Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
07:23:00 (1411058): wrapper (7.7.26015): starting
07:23:00 (1411058): wrapper: running run_atlas (--nthreads 8)
[2025-11-14 07:23:00] Arguments: --nthreads 8
[2025-11-14 07:23:00] Threads: 8
[2025-11-14 07:23:00] Checking for CVMFS
[2025-11-14 07:23:01] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-14 07:23:01] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-14 07:23:01] Running cvmfs_config stat atlas.cern.ch
[2025-11-14 07:23:02] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-14 07:23:02] 2.11.3.0 137784 11283 209184 152860 3 258 43858121 45568001 15290 130560 0 65601554 99.802 41010288 19364 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-11-14 07:23:02] CVMFS is ok
[2025-11-14 07:23:03] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-14 07:23:03] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-14 07:23:03] Further information can be found at the LHC@home message board.
[2025-11-14 07:23:03] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-14 07:23:03] Checking for apptainer binary...
[2025-11-14 07:23:03] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-14 07:23:03] Running /usr/bin/apptainer --version
[2025-11-14 07:23:03] apptainer version 1.4.1-1.el9
[2025-11-14 07:23:03] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-14 07:23:04] wns0008.triumf.lcg
[2025-11-14 07:23:04] apptainer works
[2025-11-14 07:23:04] Set ATHENA_PROC_NUMBER=8
[2025-11-14 07:23:04] Set ATHENA_CORE_NUMBER=8
[2025-11-14 07:23:04] Starting ATLAS job with PandaID=6886206117
[2025-11-14 07:23:04] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-14 07:32:53]  *** The last 200 lines of the pilot log: ***
[2025-11-14 07:32:53] 2025-11-14 15:32:18,374 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-14 07:32:53] 2025-11-14 15:32:18,374 | WARNING  | wrong length of table data, x=[1763133953.0, 1763134014.0, 1763134075.0, 1763134136.0], y=[1338.0, 199474.0, 756565.0, 659210.0] (must be same and length>=4)
[2025-11-14 07:32:53] 2025-11-14 15:32:18,375 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2025-11-14 07:32:53] 2025-11-14 15:32:18,375 | INFO     | ..............................
[2025-11-14 07:32:53] 2025-11-14 15:32:18,375 | INFO     | . Timing measurements:
[2025-11-14 07:32:53] 2025-11-14 15:32:18,375 | INFO     | . get job = 0 s
[2025-11-14 07:32:53] 2025-11-14 15:32:18,375 | INFO     | . initial setup = 4 s
[2025-11-14 07:32:53] 2025-11-14 15:32:18,375 | INFO     | . payload setup = 30 s
[2025-11-14 07:32:53] 2025-11-14 15:32:18,375 | INFO     | . stage-in = 0 s
[2025-11-14 07:32:53] 2025-11-14 15:32:18,375 | INFO     | . payload execution = 269 s
[2025-11-14 07:32:53] 2025-11-14 15:32:18,376 | INFO     | . stage-out = 1 s
[2025-11-14 07:32:53] 2025-11-14 15:32:18,376 | INFO     | . log creation = 0 s
[2025-11-14 07:32:53] 2025-11-14 15:32:18,376 | INFO     | ..............................
[2025-11-14 07:32:53] 2025-11-14 15:32:18,376 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-14 07:32:53] 2025-11-14 15:32:18,376 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6886206117/pilotlog.txt
[2025-11-14 07:32:53] 2025-11-14 15:32:18,394 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-11-14 07:32:53] - Log from pilotlog.txt -
[2025-11-14 07:32:53] 2025-11-14 15:32:18,372 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6886206117/memory_monitor_summary.json (trf name=prmon)
[2025-11-14 07:32:53] 2025-11-14 15:32:18,373 | INFO     | extracted standard info from prmon json
[2025-11-14 07:32:53] 2025-11-14 15:32:18,373 | INFO     | extracted standard memory fields from prmon json
[2025-11-14 07:32:53] 2025-11-14 15:32:18,373 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-14 07:32:53] 2025-11-14 15:32:18,373 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-11-14 07:32:53] 2025-11-14 15:32:18,374 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-14 07:32:53] 2025-11-14 15:32:18,374 | WARNING  | wrong length of table data, x=[1763133953.0, 1763134014.0, 1763134075.0, 1763134136.0], y=[1338.0, 199474.0, 756565.0, 659210.0] (must be same and length>=4)
[2025-11-14 07:32:53] 2025-11-14 15:32:18,375 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2025-11-14 07:32:53] 2025-11-14 15:32:18,375 | INFO     | ..............................
