Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
14:02:09 (1194573): wrapper (7.7.26015): starting
14:02:09 (1194573): wrapper: running run_atlas (--nthreads 11)
[2025-11-06 14:02:09] Arguments: --nthreads 11
[2025-11-06 14:02:09] Threads: 11
[2025-11-06 14:02:09] Checking for CVMFS
[2025-11-06 14:02:09] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-06 14:02:09] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-06 14:02:09] Running cvmfs_config stat atlas.cern.ch
[2025-11-06 14:02:09] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-06 14:02:09] 2.13.2.0 2325231 2224 169480 152551 3 546 38770085 40960001 19349 16776704 0 11768131 99.408 15381670 48105 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-06 14:02:09] CVMFS is ok
[2025-11-06 14:02:09] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-06 14:02:09] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-06 14:02:09] Further information can be found at the LHC@home message board.
[2025-11-06 14:02:09] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-06 14:02:09] Checking for apptainer binary...
[2025-11-06 14:02:09] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-06 14:02:09] Running /usr/bin/apptainer --version
[2025-11-06 14:02:10] apptainer version 1.4.3-1.el9
[2025-11-06 14:02:10] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-06 14:02:10] c-208-37.aglt2.org
[2025-11-06 14:02:10] apptainer works
[2025-11-06 14:02:10] Set ATHENA_PROC_NUMBER=11
[2025-11-06 14:02:10] Set ATHENA_CORE_NUMBER=11
[2025-11-06 14:02:10] Starting ATLAS job with PandaID=6864842057
[2025-11-06 14:02:10] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-06 14:50:51]  *** The last 200 lines of the pilot log: ***
[2025-11-06 14:50:51]  status=None
[2025-11-06 14:50:51]  status_code=0
[2025-11-06 14:50:51]  storage_token=
[2025-11-06 14:50:51]  surl=/tmp/boinchome/slots/2/PanDA_Pilot-6864842057/log.47081490._022977.job.log.tgz.1
[2025-11-06 14:50:51]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/4c/88/log.47081490._022977.job.log.tgz.1
[2025-11-06 14:50:51]  workdir=None
[2025-11-06 14:50:51] ]
[2025-11-06 14:50:51] 2025-11-06 19:50:12,297 | INFO     | transferring file log.47081490._022977.job.log.tgz.1 from /tmp/boinchome/slots/2/PanDA_Pilot-6864842057/log.47081490._022977.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-11-06 14:50:51] 2025-11-06 19:50:12,297 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/2/PanDA_Pilot-6864842057/log.47081490._022977.job.log.tgz.1 /tmp/boinchome/slots/2/log.47081490._022977.job
[2025-11-06 14:50:51] 2025-11-06 19:50:12,315 | INFO     | adding to output.list: log.47081490._022977.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/4c/88/log.47081490._022977.job.log.tg
[2025-11-06 14:50:51] 2025-11-06 19:50:12,315 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-11-06 14:50:51] 2025-11-06 19:50:12,316 | INFO     | summary of transferred files:
[2025-11-06 14:50:51] 2025-11-06 19:50:12,316 | INFO     |  -- lfn=log.47081490._022977.job.log.tgz.1, status_code=0, status=transferred
[2025-11-06 14:50:51] 2025-11-06 19:50:12,316 | INFO     | stage-out finished correctly
[2025-11-06 14:50:51] 2025-11-06 19:50:13,108 | INFO     | time since job start (2873s) is within the limit (172800.0s)
[2025-11-06 14:50:51] 2025-11-06 19:50:13,711 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-11-06 14:50:51] 2025-11-06 19:50:13,763 | INFO     | job 6864842057 has state=finished
[2025-11-06 14:50:51] 2025-11-06 19:50:13,763 | INFO     | preparing for final server update for job 6864842057 in state='finished'
