Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
16:34:04 (1313191): wrapper (7.7.26015): starting
16:34:04 (1313191): wrapper: running run_atlas (--nthreads 4)
[2025-11-14 16:34:04] Arguments: --nthreads 4
[2025-11-14 16:34:04] Threads: 4
[2025-11-14 16:34:04] Checking for CVMFS
[2025-11-14 16:34:05] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-14 16:34:06] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-14 16:34:06] Running cvmfs_config stat atlas.cern.ch
[2025-11-14 16:34:06] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-14 16:34:06] 2.9.2.0 1313387 0 29560 152860 3 1 32212817 36864000 0 130560 0 0 0.000 1292 19575 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-11-14 16:34:06] CVMFS is ok
[2025-11-14 16:34:06] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-14 16:34:06] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-14 16:34:06] Further information can be found at the LHC@home message board.
[2025-11-14 16:34:06] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-14 16:34:06] Checking for apptainer binary...
[2025-11-14 16:34:06] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-14 16:34:06] Running /usr/bin/apptainer --version
[2025-11-14 16:34:06] apptainer version 1.4.1-1.1
[2025-11-14 16:34:06] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-14 16:34:06] atlasA139
[2025-11-14 16:34:06] apptainer works
[2025-11-14 16:34:06] Set ATHENA_PROC_NUMBER=4
[2025-11-14 16:34:06] Set ATHENA_CORE_NUMBER=4
[2025-11-14 16:34:06] Starting ATLAS job with PandaID=6886214217
[2025-11-14 16:34:06] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-14 20:49:42]  *** The last 200 lines of the pilot log: ***
[2025-11-14 20:49:42] 2025-11-14 19:48:54,966 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-14 20:49:42] 2025-11-14 19:48:54,968 | INFO     | fitting pss+swap vs Time
[2025-11-14 20:49:42] 2025-11-14 19:48:54,968 | INFO     | sum of square deviations: 4844974562.5
[2025-11-14 20:49:42] 2025-11-14 19:48:54,969 | INFO     | sum of deviations: 124952559027.00012
[2025-11-14 20:49:42] 2025-11-14 19:48:54,969 | INFO     | mean x: 1763142076.5
[2025-11-14 20:49:42] 2025-11-14 19:48:54,969 | INFO     | mean y: 2705951.352
[2025-11-14 20:49:42] 2025-11-14 19:48:54,969 | INFO     | intersect: -45468970224.62665
[2025-11-14 20:49:42] 2025-11-14 19:48:54,969 | INFO     | chi2: 4.3317617786710185
[2025-11-14 20:49:42] 2025-11-14 19:48:54,969 | INFO     | sum of square deviations: 4560048290.0
[2025-11-14 20:49:42] 2025-11-14 19:48:54,970 | INFO     | sum of deviations: 156233710692.0
[2025-11-14 20:49:42] 2025-11-14 19:48:54,970 | INFO     | mean x: 1763141924.0
[2025-11-14 20:49:42] 2025-11-14 19:48:54,970 | INFO     | mean y: 2722485.4571428574
[2025-11-14 20:49:42] 2025-11-14 19:48:54,970 | INFO     | intersect: -60405016149.07215
[2025-11-14 20:49:42] 2025-11-14 19:48:54,970 | INFO     | chi2: 3.132415766098856
[2025-11-14 20:49:42] 2025-11-14 19:48:54,970 | INFO     | current chi2=3.132415766098856 (change=27.68725691420919 %)
[2025-11-14 20:49:42] 2025-11-14 19:48:54,970 | INFO     | sum of square deviations: 4286517580.0
[2025-11-14 20:49:42] 2025-11-14 19:48:54,971 | INFO     | sum of deviations: 151120964002.5
[2025-11-14 20:49:42] 2025-11-14 19:48:54,971 | INFO     | mean x: 1763141771.5
[2025-11-14 20:49:42] 2025-11-14 19:48:54,971 | INFO     | mean y: 2719634.8291666666