[2025-11-14 07:32:53] 2025-11-14 15:32:18,375 | INFO     | . Timing measurements:
[2025-11-14 07:32:53] 2025-11-14 15:32:18,375 | INFO     | . get job = 0 s
[2025-11-14 07:32:53] 2025-11-14 15:32:18,375 | INFO     | . initial setup = 4 s
[2025-11-14 07:32:53] 2025-11-14 15:32:18,375 | INFO     | . payload setup = 30 s
[2025-11-14 07:32:53] 2025-11-14 15:32:18,375 | INFO     | . stage-in = 0 s
[2025-11-14 07:32:53] 2025-11-14 15:32:18,375 | INFO     | . payload execution = 269 s
[2025-11-14 07:32:53] 2025-11-14 15:32:18,376 | INFO     | . stage-out = 1 s
[2025-11-14 07:32:53] 2025-11-14 15:32:18,376 | INFO     | . log creation = 0 s
[2025-11-14 07:32:53] 2025-11-14 15:32:18,376 | INFO     | ..............................
[2025-11-14 07:32:53] 2025-11-14 15:32:18,376 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-14 07:32:53] 2025-11-14 15:32:18,376 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6886206117/pilotlog.txt
[2025-11-14 07:32:53] 2025-11-14 15:32:18,394 | WARNING  | 
[2025-11-14 07:32:53] [begin log extracts]
[2025-11-14 07:32:53] - Log from pilotlog.txt -
[2025-11-14 07:32:53] 2025-11-14 15:32:18,372 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6886206117/memory_monitor_summary.json (trf name=prmon)
[2025-11-14 07:32:53] 2025-11-14 15:32:18,373 | INFO     | extracted standard info from prmon json
[2025-11-14 07:32:53] 2025-11-14 15:32:18,373 | INFO     | extracted standard memory fields from prmon json
[2025-11-14 07:32:53] 2025-11-14 15:32:18,373 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-14 07:32:53] 2025-11-14 15:32:18,373 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-11-14 07:32:53] 2025-11-14 15:32:18,374 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-14 07:32:53] 2025-11-14 15:32:18,374 | WARNING  | wrong length of table data, x=[1763133953.0, 1763134014.0, 1763134075.0, 1763134136.0], y=[1338.0, 199474.0, 756565.0, 659210.0] (must be same and length>=4)
[2025-11-14 07:32:53] 2025-11-14 15:32:18,375 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2025-11-14 07:32:53] 2025-11-14 15:32:18,375 | INFO     | ..............................
[2025-11-14 07:32:53] 2025-11-14 15:32:18,375 | INFO     | . Timing measurements:
[2025-11-14 07:32:53] 2025-11-14 15:32:18,375 | INFO     | . get job = 0 s
[2025-11-14 07:32:53] 2025-11-14 15:32:18,375 | INFO     | . initial setup = 4 s
[2025-11-14 07:32:53] 2025-11-14 15:32:18,375 | INFO     | . payload setup = 30 s
[2025-11-14 07:32:53] 2025-11-14 15:32:18,375 | INFO     | . stage-in = 0 s
[2025-11-14 07:32:53] 2025-11-14 15:32:18,375 | INFO     | . payload execution = 269 s
[2025-11-14 07:32:53] 2025-11-14 15:32:18,376 | INFO     | . stage-out = 1 s
[2025-11-14 07:32:53] 2025-11-14 15:32:18,376 | INFO     | . log creation = 0 s
[2025-11-14 07:32:53] 2025-11-14 15:32:18,376 | INFO     | ..............................
