Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
18:59:00 (728646): wrapper (7.7.26015): starting
18:59:00 (728646): wrapper: running run_atlas (--nthreads 4)
[2025-10-29 18:59:00] Arguments: --nthreads 4
[2025-10-29 18:59:00] Threads: 4
[2025-10-29 18:59:00] Checking for CVMFS
[2025-10-29 18:59:00] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-29 18:59:00] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-29 18:59:00] Running cvmfs_config stat atlas.cern.ch
[2025-10-29 18:59:00] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-29 18:59:00] 2.9.2.0 525847 514 73224 152272 2 57 32098773 36864000 0 130560 0 523042 99.990 20382 1435 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-29 18:59:00] CVMFS is ok
[2025-10-29 18:59:00] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-29 18:59:00] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-29 18:59:00] Further information can be found at the LHC@home message board.
[2025-10-29 18:59:00] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-29 18:59:00] Checking for apptainer binary...
[2025-10-29 18:59:00] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-29 18:59:00] Running /usr/bin/apptainer --version
[2025-10-29 18:59:00] apptainer version 1.4.1-1.1
[2025-10-29 18:59:00] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-29 18:59:00] atlasA139
[2025-10-29 18:59:00] apptainer works
[2025-10-29 18:59:00] Set ATHENA_PROC_NUMBER=4
[2025-10-29 18:59:00] Set ATHENA_CORE_NUMBER=4
[2025-10-29 18:59:00] Starting ATLAS job with PandaID=6864767369
[2025-10-29 18:59:00] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-29 20:03:18]  *** The last 200 lines of the pilot log: ***
[2025-10-29 20:03:18]  protocol_id=None
[2025-10-29 20:03:18]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-10-29 20:03:18]  replicas=None
[2025-10-29 20:03:18]  scope=mc23_13p6TeV
[2025-10-29 20:03:18]  status=None
[2025-10-29 20:03:18]  status_code=0
[2025-10-29 20:03:18]  storage_token=
[2025-10-29 20:03:18]  surl=/local/data/boinc/slots/0/PanDA_Pilot-6864767369/log.47081490._018706.job.log.tgz.1
[2025-10-29 20:03:18]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/4c/3f/log.47081490._018706.job.log.tgz.1
[2025-10-29 20:03:18]  workdir=None
[2025-10-29 20:03:18] ]
[2025-10-29 20:03:18] 2025-10-29 19:02:06,749 | INFO     | transferring file log.47081490._018706.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6864767369/log.47081490._018706.job.log.tgz.1 to /local/data/boinc/
[2025-10-29 20:03:18] 2025-10-29 19:02:06,749 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6864767369/log.47081490._018706.job.log.tgz.1 /local/data/boinc/slots/0/log.47081490._0187
[2025-10-29 20:03:18] 2025-10-29 19:02:06,767 | INFO     | adding to output.list: log.47081490._018706.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/4c/3f/log.47081490._018706.job.log.tg
[2025-10-29 20:03:18] 2025-10-29 19:02:06,768 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-29 20:03:18] 2025-10-29 19:02:06,768 | INFO     | summary of transferred files:
[2025-10-29 20:03:18] 2025-10-29 19:02:06,768 | INFO     |  -- lfn=log.47081490._018706.job.log.tgz.1, status_code=0, status=transferred
[2025-10-29 20:03:18] 2025-10-29 19:02:06,768 | INFO     | stage-out finished correctly
[2025-10-29 20:03:18] 2025-10-29 19:02:08,121 | INFO     | time since job start (3780s) is within the limit (172800.0s)
[2025-10-29 20:03:18] 2025-10-29 19:02:08,398 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-29 20:03:18] 2025-10-29 19:02:08,439 | INFO     | job 6864767369 has state=finished
[2025-10-29 20:03:18] 2025-10-29 19:02:08,440 | INFO     | preparing for final server update for job 6864767369 in state='finished'
