Stderr output

<core_client_version>7.24.5</core_client_version>
<![CDATA[
<stderr_txt>
06:05:01 (922485): wrapper (7.7.26015): starting
06:05:01 (922485): wrapper: running run_atlas (--nthreads 4)
[2025-11-01 06:05:01] Arguments: --nthreads 4
[2025-11-01 06:05:01] Threads: 4
[2025-11-01 06:05:01] Checking for CVMFS
[2025-11-01 06:05:03] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-01 06:05:05] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-01 06:05:05] Running cvmfs_config stat atlas.cern.ch
[2025-11-01 06:05:05] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-01 06:05:05] 2.11.3.0 922695 0 24764 152375 3 1 2767490 4096001 0 130560 0 0 0.000 1291 1064 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
[2025-11-01 06:05:05] CVMFS is ok
[2025-11-01 06:05:05] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-01 06:05:05] Small home clusters do not require a local http proxy but it is suggested if
[2025-11-01 06:05:05] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-11-01 06:05:05] Further information can be found at the LHC@home message board.
[2025-11-01 06:05:05] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-01 06:05:05] Checking for apptainer binary...
[2025-11-01 06:05:05] apptainer is not installed, using version from CVMFS
[2025-11-01 06:05:05] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-01 06:05:05] officedc-System-Product-Name
[2025-11-01 06:05:05] apptainer works
[2025-11-01 06:05:05] Set ATHENA_PROC_NUMBER=4
[2025-11-01 06:05:05] Set ATHENA_CORE_NUMBER=4
[2025-11-01 06:05:05] Starting ATLAS job with PandaID=6857547799
[2025-11-01 06:05:05] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc3/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-01 08:00:42]  *** The last 200 lines of the pilot log: ***
[2025-11-01 08:00:42] 2025-11-01 13:59:47,639 | INFO     | extracted standard info from prmon json
[2025-11-01 08:00:42] 2025-11-01 13:59:47,639 | INFO     | extracted standard memory fields from prmon json
[2025-11-01 08:00:42] 2025-11-01 13:59:47,639 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-01 08:00:42] 2025-11-01 13:59:47,639 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-11-01 08:00:42] 2025-11-01 13:59:47,639 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-01 08:00:42] 2025-11-01 13:59:47,641 | INFO     | fitting pss+swap vs Time
[2025-11-01 08:00:42] 2025-11-01 13:59:47,641 | INFO     | sum of square deviations: 435610028.0
[2025-11-01 08:00:42] 2025-11-01 13:59:47,641 | INFO     | sum of deviations: -13907765394.000004
[2025-11-01 08:00:42] 2025-11-01 13:59:47,641 | INFO     | mean x: 1762002139.5
[2025-11-01 08:00:42] 2025-11-01 13:59:47,641 | INFO     | mean y: 2401924.464285714
[2025-11-01 08:00:42] 2025-11-01 13:59:47,641 | INFO     | -- intersect: 56258022329.722885
[2025-11-01 08:00:42] 2025-11-01 13:59:47,641 | INFO     | intersect: 56258022329.722885
[2025-11-01 08:00:42] 2025-11-01 13:59:47,642 | INFO     | chi2: 1.5982552603426352
[2025-11-01 08:00:42] 2025-11-01 13:59:47,642 | INFO     | sum of square deviations: 379832238.0
[2025-11-01 08:00:42] 2025-11-01 13:59:47,642 | INFO     | sum of deviations: -12819317567.000002
[2025-11-01 08:00:42] 2025-11-01 13:59:47,642 | INFO     | mean x: 1762001987.0