[2025-11-14 07:32:53] 2025-11-14 15:32:18,376 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-14 07:32:53] 2025-11-14 15:32:18,376 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6886206117/pilotlog.txt
[2025-11-14 07:32:53] [end log extracts]
[2025-11-14 07:32:53] 2025-11-14 15:32:18,395 | WARNING  | pilotErrorCodes = [1305, 1165] (will report primary/first error code)
[2025-11-14 07:32:53] 2025-11-14 15:32:18,395 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-11-14 07:32:53] 2025-11-14 15:32:19,076 | INFO     | 
[2025-11-14 07:32:53] 2025-11-14 15:32:19,088 | INFO     | job summary report
[2025-11-14 07:32:53] 2025-11-14 15:32:19,088 | INFO     | --------------------------------------------------
[2025-11-14 07:32:53] 2025-11-14 15:32:19,088 | INFO     | PanDA job id: 6886206117
[2025-11-14 07:32:53] 2025-11-14 15:32:19,088 | INFO     | task id: 47450870
[2025-11-14 07:32:53] 2025-11-14 15:32:19,088 | INFO     | error 1/2: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-11-14 07:29:50,381 CRITICAL Transform executor raised TransformValidationExceptio
[2025-11-14 07:32:53] 2025-11-14 15:32:19,088 | INFO     | error 2/2: 1165: Local output file is missing
[2025-11-14 07:32:53] 2025-11-14 15:32:19,088 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-14 07:32:53] 2025-11-14 15:32:19,088 | INFO     | pilot state: failed 
[2025-11-14 07:32:53] 2025-11-14 15:32:19,088 | INFO     | transexitcode: 65
[2025-11-14 07:32:53] 2025-11-14 15:32:19,088 | INFO     | exeerrorcode: 65
[2025-11-14 07:32:53] 2025-11-14 15:32:19,088 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: "IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFL
[2025-11-14 07:32:53] 2025-11-14 15:32:19,089 | INFO     | exitcode: 65
[2025-11-14 07:32:53] 2025-11-14 15:32:19,089 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: "IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 
[2025-11-14 07:32:53] 2025-11-14 15:32:19,089 | INFO     | cpuconsumptiontime: 80 s
[2025-11-14 07:32:53] 2025-11-14 15:32:19,089 | INFO     | nevents: 0
[2025-11-14 07:32:53] 2025-11-14 15:32:19,089 | INFO     | neventsw: 0
[2025-11-14 07:32:53] 2025-11-14 15:32:19,089 | INFO     | pid: 1430921
[2025-11-14 07:32:53] 2025-11-14 15:32:19,089 | INFO     | pgrp: 1430921
[2025-11-14 07:32:53] 2025-11-14 15:32:19,089 | INFO     | corecount: 8
[2025-11-14 07:32:53] 2025-11-14 15:32:19,089 | INFO     | event service: False
[2025-11-14 07:32:53] 2025-11-14 15:32:19,089 | INFO     | sizes: {0: 2298670, 1: 2298869, 2: 2298869, 13: 2298897, 24: 2298953, 35: 2298981, 36: 2299399, 46: 2299427, 304: 2323045, 305: 2323049, 307: 2327395, 309: 2327731
[2025-11-14 07:32:53] 2025-11-14 15:32:19,089 | INFO     | --------------------------------------------------
[2025-11-14 07:32:53] 2025-11-14 15:32:19,089 | INFO     | 
[2025-11-14 07:32:53] 2025-11-14 15:32:19,089 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-11-14 07:32:53] 2025-11-14 15:32:19,279 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-14 07:32:53] 2025-11-14 15:32:19,280 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-14 07:32:53] 2025-11-14 15:32:19,280 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-14 07:32:53] 2025-11-14 15:32:19,280 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-14 07:32:53] 2025-11-14 15:32:19,280 