[2025-11-14 20:49:42] 2025-11-14 19:48:54,971 | INFO     | intersect: -62156755792.34395
[2025-11-14 20:49:42] 2025-11-14 19:48:54,971 | INFO     | chi2: 3.132113974545411
[2025-11-14 20:49:42] 2025-11-14 19:48:54,971 | INFO     | current chi2=3.132113974545411 (change=0.009634466685779428 %)
[2025-11-14 20:49:42] 2025-11-14 19:48:54,971 | INFO     | right removable region: 239
[2025-11-14 20:49:42] 2025-11-14 19:48:54,971 | INFO     | sum of square deviations: 4560048290.0
[2025-11-14 20:49:42] 2025-11-14 19:48:54,972 | INFO     | sum of deviations: 51737297620.00005
[2025-11-14 20:49:42] 2025-11-14 19:48:54,972 | INFO     | mean x: 1763142229.0
[2025-11-14 20:49:42] 2025-11-14 19:48:54,972 | INFO     | mean y: 2745059.330612245
[2025-11-14 20:49:42] 2025-11-14 19:48:54,972 | INFO     | intersect: -20001476046.881245
[2025-11-14 20:49:42] 2025-11-14 19:48:54,972 | INFO     | chi2: 1.692619187276093
[2025-11-14 20:49:42] 2025-11-14 19:48:54,972 | INFO     | current chi2=1.692619187276093 (change=60.925386164809204 %)
[2025-11-14 20:49:42] 2025-11-14 19:48:54,972 | INFO     | sum of square deviations: 4286517580.0
[2025-11-14 20:49:42] 2025-11-14 19:48:54,973 | INFO     | sum of deviations: 27813019357.000053
[2025-11-14 20:49:42] 2025-11-14 19:48:54,973 | INFO     | mean x: 1763142381.5
[2025-11-14 20:49:42] 2025-11-14 19:48:54,973 | INFO     | mean y: 2758273.0833333335
[2025-11-14 20:49:42] 2025-11-14 19:48:54,973 | INFO     | intersect: -11437370519.251322
[2025-11-14 20:49:42] 2025-11-14 19:48:54,973 | INFO     | chi2: 1.2530177915270433
[2025-11-14 20:49:42] 2025-11-14 19:48:54,973 | INFO     | current chi2=1.2530177915270433 (change=25.971665632391517 %)
[2025-11-14 20:49:42] 2025-11-14 19:48:54,973 | INFO     | sum of square deviations: 4024149870.0
[2025-11-14 20:49:42] 2025-11-14 19:48:54,974 | INFO     | sum of deviations: 23475058036.999992
[2025-11-14 20:49:42] 2025-11-14 19:48:54,974 | INFO     | mean x: 1763142534.0
[2025-11-14 20:49:42] 2025-11-14 19:48:54,974 | INFO     | mean y: 2760791.8127659573
[2025-11-14 20:49:42] 2025-11-14 19:48:54,974 | INFO     | intersect: -10282609944.927025
[2025-11-14 20:49:42] 2025-11-14 19:48:54,974 | INFO     | chi2: 1.2518320215868344
[2025-11-14 20:49:42] 2025-11-14 19:48:54,974 | INFO     | current chi2=1.2518320215868344 (change=0.09463312877336123 %)
[2025-11-14 20:49:42] 2025-11-14 19:48:54,974 | INFO     | left removable region: 30
[2025-11-14 20:49:42] 2025-11-14 19:48:54,974 | INFO     | sum of square deviations: 2830787960.0
[2025-11-14 20:49:42] 2025-11-14 19:48:54,975 | INFO     | sum of deviations: 40867508881.99999
[2025-11-14 20:49:42] 2025-11-14 19:48:54,975 | INFO     | mean x: 1763142656.0
[2025-11-14 20:49:42] 2025-11-14 19:48:54,975 | INFO     | mean y: 2784906.2057416267
[2025-11-14 20:49:42] 2025-11-14 19:48:54,975 | INFO     | intersect: -25451346301.245438
[2025-11-14 20:49:42] 2025-11-14 19:48:54,975 | INFO     | chi2: 0.0184155137678994
[2025-11-14 20:49:42] 2025-11-14 19:48:54,975 | INFO     | current memory leak: 14.44 B/s (using 209 data points, chi2=0.02)
[2025-11-14 20:49:42] 2025-11-14 19:48:54,975 | INFO     | could have reported an average CPU frequency of 3674 MHz (12 samples)
[2025-11-14 20:49:42] 2025-11-14 19:48:54,975 | INFO     | ..............................
