Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
04:15:26 (1959005): wrapper (7.7.26015): starting
04:15:26 (1959005): wrapper: running run_atlas (--nthreads 4)
[2025-11-05 04:15:26] Arguments: --nthreads 4
[2025-11-05 04:15:26] Threads: 4
[2025-11-05 04:15:26] Checking for CVMFS
[2025-11-05 04:15:26] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-05 04:15:26] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-05 04:15:26] Running cvmfs_config stat atlas.cern.ch
[2025-11-05 04:15:26] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-05 04:15:26] 2.13.2.0 1833841 81 47720 152515 2 188 2513578 4096000 2748 130560 0 302185 100.000 12 1 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
[2025-11-05 04:15:26] CVMFS is ok
[2025-11-05 04:15:26] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-05 04:15:26] Small home clusters do not require a local http proxy but it is suggested if
[2025-11-05 04:15:26] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-11-05 04:15:26] Further information can be found at the LHC@home message board.
[2025-11-05 04:15:26] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-05 04:15:26] Checking for apptainer binary...
[2025-11-05 04:15:26] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-05 04:15:26] Running /usr/bin/apptainer --version
[2025-11-05 04:15:26] apptainer version 1.4.3
[2025-11-05 04:15:26] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-05 04:15:26] x670aorus
[2025-11-05 04:15:26] apptainer works
[2025-11-05 04:15:26] Set ATHENA_PROC_NUMBER=4
[2025-11-05 04:15:26] Set ATHENA_CORE_NUMBER=4
[2025-11-05 04:15:26] Starting ATLAS job with PandaID=6864348702
[2025-11-05 04:15:26] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/x670aorus/boinc3/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-05 05:02:53]  *** The last 200 lines of the pilot log: ***
[2025-11-05 05:02:53]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-11-05 05:02:53]  replicas=None
[2025-11-05 05:02:53]  scope=mc23_13p6TeV
[2025-11-05 05:02:53]  status=None
[2025-11-05 05:02:53]  status_code=0
[2025-11-05 05:02:53]  storage_token=
[2025-11-05 05:02:53]  surl=/home/x670aorus/boinc3/slots/0/PanDA_Pilot-6864348702/log.47081490._011850.job.log.tgz.1
[2025-11-05 05:02:53]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/5a/be/log.47081490._011850.job.log.tgz.1
[2025-11-05 05:02:53]  workdir=None
[2025-11-05 05:02:53] ]
[2025-11-05 05:02:53] 2025-11-05 12:02:15,442 | INFO     | transferring file log.47081490._011850.job.log.tgz.1 from /home/x670aorus/boinc3/slots/0/PanDA_Pilot-6864348702/log.47081490._011850.job.log.tgz.1 to /home/x670aor
[2025-11-05 05:02:53] 2025-11-05 12:02:15,442 | INFO     | executing command: /usr/bin/env mv /home/x670aorus/boinc3/slots/0/PanDA_Pilot-6864348702/log.47081490._011850.job.log.tgz.1 /home/x670aorus/boinc3/slots/0/log.4708
[2025-11-05 05:02:53] 2025-11-05 12:02:15,450 | INFO     | adding to output.list: log.47081490._011850.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/5a/be/log.47081490._011850.job.log.tg
[2025-11-05 05:02:53] 2025-11-05 12:02:15,450 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-11-05 05:02:53] 2025-11-05 12:02:15,450 | INFO     | summary of transferred files:
[2025-11-05 05:02:53] 2025-11-05 12:02:15,450 | INFO     |  -- lfn=log.47081490._011850.job.log.tgz.1, status_code=0, status=transferred
[2025-11-05 05:02:53] 2025-11-05 12:02:15,450 | INFO     | stage-out finished correctly
[2025-11-05 05:02:53] 2025-11-05 12:02:15,469 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-11-05 05:02:53] 2025-11-05 12:02:16,147 | INFO     | time since job start (2800s) is within the limit (172800.0s)
[2025-11-05 05:02:53] 2025-11-05 12:02:16,317 | INFO     | monitor loop #217: job 0:6864348702 is in state 'finished'