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-14 07:32:53] 2025-11-14 15:32:19,280 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-14 07:32:53] 2025-11-14 15:32:19,280 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-14 07:32:53] 2025-11-14 15:32:19,280 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-14 07:32:53] 2025-11-14 15:32:19,280 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-14 07:32:53] 2025-11-14 15:32:19,280 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-14 07:32:53] 2025-11-14 15:32:19,280 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-14 07:32:53] 2025-11-14 15:32:19,280 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-14 07:32:53] 2025-11-14 15:32:19,280 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-14 07:32:53] 2025-11-14 15:32:19,280 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-14 07:32:53] 2025-11-14 15:32:19,281 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-14 07:32:53] 2025-11-14 15:32:19,281 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-14 07:32:53] 2025-11-14 15:32:19,281 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-14 07:32:53] 2025-11-14 15:32:19,281 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-14 07:32:53] 2025-11-14 15:32:19,281 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-14 07:32:53] 2025-11-14 15:32:19,281 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-14 07:32:53] 2025-11-14 15:32:19,281 | INFO     | job 6886206117 has completed (purged errors)
[2025-11-14 07:32:53] 2025-11-14 15:32:19,281 | INFO     | overall cleanup function is called
[2025-11-14 07:32:53] 2025-11-14 15:32:20,331 | INFO     | --- collectZombieJob: --- 10, [1430921]
[2025-11-14 07:32:53] 2025-11-14 15:32:20,331 | INFO     | zombie collector waiting for pid 1430921
[2025-11-14 07:32:53] 2025-11-14 15:32:20,331 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-14 07:32:53] 2025-11-14 15:32:20,331 | INFO     | collected zombie processes
[2025-11-14 07:32:53] 2025-11-14 15:32:20,331 | INFO     | will attempt to kill all subprocesses of pid=1430921
[2025-11-14 07:32:53] 2025-11-14 15:32:20,745 | INFO     | process IDs to be killed: [1430921] (in reverse order)
[2025-11-14 07:32:53] 2025-11-14 15:32:20,817 | WARNING  | found no corresponding commands to process id(s)
[2025-11-14 07:32:53] 2025-11-14 15:32:20,817 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-14 07:32:53] 2025-11-14 15:32:20,826 | INFO     | did not find any defunct processes belonging to 1430921
[2025-11-14 07:32:53] 2025-11-14 15:32:20,835 | INFO     | did not find any defunct processes belonging to 1430921
[2025-11-14 07:32:53] 2025-11-14 15:32:20,836 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-14 07:32:53] 2025-11-14 15:32:20,836 | INFO     | ready for new job
[2025-11-14 07:32:53] 2025-11-14 15:32:20,836 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-14 07:32:53] 2025-11-14 15:32:20,838 | INFO     | ***************************************
[2025-11-14 07:32:53] 2025-11-14 15:32:20,838 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-14 07:32:53] 2025-11-14 15:32:20,838 | INFO     | ***************************************
[2025-11-14 07:32:53] 2025-11-14 15:32:20,838 | INFO     | 
[2025-11-14 07:32:53] 2025-11-14 15:32:20,848 | INFO     | architecture information:
[2025-11-14 07:32:53] 2025-11-14 15:32:20,857 | INFO     | executing command: cat /etc/os-release
[2025-11-14 07:32:53] 2025-11-14 15:32:20,868 | INFO     | cat /etc/os-release:
[2025-11-14 07:32:53] NAME="CentOS Linux"
[2025-11-14 07:32:53] VERSION="7 (Core)"
[2025-11-14 07:32:53] ID="centos"
[2025-11-14 07:32:53] ID_LIKE="rhel fedora"
[2025-11-14 07:32:53] VERSION_ID="7"
[2025-11-14 07:32:53] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-14 07:32:53] ANSI_COLOR="0;31"
[2025-11-14 07:32:53] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-14 07:32:53] HOME_URL="https://www.centos.org/"
[2025-11-14 07:32:53] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-14 07:32:53] 
[2025-11-14 07:32:53] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-14 07:32:53] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-14 07:32:53] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-14 07:32:53] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-14 07:32:53] 
[2025-11-14 07:32:53] 2025-11-14 15:32:20,868 | INFO     | ***************************************
[2025-11-14 07:32:53] 2025-11-14 15:32:21,372 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-11-14 07:32:53] 2025-11-14 15:32:21,452 | INFO     | sufficient remaining disk space (1279230214144 B)
[2025-11-14 07:32:53] 2025-11-14 15:32:21,453 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-14 07:32:53] 2025-11-14 15:32:21,453 | INFO     | current server update state: UPDATING_FINAL
[2025-11-14 07:32:53] 2025-11-14 15:32:21,453 | INFO     | update_server=False
[2025-11-14 07:32:53] 2025-11-14 15:32:21,453 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-14 07:32:53] 2025-11-14 15:32:21,626 | INFO     | all data control threads have been joined
[2025-11-14 07:32:53] 2025-11-14 15:32:21,793 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-14 07:32:53] 2025-11-14 15:32:21,793 | INFO     | aborting loop
[2025-11-14 07:32:53] 2025-11-14 15:32:22,028 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-14 07:32:53] 2025-11-14 15:32:22,035 | INFO     | all job control threads have been joined
[2025-11-14 07:32:53] 2025-11-14 15:32:22,463 | INFO     | [job] retrieve thread has finished
[2025-11-14 07:32:53] 2025-11-14 15:32:22,612 | INFO     | [payload] validate_pre thread has finished
[2025-11-14 07:32:53] 2025-11-14 15:32:22,633 | INFO     | [data] control thread has finished
[2025-11-14 07:32:53] 2025-11-14 15:32:22,673 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-14 07:32:53] 2025-11-14 15:32:22,789 | INFO     | [job] validate thread has finished
[2025-11-14 07:32:53] 2025-11-14 15:32:22,799 | INFO     | [job] job monitor thread has finished
[2025-11-14 07:32:53] 2025-11-14 15:32:22,803 | INFO     | [payload] validate_post thread has finished
[2025-11-14 07:32:53] 2025-11-14 15:32:22,947 | INFO     | all payload control threads have been joined
[2025-11-14 07:32:53] 2025-11-14 15:32:23,042 | INFO     | [job] control thread has finished
[2025-11-14 07:32:53] 2025-11-14 15:32:23,191 | INFO     | [job] create_data_payload thread has finished
[2025-11-14 07:32:53] 2025-11-14 15:32:23,202 | INFO     | [payload] execute_payloads thread has finished
[2025-11-14 07:32:53] 2025-11-14 15:32:23,286 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-14 07:32:53] 2025-11-14 15:32:23,294 | INFO     | [data] copytool_in thread has finished