[2025-11-14 20:49:42] 2025-11-14 19:48:54,975 | INFO     | . Timing measurements:
[2025-11-14 20:49:42] 2025-11-14 19:48:54,975 | INFO     | . get job = 0 s
[2025-11-14 20:49:42] 2025-11-14 19:48:54,975 | INFO     | . initial setup = 1 s
[2025-11-14 20:49:42] 2025-11-14 19:48:54,975 | INFO     | . payload setup = 7 s
[2025-11-14 20:49:42] 2025-11-14 19:48:54,975 | INFO     | . stage-in = 0 s
[2025-11-14 20:49:42] 2025-11-14 19:48:54,975 | INFO     | . payload execution = 15242 s
[2025-11-14 20:49:42] 2025-11-14 19:48:54,976 | INFO     | . stage-out = 1 s
[2025-11-14 20:49:42] 2025-11-14 19:48:54,976 | INFO     | . log creation = 0 s
[2025-11-14 20:49:42] 2025-11-14 19:48:54,976 | INFO     | ..............................
[2025-11-14 20:49:42] 2025-11-14 19:48:55,156 | INFO     | 
[2025-11-14 20:49:42] 2025-11-14 19:48:55,156 | INFO     | job summary report
[2025-11-14 20:49:42] 2025-11-14 19:48:55,156 | INFO     | --------------------------------------------------
[2025-11-14 20:49:42] 2025-11-14 19:48:55,156 | INFO     | PanDA job id: 6886214217
[2025-11-14 20:49:42] 2025-11-14 19:48:55,156 | INFO     | task id: 47450870
[2025-11-14 20:49:42] 2025-11-14 19:48:55,157 | INFO     | errors: (none)
[2025-11-14 20:49:42] 2025-11-14 19:48:55,157 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-14 20:49:42] 2025-11-14 19:48:55,157 | INFO     | pilot state: finished 
[2025-11-14 20:49:42] 2025-11-14 19:48:55,157 | INFO     | transexitcode: 0
[2025-11-14 20:49:42] 2025-11-14 19:48:55,157 | INFO     | exeerrorcode: 0
[2025-11-14 20:49:42] 2025-11-14 19:48:55,157 | INFO     | exeerrordiag: 
[2025-11-14 20:49:42] 2025-11-14 19:48:55,157 | INFO     | exitcode: 0
[2025-11-14 20:49:42] 2025-11-14 19:48:55,157 | INFO     | exitmsg: OK
[2025-11-14 20:49:42] 2025-11-14 19:48:55,157 | INFO     | cpuconsumptiontime: 58969 s
[2025-11-14 20:49:42] 2025-11-14 19:48:55,157 | INFO     | nevents: 1000
[2025-11-14 20:49:42] 2025-11-14 19:48:55,157 | INFO     | neventsw: 0
[2025-11-14 20:49:42] 2025-11-14 19:48:55,157 | INFO     | pid: 1324787
[2025-11-14 20:49:42] 2025-11-14 19:48:55,157 | INFO     | pgrp: 1324787
[2025-11-14 20:49:42] 2025-11-14 19:48:55,157 | INFO     | corecount: 4
[2025-11-14 20:49:42] 2025-11-14 19:48:55,157 | INFO     | event service: False
[2025-11-14 20:49:42] 2025-11-14 19:48:55,157 | INFO     | sizes: {0: 2298847, 4: 2299109, 11: 2299137, 15254: 2350083, 15255: 2359083, 15258: 2359139, 15265: 2359541}
[2025-11-14 20:49:42] 2025-11-14 19:48:55,157 | INFO     | --------------------------------------------------
[2025-11-14 20:49:42] 2025-11-14 19:48:55,157 | INFO     | 
[2025-11-14 20:49:42] 2025-11-14 19:48:55,157 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-11-14 20:49:42] 2025-11-14 19:48:55,179 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-14 20:49:42] 2025-11-14 19:48:55,179 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-14 20:49:42] 2025-11-14 19:48:55,179 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-14 20:49:42] 2025-11-14 19:48:55,179 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-14 20:49:42] 2025-11-14 19:48:55,179 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-14 20:49:42] 2025-11-14 19:48:55,180 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-14 20:49:42] 2025-11-14 19:48:55,180 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-14 