[2025-11-05 05:02:53] 2025-11-05 12:02:16,317 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-05 05:02:53] 2025-11-05 12:02:18,152 | INFO     | time since job start (2802s) is within the limit (172800.0s)
[2025-11-05 05:02:53] 2025-11-05 12:02:18,274 | INFO     | job 6864348702 has state=finished
[2025-11-05 05:02:53] 2025-11-05 12:02:18,274 | INFO     | preparing for final server update for job 6864348702 in state='finished'
[2025-11-05 05:02:53] 2025-11-05 12:02:18,275 | INFO     | this job has now completed (state=finished)
[2025-11-05 05:02:53] 2025-11-05 12:02:18,275 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-11-05 05:02:53] 2025-11-05 12:02:18,275 | INFO     | log transfer has been attempted: DONE
[2025-11-05 05:02:53] 2025-11-05 12:02:18,275 | INFO     | job 6864348702 has finished - writing final server update
[2025-11-05 05:02:53] 2025-11-05 12:02:18,275 | INFO     | total number of processed events: 400 (read)
[2025-11-05 05:02:53] 2025-11-05 12:02:18,275 | INFO     | executing command: lscpu
[2025-11-05 05:02:53] 2025-11-05 12:02:18,289 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-11-05 05:02:53] 2025-11-05 12:02:18,820 | INFO     | monitor loop #218: job 0:6864348702 is in state 'finished'
[2025-11-05 05:02:53] 2025-11-05 12:02:18,820 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-05 05:02:53] 2025-11-05 12:02:20,156 | INFO     | time since job start (2804s) is within the limit (172800.0s)
[2025-11-05 05:02:53] 2025-11-05 12:02:21,323 | INFO     | monitor loop #219: job 0:6864348702 is in state 'finished'
[2025-11-05 05:02:53] 2025-11-05 12:02:21,323 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-05 05:02:53] 2025-11-05 12:02:21,388 | INFO     | CPU arch script returned: x86-64-v4
[2025-11-05 05:02:53] 2025-11-05 12:02:21,390 | INFO     | found 16 cores (16 cores per socket, 1 socket) HT, CPU MHz: 3600.97596875
[2025-11-05 05:02:53] 2025-11-05 12:02:21,392 | INFO     | using path: /home/x670aorus/boinc3/slots/0/PanDA_Pilot-6864348702/memory_monitor_summary.json (trf name=prmon)
[2025-11-05 05:02:53] 2025-11-05 12:02:21,392 | INFO     | extracted standard info from prmon json
[2025-11-05 05:02:53] 2025-11-05 12:02:21,392 | INFO     | extracted standard memory fields from prmon json
[2025-11-05 05:02:53] 2025-11-05 12:02:21,392 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-05 05:02:53] 2025-11-05 12:02:21,392 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-11-05 05:02:53] 2025-11-05 12:02:21,392 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-05 05:02:53] 2025-11-05 12:02:21,393 | INFO     | fitting pss+swap vs Time
[2025-11-05 05:02:53] 2025-11-05 12:02:21,393 | INFO     | sum of square deviations: 18381740.0
[2025-11-05 05:02:53] 2025-11-05 12:02:21,393 | INFO     | sum of deviations: 605558285.0
[2025-11-05 05:02:53] 2025-11-05 12:02:21,393 | INFO     | mean x: 1762342816.0
[2025-11-05 05:02:53] 2025-11-05 12:02:21,393 | INFO     | mean y: 2453069.512820513
[2025-11-05 05:02:53] 2025-11-05 12:02:21,393 | INFO     | -- intersect: -58055233158.18003
[2025-11-05 05:02:53] 2025-11-05 12:02:21,393 | INFO     | intersect: -58055233158.18003
[2025-11-05 05:02:53] 2025-11-05 12:02:21,393 | INFO     | chi2: 0.0010427580137567657
[2025-11-05 05:02:53] 2025-11-05 12:02:21,393 | INFO     | -- intersect: -58055233158.18003
[2025-11-05 05:02:53] 2025-11-05 12:02:21,393 | INFO     | current memory leak: 32.94 B/s (using 39 data points, chi2=0.00)
[2025-11-05 05:02:53] 2025-11-05 12:02:21,393 | INFO     | could have reported an average CPU frequency of 3910 MHz (5 samples)
[2025-11-05 05:02:53] 2025-11-05 12:02:21,393 | INFO     | ..............................