[2025-10-29 20:03:18] 2025-10-29 19:02:08,440 | INFO     | this job has now completed (state=finished)
[2025-10-29 20:03:18] 2025-10-29 19:02:08,440 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-29 20:03:18] 2025-10-29 19:02:08,440 | INFO     | log transfer has been attempted: DONE
[2025-10-29 20:03:18] 2025-10-29 19:02:08,440 | INFO     | job 6864767369 has finished - writing final server update
[2025-10-29 20:03:18] 2025-10-29 19:02:08,440 | INFO     | total number of processed events: 400 (read)
[2025-10-29 20:03:18] 2025-10-29 19:02:08,442 | INFO     | executing command: lscpu
[2025-10-29 20:03:18] 2025-10-29 19:02:08,461 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-29 20:03:18] 2025-10-29 19:02:10,126 | INFO     | time since job start (3782s) is within the limit (172800.0s)
[2025-10-29 20:03:18] 2025-10-29 19:02:11,216 | INFO     | PID=732444 has CPU usage=3.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-29 20:03:18] 2025-10-29 19:02:11,721 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-29 20:03:18] 2025-10-29 19:02:11,723 | INFO     | found 8 cores (8 cores per socket, 1 socket) HT, CPU MHz: 3162.7379375
[2025-10-29 20:03:18] 2025-10-29 19:02:11,724 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6864767369/memory_monitor_summary.json (trf name=prmon)
[2025-10-29 20:03:18] 2025-10-29 19:02:11,725 | INFO     | extracted standard info from prmon json
[2025-10-29 20:03:18] 2025-10-29 19:02:11,725 | INFO     | extracted standard memory fields from prmon json
[2025-10-29 20:03:18] 2025-10-29 19:02:11,725 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-29 20:03:18] 2025-10-29 19:02:11,725 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-29 20:03:18] 2025-10-29 19:02:11,725 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-29 20:03:18] 2025-10-29 19:02:11,725 | INFO     | fitting pss+swap vs Time
[2025-10-29 20:03:18] 2025-10-29 19:02:11,726 | INFO     | sum of square deviations: 51573060.0
[2025-10-29 20:03:18] 2025-10-29 19:02:11,726 | INFO     | sum of deviations: -2906999103.0000005
[2025-10-29 20:03:18] 2025-10-29 19:02:11,726 | INFO     | mean x: 1761762722.0
[2025-10-29 20:03:18] 2025-10-29 19:02:11,726 | INFO     | mean y: 2438007.090909091
[2025-10-29 20:03:18] 2025-10-29 19:02:11,726 | INFO     | -- intersect: 99307048835.93913
[2025-10-29 20:03:18] 2025-10-29 19:02:11,726 | INFO     | intersect: 99307048835.93913
[2025-10-29 20:03:18] 2025-10-29 19:02:11,726 | INFO     | chi2: 0.06195368888418306
[2025-10-29 20:03:18] 2025-10-29 19:02:11,726 | INFO     | -- intersect: 99307048835.93913
[2025-10-29 20:03:18] 2025-10-29 19:02:11,726 | INFO     | current memory leak: -56.37 B/s (using 55 data points, chi2=0.06)
[2025-10-29 20:03:18] 2025-10-29 19:02:11,726 | INFO     | could have reported an average CPU frequency of 3562 MHz (6 samples)
[2025-10-29 20:03:18] 2025-10-29 19:02:11,726 | INFO     | ..............................
[2025-10-29 20:03:18] 2025-10-29 19:02:11,726 | INFO     | . Timing measurements:
[2025-10-29 20:03:18] 2025-10-29 19:02:11,726 | INFO     | . get job = 0 s
[2025-10-29 20:03:18] 2025-10-29 19:02:11,726 | INFO     | . initial setup = 1 s
[2025-10-29 20:03:18] 2025-10-29 19:02:11,726 | INFO     | . payload setup = 4 s
[2025-10-29 20:03:18] 2025-10-29 19:02:11,726 | INFO     | . stage-in = 0 s
[2025-10-29 20:03:18] 2025-10-29 19:02:11,726 | INFO     | . payload execution = 3756 s
[2025-10-29 20:03:18] 2025-10-29 19:02:11,726 | INFO     | . stage-out = 0 s
[2025-10-29 20:03:18] 2025-10-29 19:02:11,726 | INFO     | . log creation = 0 s
[2025-10-29 20:03:18] 2025-10-29 19:02:11,726 | INFO     | ..............................