20:49:42] 2025-11-14 19:48:55,180 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-14 20:49:42] 2025-11-14 19:48:55,180 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-14 20:49:42] 2025-11-14 19:48:55,180 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-14 20:49:42] 2025-11-14 19:48:55,180 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-14 20:49:42] 2025-11-14 19:48:55,180 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-14 20:49:42] 2025-11-14 19:48:55,180 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-14 20:49:42] 2025-11-14 19:48:55,180 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-14 20:49:42] 2025-11-14 19:48:55,180 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-14 20:49:42] 2025-11-14 19:48:55,180 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-14 20:49:42] 2025-11-14 19:48:55,180 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-14 20:49:42] 2025-11-14 19:48:55,180 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-14 20:49:42] 2025-11-14 19:48:55,180 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-14 20:49:42] 2025-11-14 19:48:55,180 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-14 20:49:42] 2025-11-14 19:48:55,180 | INFO     | job 6886214217 has completed (purged errors)
[2025-11-14 20:49:42] 2025-11-14 19:48:55,180 | INFO     | overall cleanup function is called
[2025-11-14 20:49:42] 2025-11-14 19:48:56,190 | INFO     | --- collectZombieJob: --- 10, [1324787]
[2025-11-14 20:49:42] 2025-11-14 19:48:56,190 | INFO     | zombie collector waiting for pid 1324787
[2025-11-14 20:49:42] 2025-11-14 19:48:56,190 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-14 20:49:42] 2025-11-14 19:48:56,190 | INFO     | collected zombie processes
[2025-11-14 20:49:42] 2025-11-14 19:48:56,190 | INFO     | will attempt to kill all subprocesses of pid=1324787
[2025-11-14 20:49:42] 2025-11-14 19:48:56,236 | INFO     | process IDs to be killed: [1324787] (in reverse order)
[2025-11-14 20:49:42] 2025-11-14 19:48:56,268 | WARNING  | found no corresponding commands to process id(s)
[2025-11-14 20:49:42] 2025-11-14 19:48:56,268 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-14 20:49:42] 2025-11-14 19:48:56,270 | INFO     | did not find any defunct processes belonging to 1324787
[2025-11-14 20:49:42] 2025-11-14 19:48:56,271 | INFO     | did not find any defunct processes belonging to 1324787
[2025-11-14 20:49:42] 2025-11-14 19:48:56,272 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-14 20:49:42] 2025-11-14 19:48:56,272 | INFO     | ready for new job
[2025-11-14 20:49:42] 2025-11-14 19:48:56,272 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-14 20:49:42] 2025-11-14 19:48:56,273 | INFO     | ***************************************
[2025-11-14 20:49:42] 2025-11-14 19:48:56,273 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-14 20:49:42] 2025-11-14 19:48:56,273 | INFO     | ***************************************
[2025-11-14 20:49:42] 2025-11-14 19:48:56,273 | INFO     | 
[2025-11-14 20:49:42] 2025-11-14 19:48:56,274 | INFO     | architecture information:
[2025-11-14 20:49:42] 2025-11-14 19:48:56,274 | INFO     | executing command: cat /etc/os-release
[2025-11-14 20:49:42] 2025-11-14 19:48:56,287 | INFO     | cat /etc/os-release:
[2025-11-14 20:49:42] NAME="CentOS Linux"
[2025-11-14 20:49:42] VERSION="7 (Core)"