[2025-11-14 07:32:53] 2025-11-14 15:32:23,768 | INFO     | [payload] failed_post thread has finished
[2025-11-14 07:32:53] 2025-11-14 15:32:23,953 | INFO     | [payload] control thread has finished
[2025-11-14 07:32:53] 2025-11-14 15:32:24,036 | INFO     | [data] copytool_out thread has finished
[2025-11-14 07:32:53] 2025-11-14 15:32:24,088 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-14 07:32:53] 2025-11-14 15:32:25,094 | INFO     | [job] queue monitor thread has finished
[2025-11-14 07:32:53] 2025-11-14 15:32:26,682 | INFO     | [data] queue_monitor thread has finished
[2025-11-14 07:32:53] 2025-11-14 15:32:47,655 | INFO     | [monitor] cgroup control has ended
[2025-11-14 07:32:53] 2025-11-14 15:32:48,210 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140438966548288)>', '<ExcThread(monitor, started 140438442862336)>']
[2025-11-14 07:32:53] 2025-11-14 15:32:51,687 | INFO     | PID=1415902 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-14 07:32:53] 2025-11-14 15:32:51,716 | INFO     | .. there are 33 such processes running
[2025-11-14 07:32:53] 2025-11-14 15:32:51,716 | INFO     | found 0 job(s) in 20 queues
[2025-11-14 07:32:53] 2025-11-14 15:32:51,717 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-14 07:32:53] 2025-11-14 15:32:51,717 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-14 07:32:53] 2025-11-14 15:32:51,717 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-14 07:32:53] 2025-11-14 15:32:51,717 | INFO     | [monitor] control thread has ended
[2025-11-14 07:32:53] 2025-11-14 15:32:53,237 | INFO     | all workflow threads have been joined
[2025-11-14 07:32:53] 2025-11-14 15:32:53,237 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-14 07:32:53] 2025-11-14 15:32:53,237 | INFO     | traces error code: 0
[2025-11-14 07:32:53] 2025-11-14 15:32:53,238 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-14 07:32:53] 2025-11-14 15:32:53,504 [wrapper] ==== pilot stdout END ====
[2025-11-14 07:32:53] 2025-11-14 15:32:53,516 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-14 07:32:53] 2025-11-14 15:32:53,585 [wrapper] pilotpid: 1415902
[2025-11-14 07:32:53] 2025-11-14 15:32:53,629 [wrapper] Pilot exit status: 0
[2025-11-14 07:32:53] 2025-11-14 15:32:53,656 [wrapper] pandaids: 6886206117
[2025-11-14 07:32:53] 2025-11-14 15:32:53,703 [wrapper] cleanup supervisor_pilot 1415908 1415903
[2025-11-14 07:32:53] 2025-11-14 15:32:53,706 [wrapper] Test setup, not cleaning
[2025-11-14 07:32:53] 2025-11-14 15:32:53,707 [wrapper] apfmon messages muted
[2025-11-14 07:32:53] 2025-11-14 15:32:53,709 [wrapper] ==== wrapper stdout END ====
[2025-11-14 07:32:53] 2025-11-14 15:32:53,736 [wrapper] ==== wrapper stderr END ====
[2025-11-14 07:32:53]  *** Error codes and diagnostics ***
[2025-11-14 07:32:53]     "exeErrorCode": 65,
[2025-11-14 07:32:53]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: \"IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 cannot be opened - STOP\"",
[2025-11-14 07:32:53]     "pilotErrorCode": 1305,
[2025-11-14 07:32:53]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: \"IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 canno",
[2025-11-14 07:32:53]  *** Listing of results directory ***
[2025-11-14 07:32:53] total 377548
[2025-11-14 07:32:53] -rw-r--r--. 1 boinc boinc    576529 Nov 14 06:59 pilot3.tar.gz