[2025-10-29 20:03:18] 2025-10-29 19:02:12,183 | INFO     | 
[2025-10-29 20:03:18] 2025-10-29 19:02:12,183 | INFO     | job summary report
[2025-10-29 20:03:18] 2025-10-29 19:02:12,183 | INFO     | --------------------------------------------------
[2025-10-29 20:03:18] 2025-10-29 19:02:12,183 | INFO     | PanDA job id: 6864767369
[2025-10-29 20:03:18] 2025-10-29 19:02:12,183 | INFO     | task id: 47081490
[2025-10-29 20:03:18] 2025-10-29 19:02:12,183 | INFO     | errors: (none)
[2025-10-29 20:03:18] 2025-10-29 19:02:12,184 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-29 20:03:18] 2025-10-29 19:02:12,184 | INFO     | pilot state: finished 
[2025-10-29 20:03:18] 2025-10-29 19:02:12,184 | INFO     | transexitcode: 0
[2025-10-29 20:03:18] 2025-10-29 19:02:12,184 | INFO     | exeerrorcode: 0
[2025-10-29 20:03:18] 2025-10-29 19:02:12,184 | INFO     | exeerrordiag: 
[2025-10-29 20:03:18] 2025-10-29 19:02:12,184 | INFO     | exitcode: 0
[2025-10-29 20:03:18] 2025-10-29 19:02:12,184 | INFO     | exitmsg: OK
[2025-10-29 20:03:18] 2025-10-29 19:02:12,184 | INFO     | cpuconsumptiontime: 14124 s
[2025-10-29 20:03:18] 2025-10-29 19:02:12,184 | INFO     | nevents: 400
[2025-10-29 20:03:18] 2025-10-29 19:02:12,184 | INFO     | neventsw: 0
[2025-10-29 20:03:18] 2025-10-29 19:02:12,184 | INFO     | pid: 739006
[2025-10-29 20:03:18] 2025-10-29 19:02:12,184 | INFO     | pgrp: 739006
[2025-10-29 20:03:18] 2025-10-29 19:02:12,184 | INFO     | corecount: 4
[2025-10-29 20:03:18] 2025-10-29 19:02:12,184 | INFO     | event service: False
[2025-10-29 20:03:18] 2025-10-29 19:02:12,184 | INFO     | sizes: {0: 2348889, 3: 2349151, 11: 2349179, 3764: 2384075, 3766: 2384075, 3769: 2384269}
[2025-10-29 20:03:18] 2025-10-29 19:02:12,184 | INFO     | --------------------------------------------------
[2025-10-29 20:03:18] 2025-10-29 19:02:12,184 | INFO     | 
[2025-10-29 20:03:18] 2025-10-29 19:02:12,184 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-10-29 20:03:18] 2025-10-29 19:02:12,204 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-29 20:03:18] 2025-10-29 19:02:12,205 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-29 20:03:18] 2025-10-29 19:02:12,205 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-29 20:03:18] 2025-10-29 19:02:12,205 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-29 20:03:18] 2025-10-29 19:02:12,205 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-29 20:03:18] 2025-10-29 19:02:12,205 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-29 20:03:18] 2025-10-29 19:02:12,205 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-29 20:03:18] 2025-10-29 19:02:12,205 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-29 20:03:18] 2025-10-29 19:02:12,205 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-29 20:03:18] 2025-10-29 19:02:12,205 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-29 20:03:18] 2025-10-29 19:02:12,205 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-29 20:03:18] 2025-10-29 19:02:12,205 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-29 20:03:18] 2025-10-29 19:02:12,205 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-29 20:03:18] 2025-10-29 19:02:12,205 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-29 20:03:18] 2025-10-29 19:02:12,205 