[2025-11-14 20:49:42] ID="centos"
[2025-11-14 20:49:42] ID_LIKE="rhel fedora"
[2025-11-14 20:49:42] VERSION_ID="7"
[2025-11-14 20:49:42] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-14 20:49:42] ANSI_COLOR="0;31"
[2025-11-14 20:49:42] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-14 20:49:42] HOME_URL="https://www.centos.org/"
[2025-11-14 20:49:42] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-14 20:49:42] 
[2025-11-14 20:49:42] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-14 20:49:42] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-14 20:49:42] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-14 20:49:42] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-14 20:49:42] 
[2025-11-14 20:49:42] 2025-11-14 19:48:56,287 | INFO     | ***************************************
[2025-11-14 20:49:42] 2025-11-14 19:48:56,790 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-11-14 20:49:42] 2025-11-14 19:48:56,808 | INFO     | sufficient remaining disk space (327440924672 B)
[2025-11-14 20:49:42] 2025-11-14 19:48:56,808 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-14 20:49:42] 2025-11-14 19:48:56,808 | INFO     | current server update state: UPDATING_FINAL
[2025-11-14 20:49:42] 2025-11-14 19:48:56,808 | INFO     | update_server=False
[2025-11-14 20:49:42] 2025-11-14 19:48:56,808 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-14 20:49:42] 2025-11-14 19:48:56,809 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-14 20:49:42] 2025-11-14 19:48:56,809 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-14 20:49:42] 2025-11-14 19:48:56,809 | INFO     | aborting loop
[2025-11-14 20:49:42] 2025-11-14 19:48:57,235 | INFO     | all data control threads have been joined
[2025-11-14 20:49:42] 2025-11-14 19:48:57,246 | INFO     | all job control threads have been joined
[2025-11-14 20:49:42] 2025-11-14 19:48:57,788 | INFO     | all payload control threads have been joined
[2025-11-14 20:49:42] 2025-11-14 19:48:57,814 | INFO     | [job] retrieve thread has finished
[2025-11-14 20:49:42] 2025-11-14 19:48:57,815 | INFO     | [job] queue monitor thread has finished
[2025-11-14 20:49:42] 2025-11-14 19:48:57,815 | INFO     | [job] job monitor thread has finished
[2025-11-14 20:49:42] 2025-11-14 19:48:57,850 | INFO     | [job] create_data_payload thread has finished
[2025-11-14 20:49:42] 2025-11-14 19:48:57,944 | INFO     | [payload] validate_pre thread has finished
[2025-11-14 20:49:42] 2025-11-14 19:48:57,966 | INFO     | [payload] execute_payloads thread has finished
[2025-11-14 20:49:42] 2025-11-14 19:48:58,039 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-14 20:49:42] 2025-11-14 19:48:58,241 | INFO     | [data] control thread has finished
[2025-11-14 20:49:42] 2025-11-14 19:48:58,245 | INFO     | [data] copytool_in thread has finished
[2025-11-14 20:49:42] 2025-11-14 19:48:58,252 | INFO     | [job] control thread has finished
[2025-11-14 20:49:42] 2025-11-14 19:48:58,279 | INFO     | [payload] failed_post thread has finished
[2025-11-14 20:49:42] 2025-11-14 19:48:58,331 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-14 20:49:42] 2025-11-14 19:48:58,794 | INFO     | [payload] control thread has finished
[2025-11-14 20:49:42] 2025-11-14 19:48:58,907 | INFO     | [payload] validate_post thread has finished
[2025-11-14 20:49:42] 2025-11-14 19:48:59,239 | INFO     | [job] validate thread has finished