[2025-11-01 08:00:42] 2025-11-01 13:59:47,642 | INFO     | mean y: 2404902.336448598
[2025-11-01 08:00:42] 2025-11-01 13:59:47,642 | INFO     | -- intersect: 59469877026.27451
[2025-11-01 08:00:42] 2025-11-01 13:59:47,642 | INFO     | intersect: 59469877026.27451
[2025-11-01 08:00:42] 2025-11-01 13:59:47,642 | INFO     | chi2: 1.5918315526968598
[2025-11-01 08:00:42] 2025-11-01 13:59:47,642 | INFO     | current chi2=1.5918315526968598 (change=0.4019200064699464 %)
[2025-11-01 08:00:42] 2025-11-01 13:59:47,642 | INFO     | right removable region: 106
[2025-11-01 08:00:42] 2025-11-01 13:59:47,642 | INFO     | sum of square deviations: 379832238.0
[2025-11-01 08:00:42] 2025-11-01 13:59:47,643 | INFO     | sum of deviations: -25278554086.0
[2025-11-01 08:00:42] 2025-11-01 13:59:47,643 | INFO     | mean x: 1762002292.0
[2025-11-01 08:00:42] 2025-11-01 13:59:47,643 | INFO     | mean y: 2431906.2429906544
[2025-11-01 08:00:42] 2025-11-01 13:59:47,643 | INFO     | -- intersect: 117267018168.08095
[2025-11-01 08:00:42] 2025-11-01 13:59:47,643 | INFO     | intersect: 117267018168.08095
[2025-11-01 08:00:42] 2025-11-01 13:59:47,643 | INFO     | chi2: 0.22986906475277416
[2025-11-01 08:00:42] 2025-11-01 13:59:47,643 | INFO     | current chi2=0.22986906475277416 (change=85.61749987899339 %)
[2025-11-01 08:00:42] 2025-11-01 13:59:47,643 | INFO     | sum of square deviations: 329031285.5
[2025-11-01 08:00:42] 2025-11-01 13:59:47,643 | INFO     | sum of deviations: -20068499464.50001
[2025-11-01 08:00:42] 2025-11-01 13:59:47,644 | INFO     | mean x: 1762002444.5
[2025-11-01 08:00:42] 2025-11-01 13:59:47,644 | INFO     | mean y: 2416243.9509803923
[2025-11-01 08:00:42] 2025-11-01 13:59:47,644 | INFO     | -- intersect: 107471665133.64648
[2025-11-01 08:00:42] 2025-11-01 13:59:47,644 | INFO     | intersect: 107471665133.64648
[2025-11-01 08:00:42] 2025-11-01 13:59:47,644 | INFO     | chi2: 0.21828843826548988
[2025-11-01 08:00:42] 2025-11-01 13:59:47,644 | INFO     | current chi2=0.21828843826548988 (change=5.037923001835557 %)
[2025-11-01 08:00:42] 2025-11-01 13:59:47,644 | INFO     | left removable region: 20
[2025-11-01 08:00:42] 2025-11-01 13:59:47,644 | INFO     | sum of square deviations: 197203697.5
[2025-11-01 08:00:42] 2025-11-01 13:59:47,644 | INFO     | sum of deviations: -8417814560.0
[2025-11-01 08:00:42] 2025-11-01 13:59:47,644 | INFO     | mean x: 1762002566.5
[2025-11-01 08:00:42] 2025-11-01 13:59:47,644 | INFO     | mean y: 2380611.0465116277
[2025-11-01 08:00:42] 2025-11-01 13:59:47,644 | INFO     | -- intersect: 75215021383.36807
[2025-11-01 08:00:42] 2025-11-01 13:59:47,644 | INFO     | intersect: 75215021383.36807
[2025-11-01 08:00:42] 2025-11-01 13:59:47,644 | INFO     | chi2: 0.13835671697001284
[2025-11-01 08:00:42] 2025-11-01 13:59:47,644 | INFO     | -- intersect: 75215021383.36807
[2025-11-01 08:00:42] 2025-11-01 13:59:47,645 | INFO     | current memory leak: -42.69 B/s (using 86 data points, chi2=0.14)
[2025-11-01 08:00:42] 2025-11-01 13:59:47,645 | INFO     | could have reported an average CPU frequency of 3991 MHz (7 samples)
[2025-11-01 08:00:42] 2025-11-01 13:59:47,645 | INFO     | ..............................