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-29 20:03:18] 2025-10-29 19:02:12,205 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-29 20:03:18] 2025-10-29 19:02:12,205 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-29 20:03:18] 2025-10-29 19:02:12,205 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-29 20:03:18] 2025-10-29 19:02:12,205 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-29 20:03:18] 2025-10-29 19:02:12,205 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-29 20:03:18] 2025-10-29 19:02:12,206 | INFO     | job 6864767369 has completed (purged errors)
[2025-10-29 20:03:18] 2025-10-29 19:02:12,206 | INFO     | overall cleanup function is called
[2025-10-29 20:03:18] 2025-10-29 19:02:12,669 | WARNING  | process 739006 can no longer be monitored (due to stat problems) - aborting
[2025-10-29 20:03:18] 2025-10-29 19:02:12,705 | INFO     | using path: /local/data/boinc/slots/0/memory_monitor_summary.json (trf name=prmon)
[2025-10-29 20:03:18] 2025-10-29 19:02:12,750 | INFO     | number of running child processes to parent process 739006: 1
[2025-10-29 20:03:18] 2025-10-29 19:02:12,750 | INFO     | maximum number of monitored processes: 6
[2025-10-29 20:03:18] 2025-10-29 19:02:12,750 | INFO     | aborting job monitoring since job object (job id=6864767369) has expired
[2025-10-29 20:03:18] 2025-10-29 19:02:13,212 | INFO     | --- collectZombieJob: --- 10, [739006]
[2025-10-29 20:03:18] 2025-10-29 19:02:13,213 | INFO     | zombie collector waiting for pid 739006
[2025-10-29 20:03:18] 2025-10-29 19:02:13,213 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-29 20:03:18] 2025-10-29 19:02:13,213 | INFO     | collected zombie processes
[2025-10-29 20:03:18] 2025-10-29 19:02:13,213 | INFO     | will attempt to kill all subprocesses of pid=739006
[2025-10-29 20:03:18] 2025-10-29 19:02:13,261 | INFO     | process IDs to be killed: [739006] (in reverse order)
[2025-10-29 20:03:18] 2025-10-29 19:02:13,294 | WARNING  | found no corresponding commands to process id(s)
[2025-10-29 20:03:18] 2025-10-29 19:02:13,295 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-29 20:03:18] 2025-10-29 19:02:13,297 | INFO     | did not find any defunct processes belonging to 739006
[2025-10-29 20:03:18] 2025-10-29 19:02:13,298 | INFO     | did not find any defunct processes belonging to 739006
[2025-10-29 20:03:18] 2025-10-29 19:02:13,298 | INFO     | ready for new job
[2025-10-29 20:03:18] 2025-10-29 19:02:13,298 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-29 20:03:18] 2025-10-29 19:02:13,299 | INFO     | ***************************************
[2025-10-29 20:03:18] 2025-10-29 19:02:13,299 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-29 20:03:18] 2025-10-29 19:02:13,299 | INFO     | ***************************************
[2025-10-29 20:03:18] 2025-10-29 19:02:13,299 | INFO     | 
[2025-10-29 20:03:18] 2025-10-29 19:02:13,299 | INFO     | architecture information:
[2025-10-29 20:03:18] 2025-10-29 19:02:13,300 | INFO     | executing command: cat /etc/os-release
[2025-10-29 20:03:18] 2025-10-29 19:02:13,313 | INFO     | cat /etc/os-release:
[2025-10-29 20:03:18] NAME="CentOS Linux"
[2025-10-29 20:03:18] VERSION="7 (Core)"
[2025-10-29 20:03:18] ID="centos"
[2025-10-29 20:03:18] ID_LIKE="rhel fedora"
[2025-10-29 20:03:18] VERSION_ID="7"