[2025-11-05 05:02:53] 2025-11-05 12:02:21,393 | INFO     | . Timing measurements:
[2025-11-05 05:02:53] 2025-11-05 12:02:21,393 | INFO     | . get job = 0 s
[2025-11-05 05:02:53] 2025-11-05 12:02:21,393 | INFO     | . initial setup = 6 s
[2025-11-05 05:02:53] 2025-11-05 12:02:21,393 | INFO     | . payload setup = 1 s
[2025-11-05 05:02:53] 2025-11-05 12:02:21,393 | INFO     | . stage-in = 0 s
[2025-11-05 05:02:53] 2025-11-05 12:02:21,393 | INFO     | . payload execution = 2780 s
[2025-11-05 05:02:53] 2025-11-05 12:02:21,393 | INFO     | . stage-out = 0 s
[2025-11-05 05:02:53] 2025-11-05 12:02:21,393 | INFO     | . log creation = 0 s
[2025-11-05 05:02:53] 2025-11-05 12:02:21,393 | INFO     | ..............................
[2025-11-05 05:02:53] 2025-11-05 12:02:21,579 | INFO     | 
[2025-11-05 05:02:53] 2025-11-05 12:02:21,579 | INFO     | job summary report
[2025-11-05 05:02:53] 2025-11-05 12:02:21,579 | INFO     | --------------------------------------------------
[2025-11-05 05:02:53] 2025-11-05 12:02:21,579 | INFO     | PanDA job id: 6864348702
[2025-11-05 05:02:53] 2025-11-05 12:02:21,579 | INFO     | task id: 47081490
[2025-11-05 05:02:53] 2025-11-05 12:02:21,579 | INFO     | errors: (none)
[2025-11-05 05:02:53] 2025-11-05 12:02:21,579 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-05 05:02:53] 2025-11-05 12:02:21,579 | INFO     | pilot state: finished 
[2025-11-05 05:02:53] 2025-11-05 12:02:21,579 | INFO     | transexitcode: 0
[2025-11-05 05:02:53] 2025-11-05 12:02:21,579 | INFO     | exeerrorcode: 0
[2025-11-05 05:02:53] 2025-11-05 12:02:21,579 | INFO     | exeerrordiag: 
[2025-11-05 05:02:53] 2025-11-05 12:02:21,579 | INFO     | exitcode: 0
[2025-11-05 05:02:53] 2025-11-05 12:02:21,579 | INFO     | exitmsg: OK
[2025-11-05 05:02:53] 2025-11-05 12:02:21,579 | INFO     | cpuconsumptiontime: 10513 s
[2025-11-05 05:02:53] 2025-11-05 12:02:21,579 | INFO     | nevents: 400
[2025-11-05 05:02:53] 2025-11-05 12:02:21,579 | INFO     | neventsw: 0
[2025-11-05 05:02:53] 2025-11-05 12:02:21,579 | INFO     | pid: 1969499
[2025-11-05 05:02:53] 2025-11-05 12:02:21,580 | INFO     | pgrp: 1969499
[2025-11-05 05:02:53] 2025-11-05 12:02:21,580 | INFO     | corecount: 4
[2025-11-05 05:02:53] 2025-11-05 12:02:21,580 | INFO     | event service: False
[2025-11-05 05:02:53] 2025-11-05 12:02:21,580 | INFO     | sizes: {0: 2348894, 2: 2349156, 11: 2349184, 2785: 2374581, 2786: 2374580, 2787: 2383834, 2793: 2384004}
[2025-11-05 05:02:53] 2025-11-05 12:02:21,580 | INFO     | --------------------------------------------------
[2025-11-05 05:02:53] 2025-11-05 12:02:21,580 | INFO     | 
[2025-11-05 05:02:53] 2025-11-05 12:02:21,580 | INFO     | executing command: ls -lF /home/x670aorus/boinc3/slots/0
[2025-11-05 05:02:53] 2025-11-05 12:02:21,587 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-05 05:02:53] 2025-11-05 12:02:21,588 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-05 05:02:53] 2025-11-05 12:02:21,588 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-05 05:02:53] 2025-11-05 12:02:21,588 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-05 05:02:53] 2025-11-05 12:02:21,588 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-05 05:02:53] 2025-11-05 12:02:21,588 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-05 05:02:53] 2025-11-05 12:02:21,588 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-05 