[2025-11-01 08:00:42] 2025-11-01 13:59:47,645 | INFO     | . Timing measurements:
[2025-11-01 08:00:42] 2025-11-01 13:59:47,645 | INFO     | . get job = 0 s
[2025-11-01 08:00:42] 2025-11-01 13:59:47,645 | INFO     | . initial setup = 3 s
[2025-11-01 08:00:42] 2025-11-01 13:59:47,645 | INFO     | . payload setup = 7 s
[2025-11-01 08:00:42] 2025-11-01 13:59:47,645 | INFO     | . stage-in = 0 s
[2025-11-01 08:00:42] 2025-11-01 13:59:47,645 | INFO     | . payload execution = 6827 s
[2025-11-01 08:00:42] 2025-11-01 13:59:47,645 | INFO     | . stage-out = 0 s
[2025-11-01 08:00:42] 2025-11-01 13:59:47,645 | INFO     | . log creation = 0 s
[2025-11-01 08:00:42] 2025-11-01 13:59:47,645 | INFO     | ..............................
[2025-11-01 08:00:42] 2025-11-01 13:59:48,068 | WARNING  | process 933580 can no longer be monitored (due to stat problems) - aborting
[2025-11-01 08:00:42] 2025-11-01 13:59:48,068 | INFO     | using path: /var/lib/boinc3/slots/5/PanDA_Pilot-6857547799/memory_monitor_summary.json (trf name=prmon)
[2025-11-01 08:00:42] 2025-11-01 13:59:48,164 | INFO     | 
[2025-11-01 08:00:42] 2025-11-01 13:59:48,164 | INFO     | job summary report
[2025-11-01 08:00:42] 2025-11-01 13:59:48,164 | INFO     | --------------------------------------------------
[2025-11-01 08:00:42] 2025-11-01 13:59:48,165 | INFO     | PanDA job id: 6857547799
[2025-11-01 08:00:42] 2025-11-01 13:59:48,165 | INFO     | task id: 46771637
[2025-11-01 08:00:42] 2025-11-01 13:59:48,165 | INFO     | errors: (none)
[2025-11-01 08:00:42] 2025-11-01 13:59:48,165 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-01 08:00:42] 2025-11-01 13:59:48,165 | INFO     | pilot state: finished 
[2025-11-01 08:00:42] 2025-11-01 13:59:48,165 | INFO     | transexitcode: 0
[2025-11-01 08:00:42] 2025-11-01 13:59:48,165 | INFO     | exeerrorcode: 0
[2025-11-01 08:00:42] 2025-11-01 13:59:48,165 | INFO     | exeerrordiag: 
[2025-11-01 08:00:42] 2025-11-01 13:59:48,165 | INFO     | exitcode: 0
[2025-11-01 08:00:42] 2025-11-01 13:59:48,165 | INFO     | exitmsg: OK
[2025-11-01 08:00:42] 2025-11-01 13:59:48,165 | INFO     | cpuconsumptiontime: 26500 s
[2025-11-01 08:00:42] 2025-11-01 13:59:48,165 | INFO     | nevents: 400
[2025-11-01 08:00:42] 2025-11-01 13:59:48,165 | INFO     | neventsw: 0
[2025-11-01 08:00:42] 2025-11-01 13:59:48,165 | INFO     | pid: 933580
[2025-11-01 08:00:42] 2025-11-01 13:59:48,165 | INFO     | pgrp: 933580
[2025-11-01 08:00:42] 2025-11-01 13:59:48,165 | INFO     | corecount: 4
[2025-11-01 08:00:42] 2025-11-01 13:59:48,165 | INFO     | event service: False
[2025-11-01 08:00:42] 2025-11-01 13:59:48,165 | INFO     | sizes: {0: 2348835, 5: 2349097, 11: 2349153, 6836: 2376348, 6838: 2385348, 6840: 2385404, 6845: 2385726}
[2025-11-01 08:00:42] 2025-11-01 13:59:48,165 | INFO     | --------------------------------------------------
[2025-11-01 08:00:42] 2025-11-01 13:59:48,165 | INFO     | 
[2025-11-01 08:00:42] 2025-11-01 13:59:48,165 | INFO     | executing command: ls -lF /var/lib/boinc3/slots/5
[2025-11-01 08:00:42] 2025-11-01 13:59:48,180 | INFO     | number of running child processes to parent process 933580: 1
[2025-11-01 08:00:42] 2025-11-01 13:59:48,181 | INFO     | maximum number of monitored processes: 6
[2025-11-01 08:00:42] 2025-11-01 13:59:48,181 | INFO     | aborting job monitoring since job object (job id=6857547799) has expired