[2025-10-29 20:03:18] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-29 20:03:18] ANSI_COLOR="0;31"
[2025-10-29 20:03:18] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-29 20:03:18] HOME_URL="https://www.centos.org/"
[2025-10-29 20:03:18] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-29 20:03:18] 
[2025-10-29 20:03:18] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-29 20:03:18] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-29 20:03:18] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-29 20:03:18] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-29 20:03:18] 
[2025-10-29 20:03:18] 2025-10-29 19:02:13,313 | INFO     | ***************************************
[2025-10-29 20:03:18] 2025-10-29 19:02:13,817 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-10-29 20:03:18] 2025-10-29 19:02:13,835 | INFO     | sufficient remaining disk space (327730331648 B)
[2025-10-29 20:03:18] 2025-10-29 19:02:13,835 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-29 20:03:18] 2025-10-29 19:02:13,835 | INFO     | current server update state: UPDATING_FINAL
[2025-10-29 20:03:18] 2025-10-29 19:02:13,835 | INFO     | update_server=False
[2025-10-29 20:03:18] 2025-10-29 19:02:13,835 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-29 20:03:18] 2025-10-29 19:02:13,835 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-29 20:03:18] 2025-10-29 19:02:13,835 | INFO     | aborting loop
[2025-10-29 20:03:18] 2025-10-29 19:02:14,302 | INFO     | all payload control threads have been joined
[2025-10-29 20:03:18] 2025-10-29 19:02:14,447 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-29 20:03:18] 2025-10-29 19:02:14,684 | INFO     | all job control threads have been joined
[2025-10-29 20:03:18] 2025-10-29 19:02:14,728 | INFO     | all data control threads have been joined
[2025-10-29 20:03:18] 2025-10-29 19:02:14,820 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-29 20:03:18] 2025-10-29 19:02:14,841 | INFO     | [job] job monitor thread has finished
[2025-10-29 20:03:18] 2025-10-29 19:02:14,841 | INFO     | [job] retrieve thread has finished
[2025-10-29 20:03:18] 2025-10-29 19:02:14,889 | INFO     | [payload] execute_payloads thread has finished
[2025-10-29 20:03:18] 2025-10-29 19:02:14,922 | INFO     | [payload] validate_pre thread has finished
[2025-10-29 20:03:18] 2025-10-29 19:02:15,308 | INFO     | [payload] control thread has finished
[2025-10-29 20:03:18] 2025-10-29 19:02:15,352 | INFO     | [data] copytool_in thread has finished
[2025-10-29 20:03:18] 2025-10-29 19:02:15,430 | INFO     | [payload] validate_post thread has finished
[2025-10-29 20:03:18] 2025-10-29 19:02:15,670 | INFO     | [payload] failed_post thread has finished
[2025-10-29 20:03:18] 2025-10-29 19:02:15,690 | INFO     | [job] control thread has finished
[2025-10-29 20:03:18] 2025-10-29 19:02:15,734 | INFO     | [data] control thread has finished
[2025-10-29 20:03:18] 2025-10-29 19:02:16,224 | INFO     | [job] validate thread has finished
[2025-10-29 20:03:18] 2025-10-29 19:02:16,326 | INFO     | [job] create_data_payload thread has finished
[2025-10-29 20:03:18] 2025-10-29 19:02:16,777 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-29 20:03:18] 2025-10-29 19:02:16,827 | INFO     | [data] copytool_out thread has finished
