Stderr output

<core_client_version>8.2.4</core_client_version>
<![CDATA[
<stderr_txt>
2025-10-29 18:25:24 (106856): vboxwrapper version 26210
2025-10-29 18:25:24 (106856): BOINC client version: 8.2.4
2025-10-29 18:25:25 (106856): Detected: VirtualBox VboxManage Interface (Version: 6.1.12)
2025-10-29 18:25:25 (106856): Successfully copied 'init_data.xml' to the shared directory.
2025-10-29 18:25:26 (106856): Create VM. (boinc_7f232b85eb22aa63, slot#3)
2025-10-29 18:25:27 (106856): Setting Memory Size for VM. (4400MB)
2025-10-29 18:25:28 (106856): Setting CPU Count for VM. (4)
2025-10-29 18:25:28 (106856): Setting Chipset Options for VM.
2025-10-29 18:25:29 (106856): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2025-10-29 18:25:29 (106856): Setting Boot Options for VM.
2025-10-29 18:25:30 (106856): Setting Network Configuration for NAT. (Driver: virtio)
2025-10-29 18:25:31 (106856): Enabling VM Network Access.
2025-10-29 18:25:32 (106856): Disabling USB Support for VM.
2025-10-29 18:25:32 (106856): Disabling COM Port Support for VM.
2025-10-29 18:25:33 (106856): Disabling LPT Port Support for VM.
2025-10-29 18:25:33 (106856): Disabling Audio Support for VM.
2025-10-29 18:25:34 (106856): Disabling Clipboard Support for VM.
2025-10-29 18:25:34 (106856): Disabling Drag and Drop Support for VM.
2025-10-29 18:25:35 (106856): Adding storage controller(s) to VM.
2025-10-29 18:25:35 (106856): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2025-10-29 18:25:37 (106856): Adding VirtualBox Guest Additions to VM.
2025-10-29 18:25:37 (106856): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-10-29 18:25:38 (106856): forwarding host port 50110 to guest port 80
2025-10-29 18:25:38 (106856): Enabling remote desktop for VM.
2025-10-29 18:25:39 (106856): Required extension pack not installed, remote desktop not enabled.
2025-10-29 18:25:39 (106856): Enabling shared directory for VM.
2025-10-29 18:25:40 (106856): Starting VM using VBoxManage interface. (boinc_7f232b85eb22aa63, slot#3)
2025-10-29 18:26:09 (106856): Successfully started VM. (PID = '105872')
2025-10-29 18:26:09 (106856): Reporting VM Process ID to BOINC.
2025-10-29 18:26:09 (106856): Guest Log: BIOS: VirtualBox 6.1.12
2025-10-29 18:26:09 (106856): Guest Log: CPUID EDX: 0x178bfbff
2025-10-29 18:26:09 (106856): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-10-29 18:26:09 (106856): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-10-29 18:26:09 (106856): VM state change detected. (old = 'poweredoff', new = 'running')
2025-10-29 18:26:09 (106856): Detected: Web Application Enabled (http://localhost:50110)
2025-10-29 18:26:10 (106856): Preference change detected
2025-10-29 18:26:10 (106856): Setting CPU throttle for VM. (100%)
2025-10-29 18:26:10 (106856): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-10-29 18:26:12 (106856): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-10-29 18:26:12 (106856): Guest Log: BIOS: Booting from Hard Disk...
2025-10-29 18:26:18 (106856): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-10-29 18:26:18 (106856): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-10-29 18:26:18 (106856): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-10-29 18:26:18 (106856): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-10-29 18:26:18 (106856): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-10-29 18:26:18 (106856): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-10-29 18:26:18 (106856): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-10-29 18:26:18 (106856): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-10-29 18:26:18 (106856): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-10-29 18:26:18 (106856): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-10-29 18:26:18 (106856): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-10-29 18:26:18 (106856): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-10-29 18:26:18 (106856): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-10-29 18:26:18 (106856): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-10-29 18:26:18 (106856): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-10-29 18:26:18 (106856): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-10-29 18:26:18 (106856): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-10-29 18:26:18 (106856): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-10-29 18:26:18 (106856): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-10-29 18:26:18 (106856): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-10-29 18:26:18 (106856): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-10-29 18:26:18 (106856): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-10-29 18:26:18 (106856): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-10-29 18:26:18 (106856): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-10-29 18:26:18 (106856): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-10-29 18:26:18 (106856): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-10-29 18:26:18 (106856): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-10-29 18:26:18 (106856): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-10-29 18:26:18 (106856): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-10-29 18:26:18 (106856): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-10-29 18:26:18 (106856): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-10-29 18:26:18 (106856): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-10-29 18:26:44 (106856): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-10-29 18:26:44 (106856): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0000000 (size 0x400000)
2025-10-29 18:27:36 (106856): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-10-29 18:27:36 (106856): Guest Log: 00:00:00.003351 main     Log opened 2025-10-29T18:27:33.864553000Z
2025-10-29 18:27:36 (106856): Guest Log: 00:00:00.005640 main     OS Product: Linux
2025-10-29 18:27:36 (106856): Guest Log: 00:00:00.006885 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-10-29 18:27:36 (106856): Guest Log: 00:00:00.007752 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-10-29 18:27:36 (106856): Guest Log: 00:00:00.008573 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-10-29 18:27:36 (106856): Guest Log: 00:00:00.008717 main     Process ID: 1315
2025-10-29 18:27:36 (106856): Guest Log: 00:00:00.008730 main     Package type: LINUX_64BITS_GENERIC
2025-10-29 18:27:36 (106856): Guest Log: 00:00:00.030950 main     5.2.32 r132073 started. Verbose level = 0
2025-10-29 18:27:37 (106856): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-10-29 18:27:37 (106856): Guest Log: [INFO] Mounting shared directory
2025-10-29 18:27:37 (106856): Guest Log: [INFO] Checking for init_data.xml
2025-10-29 18:27:43 (106856): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-10-29 18:27:43 (106856): Guest Log: [INFO] Detected branch: prod
2025-10-29 18:27:44 (106856): Guest Log: This is the prod version of the ATLAS job wrapper
2025-10-29 18:27:44 (106856): Guest Log: Copying input files
2025-10-29 18:27:46 (106856): Guest Log: 00:00:10.061938 timesync vgsvcTimeSyncWorker: Radical guest time change: 14 411 653 498 000ns (GuestNow=1 761 776 865 574 199 000 ns GuestLast=1 761 762 453 920 701 000 ns fSetTimeLastLoop=true )
2025-10-29 18:27:52 (106856): Guest Log: Copied input files into RunAtlas.
2025-10-29 18:27:52 (106856): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-10-29 18:27:52 (106856): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-10-29 18:27:52 (106856): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-10-29 18:27:52 (106856): Guest Log: Further information can be found at the LHC@home message board.
2025-10-29 18:28:07 (106856): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-10-29 18:28:08 (106856): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-10-29 18:28:08 (106856): Guest Log: 2.6.3.0 1596 0 32324 152280 4 1 3120538 4096000 0 65024 0 0 n/a 1292 1027 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-10-29 18:28:16 (106856): Guest Log: copied the webapp to /var/www
2025-10-29 18:28:16 (106856): Guest Log: ATHENA_PROC_NUMBER=4
2025-10-29 18:28:16 (106856): Guest Log: ATHENA_CORE_NUMBER=4
2025-10-29 18:28:16 (106856): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-10-29 18:28:16 (106856): Guest Log:  *** Starting ATLAS job. (PandaID=6864766956 taskID=47081490) ***
2025-10-29 20:12:30 (106856): Status Report: Elapsed Time: '6000.192097'
2025-10-29 20:12:30 (106856): Status Report: CPU Time: '20495.781250'
2025-10-29 21:57:31 (106856): Status Report: Elapsed Time: '12003.545012'
2025-10-29 21:57:31 (106856): Status Report: CPU Time: '44942.765625'
2025-10-29 22:44:45 (106856): Guest Log:  *** Job finished ***
2025-10-29 22:44:45 (106856): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-10-29 22:44:45 (106856): Guest Log: 2025-10-30 02:44:34,194 | INFO     | all workflow threads have been joined
2025-10-29 22:44:45 (106856): Guest Log: 2025-10-30 02:44:34,196 | INFO     | end of generic workflow (traces error code: 0)
2025-10-29 22:44:45 (106856): Guest Log: 2025-10-30 02:44:34,197 | INFO     | traces error code: 0
2025-10-29 22:44:45 (106856): Guest Log: 2025-10-30 02:44:34,199 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-10-29 22:44:45 (106856): Guest Log: 2025-10-30 02:44:41,093 | INFO     | PID=6008 has CPU usage=4.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -j managed --pilot-user ATLAS --harvester-submit-mode PUSH -w generic --job-type managed --resource-type MCORE -z -t
2025-10-29 22:44:45 (106856): Guest Log: 2025-10-30 02:44:41,094 | INFO     | found 0 job(s) in 20 queues
2025-10-29 22:44:45 (106856): Guest Log: 2025-10-30 02:44:41,095 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2025-10-29 22:44:45 (106856): Guest Log: 2025-10-30 02:44:41,095 | WARNING  | will wait for a maximum of 300 s for threads to finish
2025-10-29 22:44:45 (106856): Guest Log: 2025-10-30 02:44:41,095 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-10-29 22:44:45 (106856): Guest Log: 2025-10-30 02:44:41,095 | INFO     | [monitor] control thread has ended
2025-10-29 22:44:45 (106856): Guest Log: 2025-10-30 02:44:41,577 [wrapper] ==== pilot stdout END ====
2025-10-29 22:44:45 (106856): Guest Log: 2025-10-30 02:44:41,586 [wrapper] ==== wrapper stdout RESUME ====
2025-10-29 22:44:45 (106856): Guest Log: 2025-10-30 02:44:41,594 [wrapper] pilotpid: 6008
2025-10-29 22:44:45 (106856): Guest Log: 2025-10-30 02:44:41,602 [wrapper] Pilot exit status: 0
2025-10-29 22:44:45 (106856): Guest Log: 2025-10-30 02:44:41,848 [wrapper] pandaids: 6864766956
2025-10-29 22:44:45 (106856): Guest Log: 2025-10-30 02:44:41,929 [wrapper] cleanup supervisor_pilot 16786 6009
2025-10-29 22:44:45 (106856): Guest Log: 2025-10-30 02:44:41,966 [wrapper] Test setup, not cleaning
2025-10-29 22:44:45 (106856): Guest Log: 2025-10-30 02:44:42,067 [wrapper] apfmon messages muted
2025-10-29 22:44:45 (106856): Guest Log: 2025-10-30 02:44:42,088 [wrapper] ==== wrapper stdout END ====
2025-10-29 22:44:45 (106856): Guest Log: 2025-10-30 02:44:42,114 [wrapper] ==== wrapper stderr END ====
2025-10-29 22:44:45 (106856): Guest Log:  *** Error codes and diagnostics ***
2025-10-29 22:44:45 (106856): Guest Log:     "exeErrorCode": 0,
2025-10-29 22:44:45 (106856): Guest Log:     "exeErrorDiag": "",
2025-10-29 22:44:45 (106856): Guest Log:     "pilotErrorCode": 0,
2025-10-29 22:44:45 (106856): Guest Log:     "pilotErrorDiag": "",
2025-10-29 22:44:45 (106856): Guest Log:  *** Listing of results directory ***
2025-10-29 22:44:45 (106856): Guest Log: total 186244
2025-10-29 22:44:45 (106856): Guest Log: -rw-r--r--. 1 atlas atlas    557409 Oct 29 13:30 pilot3.tar.gz
2025-10-29 22:44:45 (106856): Guest Log: -rw-r--r--. 1 atlas atlas      5112 Oct 29 13:36 queuedata.json
2025-10-29 22:44:45 (106856): Guest Log: -rwx------. 1 atlas atlas     36292 Oct 29 13:37 runpilot2-wrapper.sh
2025-10-29 22:44:45 (106856): Guest Log: -rwxr-xr-x. 1 atlas atlas      7948 Oct 29 22:27 init_data.xml
2025-10-29 22:44:45 (106856): Guest Log: -rwxr-xr-x. 1 atlas atlas    569674 Oct 29 22:27 input.tar.gz
2025-10-29 22:44:45 (106856): Guest Log: -rwxr-xr-x. 1 atlas atlas     15120 Oct 29 22:27 start_atlas.sh
2025-10-29 22:44:45 (106856): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Oct 29 22:27 EVNT.47081487._000736.pool.root.1 -> /data/./ATLAS.root_0
2025-10-29 22:44:45 (106856): Guest Log: -rw-r--r--. 1 atlas atlas      2526 Oct 29 22:28 pandaJob.out
2025-10-29 22:44:45 (106856): Guest Log: -rw-------. 1 atlas atlas    987206 Oct 29 22:30 agis_schedconf.cvmfs.json
2025-10-29 22:44:45 (106856): Guest Log: drwx------. 5 atlas atlas      4096 Oct 29 22:30 pilot3
2025-10-29 22:44:45 (106856): Guest Log: -rw-------. 1 atlas atlas 182035718 Oct 30 02:42 HITS.47081490._018419.pool.root.1
2025-10-29 22:44:45 (106856): Guest Log: -rw-------. 1 atlas atlas      1032 Oct 30 02:43 memory_monitor_summary.json
2025-10-29 22:44:45 (106856): Guest Log: -rw-------. 1 atlas atlas   1560632 Oct 30 02:43 agis_ddmendpoints.agis.ALL.json
2025-10-29 22:44:45 (106856): Guest Log: -rw-------. 1 atlas atlas    413821 Oct 30 02:43 log.47081490._018419.job.log.tgz.1
2025-10-29 22:44:45 (106856): Guest Log: -rw-------. 1 atlas atlas      7820 Oct 30 02:44 heartbeat.json
2025-10-29 22:44:45 (106856): Guest Log: -rw-------. 1 atlas atlas        95 Oct 30 02:44 pilot_heartbeat.json
2025-10-29 22:44:45 (106856): Guest Log: -rw-------. 1 atlas atlas       744 Oct 30 02:44 pilotlog.txt
2025-10-29 22:44:45 (106856): Guest Log: -rw-------. 1 atlas atlas   2004418 Oct 30 02:44 log.47081490._018419.job.log.1
2025-10-29 22:44:45 (106856): Guest Log: -rw-------. 1 atlas atlas       357 Oct 30 02:44 output.list
2025-10-29 22:44:45 (106856): Guest Log: -rw-r--r--. 1 atlas atlas       620 Oct 30 02:44 runtime_log
2025-10-29 22:44:45 (106856): Guest Log: -rw-------. 1 atlas atlas   2437120 Oct 30 02:44 result.tar.gz
2025-10-29 22:44:45 (106856): Guest Log: -rw-r--r--. 1 atlas atlas      8664 Oct 30 02:44 runtime_log.err
2025-10-29 22:44:45 (106856): Guest Log: -rw-------. 1 atlas atlas       666 Oct 30 02:44 6BOKDmUXLY8n9Rq4apOajLDm4fhM0noT9bVof3QYDmPPpMDm04SpXo.diag
2025-10-29 22:44:45 (106856): Guest Log: Looking for outputfile HITS.47081490._018419.pool.root.1
2025-10-29 22:44:45 (106856): Guest Log: HITS file was successfully produced
2025-10-29 22:44:45 (106856): Guest Log: -rw-------. 1 atlas atlas 182035718 Oct 30 02:42 /home/atlas/RunAtlas/HITS.47081490._018419.pool.root.1
2025-10-29 22:44:49 (106856): Guest Log: Successfully finished the ATLAS job!
2025-10-29 22:44:49 (106856): Guest Log: Copying the results back to the shared directory!
2025-10-29 22:44:49 (106856): Guest Log:  *** Contents of shared directory: ***
2025-10-29 22:44:50 (106856): Guest Log: total 390912
2025-10-29 22:44:50 (106856): Guest Log: -rwxrwxrwx. 1 root root 215216329 Oct 29 22:25 ATLAS.root_0
2025-10-29 22:44:50 (106856): Guest Log: -rwxrwxrwx. 1 root root 182035718 Oct 30 02:44 HITS.pool.root.1
2025-10-29 22:44:50 (106856): Guest Log: -rwxrwxrwx. 1 root root      7948 Oct 29 22:25 init_data.xml
2025-10-29 22:44:50 (106856): Guest Log: -rwxrwxrwx. 1 root root    569674 Oct 29 14:31 input.tar.gz
2025-10-29 22:44:50 (106856): Guest Log: -rwxrwxrwx. 1 root root   2437120 Oct 30 02:44 result.tar.gz
2025-10-29 22:44:50 (106856): Guest Log: -rwxrwxrwx. 1 root root     15120 Oct 29 14:31 start_atlas.sh
2025-10-29 22:44:50 (106856): Guest Log:  *** Success! Shutting down the machine. ***
2025-10-29 22:44:50 (106856): VM Completion File Detected.
2025-10-29 22:44:50 (106856): Powering off VM.
2025-10-29 22:44:59 (106856): Successfully stopped VM.
2025-10-29 22:44:59 (106856): Deregistering VM. (boinc_7f232b85eb22aa63, slot#3)
2025-10-29 22:45:00 (106856): Removing network bandwidth throttle group from VM.
2025-10-29 22:45:01 (106856): Removing VM from VirtualBox.
2025-10-29 22:45:09 (106856): called boinc_finish(0)

</stderr_txt>
]]>

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