[2025-11-01 08:00:42] 2025-11-01 13:59:48,207 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-01 08:00:42] 2025-11-01 13:59:48,207 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-01 08:00:42] 2025-11-01 13:59:48,207 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-01 08:00:42] 2025-11-01 13:59:48,207 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-01 08:00:42] 2025-11-01 13:59:48,207 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-01 08:00:42] 2025-11-01 13:59:48,207 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-01 08:00:42] 2025-11-01 13:59:48,207 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-01 08:00:42] 2025-11-01 13:59:48,207 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-01 08:00:42] 2025-11-01 13:59:48,207 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-01 08:00:42] 2025-11-01 13:59:48,207 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-01 08:00:42] 2025-11-01 13:59:48,207 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-01 08:00:42] 2025-11-01 13:59:48,207 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-01 08:00:42] 2025-11-01 13:59:48,208 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-01 08:00:42] 2025-11-01 13:59:48,208 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-01 08:00:42] 2025-11-01 13:59:48,208 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-01 08:00:42] 2025-11-01 13:59:48,208 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-01 08:00:42] 2025-11-01 13:59:48,208 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-01 08:00:42] 2025-11-01 13:59:48,208 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-01 08:00:42] 2025-11-01 13:59:48,208 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-01 08:00:42] 2025-11-01 13:59:48,208 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-01 08:00:42] 2025-11-01 13:59:48,208 | INFO     | job 6857547799 has completed (purged errors)
[2025-11-01 08:00:42] 2025-11-01 13:59:48,208 | INFO     | overall cleanup function is called
[2025-11-01 08:00:42] 2025-11-01 13:59:49,215 | INFO     | --- collectZombieJob: --- 10, [933580]
[2025-11-01 08:00:42] 2025-11-01 13:59:49,215 | INFO     | zombie collector waiting for pid 933580
[2025-11-01 08:00:42] 2025-11-01 13:59:49,215 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-01 08:00:42] 2025-11-01 13:59:49,216 | INFO     | collected zombie processes
[2025-11-01 08:00:42] 2025-11-01 13:59:49,216 | INFO     | will attempt to kill all subprocesses of pid=933580
[2025-11-01 08:00:42] 2025-11-01 13:59:49,314 | INFO     | process IDs to be killed: [933580] (in reverse order)
[2025-11-01 08:00:42] 2025-11-01 13:59:49,380 | WARNING  | found no corresponding commands to process id(s)
[2025-11-01 08:00:42] 2025-11-01 13:59:49,380 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-01 08:00:42] 2025-11-01 13:59:49,384 | INFO     | did not find any defunct processes belonging to 933580
[2025-11-01 08:00:42] 2025-11-01 13:59:49,387 | INFO     | did not find any defunct processes belonging to 933580
[2025-11-01 08:00:42] 2025-11-01 13:59:49,387 | INFO     | ready for new job
[2025-11-01 08:00:42] 2025-11-01 13:59:49,387 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-01 08:00:42] 2025-11-01 13:59:49,389 | INFO     | ***************************************
[2025-11-01 08:00:42] 2025-11-01 13:59:49,389 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-11-01 08:00:42] 2025-11-01 13:59:49,389 | INFO     | ***************************************
[2025-11-01 08:00:42] 2025-11-01 13:59:49,389 | INFO     | 
[2025-11-01 08:00:42] 2025-11-01 13:59:49,390 | INFO     | architecture information:
[2025-11-01 08:00:42] 2025-11-01 13:59:49,390 | INFO     | executing command: cat /etc/os-release
[2025-11-01 08:00:42] 2025-11-01 13:59:49,402 | INFO     | cat /etc/os-release:
[2025-11-01 08:00:42] NAME="CentOS Linux"
[2025-11-01 08:00:42] VERSION="7 (Core)"
[2025-11-01 08:00:42] ID="centos"
[2025-11-01 08:00:42] ID_LIKE="rhel fedora"
[2025-11-01 08:00:42] VERSION_ID="7"
[2025-11-01 08:00:42] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-01 08:00:42] ANSI_COLOR="0;31"
[2025-11-01 08:00:42] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-01 08:00:42] HOME_URL="https://www.centos.org/"
[2025-11-01 08:00:42] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-01 08:00:42] 
[2025-11-01 08:00:42] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-01 08:00:42] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-01 08:00:42] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-01 08:00:42] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-01 08:00:42] 
[2025-11-01 08:00:42] 2025-11-01 13:59:49,402 | INFO     | ***************************************
[2025-11-01 08:00:42] 2025-11-01 13:59:49,905 | INFO     | executing command: df -mP /var/lib/boinc3/slots/5
[2025-11-01 08:00:42] 2025-11-01 13:59:49,923 | INFO     | sufficient remaining disk space (378598850560 B)
[2025-11-01 08:00:42] 2025-11-01 13:59:49,923 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-01 08:00:42] 2025-11-01 13:59:49,924 | INFO     | current server update state: UPDATING_FINAL
[2025-11-01 08:00:42] 2025-11-01 13:59:49,924 | INFO     | update_server=False
[2025-11-01 08:00:42] 2025-11-01 13:59:49,924 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-01 08:00:42] 2025-11-01 13:59:49,924 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-01 08:00:42] 2025-11-01 13:59:49,924 | INFO     | aborting loop
[2025-11-01 08:00:42] 2025-11-01 13:59:50,580 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-01 08:00:42] 2025-11-01 13:59:50,687 | INFO     | all data control threads have been joined
[2025-11-01 08:00:42] 2025-11-01 13:59:50,771 | INFO     | all payload control threads have been joined
[2025-11-01 08:00:42] 2025-11-01 13:59:50,928 | INFO     | [job] job monitor thread has finished
[2025-11-01 08:00:42] 2025-11-01 13:59:50,929 | INFO     | [job] retrieve thread has finished
[2025-11-01 08:00:42] 2025-11-01 13:59:50,946 | INFO     | [payload] validate_pre thread has finished
[2025-11-01 08:00:42] 2025-11-01 13:59:51,185 | INFO     | all job control threads have been joined
[2025-11-01 08:00:42] 2025-11-01 13:59:51,227 | INFO     | [payload] execute_payloads thread has finished
[2025-11-01 08:00:42] 2025-11-01 13:59:51,575 | INFO     | [data] copytool_in thread has finished
[2025-11-01 08:00:42] 2025-11-01 13:59:51,692 | INFO     | [data] control thread has finished
[2025-11-01 08:00:42] 2025-11-01 13:59:51,776 | INFO     | [payload] control thread has finished
[2025-11-01 08:00:42] 2025-11-01 13:59:52,087 | INFO     | [payload] validate_post thread has finished
[2025-11-01 08:00:42] 2025-11-01 13:59:52,190 | INFO     | [job] control thread has finished
[2025-11-01 08:00:42] 2025-11-01 13:59:52,304 | INFO     | [job] validate thread has finished
[2025-11-01 08:00:42] 2025-11-01 13:59:52,399 | INFO     | [job] create_data_payload thread has finished
[2025-11-01 08:00:42] 2025-11-01 13:59:52,452 | INFO     | [payload] failed_post thread has finished
[2025-11-01 08:00:42] 2025-11-01 13:59:52,585 | INFO     | [data] copytool_out thread has finished
[2025-11-01 08:00:42] 2025-11-01 13:59:52,710 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-01 08:00:42] 2025-11-01 13:59:53,153 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-01 08:00:42] 2025-11-01 13:59:53,715 | INFO     | [job] queue monitor thread has finished
[2025-11-01 08:00:42] 2025-11-01 13:59:57,159 | INFO     | [data] queue_monitor thread has finished
[2025-11-01 08:00:42] 2025-11-01 14:00:00,259 | INFO     | job.realtimelogging is not enabled
[2025-11-01 08:00:42] 2025-11-01 14:00:01,264 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-01 08:00:42] 2025-11-01 14:00:19,761 | INFO     | PID=926924 has CPU usage=1.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-11-01 08:00:42] 2025-11-01 14:00:19,761 | INFO     | .. there are 2 such processes running
[2025-11-01 08:00:42] 2025-11-01 14:00:19,762 | INFO     | found 0 job(s) in 20 queues
[2025-11-01 08:00:42] 2025-11-01 14:00:19,762 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-01 08:00:42] 2025-11-01 14:00:19,762 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-01 08:00:42] 2025-11-01 14:00:36,680 | INFO     | [monitor] cgroup control has ended
[2025-11-01 08:00:42] 2025-11-01 14:00:37,384 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 135349524723520)>', '<ExcThread(monitor, started 135349040834304)>']
[2025-11-01 08:00:42] 2025-11-01 14:00:37,854 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-01 08:00:42] 2025-11-01 14:00:37,854 | INFO     | [monitor] control thread has ended
[2025-11-01 08:00:42] 2025-11-01 14:00:42,410 | INFO     | all workflow threads have been joined
[2025-11-01 08:00:42] 2025-11-01 14:00:42,410 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-01 08:00:42] 2025-11-01 14:00:42,410 | INFO     | traces error code: 0
[2025-11-01 08:00:42] 2025-11-01 14:00:42,410 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-01 08:00:42] 2025-11-01 14:00:42,509 [wrapper] ==== pilot stdout END ====
[2025-11-01 08:00:42] 2025-11-01 14:00:42,511 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-01 08:00:42] 2025-11-01 14:00:42,513 [wrapper] pilotpid: 926924
[2025-11-01 08:00:42] 2025-11-01 14:00:42,520 [wrapper] Pilot exit status: 0
[2025-11-01 08:00:42] 2025-11-01 14:00:42,535 [wrapper] pandaids: 6857547799
[2025-11-01 08:00:42] 2025-11-01 14:00:42,568 [wrapper] cleanup supervisor_pilot  969310 926925
[2025-11-01 08:00:42] 2025-11-01 14:00:42,580 [wrapper] Test setup, not cleaning
[2025-11-01 08:00:42] 2025-11-01 14:00:42,583 [wrapper] apfmon messages muted
[2025-11-01 08:00:42] 2025-11-01 14:00:42,592 [wrapper] ==== wrapper stdout END ====
[2025-11-01 08:00:42] 2025-11-01 14:00:42,594 [wrapper] ==== wrapper stderr END ====
[2025-11-01 08:00:42]  *** Error codes and diagnostics ***
[2025-11-01 08:00:42]     "exeErrorCode": 0,
[2025-11-01 08:00:42]     "exeErrorDiag": "",
[2025-11-01 08:00:42]     "pilotErrorCode": 0,
[2025-11-01 08:00:42]     "pilotErrorDiag": "",
[2025-11-01 08:00:42]  *** Listing of results directory ***
[2025-11-01 08:00:42] total 431400
[2025-11-01 08:00:42] -rw-r--r-- 1 boinc boinc    557409 Oct 25 00:33 pilot3.tar.gz
[2025-11-01 08:00:42] -rw-r--r-- 1 boinc boinc      5112 Oct 25 00:43 queuedata.json
[2025-11-01 08:00:42] -rwx------ 1 boinc boinc     36292 Oct 25 00:45 runpilot2-wrapper.sh
[2025-11-01 08:00:42] -rw-rw-r-- 1 boinc boinc       100 Nov  1 06:05 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-01 08:00:42] -rwxr-xr-x 1 boinc boinc      7986 Nov  1 06:05 run_atlas
[2025-11-01 08:00:42] -rw-rw-r-- 1 boinc boinc       105 Nov  1 06:05 job.xml
[2025-11-01 08:00:42] -rw-rw-r-- 1 boinc boinc      9754 Nov  1 06:05 init_data.xml
[2025-11-01 08:00:42] -rw-r--r-- 2 boinc boinc 230494137 Nov  1 06:05 EVNT.46771634._004144.pool.root.1
[2025-11-01 08:00:42] -rw-r--r-- 2 boinc boinc     15120 Nov  1 06:05 start_atlas.sh
[2025-11-01 08:00:42] drwxrwx--x 2 boinc boinc      4096 Nov  1 06:05 shared
[2025-11-01 08:00:42] -rw-r--r-- 2 boinc boinc    569693 Nov  1 06:05 input.tar.gz
[2025-11-01 08:00:42] -rw-rw-r-- 1 boinc boinc         0 Nov  1 06:05 boinc_lockfile
[2025-11-01 08:00:42] -rw-rw-r-- 1 boinc boinc      2561 Nov  1 06:05 pandaJob.out
[2025-11-01 08:00:42] -rw------- 1 boinc boinc    987516 Nov  1 06:05 agis_schedconf.cvmfs.json
[2025-11-01 08:00:42] -rw------- 1 boinc boinc   1560632 Nov  1 06:05 agis_ddmendpoints.agis.ALL.json
[2025-11-01 08:00:42] drwx------ 5 boinc boinc      4096 Nov  1 06:05 pilot3
[2025-11-01 08:00:42] -rw------- 1 boinc boinc 204761597 Nov  1 07:59 HITS.46771637._131881.pool.root.1
[2025-11-01 08:00:42] -rw------- 1 boinc boinc        95 Nov  1 07:59 pilot_heartbeat.json
[2025-11-01 08:00:42] -rw-rw-r-- 1 boinc boinc       529 Nov  1 07:59 boinc_task_state.xml
[2025-11-01 08:00:42] -rw------- 1 boinc boinc      1017 Nov  1 07:59 memory_monitor_summary.json
[2025-11-01 08:00:42] -rw------- 1 boinc boinc    290826 Nov  1 07:59 log.46771637._131881.job.log.tgz.1
[2025-11-01 08:00:42] -rw------- 1 boinc boinc      7777 Nov  1 07:59 heartbeat.json
[2025-11-01 08:00:42] -rw-rw-r-- 1 boinc boinc      8192 Nov  1 08:00 boinc_mmap_file
[2025-11-01 08:00:42] -rw-rw-r-- 1 boinc boinc        27 Nov  1 08:00 wrapper_checkpoint.txt
[2025-11-01 08:00:42] -rw------- 1 boinc boinc      4896 Nov  1 08:00 pilotlog.txt
[2025-11-01 08:00:42] -rw------- 1 boinc boinc    995985 Nov  1 08:00 log.46771637._131881.job.log.1
[2025-11-01 08:00:42] -rw------- 1 boinc boinc       357 Nov  1 08:00 output.list
[2025-11-01 08:00:42] -rw-rw-r-- 1 boinc boinc       620 Nov  1 08:00 runtime_log
[2025-11-01 08:00:42] -rw------- 1 boinc boinc   1310720 Nov  1 08:00 result.tar.gz
[2025-11-01 08:00:42] -rw-rw-r-- 1 boinc boinc      8755 Nov  1 08:00 runtime_log.err
[2025-11-01 08:00:42] -rw------- 1 boinc boinc       657 Nov  1 08:00 cSXKDm6CnW8n9Rq4apOajLDm4fhM0noT9bVof3QYDm17mMDm9atXAo.diag
[2025-11-01 08:00:42] -rw-rw-r-- 1 boinc boinc     21162 Nov  1 08:00 stderr.txt
[2025-11-01 08:00:42] HITS file was successfully produced:
[2025-11-01 08:00:42] -rw------- 1 boinc boinc 204761597 Nov  1 07:59 shared/HITS.pool.root.1
[2025-11-01 08:00:42]  *** Contents of shared directory: ***
[2025-11-01 08:00:42] total 426916
[2025-11-01 08:00:42] -rw-r--r-- 2 boinc boinc 230494137 Nov  1 06:05 ATLAS.root_0
[2025-11-01 08:00:42] -rw-r--r-- 2 boinc boinc     15120 Nov  1 06:05 start_atlas.sh
[2025-11-01 08:00:42] -rw-r--r-- 2 boinc boinc    569693 Nov  1 06:05 input.tar.gz
[2025-11-01 08:00:42] -rw------- 1 boinc boinc 204761597 Nov  1 07:59 HITS.pool.root.1
[2025-11-01 08:00:42] -rw------- 1 boinc boinc   1310720 Nov  1 08:00 result.tar.gz
08:00:44 (922485): run_atlas exited; CPU time 26543.179720
08:00:44 (922485): called boinc_finish(0)

</stderr_txt>
]]>

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