[2025-11-14 20:49:42] 2025-11-14 19:49:00,045 | INFO     | [data] copytool_out thread has finished
[2025-11-14 20:49:42] 2025-11-14 19:49:02,338 | INFO     | [data] queue_monitor thread has finished
[2025-11-14 20:49:42] 2025-11-14 19:49:07,540 | INFO     | job.realtimelogging is not enabled
[2025-11-14 20:49:42] 2025-11-14 19:49:08,545 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-14 20:49:42] 2025-11-14 19:49:14,308 [wrapper] supervise_pilot (15 min periods counter: 18)
[2025-11-14 20:49:42] 2025-11-14 19:49:27,467 | INFO     | PID=1317551 has CPU usage=2.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-14 20:49:42] 2025-11-14 19:49:27,467 | INFO     | found 0 job(s) in 20 queues
[2025-11-14 20:49:42] 2025-11-14 19:49:27,467 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-14 20:49:42] 2025-11-14 19:49:27,467 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-14 20:49:42] 2025-11-14 19:49:35,860 | INFO     | [monitor] cgroup control has ended
[2025-11-14 20:49:42] 2025-11-14 19:49:37,066 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140008449410880)>', '<ExcThread(monitor, started 140008168064768)>']
[2025-11-14 20:49:42] 2025-11-14 19:49:37,521 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-14 20:49:42] 2025-11-14 19:49:37,521 | INFO     | [monitor] control thread has ended
[2025-11-14 20:49:42] 2025-11-14 19:49:42,067 | INFO     | all workflow threads have been joined
[2025-11-14 20:49:42] 2025-11-14 19:49:42,067 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-14 20:49:42] 2025-11-14 19:49:42,067 | INFO     | traces error code: 0
[2025-11-14 20:49:42] 2025-11-14 19:49:42,068 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-14 20:49:42] 2025-11-14 19:49:42,140 [wrapper] ==== pilot stdout END ====
[2025-11-14 20:49:42] 2025-11-14 19:49:42,143 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-14 20:49:42] 2025-11-14 19:49:42,147 [wrapper] pilotpid: 1317551
[2025-11-14 20:49:42] 2025-11-14 19:49:42,151 [wrapper] Pilot exit status: 0
[2025-11-14 20:49:42] 2025-11-14 19:49:42,162 [wrapper] pandaids: 6886214217
[2025-11-14 20:49:42] 2025-11-14 19:49:42,186 [wrapper] cleanup supervisor_pilot 1357510 1317552
[2025-11-14 20:49:42] 2025-11-14 19:49:42,189 [wrapper] Test setup, not cleaning
[2025-11-14 20:49:42] 2025-11-14 19:49:42,193 [wrapper] apfmon messages muted
[2025-11-14 20:49:42] 2025-11-14 19:49:42,197 [wrapper] ==== wrapper stdout END ====
[2025-11-14 20:49:42] 2025-11-14 19:49:42,201 [wrapper] ==== wrapper stderr END ====
[2025-11-14 20:49:42]  *** Error codes and diagnostics ***
[2025-11-14 20:49:42]     "exeErrorCode": 0,
[2025-11-14 20:49:42]     "exeErrorDiag": "",
[2025-11-14 20:49:42]     "pilotErrorCode": 0,
[2025-11-14 20:49:42]     "pilotErrorDiag": "",
[2025-11-14 20:49:42]  *** Listing of results directory ***
[2025-11-14 20:49:42] total 932072
[2025-11-14 20:49:42] -rw-r--r-- 1 boinc boinc    576529 Nov 14 15:59 pilot3.tar.gz
[2025-11-14 20:49:42] -rw-r--r-- 1 boinc boinc      5112 Nov 14 16:00 queuedata.json
[2025-11-14 20:49:42] -rwx------ 1 boinc boinc     36292 Nov 14 16:02 runpilot2-wrapper.sh
[2025-11-14 20:49:42] -rw-r--r-- 1 boinc boinc       100 Nov 14 16:34 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-14 20:49:42] -rwxr-xr-x 1 boinc boinc      7986 Nov 14 16:34 run_atlas