[2025-11-06 14:50:51] 2025-11-06 19:50:13,856 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2025-11-06 14:50:51] 2025-11-06 19:50:13,857 | INFO     | this job has now completed (state=finished)
[2025-11-06 14:50:51] 2025-11-06 19:50:13,857 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-11-06 14:50:51] 2025-11-06 19:50:13,857 | INFO     | log transfer has been attempted: DONE
[2025-11-06 14:50:51] 2025-11-06 19:50:13,857 | INFO     | job 6864842057 has finished - writing final server update
[2025-11-06 14:50:51] 2025-11-06 19:50:13,857 | INFO     | total number of processed events: 400 (read)
[2025-11-06 14:50:51] 2025-11-06 19:50:13,857 | INFO     | executing command: lscpu
[2025-11-06 14:50:51] 2025-11-06 19:50:13,905 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-11-06 14:50:51] 2025-11-06 19:50:14,380 | INFO     | monitor loop #201: job 0:6864842057 is in state 'finished'
[2025-11-06 14:50:51] 2025-11-06 19:50:14,380 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-06 14:50:51] 2025-11-06 19:50:14,608 | INFO     | PID=1202309 has CPU usage=11.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-11-06 14:50:51] 2025-11-06 19:50:14,608 | INFO     | .. there are 25 such processes running
[2025-11-06 14:50:51] 2025-11-06 19:50:15,609 | INFO     | time since job start (2875s) is within the limit (172800.0s)
[2025-11-06 14:50:51] 2025-11-06 19:50:16,883 | INFO     | monitor loop #202: job 0:6864842057 is in state 'finished'
[2025-11-06 14:50:51] 2025-11-06 19:50:16,883 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-06 14:50:51] 2025-11-06 19:50:17,615 | INFO     | time since job start (2877s) is within the limit (172800.0s)
[2025-11-06 14:50:51] 2025-11-06 19:50:18,096 | INFO     | CPU arch script returned: x86-64-v4
[2025-11-06 14:50:51] 2025-11-06 19:50:18,100 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3787.002875000001
[2025-11-06 14:50:51] 2025-11-06 19:50:18,110 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6864842057/memory_monitor_summary.json (trf name=prmon)
[2025-11-06 14:50:51] 2025-11-06 19:50:18,110 | INFO     | extracted standard info from prmon json
[2025-11-06 14:50:51] 2025-11-06 19:50:18,110 | INFO     | extracted standard memory fields from prmon json
[2025-11-06 14:50:51] 2025-11-06 19:50:18,110 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-06 14:50:51] 2025-11-06 19:50:18,110 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-11-06 14:50:51] 2025-11-06 19:50:18,110 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-06 14:50:51] 2025-11-06 19:50:18,111 | INFO     | fitting pss+swap vs Time
[2025-11-06 14:50:51] 2025-11-06 19:50:18,111 | INFO     | sum of square deviations: 19832930.0
[2025-11-06 14:50:51] 2025-11-06 19:50:18,111 | INFO     | sum of deviations: -417519319.0
[2025-11-06 14:50:51] 2025-11-06 19:50:18,111 | INFO     | mean x: 1762457261.5
[2025-11-06 14:50:51] 2025-11-06 19:50:18,111 | INFO     | mean y: 2643020.55
[2025-11-06 14:50:51] 2025-11-06 19:50:18,111 | INFO     | -- intersect: 37105580185.56218
[2025-11-06 14:50:51] 2025-11-06 19:50:18,111 | INFO     | intersect: 37105580185.56218
[2025-11-06 14:50:51] 2025-11-06 19:50:18,111 | INFO     | chi2: 0.002030786567018238
[2025-11-06 14:50:51] 2025-11-06 19:50:18,111 | INFO     | -- intersect: 37105580185.56218
[2025-11-06 14:50:51] 2025-11-06 19:50:18,111 | INFO     | current memory leak: -21.05 B/s (using 40 data points, chi2=0.00)
[2025-11-06 14:50:51] 2025-11-06 19:50:18,112 | INFO     | could have reported an average CPU frequency of 3791 MHz (5 samples)
[2025-11-06 14:50:51] 2025-11-06 19:50:18,112 | INFO     | ..............................