[2025-10-29 20:03:18] 2025-10-29 19:02:17,783 | INFO     | [job] queue monitor thread has finished
[2025-10-29 20:03:18] 2025-10-29 19:02:18,454 | INFO     | [data] queue_monitor thread has finished
[2025-10-29 20:03:18] 2025-10-29 19:02:24,561 | INFO     | job.realtimelogging is not enabled
[2025-10-29 20:03:18] 2025-10-29 19:02:25,567 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-29 20:03:18] 2025-10-29 19:02:43,362 | INFO     | PID=732444 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-29 20:03:18] 2025-10-29 19:02:43,363 | INFO     | found 0 job(s) in 20 queues
[2025-10-29 20:03:18] 2025-10-29 19:02:43,363 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-29 20:03:18] 2025-10-29 19:02:43,363 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-29 20:03:18] 2025-10-29 19:03:12,579 | INFO     | [monitor] cgroup control has ended
[2025-10-29 20:03:18] 2025-10-29 19:03:13,078 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139880342787904)>', '<ExcThread(monitor, started 139879023372032)>']
[2025-10-29 20:03:18] 2025-10-29 19:03:13,522 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-29 20:03:18] 2025-10-29 19:03:13,522 | INFO     | [monitor] control thread has ended
[2025-10-29 20:03:18] 2025-10-29 19:03:18,104 | INFO     | all workflow threads have been joined
[2025-10-29 20:03:18] 2025-10-29 19:03:18,105 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-29 20:03:18] 2025-10-29 19:03:18,105 | INFO     | traces error code: 0
[2025-10-29 20:03:18] 2025-10-29 19:03:18,105 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-29 20:03:18] 2025-10-29 19:03:18,177 [wrapper] ==== pilot stdout END ====
[2025-10-29 20:03:18] 2025-10-29 19:03:18,182 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-29 20:03:18] 2025-10-29 19:03:18,185 [wrapper] pilotpid: 732444
[2025-10-29 20:03:18] 2025-10-29 19:03:18,189 [wrapper] Pilot exit status: 0
[2025-10-29 20:03:18] 2025-10-29 19:03:18,200 [wrapper] pandaids: 6864767369
[2025-10-29 20:03:18] 2025-10-29 19:03:18,224 [wrapper] cleanup supervisor_pilot  748849 732445
[2025-10-29 20:03:18] 2025-10-29 19:03:18,227 [wrapper] Test setup, not cleaning
[2025-10-29 20:03:18] 2025-10-29 19:03:18,231 [wrapper] apfmon messages muted
[2025-10-29 20:03:18] 2025-10-29 19:03:18,235 [wrapper] ==== wrapper stdout END ====
[2025-10-29 20:03:18] 2025-10-29 19:03:18,239 [wrapper] ==== wrapper stderr END ====
[2025-10-29 20:03:18]  *** Error codes and diagnostics ***
[2025-10-29 20:03:18]     "exeErrorCode": 0,
[2025-10-29 20:03:18]     "exeErrorDiag": "",
[2025-10-29 20:03:18]     "pilotErrorCode": 0,
[2025-10-29 20:03:18]     "pilotErrorDiag": "",
[2025-10-29 20:03:18]  *** Listing of results directory ***
[2025-10-29 20:03:18] total 391692
[2025-10-29 20:03:18] -rw-r--r-- 1 boinc boinc    557409 Oct 29 14:30 pilot3.tar.gz
[2025-10-29 20:03:18] -rw-r--r-- 1 boinc boinc      5112 Oct 29 14:45 queuedata.json
[2025-10-29 20:03:18] -rwx------ 1 boinc boinc     36292 Oct 29 14:46 runpilot2-wrapper.sh
[2025-10-29 20:03:18] -rw-r--r-- 1 boinc boinc       100 Oct 29 18:58 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-29 20:03:18] -rwxr-xr-x 1 boinc boinc      7986 Oct 29 18:58 run_atlas
[2025-10-29 20:03:18] -rw-r--r-- 1 boinc boinc       105 Oct 29 18:58 job.xml
[2025-10-29 20:03:18] -rw-r--r-- 2 boinc boinc 216838593 Oct 29 18:59 EVNT.47081487._000749.pool.root.1
[2025-10-29 20:03:18] -rw-r--r-- 2 boinc boinc    569676 Oct 29 18:59 input.tar.gz
[2025-10-29 20:03:18] -rw-r--r-- 2 boinc boinc     15120 Oct 29 18:59 start_atlas.sh
[2025-10-29 20:03:18] drwxrwx--x 2 boinc boinc      4096 Oct 29 18:59 shared
[2025-10-29 20:03:18] -rw-r--r-- 1 boinc boinc         0 Oct 29 18:59 boinc_setup_complete
[2025-10-29 20:03:18] -rw-r--r-- 1 boinc boinc      6373 Oct 29 18:59 init_data.xml
[2025-10-29 20:03:18] -rw-r--r-- 1 boinc boinc         0 Oct 29 18:59 boinc_lockfile
[2025-10-29 20:03:18] -rw-r--r-- 1 boinc boinc      2526 Oct 29 18:59 pandaJob.out
[2025-10-29 20:03:18] -rw------- 1 boinc boinc    986512 Oct 29 18:59 agis_schedconf.cvmfs.json
[2025-10-29 20:03:18] -rw------- 1 boinc boinc   1560632 Oct 29 18:59 agis_ddmendpoints.agis.ALL.json
[2025-10-29 20:03:18] drwx------ 5 boinc boinc      4096 Oct 29 18:59 pilot3
[2025-10-29 20:03:18] -rw------- 1 boinc boinc 178712683 Oct 29 20:01 HITS.47081490._018706.pool.root.1
[2025-10-29 20:03:18] -rw-r--r-- 1 boinc boinc       529 Oct 29 20:01 boinc_task_state.xml
[2025-10-29 20:03:18] -rw------- 1 boinc boinc      1033 Oct 29 20:02 memory_monitor_summary.json
[2025-10-29 20:03:18] -rw------- 1 boinc boinc    243168 Oct 29 20:02 log.47081490._018706.job.log.tgz.1
[2025-10-29 20:03:18] -rw------- 1 boinc boinc      7765 Oct 29 20:02 heartbeat.json
[2025-10-29 20:03:18] -rw------- 1 boinc boinc        95 Oct 29 20:02 pilot_heartbeat.json
[2025-10-29 20:03:18] -rw-r--r-- 1 boinc boinc        27 Oct 29 20:03 wrapper_checkpoint.txt
[2025-10-29 20:03:18] -rw-r--r-- 1 boinc boinc      8192 Oct 29 20:03 boinc_mmap_file
[2025-10-29 20:03:18] -rw------- 1 boinc boinc      4823 Oct 29 20:03 pilotlog.txt
[2025-10-29 20:03:18] -rw------- 1 boinc boinc    568052 Oct 29 20:03 log.47081490._018706.job.log.1
[2025-10-29 20:03:18] -rw------- 1 boinc boinc       357 Oct 29 20:03 output.list
[2025-10-29 20:03:18] -rw-r--r-- 1 boinc boinc       620 Oct 29 20:03 runtime_log
[2025-10-29 20:03:18] -rw------- 1 boinc boinc    829440 Oct 29 20:03 result.tar.gz
[2025-10-29 20:03:18] -rw-r--r-- 1 boinc boinc      8792 Oct 29 20:03 runtime_log.err
[2025-10-29 20:03:18] -rw------- 1 boinc boinc       661 Oct 29 20:03 7G7NDmsgLY8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmBcHODmr4WsQn.diag
[2025-10-29 20:03:18] -rw-r--r-- 1 boinc boinc     21827 Oct 29 20:03 stderr.txt
[2025-10-29 20:03:18] HITS file was successfully produced:
[2025-10-29 20:03:18] -rw------- 1 boinc boinc 178712683 Oct 29 20:01 shared/HITS.pool.root.1
[2025-10-29 20:03:18]  *** Contents of shared directory: ***
[2025-10-29 20:03:18] total 387684
[2025-10-29 20:03:18] -rw-r--r-- 2 boinc boinc 216838593 Oct 29 18:59 ATLAS.root_0
[2025-10-29 20:03:18] -rw-r--r-- 2 boinc boinc    569676 Oct 29 18:59 input.tar.gz
[2025-10-29 20:03:18] -rw-r--r-- 2 boinc boinc     15120 Oct 29 18:59 start_atlas.sh
[2025-10-29 20:03:18] -rw------- 1 boinc boinc 178712683 Oct 29 20:01 HITS.pool.root.1
[2025-10-29 20:03:18] -rw------- 1 boinc boinc    829440 Oct 29 20:03 result.tar.gz
20:03:19 (728646): run_atlas exited; CPU time 14134.651719
20:03:19 (728646): called boinc_finish(0)

</stderr_txt>
]]>

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