[2025-11-14 20:49:42] -rw-r--r-- 1 boinc boinc       105 Nov 14 16:34 job.xml
[2025-11-14 20:49:42] -rw-r--r-- 2 boinc boinc 380870639 Nov 14 16:34 EVNT.14545720._000278.pool.root.1
[2025-11-14 20:49:42] drwxrwx--x 2 boinc boinc      4096 Nov 14 16:34 shared
[2025-11-14 20:49:42] -rw-r--r-- 2 boinc boinc    590122 Nov 14 16:34 input.tar.gz
[2025-11-14 20:49:42] -rw-r--r-- 2 boinc boinc     15120 Nov 14 16:34 start_atlas.sh
[2025-11-14 20:49:42] -rw-r--r-- 1 boinc boinc         0 Nov 14 16:34 boinc_setup_complete
[2025-11-14 20:49:42] -rw-r--r-- 1 boinc boinc      6371 Nov 14 16:34 init_data.xml
[2025-11-14 20:49:42] -rw-r--r-- 1 boinc boinc         0 Nov 14 16:34 boinc_lockfile
[2025-11-14 20:49:42] -rw-r--r-- 1 boinc boinc      2930 Nov 14 16:34 pandaJob.out
[2025-11-14 20:49:42] -rw------- 1 boinc boinc    988602 Nov 14 16:34 agis_schedconf.cvmfs.json
[2025-11-14 20:49:42] drwx------ 5 boinc boinc      4096 Nov 14 16:34 pilot3
[2025-11-14 20:49:42] -rw-r--r-- 1 boinc boinc       531 Nov 14 20:45 boinc_task_state.xml
[2025-11-14 20:49:42] -rw------- 1 boinc boinc 562853096 Nov 14 20:48 HITS.47450870._002597.pool.root.1
[2025-11-14 20:49:42] -rw------- 1 boinc boinc        95 Nov 14 20:48 pilot_heartbeat.json
[2025-11-14 20:49:42] -rw------- 1 boinc boinc      1020 Nov 14 20:48 memory_monitor_summary.json
[2025-11-14 20:49:42] -rw------- 1 boinc boinc   1526297 Nov 14 20:48 agis_ddmendpoints.agis.ALL.json
[2025-11-14 20:49:42] -rw------- 1 boinc boinc   1206850 Nov 14 20:48 log.47450870._002597.job.log.tgz.1
[2025-11-14 20:49:42] -rw------- 1 boinc boinc     27636 Nov 14 20:48 heartbeat.json
[2025-11-14 20:49:42] -rw-r--r-- 1 boinc boinc        28 Nov 14 20:49 wrapper_checkpoint.txt
[2025-11-14 20:49:42] -rw-r--r-- 1 boinc boinc      8192 Nov 14 20:49 boinc_mmap_file
[2025-11-14 20:49:42] -rw------- 1 boinc boinc      4824 Nov 14 20:49 pilotlog.txt
[2025-11-14 20:49:42] -rw------- 1 boinc boinc   2174383 Nov 14 20:49 log.47450870._002597.job.log.1
[2025-11-14 20:49:42] -rw------- 1 boinc boinc       353 Nov 14 20:49 output.list
[2025-11-14 20:49:42] -rw-r--r-- 1 boinc boinc       620 Nov 14 20:49 runtime_log
[2025-11-14 20:49:42] -rw------- 1 boinc boinc   3420160 Nov 14 20:49 result.tar.gz
[2025-11-14 20:49:42] -rw-r--r-- 1 boinc boinc      8793 Nov 14 20:49 runtime_log.err
[2025-11-14 20:49:42] -rw------- 1 boinc boinc       667 Nov 14 20:49 K9WNDmnUAe8n9Rq4apOajLDm4fhM0noT9bVof3QYDmDxqMDmd0LPzm.diag
[2025-11-14 20:49:42] -rw-r--r-- 1 boinc boinc     20992 Nov 14 20:49 stderr.txt
[2025-11-14 20:49:42] HITS file was successfully produced:
[2025-11-14 20:49:42] -rw------- 1 boinc boinc 562853096 Nov 14 20:48 shared/HITS.pool.root.1
[2025-11-14 20:49:42]  *** Contents of shared directory: ***
[2025-11-14 20:49:42] total 925552
[2025-11-14 20:49:42] -rw-r--r-- 2 boinc boinc 380870639 Nov 14 16:34 ATLAS.root_0
[2025-11-14 20:49:42] -rw-r--r-- 2 boinc boinc    590122 Nov 14 16:34 input.tar.gz
[2025-11-14 20:49:42] -rw-r--r-- 2 boinc boinc     15120 Nov 14 16:34 start_atlas.sh
[2025-11-14 20:49:42] -rw------- 1 boinc boinc 562853096 Nov 14 20:48 HITS.pool.root.1
[2025-11-14 20:49:42] -rw------- 1 boinc boinc   3420160 Nov 14 20:49 result.tar.gz
20:49:44 (1313191): run_atlas exited; CPU time 58973.989591
20:49:44 (1313191): called boinc_finish(0)

</stderr_txt>
]]>

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