05:02:53] 2025-11-05 12:02:21,588 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-05 05:02:53] 2025-11-05 12:02:21,588 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-05 05:02:53] 2025-11-05 12:02:21,588 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-05 05:02:53] 2025-11-05 12:02:21,588 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-05 05:02:53] 2025-11-05 12:02:21,588 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-05 05:02:53] 2025-11-05 12:02:21,588 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-05 05:02:53] 2025-11-05 12:02:21,588 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-05 05:02:53] 2025-11-05 12:02:21,588 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-05 05:02:53] 2025-11-05 12:02:21,588 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-05 05:02:53] 2025-11-05 12:02:21,588 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-05 05:02:53] 2025-11-05 12:02:21,588 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-05 05:02:53] 2025-11-05 12:02:21,588 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-05 05:02:53] 2025-11-05 12:02:21,588 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-05 05:02:53] 2025-11-05 12:02:21,588 | INFO     | job 6864348702 has completed (purged errors)
[2025-11-05 05:02:53] 2025-11-05 12:02:21,588 | INFO     | overall cleanup function is called
[2025-11-05 05:02:53] 2025-11-05 12:02:22,594 | INFO     | --- collectZombieJob: --- 10, [1969499]
[2025-11-05 05:02:53] 2025-11-05 12:02:22,594 | INFO     | zombie collector waiting for pid 1969499
[2025-11-05 05:02:53] 2025-11-05 12:02:22,594 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-05 05:02:53] 2025-11-05 12:02:22,594 | INFO     | collected zombie processes
[2025-11-05 05:02:53] 2025-11-05 12:02:22,594 | INFO     | will attempt to kill all subprocesses of pid=1969499
[2025-11-05 05:02:53] 2025-11-05 12:02:22,646 | INFO     | process IDs to be killed: [1969499] (in reverse order)
[2025-11-05 05:02:53] 2025-11-05 12:02:22,670 | WARNING  | found no corresponding commands to process id(s)
[2025-11-05 05:02:53] 2025-11-05 12:02:22,670 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-05 05:02:53] 2025-11-05 12:02:22,672 | INFO     | did not find any defunct processes belonging to 1969499
[2025-11-05 05:02:53] 2025-11-05 12:02:22,673 | INFO     | did not find any defunct processes belonging to 1969499
[2025-11-05 05:02:53] 2025-11-05 12:02:22,673 | INFO     | ready for new job
[2025-11-05 05:02:53] 2025-11-05 12:02:22,673 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-05 05:02:53] 2025-11-05 12:02:22,674 | INFO     | ***************************************
[2025-11-05 05:02:53] 2025-11-05 12:02:22,674 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-11-05 05:02:53] 2025-11-05 12:02:22,674 | INFO     | ***************************************
[2025-11-05 05:02:53] 2025-11-05 12:02:22,674 | INFO     | 
[2025-11-05 05:02:53] 2025-11-05 12:02:22,674 | INFO     | architecture information:
[2025-11-05 05:02:53] 2025-11-05 12:02:22,674 | INFO     | executing command: cat /etc/os-release
[2025-11-05 05:02:53] 2025-11-05 12:02:22,678 | INFO     | cat /etc/os-release:
[2025-11-05 05:02:53] NAME="CentOS Linux"
[2025-11-05 05:02:53] VERSION="7 (Core)"
[2025-11-05 05:02:53] ID="centos"
[2025-11-05 05:02:53] ID_LIKE="rhel fedora"
[2025-11-05 05:02:53] VERSION_ID="7"