[2025-11-06 14:50:51] 2025-11-06 19:50:18,112 | INFO     | . Timing measurements:
[2025-11-06 14:50:51] 2025-11-06 19:50:18,112 | INFO     | . get job = 0 s
[2025-11-06 14:50:51] 2025-11-06 19:50:18,112 | INFO     | . initial setup = 2 s
[2025-11-06 14:50:51] 2025-11-06 19:50:18,112 | INFO     | . payload setup = 5 s
[2025-11-06 14:50:51] 2025-11-06 19:50:18,112 | INFO     | . stage-in = 0 s
[2025-11-06 14:50:51] 2025-11-06 19:50:18,112 | INFO     | . payload execution = 2845 s
[2025-11-06 14:50:51] 2025-11-06 19:50:18,112 | INFO     | . stage-out = 0 s
[2025-11-06 14:50:51] 2025-11-06 19:50:18,112 | INFO     | . log creation = 0 s
[2025-11-06 14:50:51] 2025-11-06 19:50:18,112 | INFO     | ..............................
[2025-11-06 14:50:51] 2025-11-06 19:50:18,636 | INFO     | 
[2025-11-06 14:50:51] 2025-11-06 19:50:18,637 | INFO     | job summary report
[2025-11-06 14:50:51] 2025-11-06 19:50:18,637 | INFO     | --------------------------------------------------
[2025-11-06 14:50:51] 2025-11-06 19:50:18,637 | INFO     | PanDA job id: 6864842057
[2025-11-06 14:50:51] 2025-11-06 19:50:18,637 | INFO     | task id: 47081490
[2025-11-06 14:50:51] 2025-11-06 19:50:18,637 | INFO     | errors: (none)
[2025-11-06 14:50:51] 2025-11-06 19:50:18,637 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-06 14:50:51] 2025-11-06 19:50:18,637 | INFO     | pilot state: finished 
[2025-11-06 14:50:51] 2025-11-06 19:50:18,637 | INFO     | transexitcode: 0
[2025-11-06 14:50:51] 2025-11-06 19:50:18,637 | INFO     | exeerrorcode: 0
[2025-11-06 14:50:51] 2025-11-06 19:50:18,637 | INFO     | exeerrordiag: 
[2025-11-06 14:50:51] 2025-11-06 19:50:18,637 | INFO     | exitcode: 0
[2025-11-06 14:50:51] 2025-11-06 19:50:18,637 | INFO     | exitmsg: OK
[2025-11-06 14:50:51] 2025-11-06 19:50:18,637 | INFO     | cpuconsumptiontime: 20450 s
[2025-11-06 14:50:51] 2025-11-06 19:50:18,637 | INFO     | nevents: 400
[2025-11-06 14:50:51] 2025-11-06 19:50:18,637 | INFO     | neventsw: 0
[2025-11-06 14:50:51] 2025-11-06 19:50:18,637 | INFO     | pid: 1238251
[2025-11-06 14:50:51] 2025-11-06 19:50:18,637 | INFO     | pgrp: 1238251
[2025-11-06 14:50:51] 2025-11-06 19:50:18,637 | INFO     | corecount: 11
[2025-11-06 14:50:51] 2025-11-06 19:50:18,637 | INFO     | event service: False
[2025-11-06 14:50:51] 2025-11-06 19:50:18,638 | INFO     | sizes: {0: 2348886, 5: 2349148, 11: 2349204, 2855: 2374695, 2856: 2383721, 2858: 2383777, 2862: 2384131}
[2025-11-06 14:50:51] 2025-11-06 19:50:18,638 | INFO     | --------------------------------------------------
[2025-11-06 14:50:51] 2025-11-06 19:50:18,638 | INFO     | 
[2025-11-06 14:50:51] 2025-11-06 19:50:18,638 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-11-06 14:50:51] 2025-11-06 19:50:18,657 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-06 14:50:51] 2025-11-06 19:50:18,658 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-06 14:50:51] 2025-11-06 19:50:18,658 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-06 14:50:51] 2025-11-06 19:50:18,658 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-06 14:50:51] 2025-11-06 19:50:18,658 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-06 14:50:51] 2025-11-06 19:50:18,658 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-06 14:50:51] 2025-11-06 19:50:18,658 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-06 14:50:51] 2025-11-06 