[2025-11-14 07:32:53] -rw-r--r--. 1 boinc boinc      5112 Nov 14 07:00 queuedata.json
[2025-11-14 07:32:53] -rwx------. 1 boinc boinc     36292 Nov 14 07:02 runpilot2-wrapper.sh
[2025-11-14 07:32:53] -rw-r--r--. 1 boinc boinc       100 Nov 14 07:22 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-14 07:32:53] -rwxr-xr-x. 1 boinc boinc      7986 Nov 14 07:22 run_atlas
[2025-11-14 07:32:53] -rw-r--r--. 1 boinc boinc       105 Nov 14 07:22 job.xml
[2025-11-14 07:32:53] -rw-r--r--. 2 boinc boinc 382331634 Nov 14 07:23 EVNT.14545720._000246.pool.root.1
[2025-11-14 07:32:53] -rw-r--r--. 1 boinc boinc      6443 Nov 14 07:23 init_data.xml
[2025-11-14 07:32:53] -rw-r--r--. 2 boinc boinc     15120 Nov 14 07:23 start_atlas.sh
[2025-11-14 07:32:53] drwxrwx--x. 2 boinc boinc      4096 Nov 14 07:23 shared
[2025-11-14 07:32:53] -rw-r--r--. 2 boinc boinc    590123 Nov 14 07:23 input.tar.gz
[2025-11-14 07:32:53] -rw-r--r--. 1 boinc boinc         0 Nov 14 07:23 boinc_lockfile
[2025-11-14 07:32:53] -rw-r--r--. 1 boinc boinc      2930 Nov 14 07:23 pandaJob.out
[2025-11-14 07:32:53] -rw-------. 1 boinc boinc    988602 Nov 14 07:23 agis_schedconf.cvmfs.json
[2025-11-14 07:32:53] -rw-------. 1 boinc boinc   1526297 Nov 14 07:23 agis_ddmendpoints.agis.ALL.json
[2025-11-14 07:32:53] drwx------. 5 boinc boinc      4096 Nov 14 07:23 pilot3
[2025-11-14 07:32:53] -rw-r--r--. 1 boinc boinc       525 Nov 14 07:28 boinc_task_state.xml
[2025-11-14 07:32:53] -rw-------. 1 boinc boinc      1000 Nov 14 07:29 memory_monitor_summary.json
[2025-11-14 07:32:53] -rw-------. 1 boinc boinc     52939 Nov 14 07:30 log.47450870._002277.job.log.tgz.1
[2025-11-14 07:32:53] -rw-------. 1 boinc boinc        95 Nov 14 07:31 pilot_heartbeat.json
[2025-11-14 07:32:53] -rw-------. 1 boinc boinc      9881 Nov 14 07:32 heartbeat.json
[2025-11-14 07:32:53] -rw-r--r--. 1 boinc boinc      8192 Nov 14 07:32 boinc_mmap_file
[2025-11-14 07:32:53] -rw-r--r--. 1 boinc boinc        23 Nov 14 07:32 wrapper_checkpoint.txt
[2025-11-14 07:32:53] -rw-------. 1 boinc boinc      4823 Nov 14 07:32 pilotlog.txt
[2025-11-14 07:32:53] -rw-------. 1 boinc boinc    128228 Nov 14 07:32 log.47450870._002277.job.log.1
[2025-11-14 07:32:53] -rw-------. 1 boinc boinc       186 Nov 14 07:32 output.list
[2025-11-14 07:32:53] -rw-r--r--. 1 boinc boinc       620 Nov 14 07:32 runtime_log
[2025-11-14 07:32:53] -rw-------. 1 boinc boinc    204800 Nov 14 07:32 result.tar.gz
[2025-11-14 07:32:53] -rw-------. 1 boinc boinc       647 Nov 14 07:32 SFQNDmnUAe8n9Rq4apOajLDm4fhM0noT9bVof3QYDm8wqMDmZAfa2n.diag
[2025-11-14 07:32:53] -rw-r--r--. 1 boinc boinc      8526 Nov 14 07:32 runtime_log.err
[2025-11-14 07:32:53] -rw-r--r--. 1 boinc boinc     21957 Nov 14 07:32 stderr.txt
[2025-11-14 07:32:53] No HITS result produced
[2025-11-14 07:32:53]  *** Contents of shared directory: ***
[2025-11-14 07:32:53] total 374168
[2025-11-14 07:32:53] -rw-r--r--. 2 boinc boinc 382331634 Nov 14 07:23 ATLAS.root_0
[2025-11-14 07:32:53] -rw-r--r--. 2 boinc boinc     15120 Nov 14 07:23 start_atlas.sh
[2025-11-14 07:32:53] -rw-r--r--. 2 boinc boinc    590123 Nov 14 07:23 input.tar.gz
[2025-11-14 07:32:53] -rw-------. 1 boinc boinc    204800 Nov 14 07:32 result.tar.gz
07:32:54 (1411058): run_atlas exited; CPU time 86.769198
07:32:54 (1411058): called boinc_finish(0)

</stderr_txt>
]]>

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