[2025-11-05 05:02:53] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-05 05:02:53] ANSI_COLOR="0;31"
[2025-11-05 05:02:53] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-05 05:02:53] HOME_URL="https://www.centos.org/"
[2025-11-05 05:02:53] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-05 05:02:53] 
[2025-11-05 05:02:53] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-05 05:02:53] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-05 05:02:53] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-05 05:02:53] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-05 05:02:53] 
[2025-11-05 05:02:53] 2025-11-05 12:02:22,678 | INFO     | ***************************************
[2025-11-05 05:02:53] 2025-11-05 12:02:23,181 | INFO     | executing command: df -mP /home/x670aorus/boinc3/slots/0
[2025-11-05 05:02:53] 2025-11-05 12:02:23,187 | INFO     | sufficient remaining disk space (762107133952 B)
[2025-11-05 05:02:53] 2025-11-05 12:02:23,187 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-05 05:02:53] 2025-11-05 12:02:23,187 | INFO     | current server update state: UPDATING_FINAL
[2025-11-05 05:02:53] 2025-11-05 12:02:23,187 | INFO     | update_server=False
[2025-11-05 05:02:53] 2025-11-05 12:02:23,187 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-05 05:02:53] 2025-11-05 12:02:23,187 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-05 05:02:53] 2025-11-05 12:02:23,187 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-05 05:02:53] 2025-11-05 12:02:23,187 | INFO     | aborting loop
[2025-11-05 05:02:53] 2025-11-05 12:02:23,230 | INFO     | all payload control threads have been joined
[2025-11-05 05:02:53] 2025-11-05 12:02:23,479 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-05 05:02:53] 2025-11-05 12:02:23,582 | INFO     | all data control threads have been joined
[2025-11-05 05:02:53] 2025-11-05 12:02:24,192 | INFO     | [job] retrieve thread has finished
[2025-11-05 05:02:53] 2025-11-05 12:02:24,192 | INFO     | [job] job monitor thread has finished
[2025-11-05 05:02:53] 2025-11-05 12:02:24,193 | INFO     | [job] queue monitor thread has finished
[2025-11-05 05:02:53] 2025-11-05 12:02:24,204 | INFO     | all job control threads have been joined
[2025-11-05 05:02:53] 2025-11-05 12:02:24,213 | INFO     | [job] create_data_payload thread has finished
[2025-11-05 05:02:53] 2025-11-05 12:02:24,233 | INFO     | [payload] failed_post thread has finished
[2025-11-05 05:02:53] 2025-11-05 12:02:24,235 | INFO     | [payload] control thread has finished
[2025-11-05 05:02:53] 2025-11-05 12:02:24,235 | INFO     | [job] validate thread has finished
[2025-11-05 05:02:53] 2025-11-05 12:02:24,587 | INFO     | [data] control thread has finished
[2025-11-05 05:02:53] 2025-11-05 12:02:24,688 | INFO     | [payload] validate_post thread has finished
[2025-11-05 05:02:53] 2025-11-05 12:02:24,959 | INFO     | [payload] execute_payloads thread has finished
[2025-11-05 05:02:53] 2025-11-05 12:02:25,208 | INFO     | [job] control thread has finished
[2025-11-05 05:02:53] 2025-11-05 12:02:25,483 | INFO     | [data] copytool_out thread has finished
[2025-11-05 05:02:53] 2025-11-05 12:02:25,587 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-05 05:02:53] 2025-11-05 12:02:25,630 | INFO     | [data] copytool_in thread has finished
[2025-11-05 05:02:53] 2025-11-05 12:02:25,683 | INFO     | [payload] validate_pre thread has finished
[2025-11-05 05:02:53] 2025-11-05 12:02:25,996 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-05 05:02:53] 2025-11-05 12:02:30,001 | INFO     | [data] queue_monitor thread has finished
[2025-11-05 05:02:53] 2025-11-05 12:02:40,053 | INFO     | [monitor] cgroup control has ended
[2025-11-05 05:02:53] 2025-11-05 12:02:41,423 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 134416979937088)>', '<ExcThread(monitor, started 134416328271616)>']
[2025-11-05 05:02:53] 2025-11-05 12:02:46,429 | INFO     | all workflow threads have been joined
[2025-11-05 05:02:53] 2025-11-05 12:02:46,429 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-05 05:02:53] 2025-11-05 12:02:46,429 | INFO     | traces error code: 0
[2025-11-05 05:02:53] 2025-11-05 12:02:46,429 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-05 05:02:53] 2025-11-05 12:02:53,318 | INFO     | PID=1962850 has CPU usage=1.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-05 05:02:53] 2025-11-05 12:02:53,318 | INFO     | .. there are 3 such processes running
[2025-11-05 05:02:53] 2025-11-05 12:02:53,319 | INFO     | found 0 job(s) in 20 queues
[2025-11-05 05:02:53] 2025-11-05 12:02:53,319 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-05 05:02:53] 2025-11-05 12:02:53,319 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-05 05:02:53] 2025-11-05 12:02:53,319 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-05 05:02:53] 2025-11-05 12:02:53,319 | INFO     | [monitor] control thread has ended
[2025-11-05 05:02:53] 2025-11-05 12:02:53,352 [wrapper] ==== pilot stdout END ====
[2025-11-05 05:02:53] 2025-11-05 12:02:53,353 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-05 05:02:53] 2025-11-05 12:02:53,353 [wrapper] pilotpid: 1962850
[2025-11-05 05:02:53] 2025-11-05 12:02:53,354 [wrapper] Pilot exit status: 0
[2025-11-05 05:02:53] 2025-11-05 12:02:53,357 [wrapper] pandaids: 6864348702
[2025-11-05 05:02:53] 2025-11-05 12:02:53,372 [wrapper] cleanup supervisor_pilot 2035943 1962851
[2025-11-05 05:02:53] 2025-11-05 12:02:53,373 [wrapper] Test setup, not cleaning
[2025-11-05 05:02:53] 2025-11-05 12:02:53,374 [wrapper] apfmon messages muted
[2025-11-05 05:02:53] 2025-11-05 12:02:53,375 [wrapper] ==== wrapper stdout END ====
[2025-11-05 05:02:53] 2025-11-05 12:02:53,376 [wrapper] ==== wrapper stderr END ====
[2025-11-05 05:02:53]  *** Error codes and diagnostics ***
[2025-11-05 05:02:53]     "exeErrorCode": 0,
[2025-11-05 05:02:53]     "exeErrorDiag": "",
[2025-11-05 05:02:53]     "pilotErrorCode": 0,
[2025-11-05 05:02:53]     "pilotErrorDiag": "",
[2025-11-05 05:02:53]  *** Listing of results directory ***
[2025-11-05 05:02:53] total 390272
[2025-11-05 05:02:53] -rwx------ 1 x670aorus x670aorus     36292 Oct 29 02:10 runpilot2-wrapper.sh
[2025-11-05 05:02:53] -rw-r--r-- 1 x670aorus x670aorus      5112 Oct 29 02:10 queuedata.json
[2025-11-05 05:02:53] -rw-r--r-- 1 x670aorus x670aorus    557409 Oct 29 02:10 pilot3.tar.gz
[2025-11-05 05:02:53] -rw-rw-r-- 1 x670aorus x670aorus       100 Nov  5 04:15 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-05 05:02:53] -rwxr-xr-x 1 x670aorus x670aorus      7986 Nov  5 04:15 run_atlas
[2025-11-05 05:02:53] -rw-rw-r-- 1 x670aorus x670aorus       105 Nov  5 04:15 job.xml
[2025-11-05 05:02:53] -rw-r--r-- 2 x670aorus x670aorus     15120 Nov  5 04:15 start_atlas.sh
[2025-11-05 05:02:53] drwxrwx--x 2 x670aorus x670aorus      4096 Nov  5 04:15 shared
[2025-11-05 05:02:53] -rw-r--r-- 2 x670aorus x670aorus    569668 Nov  5 04:15 input.tar.gz
[2025-11-05 05:02:53] -rw-rw-r-- 1 x670aorus x670aorus      9965 Nov  5 04:15 init_data.xml
[2025-11-05 05:02:53] -rw-r--r-- 2 x670aorus x670aorus 214846231 Nov  5 04:15 EVNT.47081487._000465.pool.root.1
[2025-11-05 05:02:53] -rw-rw-r-- 1 x670aorus x670aorus         0 Nov  5 04:15 boinc_lockfile
[2025-11-05 05:02:53] -rw-rw-r-- 1 x670aorus x670aorus      2526 Nov  5 04:15 pandaJob.out
[2025-11-05 05:02:53] -rw------- 1 x670aorus x670aorus    985837 Nov  5 04:15 agis_schedconf.cvmfs.json
[2025-11-05 05:02:53] -rw------- 1 x670aorus x670aorus   1560632 Nov  5 04:15 agis_ddmendpoints.agis.ALL.json
[2025-11-05 05:02:53] drwx------ 5 x670aorus x670aorus      4096 Nov  5 04:15 pilot3
[2025-11-05 05:02:53] -rw------- 1 x670aorus x670aorus 179478806 Nov  5 05:01 HITS.47081490._011850.pool.root.1
[2025-11-05 05:02:53] -rw-rw-r-- 1 x670aorus x670aorus       529 Nov  5 05:02 boinc_task_state.xml
[2025-11-05 05:02:53] -rw------- 1 x670aorus x670aorus      1020 Nov  5 05:02 memory_monitor_summary.json
[2025-11-05 05:02:53] -rw------- 1 x670aorus x670aorus    253296 Nov  5 05:02 log.47081490._011850.job.log.tgz.1
[2025-11-05 05:02:53] -rw------- 1 x670aorus x670aorus      7734 Nov  5 05:02 heartbeat.json
[2025-11-05 05:02:53] -rw-rw-r-- 1 x670aorus x670aorus      8192 Nov  5 05:02 boinc_mmap_file
[2025-11-05 05:02:53] -rw-rw-r-- 1 x670aorus x670aorus        27 Nov  5 05:02 wrapper_checkpoint.txt
[2025-11-05 05:02:53] -rw------- 1 x670aorus x670aorus       822 Nov  5 05:02 pilotlog.txt
[2025-11-05 05:02:53] -rw------- 1 x670aorus x670aorus        95 Nov  5 05:02 pilot_heartbeat.json
[2025-11-05 05:02:53] -rw------- 1 x670aorus x670aorus    446801 Nov  5 05:02 log.47081490._011850.job.log.1
[2025-11-05 05:02:53] -rw------- 1 x670aorus x670aorus       357 Nov  5 05:02 output.list
[2025-11-05 05:02:53] -rw-rw-r-- 1 x670aorus x670aorus       620 Nov  5 05:02 runtime_log
[2025-11-05 05:02:53] -rw------- 1 x670aorus x670aorus    716800 Nov  5 05:02 result.tar.gz
[2025-11-05 05:02:53] -rw------- 1 x670aorus x670aorus       653 Nov  5 05:02 YGoMDm9QGY8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm2ZGODmlqPmQo.diag
[2025-11-05 05:02:53] -rw-rw-r-- 1 x670aorus x670aorus      8815 Nov  5 05:02 runtime_log.err
[2025-11-05 05:02:53] -rw-rw-r-- 1 x670aorus x670aorus     21955 Nov  5 05:02 stderr.txt
[2025-11-05 05:02:53] HITS file was successfully produced:
[2025-11-05 05:02:53] -rw------- 1 x670aorus x670aorus 179478806 Nov  5 05:01 shared/HITS.pool.root.1
[2025-11-05 05:02:53]  *** Contents of shared directory: ***
[2025-11-05 05:02:53] total 386372
[2025-11-05 05:02:53] -rw-r--r-- 2 x670aorus x670aorus     15120 Nov  5 04:15 start_atlas.sh
[2025-11-05 05:02:53] -rw-r--r-- 2 x670aorus x670aorus    569668 Nov  5 04:15 input.tar.gz
[2025-11-05 05:02:53] -rw-r--r-- 2 x670aorus x670aorus 214846231 Nov  5 04:15 ATLAS.root_0
[2025-11-05 05:02:53] -rw------- 1 x670aorus x670aorus 179478806 Nov  5 05:01 HITS.pool.root.1
[2025-11-05 05:02:53] -rw------- 1 x670aorus x670aorus    716800 Nov  5 05:02 result.tar.gz
05:02:54 (1959005): run_atlas exited; CPU time 10519.443814
05:02:54 (1959005): called boinc_finish(0)

</stderr_txt>
]]>

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