19:50:18,658 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-06 14:50:51] 2025-11-06 19:50:18,658 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-06 14:50:51] 2025-11-06 19:50:18,658 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-06 14:50:51] 2025-11-06 19:50:18,658 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-06 14:50:51] 2025-11-06 19:50:18,658 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-06 14:50:51] 2025-11-06 19:50:18,658 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-06 14:50:51] 2025-11-06 19:50:18,658 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-06 14:50:51] 2025-11-06 19:50:18,658 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-06 14:50:51] 2025-11-06 19:50:18,658 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-06 14:50:51] 2025-11-06 19:50:18,658 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-06 14:50:51] 2025-11-06 19:50:18,658 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-06 14:50:51] 2025-11-06 19:50:18,658 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-06 14:50:51] 2025-11-06 19:50:18,658 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-06 14:50:51] 2025-11-06 19:50:18,658 | INFO     | job 6864842057 has completed (purged errors)
[2025-11-06 14:50:51] 2025-11-06 19:50:18,658 | INFO     | overall cleanup function is called
[2025-11-06 14:50:51] 2025-11-06 19:50:19,665 | INFO     | --- collectZombieJob: --- 10, [1238251]
[2025-11-06 14:50:51] 2025-11-06 19:50:19,666 | INFO     | zombie collector waiting for pid 1238251
[2025-11-06 14:50:51] 2025-11-06 19:50:19,666 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-06 14:50:51] 2025-11-06 19:50:19,666 | INFO     | collected zombie processes
[2025-11-06 14:50:51] 2025-11-06 19:50:19,666 | INFO     | will attempt to kill all subprocesses of pid=1238251
[2025-11-06 14:50:51] 2025-11-06 19:50:19,970 | INFO     | process IDs to be killed: [1238251] (in reverse order)
[2025-11-06 14:50:51] 2025-11-06 19:50:20,103 | WARNING  | found no corresponding commands to process id(s)
[2025-11-06 14:50:51] 2025-11-06 19:50:20,103 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-06 14:50:51] 2025-11-06 19:50:20,125 | INFO     | did not find any defunct processes belonging to 1238251
[2025-11-06 14:50:51] 2025-11-06 19:50:20,145 | INFO     | did not find any defunct processes belonging to 1238251
[2025-11-06 14:50:51] 2025-11-06 19:50:20,145 | INFO     | ready for new job
[2025-11-06 14:50:51] 2025-11-06 19:50:20,145 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-06 14:50:51] 2025-11-06 19:50:20,147 | INFO     | ***************************************
[2025-11-06 14:50:51] 2025-11-06 19:50:20,147 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-11-06 14:50:51] 2025-11-06 19:50:20,147 | INFO     | ***************************************
[2025-11-06 14:50:51] 2025-11-06 19:50:20,147 | INFO     | 
[2025-11-06 14:50:51] 2025-11-06 19:50:20,152 | INFO     | architecture information:
[2025-11-06 14:50:51] 2025-11-06 19:50:20,152 | INFO     | executing command: cat /etc/os-release
[2025-11-06 14:50:51] 2025-11-06 19:50:20,170 | INFO     | cat /etc/os-release:
[2025-11-06 14:50:51] NAME="CentOS Linux"
[2025-11-06 14:50:51] VERSION="7 (Core)"
[2025-11-06 14:50:51] ID="centos"
[2025-11-06 14:50:51] ID_LIKE="rhel fedora"
[2025-11-06 14:50:51] VERSION_ID="7"
[2025-11-06 14:50:51] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-06 14:50:51] ANSI_COLOR="0;31"
[2025-11-06 14:50:51] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-06 14:50:51] HOME_URL="https://www.centos.org/"
[2025-11-06 14:50:51] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-06 14:50:51] 
[2025-11-06 14:50:51] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-06 14:50:51] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-06 14:50:51] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-06 14:50:51] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-06 14:50:51] 
[2025-11-06 14:50:51] 2025-11-06 19:50:20,170 | INFO     | ***************************************
[2025-11-06 14:50:51] 2025-11-06 19:50:20,673 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-11-06 14:50:51] 2025-11-06 19:50:20,689 | INFO     | sufficient remaining disk space (171274403840 B)
[2025-11-06 14:50:51] 2025-11-06 19:50:20,689 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-06 14:50:51] 2025-11-06 19:50:20,689 | INFO     | current server update state: UPDATING_FINAL
[2025-11-06 14:50:51] 2025-11-06 19:50:20,689 | INFO     | update_server=False
[2025-11-06 14:50:51] 2025-11-06 19:50:20,690 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-06 14:50:51] 2025-11-06 19:50:20,690 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-06 14:50:51] 2025-11-06 19:50:20,690 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-06 14:50:51] 2025-11-06 19:50:20,690 | INFO     | aborting loop
[2025-11-06 14:50:51] 2025-11-06 19:50:20,690 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-06 14:50:51] 2025-11-06 19:50:20,789 | INFO     | all data control threads have been joined
[2025-11-06 14:50:51] 2025-11-06 19:50:21,695 | INFO     | [job] retrieve thread has finished
[2025-11-06 14:50:51] 2025-11-06 19:50:21,696 | INFO     | [job] job monitor thread has finished
[2025-11-06 14:50:51] 2025-11-06 19:50:21,699 | INFO     | [job] create_data_payload thread has finished
[2025-11-06 14:50:51] 2025-11-06 19:50:21,795 | INFO     | [data] control thread has finished
[2025-11-06 14:50:51] 2025-11-06 19:50:21,996 | INFO     | all payload control threads have been joined
[2025-11-06 14:50:51] 2025-11-06 19:50:22,198 | INFO     | all job control threads have been joined
[2025-11-06 14:50:51] 2025-11-06 19:50:22,312 | INFO     | [payload] execute_payloads thread has finished
[2025-11-06 14:50:51] 2025-11-06 19:50:22,517 | INFO     | [data] copytool_in thread has finished
[2025-11-06 14:50:51] 2025-11-06 19:50:22,519 | INFO     | [payload] failed_post thread has finished
[2025-11-06 14:50:51] 2025-11-06 19:50:22,527 | INFO     | [job] validate thread has finished
[2025-11-06 14:50:51] 2025-11-06 19:50:22,530 | INFO     | [payload] validate_pre thread has finished
[2025-11-06 14:50:51] 2025-11-06 19:50:22,695 | INFO     | [data] copytool_out thread has finished
[2025-11-06 14:50:51] 2025-11-06 19:50:23,004 | INFO     | [payload] control thread has finished
[2025-11-06 14:50:51] 2025-11-06 19:50:23,066 | INFO     | [payload] validate_post thread has finished
[2025-11-06 14:50:51] 2025-11-06 19:50:23,157 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-06 14:50:51] 2025-11-06 19:50:23,203 | INFO     | [job] control thread has finished
[2025-11-06 14:50:51] 2025-11-06 19:50:24,162 | INFO     | [job] queue monitor thread has finished
[2025-11-06 14:50:51] 2025-11-06 19:50:24,695 | INFO     | [data] queue_monitor thread has finished
[2025-11-06 14:50:51] 2025-11-06 19:50:24,878 | INFO     | [monitor] cgroup control has ended
[2025-11-06 14:50:51] 2025-11-06 19:50:30,878 | INFO     | job.realtimelogging is not enabled
[2025-11-06 14:50:51] 2025-11-06 19:50:31,883 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-06 14:50:51] 2025-11-06 19:50:32,502 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140663749855040)>', '<ExcThread(monitor, started 140663106553600)>']
[2025-11-06 14:50:51] 2025-11-06 19:50:37,527 | INFO     | all workflow threads have been joined
[2025-11-06 14:50:51] 2025-11-06 19:50:37,527 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-06 14:50:51] 2025-11-06 19:50:37,528 | INFO     | traces error code: 0
[2025-11-06 14:50:51] 2025-11-06 19:50:37,528 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-06 14:50:51] 2025-11-06 19:50:51,087 | INFO     | PID=1202309 has CPU usage=2.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-06 14:50:51] 2025-11-06 19:50:51,087 | INFO     | .. there are 23 such processes running
[2025-11-06 14:50:51] 2025-11-06 19:50:51,087 | INFO     | found 0 job(s) in 20 queues
[2025-11-06 14:50:51] 2025-11-06 19:50:51,087 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-06 14:50:51] 2025-11-06 19:50:51,087 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-06 14:50:51] 2025-11-06 19:50:51,087 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-06 14:50:51] 2025-11-06 19:50:51,087 | CRITICAL | thread 'MainThread' is not alive
[2025-11-06 14:50:51] 2025-11-06 19:50:51,087 | INFO     | [monitor] control thread has ended
[2025-11-06 14:50:51] 2025-11-06 19:50:51,191 [wrapper] ==== pilot stdout END ====
[2025-11-06 14:50:51] 2025-11-06 19:50:51,194 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-06 14:50:51] 2025-11-06 19:50:51,198 [wrapper] pilotpid: 1202309
[2025-11-06 14:50:51] 2025-11-06 19:50:51,202 [wrapper] Pilot exit status: 0
[2025-11-06 14:50:51] 2025-11-06 19:50:51,210 [wrapper] pandaids: 6864842057
[2025-11-06 14:50:51] 2025-11-06 19:50:51,300 [wrapper] cleanup supervisor_pilot 1511388 1202310
[2025-11-06 14:50:51] 2025-11-06 19:50:51,303 [wrapper] Test setup, not cleaning
[2025-11-06 14:50:51] 2025-11-06 19:50:51,306 [wrapper] apfmon messages muted
[2025-11-06 14:50:51] 2025-11-06 19:50:51,309 [wrapper] ==== wrapper stdout END ====
[2025-11-06 14:50:51] 2025-11-06 19:50:51,312 [wrapper] ==== wrapper stderr END ====
[2025-11-06 14:50:51]  *** Error codes and diagnostics ***
[2025-11-06 14:50:51]     "exeErrorCode": 0,
[2025-11-06 14:50:51]     "exeErrorDiag": "",
[2025-11-06 14:50:51]     "pilotErrorCode": 0,
[2025-11-06 14:50:51]     "pilotErrorDiag": "",
[2025-11-06 14:50:51]  *** Listing of results directory ***
[2025-11-06 14:50:51] total 388576
[2025-11-06 14:50:51] -rw-r--r--. 1 boincer umatlas    557409 Oct 29 11:58 pilot3.tar.gz
[2025-11-06 14:50:51] -rwx------. 1 boincer umatlas     36292 Oct 29 12:01 runpilot2-wrapper.sh
[2025-11-06 14:50:51] -rw-r--r--. 1 boincer umatlas      5112 Oct 29 12:01 queuedata.json
[2025-11-06 14:50:51] -rw-r--r--. 1 boincer umatlas       100 Nov  6 14:02 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-06 14:50:51] -rwxr-xr-x. 1 boincer umatlas      7986 Nov  6 14:02 run_atlas
[2025-11-06 14:50:51] -rw-r--r--. 1 boincer umatlas       105 Nov  6 14:02 job.xml
[2025-11-06 14:50:51] -rw-r--r--. 2 boincer umatlas 217987620 Nov  6 14:02 EVNT.47081487._000922.pool.root.1
[2025-11-06 14:50:51] -rw-r--r--. 2 boincer umatlas     15120 Nov  6 14:02 start_atlas.sh
[2025-11-06 14:50:51] drwxrwx--x. 2 boincer umatlas      4096 Nov  6 14:02 shared
[2025-11-06 14:50:51] -rw-r--r--. 2 boincer umatlas    569674 Nov  6 14:02 input.tar.gz
[2025-11-06 14:50:51] -rw-r--r--. 1 boincer umatlas         0 Nov  6 14:02 boinc_lockfile
[2025-11-06 14:50:51] -rw-r--r--. 1 boincer umatlas      2526 Nov  6 14:02 pandaJob.out
[2025-11-06 14:50:51] -rw-------. 1 boincer umatlas    986470 Nov  6 14:02 agis_schedconf.cvmfs.json
[2025-11-06 14:50:51] -rw-------. 1 boincer umatlas   1560632 Nov  6 14:02 agis_ddmendpoints.agis.ALL.json
[2025-11-06 14:50:51] drwx------. 5 boincer umatlas      4096 Nov  6 14:02 pilot3
[2025-11-06 14:50:51] -rw-r--r--. 1 boincer umatlas      7170 Nov  6 14:48 init_data.xml
[2025-11-06 14:50:51] -rw-------. 1 boincer umatlas 174444927 Nov  6 14:49 HITS.47081490._022977.pool.root.1
[2025-11-06 14:50:51] -rw-r--r--. 1 boincer umatlas       529 Nov  6 14:49 boinc_task_state.xml
[2025-11-06 14:50:51] -rw-------. 1 boincer umatlas        95 Nov  6 14:50 pilot_heartbeat.json
[2025-11-06 14:50:51] -rw-------. 1 boincer umatlas      1035 Nov  6 14:50 memory_monitor_summary.json
[2025-11-06 14:50:51] -rw-------. 1 boincer umatlas    342657 Nov  6 14:50 log.47081490._022977.job.log.tgz.1
[2025-11-06 14:50:51] -rw-------. 1 boincer umatlas      7774 Nov  6 14:50 heartbeat.json
[2025-11-06 14:50:51] -rw-r--r--. 1 boincer umatlas      8192 Nov  6 14:50 boinc_mmap_file
[2025-11-06 14:50:51] -rw-r--r--. 1 boincer umatlas        27 Nov  6 14:50 wrapper_checkpoint.txt
[2025-11-06 14:50:51] -rw-------. 1 boincer umatlas       893 Nov  6 14:50 pilotlog.txt
[2025-11-06 14:50:51] -rw-------. 1 boincer umatlas    434577 Nov  6 14:50 log.47081490._022977.job.log.1
[2025-11-06 14:50:51] -rw-------. 1 boincer umatlas       357 Nov  6 14:50 output.list
[2025-11-06 14:50:51] -rw-r--r--. 1 boincer umatlas       620 Nov  6 14:50 runtime_log
[2025-11-06 14:50:51] -rw-------. 1 boincer umatlas    798720 Nov  6 14:50 result.tar.gz
[2025-11-06 14:50:51] -rw-r--r--. 1 boincer umatlas      8705 Nov  6 14:50 runtime_log.err
[2025-11-06 14:50:51] -rw-------. 1 boincer umatlas       652 Nov  6 14:50 qsaNDmymNY8n9Rq4apOajLDm4fhM0noT9bVof3QYDmqnpMDmZlAOSo.diag
[2025-11-06 14:50:51] -rw-r--r--. 1 boincer umatlas     22019 Nov  6 14:50 stderr.txt
[2025-11-06 14:50:51] HITS file was successfully produced:
[2025-11-06 14:50:51] -rw-------. 1 boincer umatlas 174444927 Nov  6 14:49 shared/HITS.pool.root.1
[2025-11-06 14:50:51]  *** Contents of shared directory: ***
[2025-11-06 14:50:51] total 384604
[2025-11-06 14:50:51] -rw-r--r--. 2 boincer umatlas 217987620 Nov  6 14:02 ATLAS.root_0
[2025-11-06 14:50:51] -rw-r--r--. 2 boincer umatlas     15120 Nov  6 14:02 start_atlas.sh
[2025-11-06 14:50:51] -rw-r--r--. 2 boincer umatlas    569674 Nov  6 14:02 input.tar.gz
[2025-11-06 14:50:51] -rw-------. 1 boincer umatlas 174444927 Nov  6 14:49 HITS.pool.root.1
[2025-11-06 14:50:51] -rw-------. 1 boincer umatlas    798720 Nov  6 14:50 result.tar.gz
14:50:53 (1194573): run_atlas exited; CPU time 20487.426546
14:50:53 (1194573): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN