 2025-11-14 19:39:03,474 | INFO     | [payload] execute_payloads thread has finished
[2025-11-14 20:39:41] 2025-11-14 19:39:03,863 | INFO     | [job] job monitor thread has finished
[2025-11-14 20:39:41] 2025-11-14 19:39:03,965 | INFO     | [job] validate thread has finished
[2025-11-14 20:39:41] 2025-11-14 19:39:04,023 | INFO     | [job] create_data_payload thread has finished
[2025-11-14 20:39:41] 2025-11-14 19:39:04,032 | INFO     | [job] control thread has finished
[2025-11-14 20:39:41] 2025-11-14 19:39:04,118 | INFO     | [payload] control thread has finished
[2025-11-14 20:39:41] 2025-11-14 19:39:04,138 | INFO     | [payload] validate_pre thread has finished
[2025-11-14 20:39:41] 2025-11-14 19:39:04,182 | INFO     | [payload] failed_post thread has finished
[2025-11-14 20:39:41] 2025-11-14 19:39:04,590 | INFO     | [data] copytool_out thread has finished
[2025-11-14 20:39:41] 2025-11-14 19:39:05,368 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-14 20:39:41] 2025-11-14 19:39:09,375 | INFO     | [data] queue_monitor thread has finished
[2025-11-14 20:39:41] 2025-11-14 19:39:13,163 | INFO     | job.realtimelogging is not enabled
[2025-11-14 20:39:41] 2025-11-14 19:39:14,168 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-14 20:39:41] 2025-11-14 19:39:32,211 | INFO     | PID=660257 has CPU usage=2.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-11-14 20:39:41] 2025-11-14 19:39:32,211 | INFO     | found 0 job(s) in 20 queues
[2025-11-14 20:39:41] 2025-11-14 19:39:32,211 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-14 20:39:41] 2025-11-14 19:39:32,211 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-14 20:39:41] 2025-11-14 19:39:36,192 | INFO     | [monitor] cgroup control has ended
[2025-11-14 20:39:41] 2025-11-14 19:39:36,703 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140318374377280)>', '<ExcThread(monitor, started 140317378471680)>']
[2025-11-14 20:39:41] 2025-11-14 19:39:37,238 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-14 20:39:41] 2025-11-14 19:39:37,238 | INFO     | [monitor] control thread has ended
[2025-11-14 20:39:41] 2025-11-14 19:39:41,728 | INFO     | all workflow threads have been joined
[2025-11-14 20:39:41] 2025-11-14 19:39:41,729 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-14 20:39:41] 2025-11-14 19:39:41,730 | INFO     | traces error code: 0
[2025-11-14 20:39:41] 2025-11-14 19:39:41,730 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-14 20:39:41] 2025-11-14 19:39:41,813 [wrapper] ==== pilot stdout END ====
[2025-11-14 20:39:41] 2025-11-14 19:39:41,817 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-14 20:39:41] 2025-11-14 19:39:41,821 [wrapper] pilotpid: 660257
[2025-11-14 20:39:41] 2025-11-14 19:39:41,825 [wrapper] Pilot exit status: 0
[2025-11-14 20:39:41] 2025-11-14 19:39:41,836 [wrapper] pandaids: 6886205549
[2025-11-14 20:39:41] 2025-11-14 19:39:41,860 [wrapper] cleanup supervisor_pilot  700165 660258
[2025-11-14 20:39:41] 2025-11-14 19:39:41,864 [wrapper] Test setup, not cleaning
[2025-11-14 20:39:41] 2025-11-14 19:39:41,869 [wrapper] apfmon messages muted
[2025-11-14 20:39:41] 2025-11-14 19:39:41,873 [wrapper] ==== wrapper stdout END ====
[2025-11-14 20:39:41] 2025-11-14 19:39:41,876 [wrapper] ==== wrapper stderr END ====
[2025-11-14 20:39:41]  *** Error codes and diagnostics ***
[2025-11-14 20:39:41]     "exeErrorCode": 0,
[2025-11-14 20:39:41]     "exeErrorDiag": "",
[2025-11-14 20:39:41]     "pilotErrorCode": 0,
[2025-11-14 20:39:41]     "pilotErrorDiag": "",
[2025-11-14 20:39:41]  *** Listing of results directory ***
[2025-11-14 20:39:41] total 923824
[2025-11-14 20:39:41] -rw-r--r-- 1 boinc boinc    576529 Nov 14 15:59 pilot3.tar.gz
[2025-11-14 20:39:41] -rw-r--r-- 1 boinc boinc      5112 Nov 14 16:00 queuedata.json
[2025-11-14 20:39:41] -rwx------ 1 boinc boinc     36292 Nov 14 16:01 runpilot2-wrapper.sh
[2025-11-14 20:39:41] -rw-r--r-- 1 boinc boinc       100 Nov 14 16:13 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-14 20:39:41] -rwxr-xr-x 1 boinc boinc      7986 Nov 14 16:13 run_atlas
[2025-11-14 20:39:41] -rw-r--r-- 1 boinc boinc       105 Nov 14 16:13 job.xml
[2025-11-14 20:39:41] -rw-r--r-- 2 boinc boinc 377640897 Nov 14 16:13 EVNT.14545720._000241.pool.root.1
[2025-11-14 20:39:41] -rw-r--r-- 2 boinc boinc    590123 Nov 14 16:13 input.tar.gz
[2025-11-14 20:39:41] -rw-r--r-- 2 boinc boinc     15120 Nov 14 16:13 start_atlas.sh
[2025-11-14 20:39:41] drwxrwx--x 2 boinc boinc      4096 Nov 14 16:13 shared
[2025-11-14 20:39:41] -rw-r--r-- 1 boinc boinc         0 Nov 14 16:13 boinc_setup_complete
[2025-11-14 20:39:41] -rw-r--r-- 1 boinc boinc      6375 Nov 14 16:13 init_data.xml
[2025-11-14 20:39:41] -rw-r--r-- 1 boinc boinc         0 Nov 14 16:13 boinc_lockfile
[2025-11-14 20:39:41] -rw-r--r-- 1 boinc boinc      2929 Nov 14 16:13 pandaJob.out
[2025-11-14 20:39:41] -rw------- 1 boinc boinc    988602 Nov 14 16:13 agis_schedconf.cvmfs.json
[2025-11-14 20:39:41] drwx------ 5 boinc boinc      4096 Nov 14 16:13 pilot3
[2025-11-14 20:39:41] -rw-r--r-- 1 boinc boinc       531 Nov 14 20:35 boinc_task_state.xml
[2025-11-14 20:39:41] -rw------- 1 boinc boinc 557461479 Nov 14 20:38 HITS.47450870._002228.pool.root.1
[2025-11-14 20:39:41] -rw------- 1 boinc boinc      1024 Nov 14 20:38 memory_monitor_summary.json
[2025-11-14 20:39:41] -rw------- 1 boinc boinc        95 Nov 14 20:38 pilot_heartbeat.json
[2025-11-14 20:39:41] -rw------- 1 boinc boinc   1526297 Nov 14 20:38 agis_ddmendpoints.agis.ALL.json
[2025-11-14 20:39:41] -rw------- 1 boinc boinc   1212374 Nov 14 20:38 log.47450870._002228.job.log.tgz.1
[2025-11-14 20:39:41] -rw------- 1 boinc boinc     28274 Nov 14 20:39 heartbeat.json
[2025-11-14 20:39:41] -rw-r--r-- 1 boinc boinc      8192 Nov 14 20:39 boinc_mmap_file
[2025-11-14 20:39:41] -rw-r--r-- 1 boinc boinc        28 Nov 14 20:39 wrapper_checkpoint.txt
[2025-11-14 20:39:41] -rw------- 1 boinc boinc      4823 Nov 14 20:39 pilotlog.txt
[2025-11-14 20:39:41] -rw------- 1 boinc boinc   2263203 Nov 14 20:39 log.47450870._002228.job.log.1
[2025-11-14 20:39:41] -rw------- 1 boinc boinc       353 Nov 14 20:39 output.list
[2025-11-14 20:39:41] -rw-r--r-- 1 boinc boinc       620 Nov 14 20:39 runtime_log
[2025-11-14 20:39:41] -rw------- 1 boinc boinc   3512320 Nov 14 20:39 result.tar.gz
[2025-11-14 20:39:41] -rw-r--r-- 1 boinc boinc      8778 Nov 14 20:39 runtime_log.err
[2025-11-14 20:39:41] -rw------- 1 boinc boinc       665 Nov 14 20:39 6lvKDmeTAe8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm6tJODmeeXq1m.diag
[2025-11-14 20:39:41] -rw-r--r-- 1 boinc boinc      8667 Nov 14 20:39 stderr.txt
[2025-11-14 20:39:41] HITS file was successfully produced:
[2025-11-14 20:39:41] -rw------- 1 boinc boinc 557461479 Nov 14 20:38 shared/HITS.pool.root.1
[2025-11-14 20:39:41]  *** Contents of shared directory: ***
[2025-11-14 20:39:41] total 917224
[2025-11-14 20:39:41] -rw-r--r-- 2 boinc boinc 377640897 Nov 14 16:13 ATLAS.root_0
[2025-11-14 20:39:41] -rw-r--r-- 2 boinc boinc    590123 Nov 14 16:13 input.tar.gz
[2025-11-14 20:39:41] -rw-r--r-- 2 boinc boinc     15120 Nov 14 16:13 start_atlas.sh
[2025-11-14 20:39:41] -rw------- 1 boinc boinc 557461479 Nov 14 20:38 HITS.pool.root.1
[2025-11-14 20:39:41] -rw------- 1 boinc boinc   3512320 Nov 14 20:39 result.tar.gz
20:39:43 (655916): run_atlas exited; CPU time 61519.847571
20:39:43 (655916): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN